Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000472.1

Orthogroup ID

OG0003773

Physical Location & Seq

Genomic Coordinates Reverse (-)

26643 .. 33604

Gene Structure 6962 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000472.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

atggcgaccttagtgagctcggcaggtggtctacttgccatgctgaacgagtcccgtccagagctaaagctctacgctttgtccaacctcaacaaattggttgatgggttttggcccgagatctccaccagcgtccccatcatagaaagtttgtatgaagatgaagagtttggtcagcatcaaagacaactggctgcattgcttgtttcaaaggttttctactatttgggtgaacttaatgactcactgtcttacgcccttggagctggatccttatttgacgtgtcagaagattcttattatattcatactcttcttgctaaagctatagatgagtatgccagtcttaagtctaaggcagcagaatcaaatgctgaagcagcaaatgtggatcctaggttggaggctatcgtggagagaatgctgaataagtgtatcctggatgggaaatatcaacaagctatggggattgcaattgaatgtcgaagactggataaacttgaggaagcaatcataaagagtgataatgttcaaggaaccctgtcatattgcatcaatgtctctcattcatatattaatcttagagaatacagacgtgaggtgcttcgtcttcttgtcagagtgtatcaaaagctgccttctccagattacttgagcatttgtcagtgtctcatgtttttggatgaaccagaaggtgttgcaaccatattggagaagctcctgcgctctgaaaacaaggaagatgcacttttggcatttcaaatagcctttgacctcgttgagaatgagcaccaagcttttctcttaaatgtaagaaatcgccttccagctcccaagactaaaacctcagagccagtgcaaccagaatccagtgaagctgcacaaaatgaaggttctgctccgggggatgttcaaatgacagatggaagttctactaccagtgtgactgtgcctgaagatccaagtgaagtgatgtattccgagagactgacaaaaatcaaaggaattttgtccggagagacgtcgataaagttgaccttacaatttctgtacagccataacaagtccgatctgcttattctgaagacaataaagcagtctgttgagatgagaaatagtgtatgccatagtgcaacaatttatgctaatgcaattatgcacgctggaacaactgtggatacatttctgagggagaatctggactggttaagcagagccactaattgggcaaaattcagtgcaacagcggggctaggtgttattcacagaggccacttgcagcagggaagatctctgatggcaccttacttgcctcagggtggggctggtggtggtggaagtccgtactcggaaggtggtgctctgtatgctctgggactcattcatgccaaccatggcgagggcatcaaacagttccttcgtgatagcctacgcagtactaatgtggaggttattcaacatggggcgtgcttgggtcttggcttgtcagctttaggaactgctgatgaagagatttatgatgacattaaaagtgtgctgtatactgacagtgccgttgctggtgaagcagctggtattagtatgggtttactcatggttggaactgcaagtgagaaggctagtgaaatgcttgcatatgcacatgagacacaacacgaaaagatcatcagagggttggcattggggattgccctgacggtatatggaagagaagaggaagcagacacgctaattgaacagatgacaagagatcaagaccccatattgcgttatggtggtatgtatgcattggcattggcctatagcgggacagcaaacaacaaagctattcgtcagctgctgcattttgctgtgtcagatgtgagtgatgatgttaggagaactgctgttctagcccttggttttgtcttgtactctgagccagagcagacgcctcgtattgtctccctgctatctgagtcctacaacccacatgttcgatatggtgctgctcttgctgtaggaatttcgtgtgctggtactggcttgagtgaggccatatcattgttagagcctctgacttcagatgttgttgattttgtgcgccaaggtgccctcattgcaatggctatggtcatggtccagattagtgaagctactttgataggattgaactatgaccttaaagttccgaagtttcagttcctgtcatatgcaaaaccttctctgtttgaatatcctaaaccgaccactgtggcaaccactacatcggccgtgaaactccccactgctgttctgtcaacatcagcaaaggccaccaaagctagggccaagaaagaagctgcagatcagaaggccaatcctgaaaagacaaatcctgggggagagacatcttcaggaaagggaaaatcttctagtgagaaagattgggattcaatgcaggttgatagctcaacagagaagaaatcagaacctgaaccggcttttgagtttttgaccaacccagctagggtggttcctgctcaggaggaatacattaagtttctggaagagagcagatatgtgcctgtcaagctagcaccatcaggatttgttctcttgagagaccaaagacctactgaaccagaagtgctctcacttacggatacaccctcatctacagtgtcacctgctggtggatcagcaactggacagccaggatctgcatcggccatggcagttgatgaagaacctcaacctcctcagccttttgagtacaccgtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0019538 GO:0019941 GO:0022624 GO:0030163 GO:0031597 GO:0032991 GO:0034515 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0051603 GO:0071704 GO:0071944 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PC_rep

Protein Analysis

914

Amino Acids

99.24

Weight (kDa)

5.05

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003773)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04810 AT2G32730
fragaria_vesca	FvH4_4g00680
malus_domestica	MD04G1006300.v1.1 MD08G1218500.v1.1 MD08G1218600.v1.1 MD15G1407100.v1.1
prunus_persica	Prupe.1G006500_v2.0.a1 Prupe.1G006500_v2.0.a1 Prupe.1G554900_v2.0.a1
pyrus_communis	pycom04g00570 pycom08g18930 pycom15g36330
rosa_chinensis	RchiOBHm_Chr4g0386391 RchiOBHm_Chr6g0269091 RchiOBHm_Chr6g0269101 RchiOBHm_Chr6g0269111
rosa_laevigata	RLG00000010168 RLG00000013884
rosa_multiflora	Rmu_co8360047.1_g000001 Rmu_sc0000472.1_g000007 Rmu_sc0002413.1_g000010
rosa_roxburghii	Rroxscaffold_5G00333870
rosa_rugosa	Rorug03G0197200 Rorug03G0306500 Rorug06G0044800
rosa_samantha	Rh3BG283800 Rh4AG010900 Rh4BG008300 Rh4DG009100 Rh6CG164400 Rh6CG164500 Rh6DG156000
rosa_wichuraiana	Rw4G000090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	14, 2656
AatII	GACGTC	1 cut(s)	1025
Acc36I	ACCTGC	3 cut(s)	14, 2410, 2656
