Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004653

Physical Location & Seq

Genomic Coordinates Forward (+)

27324598 .. 27326287

Gene Structure 1690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G264700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

ATGGCCAAGAATGATTTGAAGGTTTTGGGAGCATGGCCGAGCCCATATGTGATGAGAGCTCGGATCTCTCTGAATATCAAGTCTCTGGACTATGAGTTTCTTGAGGAGACATTTGGATCGAAAAGCCAGCTTCTGCTCCAATCAAACCCTGTCCACAAGAAAATCCCAGTTCTCATTCATGGCGACAAACCCATCTGTGAATCTCTCGTCATTGTTGAGTACATCGACGAGGTTTGGCCATCGAGTCCCTCCATCCTCCCTTCTCACCCATATGATCGTGCTACTGCCAGATTTTGGGCTTCCTATATCGATGAGAAGTGGTTCCCGGCCATGAAAGGCATTGCTGCTGCTCAATCAGAGGAGGCGAGGAAGGCGGCAATCGAGCAAGTGGCTGAAGGGCTGGCGCTATTGGAGGATGCCTTTCAGAAGACTAGCAAAGGGAAGGACTTCTTCAGTGGAGACAAAATTGGGTACCTTGACATTGCATTTGGGTGCTTCTTGGGGTGGCTCAGAGTGACAGAGAAGATGAATGGGATCAAATTGCTGGACGAAACAAAGACACCAGGGCTGGCCAAATGGGCTCACAAGTTTTGTGCAGATGCTGCTGTGAAGGATGTTATGCCTGAGACTGAGAAGCTTGCCGAGGTTGCTAAGATTATTACGGCCAAATTGAGAGGTGCAGGTGCTCCCCCGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009404 GO:0009407 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009636 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009719 GO:0009725 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010243 GO:0016740 GO:0016765 GO:0019748 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051186 GO:0060416 GO:0065007 GO:0071704 GO:0080134 GO:0080148 GO:0080167 GO:0090696 GO:0098754 GO:0099402 GO:1901564 GO:1901652 GO:1901698 GO:1901700 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

233

Amino Acids

25.74

Weight (kDa)

