Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004653

Physical Location & Seq

Genomic Coordinates Forward (+)

27333337 .. 27334434

Gene Structure 1098 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G264900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGGCCATCACCAAGAGCGACGTGAAGGTCCTGGGAATGTGGCCGAGCCCATTTGTGATGAGGGCTCGCATCTCTCTTAACCTCAAATCTGTCGACTACGAGTTTCTTCAAGAGACATTTGGATCGAAAAGCCAGCTTCTCCTCCAATCCAATCCAGTCCATAAGAAAGTCCCGGTTCTCATTCACGGTGACAAACCCATATGTGAATCTCTTGTCATTGTTGAGTACATTGATGAGGTTTGGGCCTCCGGCCCATCTATCCTCCCTTCCGACCCTTATGATCGCGCCACGGCACGATTTTGGGCTGCCTATGTCAGTGAGAAGTGGTACCCATCATTGAAAGGCATAGGTGCAGCTCAAGAAGAGGAGGCAAAGAAGGCAGCAGTGGAGCAAGTGGAAGAAGGGCTGGCCTTGCTGGAGGAAGCATATGAAAAGTCCAGCAAAGGAAAGGACTTTTTTGGTGGAGATGAGATTGGGTACCTTGACATTGCGTTTGGGTGCTTCTTGGGGTGGCTCAGAGTCATAGAGAAACTGAATGGGGTCAAGCTGCTGGACCAAACAAAGACACCAGGGCTGGTCAATTGGGCTGACAAATTTTGTGCACATAGTGCTGTGAAAGATGTCATGCCTGAGACTGATAAGCTTGCTGAGATTGCTAAGATTCTTGCGGCCAAATTGAGAGGGGCAGCTGCCCCTCCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009404 GO:0009407 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009636 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009719 GO:0009725 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010243 GO:0016740 GO:0016765 GO:0019748 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051186 GO:0060416 GO:0065007 GO:0071704 GO:0080134 GO:0080148 GO:0080167 GO:0090696 GO:0098754 GO:0099402 GO:1901564 GO:1901652 GO:1901698 GO:1901700 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

235

Amino Acids

25.83

Weight (kDa)

