Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003039

Physical Location & Seq

Genomic Coordinates Forward (+)

9778851 .. 9782907

Gene Structure 4057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G28060.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGATAAGGAGAGATATTCCAGGAGCCACCGTGACGATCGTGATCGAGATTCGAGTCCCGACCATTCTCCACAACGTGAAGGAGGACGCCGCCGTGACCGCGATGTTGATTCGAAGCGTCGTGATTCAGATCACTACCGTTCATCGAGGCGCGGCGATAGGGAAGATGAGAGAGATAGGACCAAGGATAGAAGAGGGAGATCTGTAGAGCGAGGCGAGAGAGAAGGGAGTAGAGATAGGGAAAAGCATCACCATGAGAGGTCTCACGAAGGTAGTAAAGAGAAGGAATCGAGGAGCAAGAGGAAAGATAGAGAGGAAGAGAATGGGGCTAGGGATGGGAAGAAGAAATCTAGGTTTGCTGATGGGAATGGTGAGAGGAGGAGCAGGTTTGAGGATGTGGCTATTGAAGTTGAGAACAAAGATGCTCAAGTCTCTGAGGGTTCTGGGGCTACGAATCCAACCAGTGGCGTTACGATGGGAGCCTCTACATATAGTTCTATTCCATCGGAAGCTTCTGCTGCCCCTAGTCAAACACTGCTCACTAAGGTATCTTCGATATCTACAACGGATGAAAATAAGGCTAGTGTTGTCAGATCTCATGAGGTTCCTGGAAAATCTAGTACAGATGGAAGACCATTGTCCACAGCTGGGAAAAGTAGTGCAAACTTGCCTCTTGATTCATCAGCGTTAGCAGCGAAAGCTAGGAAAGCACTACAATTGCAAAAGGGATTGGCTGATAGATTGAAGAACCTTCCTTTGCTGAAGAAGGCTACTAAGCCAACTTCAGAAGGTAGCCCACATACCAGAGTGCCACCATCGACTACCACTCCTGCTGTCTCTACAGGCACATCTTTTGCTTCAACATTACCACATACTGGCCTTGCTGGCTTTGGGAGTATTGCCAACATTGAAGCTGTTAAGCGAGCCCAGGAGCTGGCAGCTAATATGGGATTTCATCAGGATCGAGAGTTCGCTCCCGTTATTAACCTATTTCCAGGACAGGCACCCTCAGATATGACTGTTGCACAGAGACCGGAAAAGCCCCCTGTTCTGCGCGTGGATGCACTAGGAAGGGAGATAGATGAACACGGAAATGTGATTAGTGTGACTAAACCAAGCAATCTTAGTACATTGAAGGTTAACATAAACAAAAAGAAGAAAGATGCTTTTCAGATTCTTAAACCTCAACTGGAAGCAGATCTAAAAGAAAACCCCTATTTTGACACAAGGATGGGTATTGATGAAAAAAAGATTCTGAGACCTAAACGTATGAGTTTCCAGTTTGTTGAGGAAGGTAAATGGACAAGAGATGCTGAAAATTTGAAGTTTAAGAGTCATTTTGGTGAAGCAAAAGCGAAGGAGCTGAAGGTGAAGCAAGCACAACTGGCTAAGGCAAACGATGATATAAATCCAAATTTGATAGAGGTATCCGAACGTGTCCCGAGAAAAGAGAAGCCCAAGGAGCCAATTCCAGATGTTGAGTGGTGGGATGCAAATGTCCTCACCAATGGCGAATACGGCGAAATAACTGATGGCACCATTACTGAAAGCCATCTGAAGATAGAAAAACTTACTCATTACATTGAGCATCCTCGTCCCATAGAGCCACCTGCAGAGGCAGCTCCTCCACCACCCCAACCTCTTAAACTGACAAAGAAGGAACAGAAGAAACTGCGAACCCAGAGGCGTCTAGCAAAAGAAAAGGAGAAACAGGAGATGATCAGACAAGGGTTGCTGGAACCACCAAAAGCAAAGGTGAAGATGAGCAACTTAATGAAGGTTCTTGGTTCTGAAGCGACCCAAGACCCAACAAAGCTTGAAAAAGAGATCCGCACAGCAGCTGCTGAGCGTGAACAGGCTCATACAGATAGGAATGCTGCCCGGAAGCTAACTCCTGCAGAGAAACGTGAGAAGAAAGAGAGGAAGCTTTTCGATGATCCAACAACGGTTGAGACGATTGTGTCGGTGTACAAGATCAAAAAGTTATCGCACCCTAAAACAAGATTCAAAGTGGAGATGAATGCAAGAGAGAACAGATTAACAGGGTGTAGTGTGATGACGGATGAAATGAGTGTGGTTGTGGTTGAGGGCAAGAGCAAAGCGATAAAGAGATACGGGAAGCTGATGATGAAGCGAATAAACTGGGAAGAGGCAGAGAGGAAGGAAGGGAATGAAGACGAGGAAGAAGAAGTGAATGGCGGAAACAAGTGTTGGTTGGTTTGGCAAGGAAGTATTGGGAAACCGAGTTTTCATAGGTTTCATGTACACGAATGCGTGACGGAATCCACTGCCAAGAAAGTTTTCATGGATGCTGGTGTTGTTCACTACTGGGATCTCGCTGTCAATTACTCAGACGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022414 GO:0030532 GO:0031323 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF1115 PRP3

Protein Analysis

786

Amino Acids

88.64

Weight (kDa)

9.43

Isoelectric Point (pI)

46.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRP3	PF08572	404 - 631	4.1e-65	pre-mRNA processing factor 3 domain
Prp3_C	PF06544	655 - 780	4e-42	Small nuclear ribonucleoprotein Prp3, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003039)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28060 AT1G28060 AT1G28060 AT3G55930
fragaria_vesca	FvH4_2g04410 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820
malus_domestica	MD01G1117500.v1.1 MD07G1185000.v1.1
prunus_persica	Prupe.2G224900_v2.0.a1 Prupe.2G224900_v2.0.a1 Prupe.6G042200_v2.0.a1
pyrus_communis	pycom01g14520 pycom07g17720
rosa_chinensis	RchiOBHm_Chr1g0365041
rosa_laevigata	RLG00000027448
rosa_multiflora	Rmu_sc0002451.1_g000035
rosa_roxburghii	Rroxscaffold_4G00291520 Rroxscaffold_4G00291970
rosa_rugosa	Rorug01G0319100 Rorug01G0319200
rosa_samantha	Rh1AG188900 Rh1AG328200 Rh1BG289700 Rh1CG174500 Rh1CG306300 Rh1DG163200 Rh1DG321100 Rh4DG027000
rosa_wichuraiana	Rw1G029120 Rw2G017970 Rw3G016000 Rw4G013150 Rw5G015830 Rw5G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1618
AasI	GACNNNNNNGTC	1 cut(s)	1960
Acc36I	ACCTGC	2 cut(s)	375, 1618
AccB1I	GGYRCC	2 cut(s)	1003, 1535
AccB7I	CCANNNNNTGG	3 cut(s)	464, 875, 934
AccII	CGCG	3 cut(s)	102, 153, 1056
AciI	CCGC	5 cut(s)	91, 100, 153, 1831, 2199
AclWI	GGATC	4 cut(s)	969, 1822, 1931, 2340
AcsI	RAATTY	2 cut(s)	1318, 1414
AcuI	CTGAAG	5 cut(s)	768, 782, 1385, 1577, 1812
AcyI	GRCGYC	2 cut(s)	88, 1687
AdeI	CACNNNGTG	1 cut(s)	77
AfaI	GTAC	4 cut(s)	622, 1129, 1970, 2265
AfiI	CCNNNNNNNGG	4 cut(s)	464, 648, 875, 934
AflIII	ACRYGT	1 cut(s)	1435
AgsI	TTSAA	8 cut(s)	407, 745, 861, 911, 1135, 1324, 1820, 2008
AjnI	CCWGG	4 cut(s)	20, 607, 927, 994
AjuI	GAANNNNNNNTTGG	4 cut(s)	2194, 2226, 2285, 2317
AloI	GAACNNNNNNTCC	2 cut(s)	953, 985