7.67

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10360 AT1G10370
fragaria_vesca	FvH4_4g35560 FvH4_4g35600
malus_domestica	MD13G1081900.v1.1 MD13G1082000.v1.1 MD13G1082100.v1.1 MD13G1082200.v1.1 MD16G1081100.v1.1
prunus_persica	Prupe.1G264700_v2.0.a1 Prupe.1G264900_v2.0.a1
pyrus_communis	pycom13g07080 pycom16g07010
rosa_chinensis	RchiOBHm_Chr4g0445201 RchiOBHm_Chr5g0060741
rosa_laevigata	RLG00000005757 RLG00000035391
rosa_multiflora	Rmu_co8192854.1_g000001 Rmu_sc0000050.1_g000034 Rmu_sc0006568.1_g000003 Rmu_sc0029476.1_g000002
rosa_roxburghii	Rroxscaffold_5G00385720
rosa_rugosa	Rorug04G0360000 Rorug05G0333500
rosa_samantha	Rh4AG420800 Rh4BG432700 Rh4CG447400 Rh4DG428800 Rh5BG408500 Rh5DG423700
rosa_wichuraiana	Rw4G036090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	671
Acc65I	GGTACC	1 cut(s)	471
AccB1I	GGYRCC	1 cut(s)	471
AccB7I	CCANNNNNTGG	1 cut(s)	294
AciI	CCGC	1 cut(s)	374
AclWI	GGATC	3 cut(s)	71, 124, 542
AcoI	YGGCCR	6 cut(s)	3, 35, 236, 327, 570, 663
AcuI	CTGAAG	2 cut(s)	414, 436
AfaI	GTAC	2 cut(s)	221, 473
AfiI	CCNNNNNNNGG	1 cut(s)	294
AgsI	TTSAA	1 cut(s)	19
AjnI	CCWGG	1 cut(s)	562
AluBI	AGCT	3 cut(s)	59, 130, 637
AluI	AGCT	3 cut(s)	59, 130, 637
Alw21I	GWGCWC	2 cut(s)	61, 688
Alw26I	GTCTC	4 cut(s)	87, 101, 453, 620
AlwI	GGATC	3 cut(s)	71, 124, 542
AlwNI	CAGNNNCTG	2 cut(s)	133, 602
AoxI	GGCC	6 cut(s)	3, 35, 236, 327, 570, 663
ApeKI	GCWGC	3 cut(s)	344, 347, 602
ArsI	GACNNNNNNTTYG	2 cut(s)	470, 502
Asp700I	GAANNNNTTC	2 cut(s)	320, 446
Asp718I	GGTACC	1 cut(s)	471
AspLEI	GCGC	1 cut(s)	406
AsuC2I	CCSGG	1 cut(s)	326
AsuHPI	GGTGA	1 cut(s)	257
BalI	TGGCCA	3 cut(s)	5, 238, 572
BanI	GGYRCC	1 cut(s)	471
BanII	GRGCYC	3 cut(s)	44, 61, 583
BbsI	GAAGAC	1 cut(s)	434
Bbv12I	GWGCWC	2 cut(s)	61, 688
BbvI	GCAGC	3 cut(s)	331, 334, 589
BccI	CCATC	3 cut(s)	200, 247, 260
BceAI	ACGGC	1 cut(s)	678
BciT130I	CCWGG	1 cut(s)	564
BcnI	CCSGG	1 cut(s)	326
BcoDI	GTCTC	4 cut(s)	87, 101, 453, 620
BfaI	CTAG	1 cut(s)	432
BfoI	RGCGCY	1 cut(s)	407
BfuAI	ACCTGC	1 cut(s)	671
BglI	GCCNNNNNGGC	1 cut(s)	578
BisI	GCNGC	4 cut(s)	345, 348, 375, 603
BlsI	GCNGC	4 cut(s)	346, 349, 376, 604
Bme1390I	CCNGG	2 cut(s)	326, 564
BmiI	GGNNCC	2 cut(s)	323, 473
BmrFI	CCNGG	2 cut(s)	326, 564
BmrI	ACTGGG	1 cut(s)	161
BmsI	GCATC	2 cut(s)	406, 589
BmuI	ACTGGG	1 cut(s)	161
BpiI	GAAGAC	1 cut(s)	434
BpuEI	CTTGAG	1 cut(s)	122
BpuMI	CCSGG	1 cut(s)	326
Bsa29I	ATCGAT	1 cut(s)	309
BsaJI	CCNNGG	2 cut(s)	563, 642
Bsc4I	CCNNNNNNNGG	1 cut(s)	294
Bse1I	ACTGG	1 cut(s)	167
Bse3DI	GCAATG	2 cut(s)	339, 480
BseBI	CCWGG	1 cut(s)	564
BseCI	ATCGAT	1 cut(s)	309
BseDI	CCNNGG	2 cut(s)	563, 642
BseGI	GGATG	3 cut(s)	252, 421, 619
BseLI	CCNNNNNNNGG	1 cut(s)	294
BseMI	GCAATG	2 cut(s)	339, 480
BseMII	CTCAG	3 cut(s)	523, 615, 621
BseNI	ACTGG	1 cut(s)	167
BseRI	GAGGAG	2 cut(s)	119, 374
BseXI	GCAGC	3 cut(s)	331, 334, 589
BsgI	GTGCAG	2 cut(s)	615, 699
