Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004653

Physical Location & Seq

Genomic Coordinates Reverse (-)

3396883 .. 3398358

Gene Structure 1476 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G10370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 684 bp

ATGGCAAGCAGCGACGTGAAGCTGATCGGTGCATGGGCGAGTCCCTTTGTGATGAGGCCGAGGATTGCTCTAAACCTCAAGTCTGTCCCCTACGAGTTCCTCCAAGAGACGTTTGGGTCTAAGAGCGAGTTGCTTCTTAAATCAAACCCGGTTCACAAGAAGATCCCGGTTCTGCTTCATGCTGATAAACCGGTGAGTGAGTCCAACATCATCGTTGAGTATATCGATGACACTTGGAGCTCATCTGGACCGTCCATTCTCCCTTCCGATCCTTACGATCGGGCCATGGCTCGGTTCTGGGCTGCTTACATCGACGAAAAGTGGTTTGTCGCTCTAAGAGGTTTCCTAAAAGCCGGAGGAGAAGAAGAGAAGAAAGCTGTGATAGCTCAACTAGAAGAAGGGAATGCGTTTCTGGAGAAGGCGTTCATTGATTGCAGCAAAGGAAAACCGTTCTTCAACGGTGACAACATCGGTTACCTCGACATTGCTCTCGGGTGCTTCTTGGCTTGGTTGAGAGTCACCGAGTTAGCAGTCAGCTATAAAATTCTTGATGAGGCCAAGACACCTTCTTTGTCCAAATGGGCTGAGAATTTCTGTAATGATCCCGCTGTAAAACCTGTCATGCCCGAGACTGCAAAGCTTGCTGAATTCGCAAAGAAGATCTTTCCTAAGCCGCAGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009404 GO:0009407 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009636 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009719 GO:0009725 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010243 GO:0016740 GO:0016765 GO:0019748 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051186 GO:0060416 GO:0065007 GO:0071704 GO:0080134 GO:0080148 GO:0080167 GO:0090696 GO:0098754 GO:0099402 GO:1901564 GO:1901652 GO:1901698 GO:1901700 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

227

Amino Acids

25.31

Weight (kDa)

6.2

Isoelectric Point (pI)