Alw26I	GTCTC	6 cut(s)	267, 436, 841, 1024, 1252, 1946
AlwI	GGATC	4 cut(s)	969, 1822, 1931, 2340
AlwNI	CAGNNNCTG	3 cut(s)	934, 1841, 1844
Ama87I	CYCGRG	1 cut(s)	1441
AoxI	GGCC	1 cut(s)	877
ApeKI	GCWGC	7 cut(s)	518, 692, 938, 1619, 1838, 1841, 1877
ApoI	RAATTY	2 cut(s)	1318, 1414
Asp700I	GAANNNNTTC	2 cut(s)	1928, 2300
AspLEI	GCGC	2 cut(s)	153, 1056
AspS9I	GGNCC	1 cut(s)	180
AsuC2I	CCSGG	1 cut(s)	1882
AsuHPI	GGTGA	6 cut(s)	242, 383, 1355, 1381, 1495, 1768
AsuII	TTCGAA	1 cut(s)	113
AvaI	CYCGRG	1 cut(s)	1441
AvaII	GGWCC	1 cut(s)	180
BaeI	ACNNNNGTAYC	2 cut(s)	531, 564
BanI	GGYRCC	2 cut(s)	1003, 1535
BanII	GRGCYC	1 cut(s)	928
BbsI	GAAGAC	2 cut(s)	637, 2181
BbvI	GCAGC	7 cut(s)	505, 704, 950, 1631, 1828, 1850, 1864
BccI	CCATC	9 cut(s)	329, 356, 469, 511, 620, 823, 1225, 1526, 1560
BceAI	ACGGC	2 cut(s)	78, 1534
BciT130I	CCWGG	4 cut(s)	22, 609, 929, 996
BciVI	GTATCC	1 cut(s)	1438
BclI	TGATCA	1 cut(s)	1719
BcnI	CCSGG	1 cut(s)	1882
BcoDI	GTCTC	6 cut(s)	267, 436, 841, 1024, 1252, 1946
BfaI	CTAG	8 cut(s)	330, 351, 525, 582, 618, 702, 1067, 1691
BfmI	CTRYAG	4 cut(s)	204, 840, 1611, 1896
BfuAI	ACCTGC	2 cut(s)	375, 1618
BfuI	GTATCC	1 cut(s)	1438
BglI	GCCNNNNNGGC	1 cut(s)	885
BglII	AGATCT	3 cut(s)	200, 593, 1198
BisI	GCNGC	9 cut(s)	91, 154, 519, 693, 939, 1620, 1839, 1842, 1878
BlpI	GCTNAGC	1 cut(s)	1845
BlsI	GCNGC	9 cut(s)	92, 155, 520, 694, 940, 1621, 1840, 1843, 1879
Bme1390I	CCNGG	5 cut(s)	22, 609, 929, 996, 1882
Bme18I	GGWCC	1 cut(s)	180
BmeT110I	CYCGRG	1 cut(s)	1441
BmgT120I	GGNCC	1 cut(s)	180
BmiI	GGNNCC	7 cut(s)	26, 481, 606, 1005, 1464, 1537, 1740
BmrFI	CCNGG	5 cut(s)	22, 609, 929, 996, 1882
BmrI	ACTGGG	2 cut(s)	2152, 2338
BmsI	GCATC	8 cut(s)	256, 412, 1051, 1153, 1300, 1480, 1597, 2299
BmuI	ACTGGG	2 cut(s)	2152, 2338
BoxI	GACNNNNGTC	1 cut(s)	637
BpiI	GAAGAC	2 cut(s)	637, 2181
Bpu10I	CCTNAGC	1 cut(s)	1389
Bpu1102I	GCTNAGC	1 cut(s)	1845
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	411
BpuMI	CCSGG	1 cut(s)	1882
BsaBI	GATNNNNATC	3 cut(s)	42, 129, 1407
BsaHI	GRCGYC	2 cut(s)	88, 1687
BsaI	GGTCTC	3 cut(s)	267, 1024, 1252
BsaJI	CCNNGG	3 cut(s)	183, 927, 1458
BsaWI	WCCGGW	1 cut(s)	1033
BsaXI	ACNNNNNCTCC	4 cut(s)	16, 46, 811, 841
Bsc4I	CCNNNNNNNGG	4 cut(s)	464, 648, 875, 934
Bse1I	ACTGG	7 cut(s)	462, 880, 1194, 1279, 1389, 2147, 2333
Bse8I	GATNNNNATC	3 cut(s)	42, 129, 1407
BseBI	CCWGG	4 cut(s)	22, 609, 929, 996
