Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003039

Physical Location & Seq

Genomic Coordinates Reverse (-)

25212461 .. 25217082

Gene Structure 4622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G224900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGGAGAAAGAGAGATCGAGCAAACGCCACCGCGAAGATCGAGACAGAGACCACCACAAGCATCGCAGCCGTGACGCCGATGAAAAGCGATCATCAAAGGACTCCGATAACCATCGCCACCACCATCGATCGGACCGCGATTCCAAGCGCGAGCGCTCTCACGAGCCCCGAGACCACAAATCTCGTCGCGAAAGGTCACGCGAGCCGAGCGACGACCGCGATATAGCACGTGACCAACGGGAGCGGTCCTACGACCCGAGGGGCGAGAGAGAGGGGAGCCGAGAGAGGTCCAGGCATCGCGAAACGAAGCGCGAGAGGTCGGAAGAGAGAGAGGAATATAGACGTAAGAGGAAAGAGAGGGAGAGGAGTGAGGGTAGAGATGGGGATGTTGTTGATTTTGACGATAAGAAGAGGGCTAGGGTTTCGGAGGAGGAGAGGAAAGATAGGAAGCGATTTGAGGAAGATGGGAAGGAATTGAATGGAGGTCAGAGACAGAGTAGGAGGTTTGAAGACCGTCGAGTGAAGGAAGAAGAGGATGGTGATTATGGCGGAGCCGTTGAACGCAGCAATGAATTGAATGTGAATGCAAGTGAGGTTAAGAAAGAGGAAGTGGGTGATTACCAGCTTGGTAATTTTCAGGGCGACACCACCACCCCAAATGGGAGTGGTTGGATGGGTAATGGTGCTGCTCTGGAACCTACTAACGCATCAAGGATTGTGCCTGAGACCTCTTTCGCACCTAGTCATCCCCTTCCTACCAAGGTATCTTCGATTTATACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGAACATCTTCAACTGCTGGGAGAAGTGGGAATCTGTCTCTTGATGATGTAGAAAAAATTAAGAAAGCTTTACAAAAGCAGAAGGAATTGACTGAGAAGCTGAAGAAGATTCCCCAGTTGAACAAGGGTGCCAATGCAAGAAAAGATGCTAGCCAGAACTTGGGATCAAAGGAGCTGAAACCACCATCTGCCACTGCTGGAATACTGCATGCACCGGCCCCATCAACAACTGGTGGTACAGCTGCTCCAGGGGTAAGATTTGATTCATCAAAACTACCCATTGCACCAGCAGCTTCGTCTACAAGTGGCGTGATTGCAGAAGCTGGCCTTACAGCCGTTCCCAACCTTGAAGCTGTTAAAAAAGCACAGGAGCTTGCTGCCAGTATGGGTTTCCGCCAGGACCCCCAGTTTGCTCCTCTTATAAACTTGTTTCCAGGACAGGTGGCAACTGATGTTGCTGCCCCTCAGAAGCCTACTAAGGCCCCTGTTCTTCGTCTTGATGCCCTTGGAAGGGAAATAGATGAACTTGGAAATTTAGTGAATGCGACTAAACCAAACAACCTCAGCACTCTAAAGGTCAATATTAACAAACAGAAGAAAGATGCATTCCAAATTCTTAAACCTGAATTGGATGTGGATCCTGAATCAAATCCCTTTTTTGATCCAATGATGGGTATTAATAAAACCAAGATTTTGAGGCCAAAGAGGATGAATTTCCAGTTTGTAGAGGAAGGAAAATGGTCAAGAGATGCTGAGCATATAAAGTTGAAGAGTAAATTTGGAGAAGCACAAGCCAAAGAGCAAAAGGCGAAGCAGGCACAGTTGGCAAAGGCAAAGGCAGCACCAGATATTAATCCAAATTTGATAGAGGTATCAGAGAGAGTTATCACCAAAGAAAAACCAAAGGATCCAATTCCTGAAATTGAGTGGTGGGATGTGCCCCTATTGCACTCTGGTACTTATAATGAAGTCATTGATGGCGCAGTAGTGGAAAATAAATTAAAGACGGAGAAAATCACCATCTATGTTGAACATCCTCAGCCTATCGAGCCCCCCACTGAGCCAGCCCCTCCACCGCCTCAACCACTGAAGCTGACCAAGAAGGAGCAGAAAAAACTCCGTACACAGAAACGCCTGGCCAGAGAGAAAGATAGGCAGGAGATGATTAGACAAGGCCTGATCGAACCCCCAAAGCCAAAAGTGAAAATGAGTAATTTGATGAAAGTTCTTGGCTCTGAAGCAACCCAAGATCCAACCAGGCTTGAAAAGGAGATTCGGAGTGCAGCTGCTGAGCGTGAACAAGCTCATATAGACAGGAATATTGCACGAAAGCTCACTCCTGCCGAGCGCCGTGAGAAGAAAGAAAGGAAGCTTTTTGATGACCCAAATAATGTGGAGACCATAGTCTCAGTTTACAGGATCAATGAACTGTCACATCCAAAGGCCCGCTTCAAGATTGATGTTAATGCACGAGAGAACCGGCTGACTGGATCAGCTGTGATCTCAGATGGTATGAATGTAGTGGTTGTTGAAGGTGGCAGCAAATCTATTAAGAGGTATGCTAAGGTTATGCTTAGGCGCATAAACTGGGCTGAAGCTGTAAAAGATGAAGAAGAAGAAGATGACGATGTAAACAATGATAAGCCTGCTAACAAGTGTGTGTTAGTATGGCAAGGAAGTGTTGCCAGACCGTGCTTCAATAGATTTTCTGTTCATGAGTGCATGACTGAAGCTGCTGCCCGGAAGATTTTTGCTGATGCTGGCGTTGCTCATTATTGGGATCTTGCAGTCAATTTTGCAGATGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022414 GO:0030532 GO:0031323 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046540 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097525 GO:0097526 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF1115 PRP3

Protein Analysis

886

Amino Acids

100.16

Weight (kDa)

9.26

Isoelectric Point (pI)

52.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003039)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28060 AT1G28060 AT1G28060 AT3G55930
fragaria_vesca	FvH4_2g04410 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820 FvH4_7g20820
malus_domestica	MD01G1117500.v1.1 MD07G1185000.v1.1
prunus_persica	Prupe.2G224900_v2.0.a1 Prupe.2G224900_v2.0.a1 Prupe.6G042200_v2.0.a1
pyrus_communis	pycom01g14520 pycom07g17720
rosa_chinensis	RchiOBHm_Chr1g0365041
rosa_laevigata	RLG00000027448
rosa_multiflora	Rmu_sc0002451.1_g000035
rosa_roxburghii	Rroxscaffold_4G00291520 Rroxscaffold_4G00291970
rosa_rugosa	Rorug01G0319100 Rorug01G0319200
rosa_samantha	Rh1AG188900 Rh1AG328200 Rh1BG289700 Rh1CG174500 Rh1CG306300 Rh1DG163200 Rh1DG321100 Rh4DG027000
rosa_wichuraiana	Rw1G029120 Rw2G017970 Rw3G016000 Rw4G013150 Rw5G015830 Rw5G032310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1268, 1809
AccB1I	GGYRCC	1 cut(s)	974
AccB7I	CCANNNNNTGG	1 cut(s)	1006
AccBSI	CCGCTC	1 cut(s)	244