37.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N	PF02798	5 - 76	3.1e-16	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	8 - 78	1.2e-12	Glutathione S-transferase, N-terminal domain
GST_N_2	PF13409	13 - 77	4e-11	Glutathione S-transferase, N-terminal domain
GST_C	PF00043	101 - 202	2.3e-08	Glutathione S-transferase, C-terminal domain
GST_C_2	PF13410	125 - 195	1.6e-06	Glutathione S-transferase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10360 AT1G10370
fragaria_vesca	FvH4_4g35560 FvH4_4g35600
malus_domestica	MD13G1081900.v1.1 MD13G1082000.v1.1 MD13G1082100.v1.1 MD13G1082200.v1.1 MD16G1081100.v1.1
prunus_persica	Prupe.1G264700_v2.0.a1 Prupe.1G264900_v2.0.a1
pyrus_communis	pycom13g07080 pycom16g07010
rosa_chinensis	RchiOBHm_Chr4g0445201 RchiOBHm_Chr5g0060741
rosa_laevigata	RLG00000005757 RLG00000035391
rosa_multiflora	Rmu_co8192854.1_g000001 Rmu_sc0000050.1_g000034 Rmu_sc0006568.1_g000003 Rmu_sc0029476.1_g000002
rosa_roxburghii	Rroxscaffold_5G00385720
rosa_rugosa	Rorug04G0360000 Rorug05G0333500
rosa_samantha	Rh4AG420800 Rh4BG432700 Rh4CG447400 Rh4DG428800 Rh5BG408500 Rh5DG423700
rosa_wichuraiana	Rw4G036090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	115
AciI	CCGC	2 cut(s)	606, 674
AclWI	GGATC	3 cut(s)	157, 263, 596
AcsI	RAATTY	3 cut(s)	543, 589, 647
AfiI	CCNNNNNNNGG	1 cut(s)	291
AgeI	ACCGGT	1 cut(s)	190
AgsI	TTSAA	1 cut(s)	457
AjiI	CACGTC	1 cut(s)	16
AloI	GAACNNNNNNTCC	2 cut(s)	407, 439
AluBI	AGCT	6 cut(s)	22, 240, 377, 386, 537, 640
AluI	AGCT	6 cut(s)	22, 240, 377, 386, 537, 640
Alw21I	GWGCWC	1 cut(s)	242
Alw26I	GTCTC	2 cut(s)	101, 623
AlwI	GGATC	3 cut(s)	157, 263, 596
Ama87I	CYCGRG	2 cut(s)	491, 626
AoxI	GGCC	4 cut(s)	56, 282, 555, 678
ApeKI	GCWGC	3 cut(s)	9, 302, 435
ApoI	RAATTY	3 cut(s)	543, 589, 647
ArsI	GACNNNNNNTTYG	2 cut(s)	553, 585
AsiGI	ACCGGT	1 cut(s)	190
Asp700I	GAANNNNTTC	1 cut(s)	422
AspS9I	GGNCC	2 cut(s)	248, 282
AsuC2I	CCSGG	2 cut(s)	149, 167
AsuHPI	GGTGA	3 cut(s)	205, 473, 511
AvaI	CYCGRG	2 cut(s)	491, 626
AvaII	GGWCC	1 cut(s)	248
BanII	GRGCYC	1 cut(s)	242
Bbv12I	GWGCWC	1 cut(s)	242
BbvI	GCAGC	3 cut(s)	21, 289, 447
BcnI	CCSGG	2 cut(s)	149, 167
BcoDI	GTCTC	2 cut(s)	101, 623
BfaI	CTAG	1 cut(s)	392
BglII	AGATCT	1 cut(s)	660
BisI	GCNGC	4 cut(s)	10, 303, 436, 674
BlsI	GCNGC	4 cut(s)	11, 304, 437, 675
Bme1390I	CCNGG	2 cut(s)	149, 167
Bme18I	GGWCC	1 cut(s)	248
BmeT110I	CYCGRG	2 cut(s)	491, 626
BmgBI	CACGTC	1 cut(s)	16
BmgT120I	GGNCC	2 cut(s)	248, 282
BmrFI	CCNGG	2 cut(s)	149, 167
BplI	GAGNNNNNCTC	2 cut(s)	52, 84
BpmI	CTGGAG	1 cut(s)	434
Bpu10I	CCTNAGC	1 cut(s)	669
BpuEI	CTTGAG	1 cut(s)	62
BpuMI	CCSGG	2 cut(s)	149, 167
Bsa29I	ATCGAT	1 cut(s)	225
BsaJI	CCNNGG	2 cut(s)	59, 285
BsaWI	WCCGGW	1 cut(s)	190
BsaXI	ACNNNNNCTCC	2 cut(s)	407, 437
Bsc4I	CCNNNNNNNGG	1 cut(s)	291
Bse118I	RCCGGY	1 cut(s)	190
Bse3DI	GCAATG	1 cut(s)	483
BseCI	ATCGAT	1 cut(s)	225
BseDI	CCNNGG	2 cut(s)	59, 285
BseLI	CCNNNNNNNGG	1 cut(s)	291
BseMI	GCAATG	1 cut(s)	483
BseMII	CTCAG	1 cut(s)	576
BseRI	GAGGAG	1 cut(s)	372
BseXI	GCAGC	3 cut(s)	21, 289, 447
Bsh1285I	CGRYCG	1 cut(s)	280
BshFI	GGCC	4 cut(s)	58, 284, 557, 680
BshTI	ACCGGT	1 cut(s)	190