5.75

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10360 AT1G10370
fragaria_vesca	FvH4_4g35560 FvH4_4g35600
malus_domestica	MD13G1081900.v1.1 MD13G1082000.v1.1 MD13G1082100.v1.1 MD13G1082200.v1.1 MD16G1081100.v1.1
prunus_persica	Prupe.1G264700_v2.0.a1 Prupe.1G264900_v2.0.a1
pyrus_communis	pycom13g07080 pycom16g07010
rosa_chinensis	RchiOBHm_Chr4g0445201 RchiOBHm_Chr5g0060741
rosa_laevigata	RLG00000005757 RLG00000035391
rosa_multiflora	Rmu_co8192854.1_g000001 Rmu_sc0000050.1_g000034 Rmu_sc0006568.1_g000003 Rmu_sc0029476.1_g000002
rosa_roxburghii	Rroxscaffold_5G00385720
rosa_rugosa	Rorug04G0360000 Rorug05G0333500
rosa_samantha	Rh4AG420800 Rh4BG432700 Rh4CG447400 Rh4DG428800 Rh5BG408500 Rh5DG423700
rosa_wichuraiana	Rw4G036090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	26
Acc65I	GGTACC	2 cut(s)	327, 477
AccB1I	GGYRCC	2 cut(s)	327, 477
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	1 cut(s)	285
AciI	CCGC	1 cut(s)	668
AclWI	GGATC	1 cut(s)	130
AcoI	YGGCCR	3 cut(s)	3, 41, 669
AcsI	RAATTY	1 cut(s)	593
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	3 cut(s)	227, 329, 479
AgsI	TTSAA	2 cut(s)	110, 340
AjiI	CACGTC	1 cut(s)	22
AjnI	CCWGG	2 cut(s)	30, 568
AluBI	AGCT	5 cut(s)	136, 356, 547, 643, 689
AluI	AGCT	5 cut(s)	136, 356, 547, 643, 689
Alw21I	GWGCWC	1 cut(s)	604
Alw26I	GTCTC	2 cut(s)	107, 626
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	1 cut(s)	130
AoxI	GGCC	6 cut(s)	3, 41, 243, 250, 408, 669
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	6 cut(s)	305, 353, 380, 547, 686, 689
ApoI	RAATTY	1 cut(s)	593
ArsI	GACNNNNNNTTYG	2 cut(s)	476, 508
Asp718I	GGTACC	2 cut(s)	327, 477
AspLEI	GCGC	1 cut(s)	287
AspS9I	GGNCC	4 cut(s)	28, 243, 251, 553
AsuC2I	CCSGG	1 cut(s)	173
AsuHPI	GGTGA	1 cut(s)	200
AvaII	GGWCC	2 cut(s)	28, 553
BaeGI	GKGCMC	1 cut(s)	604
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	327, 477
BanII	GRGCYC	2 cut(s)	50, 67
Bbv12I	GWGCWC	1 cut(s)	604
BbvI	GCAGC	6 cut(s)	292, 365, 392, 534, 676, 698
BccI	CCATC	3 cut(s)	14, 262, 340
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	2 cut(s)	32, 570
BcnI	CCSGG	1 cut(s)	173
BcoDI	GTCTC	2 cut(s)	107, 626
BisI	GCNGC	7 cut(s)	306, 354, 381, 548, 669, 687, 690
BlsI	GCNGC	7 cut(s)	307, 355, 382, 549, 670, 688, 691
Bme1390I	CCNGG	3 cut(s)	32, 173, 570
Bme18I	GGWCC	2 cut(s)	28, 553
BmgBI	CACGTC	1 cut(s)	22
BmgT120I	GGNCC	4 cut(s)	28, 243, 251, 553
BmiI	GGNNCC	2 cut(s)	329, 479
BmrFI	CCNGG	3 cut(s)	32, 173, 570
BmsI	GCATC	1 cut(s)	78
BpmI	CTGGAG	1 cut(s)	437
BpuEI	CTTGAG	1 cut(s)	342
BpuMI	CCSGG	1 cut(s)	173
BsaJI	CCNNGG	3 cut(s)	31, 288, 569
Bse1I	ACTGG	1 cut(s)	155
Bse3DI	GCAATG	1 cut(s)	486
BseBI	CCWGG	2 cut(s)	32, 570
BseDI	CCNNGG	3 cut(s)	31, 288, 569
BseMI	GCAATG	1 cut(s)	486
BseMII	CTCAG	3 cut(s)	529, 621, 639
BseNI	ACTGG	1 cut(s)	155
BseRI	GAGGAG	2 cut(s)	131, 380
BseSI	GKGCMC	1 cut(s)	604
BseXI	GCAGC	6 cut(s)	292, 365, 392, 534, 676, 698