AccI	GTMKAC	1 cut(s)	1145
AccII	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
AciI	CCGC	8 cut(s)	31, 136, 217, 244, 549, 1240, 1922, 2293
AcoI	YGGCCR	1 cut(s)	1983
AcsI	RAATTY	5 cut(s)	1378, 1458, 1558, 1622, 1705
AcuI	CTGAAG	5 cut(s)	968, 1955, 2103, 2460, 2595
AcvI	CACGTG	1 cut(s)	230
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	4 cut(s)	841, 1084, 1804, 1969
AfeI	AGCGCT	1 cut(s)	155
AfiI	CCNNNNNNNGG	6 cut(s)	130, 660, 1006, 1356, 1357, 1517
AjnI	CCWGG	6 cut(s)	290, 1093, 1242, 1279, 1980, 2102
Alw26I	GTCTC	8 cut(s)	36, 42, 165, 484, 719, 888, 2237, 2257
AlwNI	CAGNNNCTG	2 cut(s)	1169, 2135
Ama87I	CYCGRG	2 cut(s)	168, 256
Aor51HI	AGCGCT	1 cut(s)	155
AoxI	GGCC	7 cut(s)	1062, 1171, 1326, 1544, 1983, 2020, 2289
ApoI	RAATTY	5 cut(s)	1378, 1458, 1558, 1622, 1705
ArsI	GACNNNNNNTTYG	2 cut(s)	1238, 1270
AseI	ATTAAT	2 cut(s)	1524, 1698
Asp700I	GAANNNNTTC	1 cut(s)	853
AspLEI	GCGC	6 cut(s)	150, 156, 312, 1829, 2196, 2427
AspS9I	GGNCC	7 cut(s)	133, 246, 288, 1063, 1246, 1327, 2290
AsuC2I	CCSGG	1 cut(s)	2587
AsuHPI	GGTGA	4 cut(s)	551, 626, 1726, 1855
AsuNHI	GCTAGC	1 cut(s)	995
AvaI	CYCGRG	2 cut(s)	168, 256
AvaII	GGWCC	4 cut(s)	133, 246, 288, 1246
BaeGI	GKGCMC	1 cut(s)	1788
BaeI	ACNNNNGTAYC	2 cut(s)	747, 780
BalI	TGGCCA	1 cut(s)	1985
BamHI	GGATCC	2 cut(s)	1483, 1753
BanI	GGYRCC	1 cut(s)	974
BanII	GRGCYC	2 cut(s)	168, 1899
BauI	CACGAG	2 cut(s)	161, 2316
BbrPI	CACGTG	1 cut(s)	230
BbsI	GAAGAC	1 cut(s)	516
BbvCI	CCTCAGC	2 cut(s)	1409, 1884
BceAI	ACGGC	4 cut(s)	54, 539, 1166, 2181
BciT130I	CCWGG	6 cut(s)	292, 1095, 1244, 1281, 1982, 2104
BcnI	CCSGG	1 cut(s)	2587
BcoDI	GTCTC	8 cut(s)	36, 42, 165, 484, 719, 888, 2237, 2257
BfaI	CTAG	4 cut(s)	417, 741, 837, 996
BfoI	RGCGCY	2 cut(s)	157, 2197
BglII	AGATCT	1 cut(s)	812
BlpI	GCTNAGC	2 cut(s)	1599, 2136
Bme1390I	CCNGG	7 cut(s)	292, 1095, 1244, 1281, 1982, 2104, 2587
Bme18I	GGWCC	4 cut(s)	133, 246, 288, 1246
BmeT110I	CYCGRG	2 cut(s)	168, 256
BmgT120I	GGNCC	7 cut(s)	133, 246, 288, 1063, 1246, 1327, 2290
BmiI	GGNNCC	9 cut(s)	278, 553, 696, 976, 1065, 1248, 1329, 1485, 1755
BmrFI	CCNGG	7 cut(s)	292, 1095, 1244, 1281, 1982, 2104, 2587
BmrI	ACTGGG	3 cut(s)	955, 1246, 2443