BseDI	CCNNGG	3 cut(s)	183, 927, 1458
BseGI	GGATG	9 cut(s)	340, 400, 574, 1066, 1236, 1495, 1588, 2068, 2314
BseJI	GATNNNNATC	3 cut(s)	42, 129, 1407
BseLI	CCNNNNNNNGG	4 cut(s)	464, 648, 875, 934
BseMII	CTCAG	4 cut(s)	426, 1023, 1247, 1836
BseNI	ACTGG	7 cut(s)	462, 880, 1194, 1279, 1389, 2147, 2333
BseRI	GAGGAG	4 cut(s)	307, 391, 394, 1614
BseXI	GCAGC	7 cut(s)	505, 704, 950, 1631, 1828, 1850, 1864
BseYI	CCCAGC	1 cut(s)	647
Bsh1236I	CGCG	3 cut(s)	102, 153, 1056
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	1 cut(s)	879
BshNI	GGYRCC	2 cut(s)	1003, 1535
BsiEI	CGRYCG	1 cut(s)	40
BsiHKCI	CYCGRG	1 cut(s)	1441
BsiSI	CCGG	2 cut(s)	1034, 1882
BslFI	GGGAC	3 cut(s)	42, 1424, 1581
BslI	CCNNNNNNNGG	4 cut(s)	464, 648, 875, 934
BsmAI	GTCTC	6 cut(s)	267, 436, 841, 1024, 1252, 1946
BsmBI	CGTCTC	1 cut(s)	1946
BsmFI	GGGAC	3 cut(s)	42, 1424, 1581
BsmI	GAATGC	3 cut(s)	1879, 2026, 2276
BsnI	GGCC	1 cut(s)	879
Bso31I	GGTCTC	3 cut(s)	267, 1024, 1252
BsoBI	CYCGRG	1 cut(s)	1441
Bsp119I	TTCGAA	1 cut(s)	113
Bsp1286I	GDGCHC	1 cut(s)	928
Bsp1407I	TGTACA	2 cut(s)	1968, 2263
Bsp1720I	GCTNAGC	1 cut(s)	1845
BspACI	CCGC	5 cut(s)	91, 100, 153, 1831, 2199
BspANI	GGCC	1 cut(s)	879
BspCNI	CTCAG	4 cut(s)	427, 1022, 1248, 1837
BspFNI	CGCG	3 cut(s)	102, 153, 1056
BspHI	TCATGA	1 cut(s)	598
BspLI	GGNNCC	7 cut(s)	26, 481, 606, 1005, 1464, 1537, 1740
BspMAI	CTGCAG	2 cut(s)	1615, 1900
BspMI	ACCTGC	2 cut(s)	375, 1618
BspPI	GGATC	4 cut(s)	969, 1822, 1931, 2340
BspT104I	TTCGAA	1 cut(s)	113
BspT107I	GGYRCC	2 cut(s)	1003, 1535
BspTNI	GGTCTC	3 cut(s)	267, 1024, 1252
BsrGI	TGTACA	2 cut(s)	1968, 2263
BsrI	ACTGG	7 cut(s)	462, 880, 1194, 1279, 1389, 2147, 2333
BssECI	CCNNGG	3 cut(s)	183, 927, 1458
BssNI	GRCGYC	2 cut(s)	88, 1687
BssT1I	CCWWGG	2 cut(s)	183, 1458
Bst2UI	CCWGG	4 cut(s)	22, 609, 929, 996
Bst4CI	ACNGT	4 cut(s)	32, 140, 1021, 1948
Bst6I	CTCTTC	3 cut(s)	187, 312, 2142
BstACI	GRCGYC	2 cut(s)	88, 1687
BstAUI	TGTACA	2 cut(s)	1968, 2263
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	4 cut(s)	886, 924, 936, 1377
BstDEI	CTNAG	9 cut(s)	435, 543, 774, 1009, 1124, 1256, 1389, 1845, 2350
BstF5I	GGATG	9 cut(s)	340, 400, 574, 1066, 1236, 1495, 1588, 2068, 2314
BstFNI	CGCG	3 cut(s)	102, 153, 1056
BstHHI	GCGC	2 cut(s)	153, 1056
BstMAI	GTCTC	6 cut(s)	267, 436, 841, 1024, 1252, 1946
BstMCI	CGRYCG	1 cut(s)	40
BstNI	CCWGG	4 cut(s)	22, 609, 929, 996