BsgI	GTGCAG	1 cut(s)	372
Bsh1236I	CGCG	1 cut(s)	285
BshFI	GGCC	6 cut(s)	5, 43, 245, 252, 410, 671
BshNI	GGYRCC	2 cut(s)	327, 477
BsiHKAI	GWGCWC	1 cut(s)	604
BsiSI	CCGG	2 cut(s)	173, 249
BslFI	GGGAC	1 cut(s)	155
BsmAI	GTCTC	2 cut(s)	107, 626
BsmFI	GGGAC	1 cut(s)	155
BsnI	GGCC	6 cut(s)	5, 43, 245, 252, 410, 671
Bsp1286I	GDGCHC	3 cut(s)	50, 67, 604
Bsp143I	GATC	2 cut(s)	122, 280
BspACI	CCGC	1 cut(s)	668
BspANI	GGCC	6 cut(s)	5, 43, 245, 252, 410, 671
BspCNI	CTCAG	3 cut(s)	528, 622, 640
BspFNI	CGCG	1 cut(s)	285
BspLI	GGNNCC	2 cut(s)	329, 479
BspPI	GGATC	1 cut(s)	130
BspT107I	GGYRCC	2 cut(s)	327, 477
BsrDI	GCAATG	1 cut(s)	486
BsrI	ACTGG	1 cut(s)	155
BssECI	CCNNGG	3 cut(s)	31, 288, 569
BssMI	GATC	2 cut(s)	122, 280
Bst2UI	CCWGG	2 cut(s)	32, 570
Bst4CI	ACNGT	1 cut(s)	188
Bst6I	CTCTTC	1 cut(s)	357
BstAPI	GCANNNNNTGC	1 cut(s)	608
BstC8I	GCNNGC	4 cut(s)	67, 134, 408, 645
BstDEI	CTNAG	4 cut(s)	515, 630, 648, 657
BstDSI	CCRYGG	1 cut(s)	288
BstFNI	CGCG	1 cut(s)	285
BstHHI	GCGC	1 cut(s)	287
BstKTI	GATC	2 cut(s)	125, 283
BstMAI	GTCTC	2 cut(s)	107, 626
BstMBI	GATC	2 cut(s)	122, 280
BstMWI	GCNNNNNNNGC	4 cut(s)	377, 412, 608, 653
BstNI	CCWGG	2 cut(s)	32, 570
BstSCI	CCNGG	3 cut(s)	30, 171, 568
BstSLI	GKGCMC	1 cut(s)	604
BstUI	CGCG	1 cut(s)	285
BstV1I	GCAGC	6 cut(s)	292, 365, 392, 534, 676, 698
BsuRI	GGCC	6 cut(s)	5, 43, 245, 252, 410, 671
BtgI	CCRYGG	1 cut(s)	288
BtrI	CACGTC	1 cut(s)	22
BtsI	GCAGTG	1 cut(s)	390
BtsIMutI	CAGTG	2 cut(s)	322, 390
Cac8I	GCNNGC	4 cut(s)	67, 134, 408, 645
CfoI	GCGC	1 cut(s)	287
Cfr13I	GGNCC	4 cut(s)	28, 243, 251, 553
Csp6I	GTAC	3 cut(s)	226, 328, 478
CviAII	CATG	1 cut(s)	625
CviQI	GTAC	3 cut(s)	226, 328, 478
DdeI	CTNAG	4 cut(s)	515, 630, 648, 657
DpnI	GATC	2 cut(s)	124, 282
DpnII	GATC	2 cut(s)	122, 280
DraIII	CACNNNGTG	1 cut(s)	608
DrdI	GACNNNNNNGTC	1 cut(s)	26
DseDI	GACNNNNNNGTC	1 cut(s)	26
EaeI	YGGCCR	3 cut(s)	3, 41, 669
Eam1104I	CTCTTC	1 cut(s)	357
EarI	CTCTTC	1 cut(s)	357
Eco24I	GRGCYC	2 cut(s)	50, 67
Eco47I	GGWCC	2 cut(s)	28, 553
EcoO109I	RGGNCCY	1 cut(s)	28
EcoRII	CCWGG	2 cut(s)	30, 568
EcoT38I	GRGCYC	2 cut(s)	50, 67
FaeI	CATG	1 cut(s)	628
FaqI	GGGAC	1 cut(s)	155
FatI	CATG	1 cut(s)	624
FauNDI	CATATG	2 cut(s)	200, 427
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	7 cut(s)	306, 354, 381, 548, 669, 687, 690
FriOI	GRGCYC	2 cut(s)	50, 67
Fsp4HI	GCNGC	7 cut(s)	306, 354, 381, 548, 669, 687, 690
GlaI	GCGC	1 cut(s)	286
GluI	GCNGC	7 cut(s)	306, 354, 381, 548, 669, 687, 690
GsuI	CTGGAG	1 cut(s)	437
HaeIII	GGCC	6 cut(s)	5, 43, 245, 252, 410, 671
HapII	CCGG	2 cut(s)	173, 249
HhaI	GCGC	1 cut(s)	287
Hin1II	CATG	1 cut(s)	628
Hin6I	GCGC	1 cut(s)	285
HinP1I	GCGC	1 cut(s)	285
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HindIII	AAGCTT	1 cut(s)	641
HinfI	GANTC	3 cut(s)	206, 519, 661
HpaII	CCGG	2 cut(s)	173, 249
HphI	GGTGA	1 cut(s)	200
Hpy166II	GTNNAC	2 cut(s)	94, 602