BmsI	GCATC	8 cut(s)	70, 304, 716, 982, 1336, 1438, 1585, 2593
BmtI	GCTAGC	1 cut(s)	999
BmuI	ACTGGG	3 cut(s)	955, 1246, 2443
BoxI	GACNNNNGTC	1 cut(s)	2249
BpiI	GAAGAC	1 cut(s)	516
BpmI	CTGGAG	1 cut(s)	1077
Bpu10I	CCTNAGC	4 cut(s)	1409, 1884, 2409, 2420
Bpu1102I	GCTNAGC	2 cut(s)	1599, 2136
BpuMI	CCSGG	1 cut(s)	2587
Bsa29I	ATCGAT	1 cut(s)	127
BsaAI	YACGTR	1 cut(s)	230
BsaBI	GATNNNNATC	3 cut(s)	111, 1482, 1698
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	4 cut(s)	42, 165, 719, 2237
BsaJI	CCNNGG	4 cut(s)	257, 759, 1094, 1351
BsaXI	ACNNNNNCTCC	4 cut(s)	358, 388, 1075, 1105
Bsc4I	CCNNNNNNNGG	6 cut(s)	130, 660, 1006, 1356, 1357, 1517
Bse118I	RCCGGY	2 cut(s)	1060, 2325
Bse1I	ACTGG	7 cut(s)	961, 1081, 1227, 1252, 1564, 2338, 2438
Bse3DI	GCAATG	2 cut(s)	574, 1125
Bse8I	GATNNNNATC	3 cut(s)	111, 1482, 1698
BseBI	CCWGG	6 cut(s)	292, 1095, 1244, 1281, 1982, 2104
BseCI	ATCGAT	1 cut(s)	127
BseDI	CCNNGG	4 cut(s)	257, 759, 1094, 1351
BseGI	GGATG	9 cut(s)	391, 541, 678, 745, 1483, 1560, 1786, 1879, 2281
BseJI	GATNNNNATC	3 cut(s)	111, 1482, 1698
BseLI	CCNNNNNNNGG	6 cut(s)	130, 660, 1006, 1356, 1357, 1517
BseMI	GCAATG	2 cut(s)	574, 1125
BseNI	ACTGG	7 cut(s)	961, 1081, 1227, 1252, 1564, 2338, 2438
BseRI	GAGGAG	4 cut(s)	379, 443, 446, 1251
BseSI	GKGCMC	1 cut(s)	1788
BseYI	CCCAGC	1 cut(s)	863
BsgI	GTGCAG	1 cut(s)	2148
Bsh1236I	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
Bsh1285I	CGRYCG	2 cut(s)	131, 217
BshFI	GGCC	7 cut(s)	1064, 1173, 1328, 1546, 1985, 2022, 2291
BshNI	GGYRCC	1 cut(s)	974
BshVI	ATCGAT	1 cut(s)	127
BsiEI	CGRYCG	2 cut(s)	131, 217
BsiHKCI	CYCGRG	2 cut(s)	168, 256
BsiSI	CCGG	3 cut(s)	1061, 2326, 2587
BslI	CCNNNNNNNGG	6 cut(s)	130, 660, 1006, 1356, 1357, 1517
BsmAI	GTCTC	8 cut(s)	36, 42, 165, 484, 719, 888, 2237, 2257
BsmI	GAATGC	3 cut(s)	589, 1393, 1451
BsnI	GGCC	7 cut(s)	1064, 1173, 1328, 1546, 1985, 2022, 2291
Bso31I	GGTCTC	4 cut(s)	42, 165, 719, 2237
BsoBI	CYCGRG	2 cut(s)	168, 256
Bsp1286I	GDGCHC	3 cut(s)	168, 1788, 1899
Bsp1720I	GCTNAGC	2 cut(s)	1599, 2136
Bsp68I	TCGCGA	2 cut(s)	189, 300
BspACI	CCGC	8 cut(s)	31, 136, 217, 244, 549, 1240, 1922, 2293