BstPAI	GACNNNNGTC	1 cut(s)	637
BstSCI	CCNGG	5 cut(s)	20, 607, 927, 994, 1880
BstSFI	CTRYAG	4 cut(s)	204, 840, 1611, 1896
BstUI	CGCG	3 cut(s)	102, 153, 1056
BstV1I	GCAGC	7 cut(s)	505, 704, 950, 1631, 1828, 1850, 1864
BstV2I	GAAGAC	2 cut(s)	637, 2181
BstX2I	RGATCY	5 cut(s)	200, 593, 1198, 1827, 2332
BstYI	RGATCY	5 cut(s)	200, 593, 1198, 1827, 2332
BsuI	GTATCC	1 cut(s)	1438
BsuRI	GGCC	1 cut(s)	879
BtgZI	GCGATG	1 cut(s)	117
BtsCI	GGATG	9 cut(s)	340, 400, 574, 1066, 1236, 1495, 1588, 2068, 2314
BtsI	GCAGTG	2 cut(s)	533, 2286
BtsIMutI	CAGTG	3 cut(s)	469, 533, 2286
BveI	ACCTGC	2 cut(s)	375, 1618
Cac8I	GCNNGC	4 cut(s)	886, 924, 936, 1377
CaiI	CAGNNNCTG	3 cut(s)	934, 1841, 1844
CciI	TCATGA	1 cut(s)	598
CfoI	GCGC	2 cut(s)	153, 1056
Cfr13I	GGNCC	1 cut(s)	180
CseI	GACGC	3 cut(s)	96, 107, 1676
Csp6I	GTAC	4 cut(s)	621, 1128, 1969, 2264
CviAII	CATG	4 cut(s)	254, 599, 2261, 2305
CviQI	GTAC	4 cut(s)	621, 1128, 1969, 2264
DdeI	CTNAG	9 cut(s)	435, 543, 774, 1009, 1124, 1256, 1389, 1845, 2350
DraIII	CACNNNGTG	1 cut(s)	77
DrdI	GACNNNNNNGTC	1 cut(s)	1960
DseDI	GACNNNNNNGTC	1 cut(s)	1960
Eam1104I	CTCTTC	3 cut(s)	187, 312, 2142
EarI	CTCTTC	3 cut(s)	187, 312, 2142
EciI	GGCGGA	1 cut(s)	2214
Eco130I	CCWWGG	2 cut(s)	183, 1458
Eco24I	GRGCYC	1 cut(s)	928
Eco31I	GGTCTC	3 cut(s)	267, 1024, 1252
Eco32I	GATATC	1 cut(s)	558
Eco47I	GGWCC	1 cut(s)	180
Eco57I	CTGAAG	5 cut(s)	768, 782, 1385, 1577, 1812
Eco88I	CYCGRG	1 cut(s)	1441
EcoRII	CCWGG	4 cut(s)	20, 607, 927, 994
EcoRV	GATATC	1 cut(s)	558
EcoT14I	CCWWGG	2 cut(s)	183, 1458
EcoT38I	GRGCYC	1 cut(s)	928
ErhI	CCWWGG	2 cut(s)	183, 1458
Esp3I	CGTCTC	1 cut(s)	1946
FaeI	CATG	4 cut(s)	257, 602, 2264, 2308
FaqI	GGGAC	3 cut(s)	42, 1424, 1581
FatI	CATG	4 cut(s)	253, 598, 2260, 2304
FbaI	TGATCA	1 cut(s)	1719
Fnu4HI	GCNGC	9 cut(s)	91, 154, 519, 693, 939, 1620, 1839, 1842, 1878
FokI	GGATG	9 cut(s)	347, 407, 581, 1073, 1243, 1502, 1575, 2075, 2321
FriOI	GRGCYC	1 cut(s)	928
Fsp4HI	GCNGC	9 cut(s)	91, 154, 519, 693, 939, 1620, 1839, 1842, 1878
FspBI	CTAG	8 cut(s)	330, 351, 525, 582, 618, 702, 1067, 1691
GlaI	GCGC	2 cut(s)	152, 1055
GluI	GCNGC	9 cut(s)	91, 154, 519, 693, 939, 1620, 1839, 1842, 1878
GsaI	CCCAGC	1 cut(s)	651
HaeIII	GGCC	1 cut(s)	879
HapII	CCGG	2 cut(s)	1034, 1882
HgaI	GACGC	3 cut(s)	96, 107, 1676
HhaI	GCGC	2 cut(s)	153, 1056
Hin1I	GRCGYC	2 cut(s)	88, 1687