BshVI	ATCGAT	1 cut(s)	225
BsiEI	CGRYCG	1 cut(s)	280
BsiHKAI	GWGCWC	1 cut(s)	242
BsiHKCI	CYCGRG	2 cut(s)	491, 626
BsiSI	CCGG	4 cut(s)	149, 167, 191, 354
BslFI	GGGAC	2 cut(s)	27, 71
BslI	CCNNNNNNNGG	1 cut(s)	291
BsmAI	GTCTC	2 cut(s)	101, 623
BsmBI	CGTCTC	1 cut(s)	101
BsmFI	GGGAC	2 cut(s)	27, 71
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	4 cut(s)	58, 284, 557, 680
BsoBI	CYCGRG	2 cut(s)	491, 626
Bsp1286I	GDGCHC	1 cut(s)	242
Bsp143I	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
Bsp19I	CCATGG	1 cut(s)	285
BspACI	CCGC	2 cut(s)	606, 674
BspANI	GGCC	4 cut(s)	58, 284, 557, 680
BspCNI	CTCAG	1 cut(s)	577
BspDI	ATCGAT	1 cut(s)	225
BspPI	GGATC	3 cut(s)	157, 263, 596
BsrDI	GCAATG	1 cut(s)	483
BsrFI	RCCGGY	1 cut(s)	190
BssAI	RCCGGY	1 cut(s)	190
BssECI	CCNNGG	2 cut(s)	59, 285
BssMI	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
BssT1I	CCWWGG	1 cut(s)	285
Bst4CI	ACNGT	3 cut(s)	252, 450, 461
Bst6I	CTCTTC	1 cut(s)	360
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstC8I	GCNNGC	3 cut(s)	7, 642, 678
BstDEI	CTNAG	4 cut(s)	120, 335, 585, 669
BstDSI	CCRYGG	1 cut(s)	285
BstEII	GGTNACC	1 cut(s)	473
BstKTI	GATC	6 cut(s)	27, 165, 271, 280, 604, 663
BstMAI	GTCTC	2 cut(s)	101, 623
BstMBI	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
BstMCI	CGRYCG	1 cut(s)	280
BstMWI	GCNNNNNNNGC	3 cut(s)	383, 641, 650
BstPI	GGTNACC	1 cut(s)	473
BstSCI	CCNGG	2 cut(s)	147, 165
BstV1I	GCAGC	3 cut(s)	21, 289, 447
BstX2I	RGATCY	2 cut(s)	162, 660
BstYI	RGATCY	2 cut(s)	162, 660
Bsu15I	ATCGAT	1 cut(s)	225
BsuRI	GGCC	4 cut(s)	58, 284, 557, 680
BsuTUI	ATCGAT	1 cut(s)	225
BtgI	CCRYGG	1 cut(s)	285
BtrI	CACGTC	1 cut(s)	16
Cac8I	GCNNGC	3 cut(s)	7, 642, 678
Cfr10I	RCCGGY	1 cut(s)	190
Cfr13I	GGNCC	2 cut(s)	248, 282
ClaI	ATCGAT	1 cut(s)	225
CspAI	ACCGGT	1 cut(s)	190
CviAII	CATG	4 cut(s)	33, 179, 286, 622
DdeI	CTNAG	4 cut(s)	120, 335, 585, 669
DpnI	GATC	6 cut(s)	26, 164, 270, 279, 603, 662
DpnII	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
DrdI	GACNNNNNNGTC	1 cut(s)	115
DseDI	GACNNNNNNGTC	1 cut(s)	115
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
Ecl136II	GAGCTC	1 cut(s)	240
Eco130I	CCWWGG	1 cut(s)	285
Eco147I	AGGCCT	1 cut(s)	680
Eco24I	GRGCYC	1 cut(s)	242
Eco47I	GGWCC	1 cut(s)	248
Eco53kI	GAGCTC	1 cut(s)	240
Eco88I	CYCGRG	2 cut(s)	491, 626
Eco91I	GGTNACC	1 cut(s)	473
EcoICRI	GAGCTC	1 cut(s)	240
EcoO65I	GGTNACC	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	647
EcoT14I	CCWWGG	1 cut(s)	285
EcoT38I	GRGCYC	1 cut(s)	242
ErhI	CCWWGG	1 cut(s)	285
Esp3I	CGTCTC	1 cut(s)	101
FaeI	CATG	4 cut(s)	36, 182, 289, 625
FaiI	YATR	6 cut(s)	34, 180, 222, 287, 540, 623
FalI	AAGNNNNNCTT	2 cut(s)	647, 679
FaqI	GGGAC	2 cut(s)	27, 71
FatI	CATG	4 cut(s)	32, 178, 285, 621
FauI	CCCGC	1 cut(s)	613
Fnu4HI	GCNGC	4 cut(s)	10, 303, 436, 674
FriOI	GRGCYC	1 cut(s)	242
Fsp4HI	GCNGC	4 cut(s)	10, 303, 436, 674
FspBI	CTAG	1 cut(s)	392
GluI	GCNGC	4 cut(s)	10, 303, 436, 674
GsuI	CTGGAG	1 cut(s)	434
HaeIII	GGCC	4 cut(s)	58, 284, 557, 680
HapII	CCGG	4 cut(s)	149, 167, 191, 354
Hin1II	CATG	4 cut(s)	36, 182, 289, 625
HindIII	AAGCTT	1 cut(s)	638
HinfI	GANTC	3 cut(s)	40, 200, 516