AccB1I	GGYRCC	2 cut(s)	1300, 2090
AccB7I	CCANNNNNTGG	1 cut(s)	1224
AccI	GTMKAC	2 cut(s)	31, 1541
AccIII	TCCGGA	1 cut(s)	1013
AciI	CCGC	2 cut(s)	1247, 1806
AclWI	GGATC	7 cut(s)	264, 277, 386, 399, 953, 2665, 2686
AcoI	YGGCCR	2 cut(s)	2250, 2688
AcsI	RAATTY	3 cut(s)	1005, 1232, 2004
AcuI	CTGAAG	5 cut(s)	396, 975, 1103, 2046, 2358
AcyI	GRCGYC	2 cut(s)	1022, 1931
AdeI	CACNNNGTG	1 cut(s)	2742
AfaI	GTAC	6 cut(s)	1052, 1346, 1438, 1913, 2020, 2735
AfiI	CCNNNNNNNGG	7 cut(s)	1224, 1319, 1399, 1806, 2304, 2488, 2654
AflII	CTTAAG	1 cut(s)	347
AflIII	ACRYGT	2 cut(s)	282, 1972
AhdI	GACNNNNNGTC	1 cut(s)	247
AjiI	CACGTC	2 cut(s)	283, 596
AjnI	CCWGG	3 cut(s)	438, 2356, 2674
Alw21I	GWGCWC	4 cut(s)	20, 792, 1363, 2613
Alw26I	GTCTC	8 cut(s)	565, 674, 979, 1013, 1640, 1948, 2360, 2577
AlwI	GGATC	7 cut(s)	264, 277, 386, 399, 953, 2665, 2686
AlwNI	CAGNNNCTG	5 cut(s)	1840, 2185, 2453, 2666, 2681
Ama87I	CYCGRG	1 cut(s)	116
Aor13HI	TCCGGA	1 cut(s)	1013
AoxI	GGCC	9 cut(s)	113, 1270, 1797, 2034, 2250, 2292, 2307, 2334, 2688
ApoI	RAATTY	3 cut(s)	1005, 1232, 2004
AseI	ATTAAT	1 cut(s)	576
Asp700I	GAANNNNTTC	1 cut(s)	2389
AspA2I	CCTAGG	1 cut(s)	395
AspLEI	GCGC	2 cut(s)	726, 2085
AspS9I	GGNCC	3 cut(s)	114, 2119, 2307
AsuC2I	CCSGG	1 cut(s)	903
AsuHPI	GGTGA	3 cut(s)	242, 1574, 2637
AsuNHI	GCTAGC	1 cut(s)	2554
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	1 cut(s)	2119
AvrII	CCTAGG	1 cut(s)	395
AxyI	CCTNAGG	1 cut(s)	1314
BaeGI	GKGCMC	1 cut(s)	2095
BamHI	GGATCC	2 cut(s)	269, 391
BanI	GGYRCC	2 cut(s)	1300, 2090
BanII	GRGCYC	1 cut(s)	20
BarI	GAAGNNNNNNTAC	2 cut(s)	919, 951
BbsI	GAAGAC	3 cut(s)	493, 602, 1091
Bbv12I	GWGCWC	4 cut(s)	20, 792, 1363, 2613
BbvCI	CCTCAGC	1 cut(s)	2721
BccI	CCATC	6 cut(s)	98, 146, 437, 917, 1291, 2569
BceAI	ACGGC	2 cut(s)	1538, 2237
BcgI	CGANNNNNNTGC	2 cut(s)	1916, 1950
BciT130I	CCWGG	3 cut(s)	440, 2358, 2676
BciVI	GTATCC	3 cut(s)	446, 1171, 2617
BcnI	CCSGG	1 cut(s)	903
BcoDI	GTCTC	8 cut(s)	565, 674, 979, 1013, 1640, 1948, 2360, 2577
BfaI	CTAG	8 cut(s)	396, 1253, 1620, 1892, 2304, 2394, 2487, 2555
BfmI	CTRYAG	5 cut(s)	327, 1801, 1998, 2322, 2637
BfrI	CTTAAG	1 cut(s)	347
BfuAI	ACCTGC	3 cut(s)	14, 2410, 2656
BfuI	GTATCC	3 cut(s)	446, 1171, 2617