BshFI	GGCC	6 cut(s)	5, 37, 238, 329, 572, 665
BshNI	GGYRCC	1 cut(s)	471
BshVI	ATCGAT	1 cut(s)	309
BsiHKAI	GWGCWC	2 cut(s)	61, 688
BsiSI	CCGG	1 cut(s)	326
BslFI	GGGAC	1 cut(s)	231
BslI	CCNNNNNNNGG	1 cut(s)	294
BsmAI	GTCTC	4 cut(s)	87, 101, 453, 620
BsmFI	GGGAC	1 cut(s)	231
BsnI	GGCC	6 cut(s)	5, 37, 238, 329, 572, 665
Bsp1286I	GDGCHC	4 cut(s)	44, 61, 583, 688
Bsp143I	GATC	4 cut(s)	63, 116, 274, 534
BspACI	CCGC	1 cut(s)	374
BspANI	GGCC	6 cut(s)	5, 37, 238, 329, 572, 665
BspCNI	CTCAG	3 cut(s)	522, 616, 622
BspDI	ATCGAT	1 cut(s)	309
BspLI	GGNNCC	2 cut(s)	323, 473
BspMI	ACCTGC	1 cut(s)	671
BspPI	GGATC	3 cut(s)	71, 124, 542
BspT107I	GGYRCC	1 cut(s)	471
BsrDI	GCAATG	2 cut(s)	339, 480
BsrI	ACTGG	1 cut(s)	167
BssECI	CCNNGG	2 cut(s)	563, 642
BssMI	GATC	4 cut(s)	63, 116, 274, 534
Bst2UI	CCWGG	1 cut(s)	564
BstAPI	GCANNNNNTGC	1 cut(s)	602
BstC8I	GCNNGC	4 cut(s)	128, 402, 570, 639
BstDEI	CTNAG	4 cut(s)	509, 624, 630, 651
BstF5I	GGATG	3 cut(s)	252, 421, 619
BstH2I	RGCGCY	1 cut(s)	407
BstHHI	GCGC	1 cut(s)	406
BstKTI	GATC	4 cut(s)	66, 119, 277, 537
BstMAI	GTCTC	4 cut(s)	87, 101, 453, 620
BstMBI	GATC	4 cut(s)	63, 116, 274, 534
BstMWI	GCNNNNNNNGC	4 cut(s)	371, 578, 602, 647
BstNI	CCWGG	1 cut(s)	564
BstSCI	CCNGG	2 cut(s)	324, 562
BstV1I	GCAGC	3 cut(s)	331, 334, 589
BstV2I	GAAGAC	1 cut(s)	434
BstX2I	RGATCY	1 cut(s)	63
BstYI	RGATCY	1 cut(s)	63
Bsu15I	ATCGAT	1 cut(s)	309
BsuRI	GGCC	6 cut(s)	5, 37, 238, 329, 572, 665
BsuTUI	ATCGAT	1 cut(s)	309
BtsCI	GGATG	3 cut(s)	252, 421, 619
BtsIMutI	CAGTG	1 cut(s)	460
BveI	ACCTGC	1 cut(s)	671
Cac8I	GCNNGC	4 cut(s)	128, 402, 570, 639
CaiI	CAGNNNCTG	2 cut(s)	133, 602
CfoI	GCGC	1 cut(s)	406
ClaI	ATCGAT	1 cut(s)	309
Csp6I	GTAC	2 cut(s)	220, 472
CviAII	CATG	3 cut(s)	33, 179, 331
CviQI	GTAC	2 cut(s)	220, 472
DdeI	CTNAG	4 cut(s)	509, 624, 630, 651
DpnI	GATC	4 cut(s)	65, 118, 276, 536
DpnII	GATC	4 cut(s)	63, 116, 274, 534
EaeI	YGGCCR	6 cut(s)	3, 35, 236, 327, 570, 663
Ecl136II	GAGCTC	1 cut(s)	59
Eco24I	GRGCYC	3 cut(s)	44, 61, 583
Eco53kI	GAGCTC	1 cut(s)	59
Eco57I	CTGAAG	2 cut(s)	414, 436
EcoICRI	GAGCTC	1 cut(s)	59
EcoRII	CCWGG	1 cut(s)	562
EcoT38I	GRGCYC	3 cut(s)	44, 61, 583
FaeI	CATG	3 cut(s)	36, 182, 334
FalI	AAGNNNNNCTT	2 cut(s)	434, 466
FaqI	GGGAC	1 cut(s)	231
FatI	CATG	3 cut(s)	32, 178, 330
FauNDI	CATATG	2 cut(s)	46, 271
Fnu4HI	GCNGC	4 cut(s)	345, 348, 375, 603
FokI	GGATG	3 cut(s)	239, 428, 626
FriOI	GRGCYC	3 cut(s)	44, 61, 583
Fsp4HI	GCNGC	4 cut(s)	345, 348, 375, 603
FspBI	CTAG	1 cut(s)	432
GlaI	GCGC	1 cut(s)	405
GluI	GCNGC	4 cut(s)	345, 348, 375, 603
HaeII	RGCGCY	1 cut(s)	407
HaeIII	GGCC	6 cut(s)	5, 37, 238, 329, 572, 665
HapII	CCGG	1 cut(s)	326
HhaI	GCGC	1 cut(s)	406
Hin1II	CATG	3 cut(s)	36, 182, 334
Hin6I	GCGC	1 cut(s)	404
HinP1I	GCGC	1 cut(s)	404
HindIII	AAGCTT	1 cut(s)	635
HinfI	GANTC	2 cut(s)	200, 244
HpaII	CCGG	1 cut(s)	326
HphI	GGTGA	1 cut(s)	257