BspANI	GGCC	7 cut(s)	1064, 1173, 1328, 1546, 1985, 2022, 2291
BspDI	ATCGAT	1 cut(s)	127
BspFNI	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
BspHI	TCATGA	2 cut(s)	817, 2560
BspLI	GGNNCC	9 cut(s)	278, 553, 696, 976, 1065, 1248, 1329, 1485, 1755
BspOI	GCTAGC	1 cut(s)	999
BspT107I	GGYRCC	1 cut(s)	974
BspTNI	GGTCTC	4 cut(s)	42, 165, 719, 2237
BsrBI	CCGCTC	1 cut(s)	244
BsrDI	GCAATG	2 cut(s)	574, 1125
BsrFI	RCCGGY	2 cut(s)	1060, 2325
BsrI	ACTGG	7 cut(s)	961, 1081, 1227, 1252, 1564, 2338, 2438
BssAI	RCCGGY	2 cut(s)	1060, 2325
BssECI	CCNNGG	4 cut(s)	257, 759, 1094, 1351
BssNI	GRCGYC	1 cut(s)	75
BssSI	CACGAG	2 cut(s)	161, 2316
BssT1I	CCWWGG	2 cut(s)	759, 1351
Bst2BI	CACGAG	2 cut(s)	161, 2316
Bst2UI	CCWGG	6 cut(s)	292, 1095, 1244, 1281, 1982, 2104
Bst4CI	ACNGT	4 cut(s)	515, 1668, 2277, 2538
Bst6I	CTCTTC	4 cut(s)	318, 404, 525, 1610
BstACI	GRCGYC	1 cut(s)	75
BstBAI	YACGTR	1 cut(s)	230
BstF5I	GGATG	9 cut(s)	391, 541, 678, 745, 1483, 1560, 1786, 1879, 2281
BstFNI	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
BstH2I	RGCGCY	2 cut(s)	157, 2197
BstHHI	GCGC	6 cut(s)	150, 156, 312, 1829, 2196, 2427
BstMAI	GTCTC	8 cut(s)	36, 42, 165, 484, 719, 888, 2237, 2257
BstMCI	CGRYCG	2 cut(s)	131, 217
BstMWI	GCNNNNNNNGC	9 cut(s)	207, 216, 1136, 1661, 1670, 1685, 1792, 1894, 2612
BstNI	CCWGG	6 cut(s)	292, 1095, 1244, 1281, 1982, 2104
BstNSI	RCATGY	1 cut(s)	1058
BstPAI	GACNNNNGTC	1 cut(s)	2249
BstSCI	CCNGG	7 cut(s)	290, 1093, 1242, 1279, 1980, 2102, 2585
BstSLI	GKGCMC	1 cut(s)	1788
BstUI	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
BstV2I	GAAGAC	1 cut(s)	516
BstX2I	RGATCY	5 cut(s)	812, 1483, 1753, 2095, 2626
BstYI	RGATCY	5 cut(s)	812, 1483, 1753, 2095, 2626
Bsu15I	ATCGAT	1 cut(s)	127
BsuRI	GGCC	7 cut(s)	1064, 1173, 1328, 1546, 1985, 2022, 2291
BsuTUI	ATCGAT	1 cut(s)	127
BtgZI	GCGATG	3 cut(s)	47, 98, 281
BtsCI	GGATG	9 cut(s)	391, 541, 678, 745, 1483, 1560, 1786, 1879, 2281
BtsI	GCAGTG	1 cut(s)	1038
BtsIMutI	CAGTG	3 cut(s)	1038, 1902, 1931
BtuMI	TCGCGA	2 cut(s)	189, 300
CaiI	CAGNNNCTG	2 cut(s)	1169, 2135
CciI	TCATGA	2 cut(s)	817, 2560
CfoI	GCGC	6 cut(s)	150, 156, 312, 1829, 2196, 2427
Cfr10I	RCCGGY	2 cut(s)	1060, 2325