BglII	AGATCT	2 cut(s)	120, 1289
BlnI	CCTAGG	1 cut(s)	395
BmcAI	AGTACT	1 cut(s)	1438
Bme1390I	CCNGG	4 cut(s)	440, 903, 2358, 2676
Bme18I	GGWCC	1 cut(s)	2119
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmeT110I	CYCGRG	1 cut(s)	116
BmgBI	CACGTC	2 cut(s)	283, 596
BmgT120I	GGNCC	3 cut(s)	114, 2119, 2307
BmiI	GGNNCC	6 cut(s)	271, 393, 538, 1302, 2092, 2496
BmrFI	CCNGG	4 cut(s)	440, 903, 2358, 2676
BmsI	GCATC	5 cut(s)	187, 561, 733, 1413, 2693
BmtI	GCTAGC	1 cut(s)	2558
BpiI	GAAGAC	3 cut(s)	493, 602, 1091
BpmI	CTGGAG	1 cut(s)	627
Bpu10I	CCTNAGC	2 cut(s)	2502, 2721
BpuEI	CTTGAG	4 cut(s)	521, 673, 2047, 2599
BpuMI	CCSGG	1 cut(s)	903
BsaBI	GATNNNNATC	1 cut(s)	2683
BsaHI	GRCGYC	2 cut(s)	1022, 1931
BsaI	GGTCTC	1 cut(s)	2577
BsaJI	CCNNGG	8 cut(s)	259, 395, 902, 1393, 1897, 2086, 2357, 2691
BsaWI	WCCGGW	1 cut(s)	1013
Bsc4I	CCNNNNNNNGG	7 cut(s)	1224, 1319, 1399, 1806, 2304, 2488, 2654
Bse118I	RCCGGY	1 cut(s)	2458
Bse1I	ACTGG	9 cut(s)	195, 342, 495, 854, 870, 939, 1208, 2026, 2671
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	3 cut(s)	197, 2097, 2109
Bse8I	GATNNNNATC	1 cut(s)	2683
BseAI	TCCGGA	1 cut(s)	1013
BseBI	CCWGG	3 cut(s)	440, 2358, 2676
BseDI	CCNNGG	8 cut(s)	259, 395, 902, 1393, 1897, 2086, 2357, 2691
BseGI	GGATG	3 cut(s)	448, 688, 913
BseJI	GATNNNNATC	1 cut(s)	2683
BseLI	CCNNNNNNNGG	7 cut(s)	1224, 1319, 1399, 1806, 2304, 2488, 2654
BseMI	GCAATG	3 cut(s)	197, 2097, 2109
BseMII	CTCAG	7 cut(s)	861, 1178, 1328, 1908, 1947, 2516, 2735
BseNI	ACTGG	9 cut(s)	195, 342, 495, 854, 870, 939, 1208, 2026, 2671
BseRI	GAGGAG	1 cut(s)	2709
BseSI	GKGCMC	1 cut(s)	2095
BseX3I	CGGCCG	1 cut(s)	2250
BseYI	CCCAGC	1 cut(s)	2482
BsgI	GTGCAG	1 cut(s)	864
Bsh1285I	CGRYCG	1 cut(s)	2253
BshFI	GGCC	9 cut(s)	115, 1272, 1799, 2036, 2252, 2294, 2309, 2336, 2690
BshNI	GGYRCC	2 cut(s)	1300, 2090
BsiEI	CGRYCG	1 cut(s)	2253
BsiHKAI	GWGCWC	4 cut(s)	20, 792, 1363, 2613
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	3 cut(s)	902, 1014, 2459
BslFI	GGGAC	4 cut(s)	37, 119, 1389, 1822
BslI	CCNNNNNNNGG	7 cut(s)	1224, 1319, 1399, 1806, 2304, 2488, 2654
BsmAI	GTCTC	8 cut(s)	565, 674, 979, 1013, 1640, 1948, 2360, 2577
BsmBI	CGTCTC	1 cut(s)	1013
BsmFI	GGGAC	4 cut(s)	37, 119, 1389, 1822