Hpy188I	TCNGA	2 cut(s)	271, 518
Hpy188III	TCNNGA	2 cut(s)	110, 359
Hpy8I	GTNNAC	2 cut(s)	94, 602
Hpy99I	CGWCG	1 cut(s)	23
HpyAV	CCTTC	4 cut(s)	19, 276, 370, 395
HpyCH4III	ACNGT	1 cut(s)	188
HpyCH4IV	ACGT	1 cut(s)	21
HpyCH4V	TGCA	2 cut(s)	353, 602
HpyF10VI	GCNNNNNNNGC	4 cut(s)	377, 412, 608, 653
HpyF3I	CTNAG	4 cut(s)	515, 630, 648, 657
HpySE526I	ACGT	1 cut(s)	21
Hsp92II	CATG	1 cut(s)	628
HspAI	GCGC	1 cut(s)	285
KpnI	GGTACC	2 cut(s)	331, 481
Kzo9I	GATC	2 cut(s)	122, 280
LmnI	GCTCC	1 cut(s)	388
Lsp1109I	GCAGC	6 cut(s)	292, 365, 392, 534, 676, 698
LweI	GCATC	1 cut(s)	78
MaeII	ACGT	1 cut(s)	21
MaeIII	GTNAC	1 cut(s)	188
MalI	GATC	2 cut(s)	124, 282
MboI	GATC	2 cut(s)	122, 280
MboII	GAAGA	3 cut(s)	98, 374, 410
MfeI	CAATTG	1 cut(s)	580
MhlI	GDGCHC	3 cut(s)	50, 67, 604
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	580, 593, 674
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	528
MmeI	TCCRAC	1 cut(s)	294
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	78
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	689
MspI	CCGG	2 cut(s)	173, 249
MspR9I	CCNGG	3 cut(s)	32, 173, 570
MunI	CAATTG	1 cut(s)	580
MvaI	CCWGG	2 cut(s)	32, 570
MvnI	CGCG	1 cut(s)	285
MwoI	GCNNNNNNNGC	4 cut(s)	377, 412, 608, 653
NciI	CCSGG	1 cut(s)	173
NdeI	CATATG	2 cut(s)	200, 427
NdeII	GATC	2 cut(s)	122, 280
NlaIII	CATG	1 cut(s)	628
NlaIV	GGNNCC	2 cut(s)	329, 479
NmeAIII	GCCGAG	1 cut(s)	69
NmuCI	GTSAC	1 cut(s)	188
PfeI	GAWTC	2 cut(s)	206, 661
PkrI	GCNGC	7 cut(s)	307, 355, 382, 549, 670, 688, 691
PleI	GAGTC	1 cut(s)	527
PpsI	GAGTC	1 cut(s)	527
PpuMI	RGGWCCY	1 cut(s)	28
Psp5II	RGGWCCY	1 cut(s)	28
Psp6I	CCWGG	2 cut(s)	30, 568
PspGI	CCWGG	2 cut(s)	30, 568
PspN4I	GGNNCC	2 cut(s)	329, 479
PspPI	GGNCC	4 cut(s)	28, 243, 251, 553
PspPPI	RGGWCCY	1 cut(s)	28
PvuII	CAGCTG	1 cut(s)	689
RsaI	GTAC	3 cut(s)	227, 329, 479
RsaNI	GTAC	3 cut(s)	226, 328, 478
SalI	GTCGAC	1 cut(s)	92
SaqAI	TTAA	1 cut(s)	78
SatI	GCNGC	7 cut(s)	306, 354, 381, 548, 669, 687, 690
Sau3AI	GATC	2 cut(s)	122, 280
Sau96I	GGNCC	4 cut(s)	28, 243, 251, 553
SchI	GAGTC	1 cut(s)	528
ScrFI	CCNGG	3 cut(s)	32, 173, 570
SduI	GDGCHC	3 cut(s)	50, 67, 604
SfaNI	GCATC	1 cut(s)	78
SinI	GGWCC	2 cut(s)	28, 553
SmlI	CTYRAG	1 cut(s)	357
SmoI	CTYRAG	1 cut(s)	357
Sse9I	AATT	3 cut(s)	580, 593, 674
SsiI	CCGC	1 cut(s)	668
StyD4I	CCNGG	3 cut(s)	30, 171, 568
TaaI	ACNGT	1 cut(s)	188
TaiI	ACGT	1 cut(s)	24
TaqI	TCGA	2 cut(s)	93, 125
TasI	AATT	3 cut(s)	580, 593, 674
TatI	WGTACW	1 cut(s)	225
TauI	GCSGC	1 cut(s)	671
TfiI	GAWTC	2 cut(s)	206, 661
Tru1I	TTAA	1 cut(s)	78
Tru9I	TTAA	1 cut(s)	78
TscAI	CASTG	2 cut(s)	322, 390
TseFI	GTSAC	1 cut(s)	188
TseI	GCWGC	6 cut(s)	305, 353, 380, 547, 686, 689
Tsp45I	GTSAC	1 cut(s)	188
TspDTI	ATGAA	1 cut(s)	444
TspRI	CASTG	2 cut(s)	322, 390
VneI	GTGCAC	1 cut(s)	600
VpaK11BI	GGWCC	2 cut(s)	28, 553
XapI	RAATTY	1 cut(s)	593
XmiI	GTMKAC	1 cut(s)	93

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.