Hin1II	CATG	4 cut(s)	257, 602, 2264, 2308
Hin6I	GCGC	2 cut(s)	151, 1054
HinP1I	GCGC	2 cut(s)	151, 1054
HincII	GTYRAC	1 cut(s)	1141
HindII	GTYRAC	1 cut(s)	1141
HindIII	AAGCTT	3 cut(s)	510, 1814, 1925
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	2 cut(s)	1034, 1882
HphI	GGTGA	6 cut(s)	242, 383, 1355, 1381, 1495, 1768
Hpy166II	GTNNAC	6 cut(s)	642, 1141, 1853, 1969, 2266, 2323
Hpy8I	GTNNAC	6 cut(s)	642, 1141, 1853, 1969, 2266, 2323
Hpy99I	CGWCG	1 cut(s)	123
HpyCH4III	ACNGT	4 cut(s)	32, 140, 1021, 1948
HpyCH4IV	ACGT	4 cut(s)	76, 1267, 1435, 1906
HpyCH4V	TGCA	8 cut(s)	662, 721, 1025, 1064, 1493, 1613, 1898, 2024
HpyF3I	CTNAG	9 cut(s)	435, 543, 774, 1009, 1124, 1256, 1389, 1845, 2350
HpySE526I	ACGT	4 cut(s)	76, 1267, 1435, 1906
Hsp92I	GRCGYC	2 cut(s)	88, 1687
Hsp92II	CATG	4 cut(s)	257, 602, 2264, 2308
HspAI	GCGC	2 cut(s)	151, 1054
Ksp22I	TGATCA	1 cut(s)	1719
KspAI	GTTAAC	1 cut(s)	1141
LmnI	GCTCC	9 cut(s)	24, 294, 381, 479, 931, 979, 1360, 1462, 1627
Lsp1109I	GCAGC	7 cut(s)	505, 704, 950, 1631, 1828, 1850, 1864
LweI	GCATC	8 cut(s)	256, 412, 1051, 1153, 1300, 1480, 1597, 2299
MaeI	CTAG	8 cut(s)	330, 351, 525, 582, 618, 702, 1067, 1691
MaeII	ACGT	4 cut(s)	76, 1267, 1435, 1906
MaeIII	GTNAC	5 cut(s)	32, 95, 469, 1105, 2275
MfeI	CAATTG	1 cut(s)	716
MflI	RGATCY	5 cut(s)	200, 593, 1198, 1827, 2332
MhlI	GDGCHC	1 cut(s)	928
MluCI	AATT	5 cut(s)	716, 1318, 1414, 1467, 2344
MlyI	GAGTC	2 cut(s)	64, 1342
MmeI	TCCRAC	2 cut(s)	482, 1964
MroXI	GAANNNNTTC	2 cut(s)	1928, 2300
MseI	TTAA	8 cut(s)	918, 984, 1140, 1179, 1329, 1644, 1772, 2039
MslI	CAYNNNNRTG	4 cut(s)	252, 1092, 1229, 1341
MspA1I	CMGCKG	2 cut(s)	647, 1841
MspI	CCGG	2 cut(s)	1034, 1882
MspR9I	CCNGG	5 cut(s)	22, 609, 929, 996, 1882
MunI	CAATTG	1 cut(s)	716
Mva1269I	GAATGC	3 cut(s)	1879, 2026, 2276
MvaI	CCWGG	4 cut(s)	22, 609, 929, 996
MvnI	CGCG	3 cut(s)	102, 153, 1056
NciI	CCSGG	1 cut(s)	1882
NlaIII	CATG	4 cut(s)	257, 602, 2264, 2308
NlaIV	GGNNCC	7 cut(s)	26, 481, 606, 1005, 1464, 1537, 1740
NmuCI	GTSAC	4 cut(s)	32, 95, 1105, 2275
NspV	TTCGAA	1 cut(s)	113
PagI	TCATGA	1 cut(s)	598
PaqCI	CACCTGC	1 cut(s)	1618
PcsI	WCGNNNNNNNCGW	1 cut(s)	1952
PctI	GAATGC	3 cut(s)	1879, 2026, 2276
PdmI	GAANNNNTTC	2 cut(s)	1928, 2300
PflMI	CCANNNNNTGG	3 cut(s)	464, 875, 934
PfoI	TCCNGGA	3 cut(s)	20, 607, 994
PkrI	GCNGC	9 cut(s)	92, 155, 520, 694, 940, 1621, 1840, 1843, 1879