BsmI	GAATGC	1 cut(s)	426
BsnI	GGCC	9 cut(s)	115, 1272, 1799, 2036, 2252, 2294, 2309, 2336, 2690
Bso31I	GGTCTC	1 cut(s)	2577
BsoBI	CYCGRG	1 cut(s)	116
Bsp1286I	GDGCHC	5 cut(s)	20, 792, 1363, 2095, 2613
Bsp13I	TCCGGA	1 cut(s)	1013
Bsp1407I	TGTACA	1 cut(s)	1050
Bsp19I	CCATGG	2 cut(s)	1393, 2691
BspACI	CCGC	2 cut(s)	1247, 1806
BspANI	GGCC	9 cut(s)	115, 1272, 1799, 2036, 2252, 2294, 2309, 2336, 2690
BspCNI	CTCAG	7 cut(s)	860, 1179, 1327, 1909, 1948, 2515, 2734
BspEI	TCCGGA	1 cut(s)	1013
BspLI	GGNNCC	6 cut(s)	271, 393, 538, 1302, 2092, 2496
BspMAI	CTGCAG	1 cut(s)	2326
BspMI	ACCTGC	3 cut(s)	14, 2410, 2656
BspOI	GCTAGC	1 cut(s)	2558
BspPI	GGATC	7 cut(s)	264, 277, 386, 399, 953, 2665, 2686
BspT107I	GGYRCC	2 cut(s)	1300, 2090
BspTI	CTTAAG	1 cut(s)	347
BspTNI	GGTCTC	1 cut(s)	2577
BsrDI	GCAATG	3 cut(s)	197, 2097, 2109
BsrFI	RCCGGY	1 cut(s)	2458
BsrGI	TGTACA	1 cut(s)	1050
BsrI	ACTGG	9 cut(s)	195, 342, 495, 854, 870, 939, 1208, 2026, 2671
BssAI	RCCGGY	1 cut(s)	2458
BssECI	CCNNGG	8 cut(s)	259, 395, 902, 1393, 1897, 2086, 2357, 2691
BssNAI	GTATAC	1 cut(s)	1542
BssNI	GRCGYC	2 cut(s)	1022, 1931
BssT1I	CCWWGG	6 cut(s)	259, 395, 1393, 1897, 2086, 2691
Bst1107I	GTATAC	1 cut(s)	1542
Bst2UI	CCWGG	3 cut(s)	440, 2358, 2676
Bst4CI	ACNGT	9 cut(s)	249, 949, 1174, 1413, 1550, 1699, 2233, 2641, 2740
Bst6I	CTCTTC	6 cut(s)	159, 318, 1503, 1702, 1707, 2523
BstACI	GRCGYC	2 cut(s)	1022, 1931
BstAFI	CTTAAG	1 cut(s)	347
BstAUI	TGTACA	1 cut(s)	1050
BstC8I	GCNNGC	4 cut(s)	1161, 1468, 1632, 2556
BstDSI	CCRYGG	2 cut(s)	1393, 2691
BstF5I	GGATG	3 cut(s)	448, 688, 913
BstHHI	GCGC	2 cut(s)	726, 2085
BstMAI	GTCTC	8 cut(s)	565, 674, 979, 1013, 1640, 1948, 2360, 2577
BstMCI	CGRYCG	1 cut(s)	2253
BstNI	CCWGG	3 cut(s)	440, 2358, 2676
BstNSI	RCATGY	1 cut(s)	1976
BstSCI	CCNGG	4 cut(s)	438, 901, 2356, 2674
BstSFI	CTRYAG	5 cut(s)	327, 1801, 1998, 2322, 2637
BstSLI	GKGCMC	1 cut(s)	2095
BstV2I	GAAGAC	3 cut(s)	493, 602, 1091
BstX2I	RGATCY	6 cut(s)	120, 269, 391, 958, 1289, 2678
BstYI	RGATCY	6 cut(s)	120, 269, 391, 958, 1289, 2678
BstZ17I	GTATAC	1 cut(s)	1542
BstZI	CGGCCG	1 cut(s)	2250
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuI	GTATCC	3 cut(s)	446, 1171, 2617