Cfr13I	GGNCC	7 cut(s)	133, 246, 288, 1063, 1246, 1327, 2290
ClaI	ATCGAT	1 cut(s)	127
CpoI	CGGWCCG	1 cut(s)	133
CseI	GACGC	1 cut(s)	83
Csp6I	GTAC	4 cut(s)	840, 1083, 1803, 1968
CspCI	CAANNNNNGTGG	2 cut(s)	2220, 2255
CspI	CGGWCCG	1 cut(s)	133
CviAII	CATG	5 cut(s)	818, 827, 1055, 2561, 2569
CviQI	GTAC	4 cut(s)	840, 1083, 1803, 1968
EaeI	YGGCCR	1 cut(s)	1983
Eam1104I	CTCTTC	4 cut(s)	318, 404, 525, 1610
EarI	CTCTTC	4 cut(s)	318, 404, 525, 1610
EciI	GGCGGA	2 cut(s)	564, 1229
Eco130I	CCWWGG	2 cut(s)	759, 1351
Eco147I	AGGCCT	1 cut(s)	2022
Eco24I	GRGCYC	2 cut(s)	168, 1899
Eco31I	GGTCTC	4 cut(s)	42, 165, 719, 2237
Eco47I	GGWCC	4 cut(s)	133, 246, 288, 1246
Eco47III	AGCGCT	1 cut(s)	155
Eco57I	CTGAAG	5 cut(s)	968, 1955, 2103, 2460, 2595
Eco72I	CACGTG	1 cut(s)	230
Eco88I	CYCGRG	2 cut(s)	168, 256
EcoO109I	RGGNCCY	2 cut(s)	1246, 1327
EcoRII	CCWGG	6 cut(s)	290, 1093, 1242, 1279, 1980, 2102
EcoT14I	CCWWGG	2 cut(s)	759, 1351
EcoT22I	ATGCAT	1 cut(s)	1453
EcoT38I	GRGCYC	2 cut(s)	168, 1899
ErhI	CCWWGG	2 cut(s)	759, 1351
FaeI	CATG	5 cut(s)	821, 830, 1058, 2564, 2572
FalI	AAGNNNNNCTT	4 cut(s)	1158, 1190, 2279, 2311
FatI	CATG	5 cut(s)	817, 826, 1054, 2560, 2568
FauI	CCCGC	1 cut(s)	2300
FblI	GTMKAC	1 cut(s)	1145
FokI	GGATG	9 cut(s)	398, 548, 685, 732, 1490, 1567, 1793, 1866, 2268
FriOI	GRGCYC	2 cut(s)	168, 1899
FspBI	CTAG	4 cut(s)	417, 741, 837, 996
GlaI	GCGC	6 cut(s)	149, 155, 311, 1828, 2195, 2426
GsaI	CCCAGC	1 cut(s)	867
GsuI	CTGGAG	1 cut(s)	1077
HaeII	RGCGCY	2 cut(s)	157, 2197
HaeIII	GGCC	7 cut(s)	1064, 1173, 1328, 1546, 1985, 2022, 2291
HapII	CCGG	3 cut(s)	1061, 2326, 2587
HgaI	GACGC	1 cut(s)	83
HhaI	GCGC	6 cut(s)	150, 156, 312, 1829, 2196, 2427
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	5 cut(s)	821, 830, 1058, 2564, 2572
Hin6I	GCGC	6 cut(s)	148, 154, 310, 1827, 2194, 2425
HinP1I	GCGC	6 cut(s)	148, 154, 310, 1827, 2194, 2425
HindIII	AAGCTT	2 cut(s)	912, 2216
HinfI	GANTC	7 cut(s)	101, 140, 877, 955, 1109, 1490, 2119
HpaII	CCGG	3 cut(s)	1061, 2326, 2587
HphI	GGTGA	4 cut(s)	551, 626, 1726, 1855
Hpy166II	GTNNAC	5 cut(s)	1146, 1970, 2144, 2260, 2479
Hpy8I	GTNNAC	5 cut(s)	1146, 1970, 2144, 2260, 2479