Hpy166II	GTNNAC	1 cut(s)	154
Hpy188I	TCNGA	5 cut(s)	63, 72, 358, 426, 512
Hpy188III	TCNNGA	2 cut(s)	86, 101
Hpy8I	GTNNAC	1 cut(s)	154
Hpy99I	CGWCG	1 cut(s)	230
HpyAV	CCTTC	6 cut(s)	13, 270, 364, 389, 436, 604
HpyCH4V	TGCA	3 cut(s)	485, 596, 680
HpyF10VI	GCNNNNNNNGC	4 cut(s)	371, 578, 602, 647
HpyF3I	CTNAG	4 cut(s)	509, 624, 630, 651
Hsp92II	CATG	3 cut(s)	36, 182, 334
HspAI	GCGC	1 cut(s)	404
KpnI	GGTACC	1 cut(s)	475
Kzo9I	GATC	4 cut(s)	63, 116, 274, 534
LmnI	GCTCC	3 cut(s)	29, 141, 691
Lsp1109I	GCAGC	3 cut(s)	331, 334, 589
LweI	GCATC	2 cut(s)	406, 589
MaeI	CTAG	1 cut(s)	432
MaeIII	GTNAC	1 cut(s)	514
MalI	GATC	4 cut(s)	65, 118, 276, 536
MboI	GATC	4 cut(s)	63, 116, 274, 534
MboII	GAAGA	3 cut(s)	439, 442, 535
MflI	RGATCY	1 cut(s)	63
MhlI	GDGCHC	4 cut(s)	44, 61, 583, 688
MlsI	TGGCCA	3 cut(s)	5, 238, 572
MluCI	AATT	3 cut(s)	465, 539, 668
MluNI	TGGCCA	3 cut(s)	5, 238, 572
MlyI	GAGTC	1 cut(s)	253
Mox20I	TGGCCA	3 cut(s)	5, 238, 572
MroXI	GAANNNNTTC	2 cut(s)	320, 446
MscI	TGGCCA	3 cut(s)	5, 238, 572
MslI	CAYNNNNRTG	2 cut(s)	270, 490
Msp20I	TGGCCA	3 cut(s)	5, 238, 572
MspI	CCGG	1 cut(s)	326
MspR9I	CCNGG	2 cut(s)	326, 564
MvaI	CCWGG	1 cut(s)	564
MwoI	GCNNNNNNNGC	4 cut(s)	371, 578, 602, 647
NciI	CCSGG	1 cut(s)	326
NdeI	CATATG	2 cut(s)	46, 271
NdeII	GATC	4 cut(s)	63, 116, 274, 534
NlaIII	CATG	3 cut(s)	36, 182, 334
NlaIV	GGNNCC	2 cut(s)	323, 473
NmeAIII	GCCGAG	2 cut(s)	63, 667
NmuCI	GTSAC	1 cut(s)	514
PaqCI	CACCTGC	1 cut(s)	671
PdmI	GAANNNNTTC	2 cut(s)	320, 446
PfeI	GAWTC	1 cut(s)	200
PflMI	CCANNNNNTGG	1 cut(s)	294
PkrI	GCNGC	4 cut(s)	346, 349, 376, 604
PleI	GAGTC	1 cut(s)	252
PpsI	GAGTC	1 cut(s)	252
Psp124BI	GAGCTC	1 cut(s)	61
Psp6I	CCWGG	1 cut(s)	562
PspGI	CCWGG	1 cut(s)	562
PspN4I	GGNNCC	2 cut(s)	323, 473
PstNI	CAGNNNCTG	2 cut(s)	133, 602
PsuI	RGATCY	1 cut(s)	63
RsaI	GTAC	2 cut(s)	221, 473
RsaNI	GTAC	2 cut(s)	220, 472
RseI	CAYNNNNRTG	2 cut(s)	270, 490
SacI	GAGCTC	1 cut(s)	61
SatI	GCNGC	4 cut(s)	345, 348, 375, 603
Sau3AI	GATC	4 cut(s)	63, 116, 274, 534
SchI	GAGTC	1 cut(s)	253
ScrFI	CCNGG	2 cut(s)	326, 564
SduI	GDGCHC	4 cut(s)	44, 61, 583, 688
SetI	ASST	9 cut(s)	24, 61, 132, 234, 477, 639, 648, 679, 685
SfaNI	GCATC	2 cut(s)	406, 589
SmiMI	CAYNNNNRTG	2 cut(s)	270, 490
SmlI	CTYRAG	1 cut(s)	101
SmoI	CTYRAG	1 cut(s)	101
Sse9I	AATT	3 cut(s)	465, 539, 668
SsiI	CCGC	1 cut(s)	374
SspMI	CTAG	1 cut(s)	432
SstI	GAGCTC	1 cut(s)	61
StyD4I	CCNGG	2 cut(s)	324, 562
TaqI	TCGA	5 cut(s)	119, 225, 242, 309, 381
TasI	AATT	3 cut(s)	465, 539, 668
TatI	WGTACW	1 cut(s)	219
TauI	GCSGC	1 cut(s)	377
TfiI	GAWTC	1 cut(s)	200
TscAI	CASTG	1 cut(s)	460
TseFI	GTSAC	1 cut(s)	514
TseI	GCWGC	3 cut(s)	344, 347, 602
Tsp45I	GTSAC	1 cut(s)	514
TspDTI	ATGAA	3 cut(s)	167, 347, 542
TspRI	CASTG	1 cut(s)	460
Van91I	CCANNNNNTGG	1 cut(s)	294
XmnI	GAANNNNTTC	2 cut(s)	320, 446
XspI	CTAG	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.