BsuRI	GGCC	9 cut(s)	115, 1272, 1799, 2036, 2252, 2294, 2309, 2336, 2690
BtgI	CCRYGG	2 cut(s)	1393, 2691
BtrI	CACGTC	2 cut(s)	283, 596
BtsCI	GGATG	3 cut(s)	448, 688, 913
BtsI	GCAGTG	1 cut(s)	2265
BveI	ACCTGC	3 cut(s)	14, 2410, 2656
Cac8I	GCNNGC	4 cut(s)	1161, 1468, 1632, 2556
CaiI	CAGNNNCTG	5 cut(s)	1840, 2185, 2453, 2666, 2681
CfoI	GCGC	2 cut(s)	726, 2085
Cfr10I	RCCGGY	1 cut(s)	2458
Cfr13I	GGNCC	3 cut(s)	114, 2119, 2307
CseI	GACGC	2 cut(s)	121, 1939
Csp6I	GTAC	6 cut(s)	1051, 1345, 1437, 1912, 2019, 2734
CviQI	GTAC	6 cut(s)	1051, 1345, 1437, 1912, 2019, 2734
DraIII	CACNNNGTG	1 cut(s)	2742
DriI	GACNNNNNGTC	1 cut(s)	247
EaeI	YGGCCR	2 cut(s)	2250, 2688
EagI	CGGCCG	1 cut(s)	2250
Eam1104I	CTCTTC	6 cut(s)	159, 318, 1503, 1702, 1707, 2523
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EarI	CTCTTC	6 cut(s)	159, 318, 1503, 1702, 1707, 2523
Ecl136II	GAGCTC	1 cut(s)	18
EclXI	CGGCCG	1 cut(s)	2250
Eco130I	CCWWGG	6 cut(s)	259, 395, 1393, 1897, 2086, 2691
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	2577
Eco47I	GGWCC	1 cut(s)	2119
Eco52I	CGGCCG	1 cut(s)	2250
Eco53kI	GAGCTC	1 cut(s)	18
Eco57I	CTGAAG	5 cut(s)	396, 975, 1103, 2046, 2358
Eco81I	CCTNAGG	1 cut(s)	1314
Eco88I	CYCGRG	1 cut(s)	116
EcoICRI	GAGCTC	1 cut(s)	18
EcoRII	CCWGG	3 cut(s)	438, 2356, 2674
EcoT14I	CCWWGG	6 cut(s)	259, 395, 1393, 1897, 2086, 2691
EcoT22I	ATGCAT	1 cut(s)	1789
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	6 cut(s)	259, 395, 1393, 1897, 2086, 2691
Esp3I	CGTCTC	1 cut(s)	1013
FalI	AAGNNNNNCTT	4 cut(s)	732, 764, 1022, 1054
FaqI	GGGAC	4 cut(s)	37, 119, 1389, 1822
FauI	CCCGC	2 cut(s)	1240, 1799
FauNDI	CATATG	2 cut(s)	1636, 2191
FblI	GTMKAC	2 cut(s)	31, 1541
FokI	GGATG	3 cut(s)	455, 695, 920
FriOI	GRGCYC	1 cut(s)	20
FspBI	CTAG	8 cut(s)	396, 1253, 1620, 1892, 2304, 2394, 2487, 2555
GlaI	GCGC	2 cut(s)	725, 2084
GsaI	CCCAGC	1 cut(s)	2486
GsuI	CTGGAG	1 cut(s)	627
HaeIII	GGCC	9 cut(s)	115, 1272, 1799, 2036, 2252, 2294, 2309, 2336, 2690
HapII	CCGG	3 cut(s)	902, 1014, 2459
HgaI	GACGC	2 cut(s)	121, 1939
HhaI	GCGC	2 cut(s)	726, 2085
Hin1I	GRCGYC	2 cut(s)	1022, 1931
Hin6I	GCGC	2 cut(s)	724, 2083
HinP1I	GCGC	2 cut(s)	724, 2083
HincII	GTYRAC	2 cut(s)	1035, 2280
HindII	GTYRAC	2 cut(s)	1035, 2280