Hpy99I	CGWCG	3 cut(s)	189, 215, 519
HpyAV	CCTTC	8 cut(s)	463, 517, 761, 922, 1350, 1571, 1942, 2372
HpyCH4III	ACNGT	4 cut(s)	515, 1668, 2277, 2538
HpyCH4IV	ACGT	2 cut(s)	229, 343
HpyF10VI	GCNNNNNNNGC	9 cut(s)	207, 216, 1136, 1661, 1670, 1685, 1792, 1894, 2612
HpySE526I	ACGT	2 cut(s)	229, 343
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	5 cut(s)	821, 830, 1058, 2564, 2572
HspAI	GCGC	6 cut(s)	148, 154, 310, 1827, 2194, 2425
LmnI	GCTCC	8 cut(s)	241, 276, 551, 1018, 1096, 1216, 1264, 1951
LweI	GCATC	8 cut(s)	70, 304, 716, 982, 1336, 1438, 1585, 2593
MaeI	CTAG	4 cut(s)	417, 741, 837, 996
MaeII	ACGT	2 cut(s)	229, 343
MaeIII	GTNAC	4 cut(s)	71, 195, 230, 2277
MbiI	CCGCTC	1 cut(s)	244
MflI	RGATCY	5 cut(s)	812, 1483, 1753, 2095, 2626
MhlI	GDGCHC	3 cut(s)	168, 1788, 1899
MlsI	TGGCCA	1 cut(s)	1985
MluNI	TGGCCA	1 cut(s)	1985
MlyI	GAGTC	1 cut(s)	95
MmeI	TCCRAC	3 cut(s)	300, 650, 2123
Mox20I	TGGCCA	1 cut(s)	1985
Mph1103I	ATGCAT	1 cut(s)	1453
MroXI	GAANNNNTTC	1 cut(s)	853
MscI	TGGCCA	1 cut(s)	1985
Msp20I	TGGCCA	1 cut(s)	1985
MspA1I	CMGCKG	3 cut(s)	1088, 2132, 2342
MspI	CCGG	3 cut(s)	1061, 2326, 2587
MspR9I	CCNGG	7 cut(s)	292, 1095, 1244, 1281, 1982, 2104, 2587
Mva1269I	GAATGC	3 cut(s)	589, 1393, 1451
MvaI	CCWGG	6 cut(s)	292, 1095, 1244, 1281, 1982, 2104
MvnI	CGCG	8 cut(s)	33, 138, 150, 189, 201, 219, 300, 312
MwoI	GCNNNNNNNGC	9 cut(s)	207, 216, 1136, 1661, 1670, 1685, 1792, 1894, 2612
NciI	CCSGG	1 cut(s)	2587
NheI	GCTAGC	1 cut(s)	995
NlaIII	CATG	5 cut(s)	821, 830, 1058, 2564, 2572
NlaIV	GGNNCC	9 cut(s)	278, 553, 696, 976, 1065, 1248, 1329, 1485, 1755
NmeAIII	GCCGAG	3 cut(s)	231, 305, 2215
NmuCI	GTSAC	4 cut(s)	71, 195, 230, 2277
NruI	TCGCGA	2 cut(s)	189, 300
NsiI	ATGCAT	1 cut(s)	1453
NspI	RCATGY	1 cut(s)	1058
PaeI	GCATGC	1 cut(s)	1058
PagI	TCATGA	2 cut(s)	817, 2560
PceI	AGGCCT	1 cut(s)	2022
PctI	GAATGC	3 cut(s)	589, 1393, 1451
PdmI	GAANNNNTTC	1 cut(s)	853
PfeI	GAWTC	6 cut(s)	140, 877, 955, 1109, 1490, 2119
PflMI	CCANNNNNTGG	1 cut(s)	1006
PfoI	TCCNGGA	1 cut(s)	1279
Ple19I	CGATCG	1 cut(s)	131
PleI	GAGTC	1 cut(s)	95
PmaCI	CACGTG	1 cut(s)	230
PmlI	CACGTG	1 cut(s)	230
PpsI	GAGTC	1 cut(s)	95
Ppu21I	YACGTR	1 cut(s)	230
