U4 U6 small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28060 AT1G28060 AT1G28060 AT3G55930 |
| fragaria_vesca | FvH4_2g04410 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 |
| malus_domestica | MD01G1117500.v1.1 MD07G1185000.v1.1 |
| prunus_persica | Prupe.2G224900_v2.0.a1 Prupe.2G224900_v2.0.a1 Prupe.6G042200_v2.0.a1 |
| pyrus_communis | pycom01g14520 pycom07g17720 |
| rosa_chinensis | RchiOBHm_Chr1g0365041 |
| rosa_laevigata | RLG00000027448 |
| rosa_multiflora | Rmu_sc0002451.1_g000035 |
| rosa_roxburghii | Rroxscaffold_4G00291520 Rroxscaffold_4G00291970 |
| rosa_rugosa | Rorug01G0319100 Rorug01G0319200 |
| rosa_samantha | Rh1AG188900 Rh1AG328200 Rh1BG289700 Rh1CG174500 Rh1CG306300 Rh1DG163200 Rh1DG321100 Rh4DG027000 |
| rosa_wichuraiana | Rw1G029120 Rw2G017970 Rw3G016000 Rw4G013150 Rw5G015830 Rw5G032310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 69 |
| AciI | CCGC | 1 cut(s) | 287 |
| AclWI | GGATC | 1 cut(s) | 276 |
| AcuI | CTGAAG | 2 cut(s) | 102, 237 |
| AgsI | TTSAA | 1 cut(s) | 187 |
| AluBI | AGCT | 3 cut(s) | 86, 183, 221 |
| AluI | AGCT | 3 cut(s) | 86, 183, 221 |
| AlwI | GGATC | 1 cut(s) | 276 |
| ApeKI | GCWGC | 3 cut(s) | 27, 221, 224 |
| AspLEI | GCGC | 1 cut(s) | 69 |
| AsuC2I | CCSGG | 1 cut(s) | 229 |
| BauI | CACGAG | 1 cut(s) | 203 |
| BbvI | GCAGC | 3 cut(s) | 39, 208, 211 |
| BcnI | CCSGG | 1 cut(s) | 229 |
| BisI | GCNGC | 3 cut(s) | 28, 222, 225 |
| BlsI | GCNGC | 3 cut(s) | 29, 223, 226 |
| Bme1390I | CCNGG | 1 cut(s) | 229 |
| BmrFI | CCNGG | 1 cut(s) | 229 |
| BmrI | ACTGGG | 1 cut(s) | 85 |
| BmsI | GCATC | 1 cut(s) | 235 |
| BmuI | ACTGGG | 1 cut(s) | 85 |
| Bpu10I | CCTNAGC | 2 cut(s) | 51, 62 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| BpuMI | CCSGG | 1 cut(s) | 229 |
| Bse1I | ACTGG | 1 cut(s) | 80 |
| BseGI | GGATG | 1 cut(s) | 295 |
| BseNI | ACTGG | 1 cut(s) | 80 |
| BseXI | GCAGC | 3 cut(s) | 39, 208, 211 |
| Bsh1236I | CGCG | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 229 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspACI | CCGC | 1 cut(s) | 287 |
| BspFNI | CGCG | 1 cut(s) | 69 |
| BspPI | GGATC | 1 cut(s) | 276 |
| BsrI | ACTGG | 1 cut(s) | 80 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssSI | CACGAG | 1 cut(s) | 203 |
| Bst2BI | CACGAG | 1 cut(s) | 203 |
| BstC8I | GCNNGC | 2 cut(s) | 135, 250 |
| BstDEI | CTNAG | 2 cut(s) | 51, 62 |
| BstF5I | GGATG | 1 cut(s) | 295 |
| BstFNI | CGCG | 1 cut(s) | 69 |
| BstHHI | GCGC | 1 cut(s) | 69 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 254 |
| BstSCI | CCNGG | 1 cut(s) | 227 |
| BstUI | CGCG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 3 cut(s) | 39, 208, 211 |
| BstX2I | RGATCY | 1 cut(s) | 268 |
| BstYI | RGATCY | 1 cut(s) | 268 |
| BtsCI | GGATG | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 2 cut(s) | 135, 250 |
| CfoI | GCGC | 1 cut(s) | 69 |
| CviAII | CATG | 1 cut(s) | 211 |
| CviJI | RGCY | 5 cut(s) | 80, 86, 133, 183, 221 |
| CviKI_1 | RGCY | 5 cut(s) | 80, 86, 133, 183, 221 |
| DdeI | CTNAG | 2 cut(s) | 51, 62 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 2 cut(s) | 102, 237 |
| FaeI | CATG | 1 cut(s) | 214 |
| FaiI | YATR | 4 cut(s) | 48, 59, 157, 212 |
| FatI | CATG | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 3 cut(s) | 28, 222, 225 |
| Fsp4HI | GCNGC | 3 cut(s) | 28, 222, 225 |
| GlaI | GCGC | 1 cut(s) | 68 |
| GluI | GCNGC | 3 cut(s) | 28, 222, 225 |
| HapII | CCGG | 1 cut(s) | 229 |
| HhaI | GCGC | 1 cut(s) | 69 |
| Hin1II | CATG | 1 cut(s) | 214 |
| Hin6I | GCGC | 1 cut(s) | 67 |
| HinP1I | GCGC | 1 cut(s) | 67 |
| HinfI | GANTC | 1 cut(s) | 32 |
| HpaII | CCGG | 1 cut(s) | 229 |
| Hpy166II | GTNNAC | 3 cut(s) | 73, 121, 202 |
| Hpy188III | TCNNGA | 2 cut(s) | 203, 272 |
| Hpy8I | GTNNAC | 3 cut(s) | 73, 121, 202 |
| HpyCH4V | TGCA | 1 cut(s) | 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 254 |
| HpyF3I | CTNAG | 2 cut(s) | 51, 62 |
| Hsp92II | CATG | 1 cut(s) | 214 |
| HspAI | GCGC | 1 cut(s) | 67 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LpnPI | CCDG | 5 cut(s) | 61, 147, 187, 234, 242 |
| Lsp1109I | GCAGC | 3 cut(s) | 39, 208, 211 |
| LweI | GCATC | 1 cut(s) | 235 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 3 cut(s) | 110, 113, 244 |
| MflI | RGATCY | 1 cut(s) | 268 |
| MluCI | AATT | 1 cut(s) | 280 |
| MnlI | CCTC | 3 cut(s) | 14, 36, 268 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspI | CCGG | 1 cut(s) | 229 |
| MspR9I | CCNGG | 1 cut(s) | 229 |
| MvnI | CGCG | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 254 |
| NciI | CCSGG | 1 cut(s) | 229 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 1 cut(s) | 214 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PkrI | GCNGC | 3 cut(s) | 29, 223, 226 |
| PsuI | RGATCY | 1 cut(s) | 268 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| SatI | GCNGC | 3 cut(s) | 28, 222, 225 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| ScrFI | CCNGG | 1 cut(s) | 229 |
| SetI | ASST | 7 cut(s) | 25, 47, 57, 88, 185, 223, 279 |
| SfaNI | GCATC | 1 cut(s) | 235 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| Sse9I | AATT | 1 cut(s) | 280 |
| SsiI | CCGC | 1 cut(s) | 287 |
| StyD4I | CCNGG | 1 cut(s) | 227 |
| TaqII | GACCGA | 1 cut(s) | 193 |
| TasI | AATT | 1 cut(s) | 280 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TseI | GCWGC | 3 cut(s) | 27, 221, 224 |
| TspDTI | ATGAA | 2 cut(s) | 17, 111 |