HindIII	AAGCTT	1 cut(s)	795
HinfI	GANTC	9 cut(s)	50, 242, 293, 365, 866, 1195, 1377, 1958, 2411
HpaII	CCGG	3 cut(s)	902, 1014, 2459
HphI	GGTGA	3 cut(s)	242, 1574, 2637
Hpy166II	GTNNAC	7 cut(s)	32, 233, 1035, 1542, 1589, 2280, 2736
Hpy8I	GTNNAC	7 cut(s)	32, 233, 1035, 1542, 1589, 2280, 2736
Hpy99I	CGWCG	1 cut(s)	1027
HpyAV	CCTTC	9 cut(s)	648, 686, 833, 884, 1346, 1427, 1609, 2211, 2326
HpyCH4III	ACNGT	9 cut(s)	249, 949, 1174, 1413, 1550, 1699, 2233, 2641, 2740
HpyCH4IV	ACGT	3 cut(s)	282, 595, 1022
HpySE526I	ACGT	3 cut(s)	282, 595, 1022
Hsp92I	GRCGYC	2 cut(s)	1022, 1931
HspAI	GCGC	2 cut(s)	724, 2083
Kpn2I	TCCGGA	1 cut(s)	1013
LmnI	GCTCC	4 cut(s)	263, 723, 835, 904
LweI	GCATC	5 cut(s)	187, 561, 733, 1413, 2693
MaeI	CTAG	8 cut(s)	396, 1253, 1620, 1892, 2304, 2394, 2487, 2555
MaeII	ACGT	3 cut(s)	282, 595, 1022
MaeIII	GTNAC	2 cut(s)	943, 2643
MfeI	CAATTG	1 cut(s)	474
MflI	RGATCY	6 cut(s)	120, 269, 391, 958, 1289, 2678
MhlI	GDGCHC	5 cut(s)	20, 792, 1363, 2095, 2613
MlyI	GAGTC	4 cut(s)	59, 236, 1371, 1967
MmeI	TCCRAC	3 cut(s)	108, 381, 1579
Mph1103I	ATGCAT	1 cut(s)	1789
MroI	TCCGGA	1 cut(s)	1013
MroXI	GAANNNNTTC	1 cut(s)	2389
MseI	TTAA	8 cut(s)	237, 348, 576, 806, 1208, 1527, 2163, 2517
MslI	CAYNNNNRTG	1 cut(s)	2102
MspA1I	CMGCKG	3 cut(s)	1247, 1571, 1837
MspCI	CTTAAG	1 cut(s)	347
MspI	CCGG	3 cut(s)	902, 1014, 2459
MspR9I	CCNGG	4 cut(s)	440, 903, 2358, 2676
MunI	CAATTG	1 cut(s)	474
Mva1269I	GAATGC	1 cut(s)	426
MvaI	CCWGG	3 cut(s)	440, 2358, 2676
NciI	CCSGG	1 cut(s)	903
NcoI	CCATGG	2 cut(s)	1393, 2691
NdeI	CATATG	2 cut(s)	1636, 2191
NheI	GCTAGC	1 cut(s)	2554
NlaIV	GGNNCC	6 cut(s)	271, 393, 538, 1302, 2092, 2496
NmuCI	GTSAC	2 cut(s)	943, 2643
NsiI	ATGCAT	1 cut(s)	1789
NspI	RCATGY	1 cut(s)	1976
PaqCI	CACCTGC	2 cut(s)	14, 2656
PciI	ACATGT	1 cut(s)	1972
PctI	GAATGC	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	2389
PfeI	GAWTC	5 cut(s)	293, 365, 866, 1195, 2411
PflMI	CCANNNNNTGG	1 cut(s)	1224
PfoI	TCCNGGA	1 cut(s)	438
PleI	GAGTC	4 cut(s)	58, 236, 1371, 1966
PpsI	GAGTC	4 cut(s)	58, 236, 1371, 1966
PscI	ACATGT	1 cut(s)	1972
PshBI	ATTAAT	1 cut(s)	576
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	3 cut(s)	438, 2356, 2674
PspFI	CCCAGC	1 cut(s)	2482