PpuMI	RGGWCCY	1 cut(s)	1246
PshAI	GACNNNNGTC	1 cut(s)	2249
PshBI	ATTAAT	2 cut(s)	1524, 1698
PsiI	TTATAA	2 cut(s)	1268, 1809
Psp5II	RGGWCCY	1 cut(s)	1246
Psp6I	CCWGG	6 cut(s)	290, 1093, 1242, 1279, 1980, 2102
PspCI	CACGTG	1 cut(s)	230
PspFI	CCCAGC	1 cut(s)	863
PspGI	CCWGG	6 cut(s)	290, 1093, 1242, 1279, 1980, 2102
PspN4I	GGNNCC	9 cut(s)	278, 553, 696, 976, 1065, 1248, 1329, 1485, 1755
PspPI	GGNCC	7 cut(s)	133, 246, 288, 1063, 1246, 1327, 2290
PspPPI	RGGWCCY	1 cut(s)	1246
PstNI	CAGNNNCTG	2 cut(s)	1169, 2135
PsuI	RGATCY	5 cut(s)	812, 1483, 1753, 2095, 2626
PvuI	CGATCG	1 cut(s)	131
PvuII	CAGCTG	3 cut(s)	1088, 2132, 2342
RruI	TCGCGA	2 cut(s)	189, 300
RsaI	GTAC	4 cut(s)	841, 1084, 1804, 1969
RsaNI	GTAC	4 cut(s)	840, 1083, 1803, 1968
Rsr2I	CGGWCCG	1 cut(s)	133
RsrII	CGGWCCG	1 cut(s)	133
Sau96I	GGNCC	7 cut(s)	133, 246, 288, 1063, 1246, 1327, 2290
SchI	GAGTC	1 cut(s)	95
ScrFI	CCNGG	7 cut(s)	292, 1095, 1244, 1281, 1982, 2104, 2587
SduI	GDGCHC	3 cut(s)	168, 1788, 1899
SfaNI	GCATC	8 cut(s)	70, 304, 716, 982, 1336, 1438, 1585, 2593
SinI	GGWCC	4 cut(s)	133, 246, 288, 1246
SphI	GCATGC	1 cut(s)	1058
SseBI	AGGCCT	1 cut(s)	2022
SsiI	CCGC	8 cut(s)	31, 136, 217, 244, 549, 1240, 1922, 2293
SspI	AATATT	2 cut(s)	1429, 2167
SspMI	CTAG	4 cut(s)	417, 741, 837, 996
StuI	AGGCCT	1 cut(s)	2022
StyD4I	CCNGG	7 cut(s)	290, 1093, 1242, 1279, 1980, 2102, 2585
StyI	CCWWGG	2 cut(s)	759, 1351
TaaI	ACNGT	4 cut(s)	515, 1668, 2277, 2538
TaiI	ACGT	2 cut(s)	232, 346
TaqI	TCGA	7 cut(s)	17, 40, 127, 517, 770, 1893, 2028
TatI	WGTACW	1 cut(s)	839
TfiI	GAWTC	6 cut(s)	140, 877, 955, 1109, 1490, 2119
TscAI	CASTG	3 cut(s)	1045, 1909, 1938
TseFI	GTSAC	4 cut(s)	71, 195, 230, 2277
Tsp45I	GTSAC	4 cut(s)	71, 195, 230, 2277
TspGWI	ACGGA	2 cut(s)	1868, 1955
TspRI	CASTG	3 cut(s)	1045, 1909, 1938
Van91I	CCANNNNNTGG	1 cut(s)	1006
VpaK11BI	GGWCC	4 cut(s)	133, 246, 288, 1246
VspI	ATTAAT	2 cut(s)	1524, 1698
XapI	RAATTY	5 cut(s)	1378, 1458, 1558, 1622, 1705
XceI	RCATGY	1 cut(s)	1058
XmiI	GTMKAC	1 cut(s)	1145
XmnI	GAANNNNTTC	1 cut(s)	853
XspI	CTAG	4 cut(s)	417, 741, 837, 996
Zsp2I	ATGCAT	1 cut(s)	1453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.