HpaII	CCGG	4 cut(s)	149, 167, 191, 354
HphI	GGTGA	3 cut(s)	205, 473, 511
Hpy166II	GTNNAC	1 cut(s)	154
Hpy188I	TCNGA	1 cut(s)	268
Hpy188III	TCNNGA	3 cut(s)	246, 413, 548
Hpy8I	GTNNAC	1 cut(s)	154
Hpy99I	CGWCG	2 cut(s)	17, 317
HpyAV	CCTTC	4 cut(s)	273, 392, 412, 576
HpyCH4III	ACNGT	3 cut(s)	252, 450, 461
HpyCH4IV	ACGT	2 cut(s)	15, 110
HpyCH4V	TGCA	3 cut(s)	32, 435, 635
HpyF10VI	GCNNNNNNNGC	3 cut(s)	383, 641, 650
HpyF3I	CTNAG	4 cut(s)	120, 335, 585, 669
HpySE526I	ACGT	2 cut(s)	15, 110
Hsp92II	CATG	4 cut(s)	36, 182, 289, 625
Kzo9I	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
LmnI	GCTCC	1 cut(s)	237
LpnPI	CCDG	9 cut(s)	162, 180, 204, 231, 283, 367, 398, 630, 662
Lsp1109I	GCAGC	3 cut(s)	21, 289, 447
MaeI	CTAG	1 cut(s)	392
MaeII	ACGT	2 cut(s)	15, 110
MaeIII	GTNAC	3 cut(s)	461, 473, 517
MalI	GATC	6 cut(s)	26, 164, 270, 279, 603, 662
MboI	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
MboII	GAAGA	7 cut(s)	172, 374, 377, 382, 407, 445, 670
MflI	RGATCY	2 cut(s)	162, 660
MhlI	GDGCHC	1 cut(s)	242
MluCI	AATT	3 cut(s)	543, 589, 647
MlyI	GAGTC	3 cut(s)	49, 209, 525
MmeI	TCCRAC	1 cut(s)	228
MnlI	CCTC	8 cut(s)	48, 54, 86, 110, 332, 350, 488, 547
MroXI	GAANNNNTTC	1 cut(s)	422
MseI	TTAA	1 cut(s)	138
MspA1I	CMGCKG	1 cut(s)	608
MspI	CCGG	4 cut(s)	149, 167, 191, 354
MspR9I	CCNGG	2 cut(s)	149, 167
Mva1269I	GAATGC	1 cut(s)	409
MwoI	GCNNNNNNNGC	3 cut(s)	383, 641, 650
NciI	CCSGG	2 cut(s)	149, 167
NcoI	CCATGG	1 cut(s)	285
NdeII	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
NlaIII	CATG	4 cut(s)	36, 182, 289, 625
NmeAIII	GCCGAG	1 cut(s)	84
NmuCI	GTSAC	2 cut(s)	461, 517
PceI	AGGCCT	1 cut(s)	680
PcsI	WCGNNNNNNNCGW	1 cut(s)	477
PctI	GAATGC	1 cut(s)	409
PdmI	GAANNNNTTC	1 cut(s)	422
PinAI	ACCGGT	1 cut(s)	190
PkrI	GCNGC	4 cut(s)	11, 304, 437, 675
Ple19I	CGATCG	1 cut(s)	280
PleI	GAGTC	3 cut(s)	48, 208, 524
PpsI	GAGTC	3 cut(s)	48, 208, 524
Psp124BI	GAGCTC	1 cut(s)	242
PspEI	GGTNACC	1 cut(s)	473
PspPI	GGNCC	2 cut(s)	248, 282
PsuI	RGATCY	2 cut(s)	162, 660
PvuI	CGATCG	1 cut(s)	280
SacI	GAGCTC	1 cut(s)	242
SaqAI	TTAA	1 cut(s)	138
SatI	GCNGC	4 cut(s)	10, 303, 436, 674
Sau3AI	GATC	6 cut(s)	24, 162, 268, 277, 601, 660
Sau96I	GGNCC	2 cut(s)	248, 282
SchI	GAGTC	3 cut(s)	49, 209, 525
ScrFI	CCNGG	2 cut(s)	149, 167
SduI	GDGCHC	1 cut(s)	242
SinI	GGWCC	1 cut(s)	248
SmlI	CTYRAG	1 cut(s)	77
SmoI	CTYRAG	1 cut(s)	77
Sse9I	AATT	3 cut(s)	543, 589, 647
SseBI	AGGCCT	1 cut(s)	680
SsiI	CCGC	2 cut(s)	606, 674
SspMI	CTAG	1 cut(s)	392
SstI	GAGCTC	1 cut(s)	242
StuI	AGGCCT	1 cut(s)	680
StyD4I	CCNGG	2 cut(s)	147, 165
StyI	CCWWGG	1 cut(s)	285
TaaI	ACNGT	3 cut(s)	252, 450, 461
TaiI	ACGT	2 cut(s)	18, 113
TaqI	TCGA	3 cut(s)	225, 312, 480
TasI	AATT	3 cut(s)	543, 589, 647
TauI	GCSGC	1 cut(s)	676
Tru1I	TTAA	1 cut(s)	138
Tru9I	TTAA	1 cut(s)	138
TseFI	GTSAC	2 cut(s)	461, 517
TseI	GCWGC	3 cut(s)	9, 302, 435
Tsp45I	GTSAC	2 cut(s)	461, 517
TspDTI	ATGAA	2 cut(s)	167, 415
VpaK11BI	GGWCC	1 cut(s)	248
XapI	RAATTY	3 cut(s)	543, 589, 647
XcmI	CCANNNNNNNNNTGG	1 cut(s)	110
XmnI	GAANNNNTTC	1 cut(s)	422
XspI	CTAG	1 cut(s)	392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.