PspGI	CCWGG	3 cut(s)	438, 2356, 2674
PspN4I	GGNNCC	6 cut(s)	271, 393, 538, 1302, 2092, 2496
PspPI	GGNCC	3 cut(s)	114, 2119, 2307
PstI	CTGCAG	1 cut(s)	2326
PstNI	CAGNNNCTG	5 cut(s)	1840, 2185, 2453, 2666, 2681
PsuI	RGATCY	6 cut(s)	120, 269, 391, 958, 1289, 2678
PvuII	CAGCTG	2 cut(s)	1571, 1837
RsaI	GTAC	6 cut(s)	1052, 1346, 1438, 1913, 2020, 2735
RsaNI	GTAC	6 cut(s)	1051, 1345, 1437, 1912, 2019, 2734
RseI	CAYNNNNRTG	1 cut(s)	2102
SacI	GAGCTC	1 cut(s)	20
SaqAI	TTAA	8 cut(s)	237, 348, 576, 806, 1208, 1527, 2163, 2517
Sau96I	GGNCC	3 cut(s)	114, 2119, 2307
ScaI	AGTACT	1 cut(s)	1438
SchI	GAGTC	4 cut(s)	59, 236, 1371, 1967
ScrFI	CCNGG	4 cut(s)	440, 903, 2358, 2676
SduI	GDGCHC	5 cut(s)	20, 792, 1363, 2095, 2613
SfaNI	GCATC	5 cut(s)	187, 561, 733, 1413, 2693
SfcI	CTRYAG	5 cut(s)	327, 1801, 1998, 2322, 2637
SinI	GGWCC	1 cut(s)	2119
SmiMI	CAYNNNNRTG	1 cut(s)	2102
SmlI	CTYRAG	5 cut(s)	347, 500, 652, 2026, 2578
SmoI	CTYRAG	5 cut(s)	347, 500, 652, 2026, 2578
SsiI	CCGC	2 cut(s)	1247, 1806
SspMI	CTAG	8 cut(s)	396, 1253, 1620, 1892, 2304, 2394, 2487, 2555
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	4 cut(s)	438, 901, 2356, 2674
StyI	CCWWGG	6 cut(s)	259, 395, 1393, 1897, 2086, 2691
TaaI	ACNGT	9 cut(s)	249, 949, 1174, 1413, 1550, 1699, 2233, 2641, 2740
TaiI	ACGT	3 cut(s)	285, 598, 1025
TaqI	TCGA	3 cut(s)	484, 1025, 1978
TatI	WGTACW	4 cut(s)	1050, 1436, 1911, 2733
TfiI	GAWTC	5 cut(s)	293, 365, 866, 1195, 2411
Tru1I	TTAA	8 cut(s)	237, 348, 576, 806, 1208, 1527, 2163, 2517
Tru9I	TTAA	8 cut(s)	237, 348, 576, 806, 1208, 1527, 2163, 2517
TseFI	GTSAC	2 cut(s)	943, 2643
Tsp45I	GTSAC	2 cut(s)	943, 2643
TspDTI	ATGAA	9 cut(s)	171, 177, 296, 558, 699, 903, 1373, 1521, 2718
TspGWI	ACGGA	2 cut(s)	1332, 2636
Van91I	CCANNNNNTGG	1 cut(s)	1224
Vha464I	CTTAAG	1 cut(s)	347
VpaK11BI	GGWCC	1 cut(s)	2119
VspI	ATTAAT	1 cut(s)	576
XapI	RAATTY	3 cut(s)	1005, 1232, 2004
XceI	RCATGY	1 cut(s)	1976
XmaJI	CCTAGG	1 cut(s)	395
XmiI	GTMKAC	2 cut(s)	31, 1541
XmnI	GAANNNNTTC	1 cut(s)	2389
XspI	CTAG	8 cut(s)	396, 1253, 1620, 1892, 2304, 2394, 2487, 2555
ZraI	GACGTC	1 cut(s)	1023
ZrmI	AGTACT	1 cut(s)	1438
Zsp2I	ATGCAT	1 cut(s)	1789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.