Ple19I	CGATCG	1 cut(s)	40
PleI	GAGTC	2 cut(s)	63, 1341
PpsI	GAGTC	2 cut(s)	63, 1341
PshAI	GACNNNNGTC	1 cut(s)	637
Psp6I	CCWGG	4 cut(s)	20, 607, 927, 994
PspFI	CCCAGC	1 cut(s)	647
PspGI	CCWGG	4 cut(s)	20, 607, 927, 994
PspN4I	GGNNCC	7 cut(s)	26, 481, 606, 1005, 1464, 1537, 1740
PspPI	GGNCC	1 cut(s)	180
PstI	CTGCAG	2 cut(s)	1615, 1900
PstNI	CAGNNNCTG	3 cut(s)	934, 1841, 1844
PsuI	RGATCY	5 cut(s)	200, 593, 1198, 1827, 2332
PvuI	CGATCG	1 cut(s)	40
PvuII	CAGCTG	2 cut(s)	647, 1841
RsaI	GTAC	4 cut(s)	622, 1129, 1970, 2265
RsaNI	GTAC	4 cut(s)	621, 1128, 1969, 2264
RseI	CAYNNNNRTG	4 cut(s)	252, 1092, 1229, 1341
SaqAI	TTAA	8 cut(s)	918, 984, 1140, 1179, 1329, 1644, 1772, 2039
SatI	GCNGC	9 cut(s)	91, 154, 519, 693, 939, 1620, 1839, 1842, 1878
Sau96I	GGNCC	1 cut(s)	180
SchI	GAGTC	2 cut(s)	64, 1342
ScrFI	CCNGG	5 cut(s)	22, 609, 929, 996, 1882
SduI	GDGCHC	1 cut(s)	928
SfaNI	GCATC	8 cut(s)	256, 412, 1051, 1153, 1300, 1480, 1597, 2299
SfcI	CTRYAG	4 cut(s)	204, 840, 1611, 1896
SfuI	TTCGAA	1 cut(s)	113
SinI	GGWCC	1 cut(s)	180
SmiMI	CAYNNNNRTG	4 cut(s)	252, 1092, 1229, 1341
SmlI	CTYRAG	1 cut(s)	426
SmoI	CTYRAG	1 cut(s)	426
Sse9I	AATT	5 cut(s)	716, 1318, 1414, 1467, 2344
SsiI	CCGC	5 cut(s)	91, 100, 153, 1831, 2199
SspMI	CTAG	8 cut(s)	330, 351, 525, 582, 618, 702, 1067, 1691
StyD4I	CCNGG	5 cut(s)	20, 607, 927, 994, 1880
StyI	CCWWGG	2 cut(s)	183, 1458
TaaI	ACNGT	4 cut(s)	32, 140, 1021, 1948
TaiI	ACGT	4 cut(s)	79, 1270, 1438, 1909
TaqI	TCGA	9 cut(s)	46, 53, 113, 146, 290, 554, 818, 964, 1932
TasI	AATT	5 cut(s)	716, 1318, 1414, 1467, 2344
TatI	WGTACW	4 cut(s)	620, 1127, 1968, 2263
TauI	GCSGC	2 cut(s)	93, 156
Tru1I	TTAA	8 cut(s)	918, 984, 1140, 1179, 1329, 1644, 1772, 2039
Tru9I	TTAA	8 cut(s)	918, 984, 1140, 1179, 1329, 1644, 1772, 2039
TscAI	CASTG	3 cut(s)	469, 540, 2293
TseFI	GTSAC	4 cut(s)	32, 95, 1105, 2275
TseI	GCWGC	7 cut(s)	518, 692, 938, 1619, 1838, 1841, 1877
Tsp45I	GTSAC	4 cut(s)	32, 95, 1105, 2275
TspGWI	ACGGA	4 cut(s)	581, 1104, 2075, 2294
TspRI	CASTG	3 cut(s)	469, 540, 2293
Van91I	CCANNNNNTGG	3 cut(s)	464, 875, 934
VpaK11BI	GGWCC	1 cut(s)	180
XapI	RAATTY	2 cut(s)	1318, 1414
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1479
XmnI	GAANNNNTTC	2 cut(s)	1928, 2300
XspI	CTAG	8 cut(s)	330, 351, 525, 582, 618, 702, 1067, 1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.