Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000763

Physical Location & Seq

Genomic Coordinates Forward (+)

20525654 .. 20530468

Gene Structure 4815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G55020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGTTCGGAGAACTTAGGGATCTGCTCACCGGCGGCGGAAATGAGACGACGACGAAGAAGGTGAAAGGAACGGTGGTTCTGATGAAGAAGAACGTCCTCGATTTCAACGATTTCAATGCTTCGTTTCTCGATCGTCTTCATGAATTTCTCGGAAACAAAATCACTCTTCGTCTTGTAAGCTCTGATGTTACTGATTCAGAAAACGGTTCTAAAGGCAAACTAGGGAAGGCTGCTCACTTGGAGGATTGGATCACAACAATCACGTCGTTAACCGCAGGCGAATCCGCTTTCAAGGTCACGTTCGATTACGAAACCGATTTCGGTTACCCTGGAGCATTCTTGATCAGAAACAGCCATTTCAGTGAGTTTCTTCTCAAAAGTCTCACACTTGAAGACGTTCCAGGCCATGGCAGAGTCCATTACATCTGTAATTCTTGGATTTACCCTGCTAAACACTACACTACAGACCGAGTCTTCTTCTCCAACAAGACTTATCTTCCACATGAAACACCAGCGACGCTGCTCAAGTATAGAGAAGAAGAGCTAGTGAGTTTGAGAGGAACCGGCGAAGGAGAGCTTAAGGAATGGGACAGAGTATATGACTATGCTTACTACAATGATTTAGGCGTCCCACCAAAGAACCCACGGCCTGTACTTGGAGGGACACAGGAGTATCCTTACCCAAGAAGAGGAAGAACCGGGCGGAAACCAACTAAAGAAGATCCTCAAACCGAGAGCAGGCTACCGATCACATCGAGCCTAGACATATATGTTCCACGAGATGAGAGATTTGGACACTTGAAGATGTCTGATTTCCTTGCTTATGCTCTAAAAGCGATTGCTCAGTTCATCCAACCTGCACTTGAGGCTGTATTCGACGATACTCCTAAAGAGTTTGATTCTTTTGAAGATGTTCTTAAGATCTATGAAGAAGGAATCGATCTACCAAACCAAGCTTTGATTGATAGTATCGTTAAGAATATACCGCTTGAGATGTTAAAGGAGATATTCAGAACAGATGGCCAGAAATTCCTTAAGTTTCCAGTGCCTCAGGTCATCAAAGAGGACAAAACTGCATGGAGAACAGATGAGGAATTTGCTAGAGAAATGTTGGCTGGACTAAACCCTGTTGTTATTCAACTTCTTAAGGAGTTTCCTCCAAAGAGTAAGCTTGACAGTGAATCATACGGTAACCAGAACAGTACAATCACTAAAAGCCACATAGAACACAATTTGGATGGACTCACTGTTGAAGAGGCTCTGGAGAAGGAGAGGTTGTTTATATTAGACCACCATGACACACTGATGCCATACTTGGGACGCGTAAACACCACCACGACCAAGACTTATGCAAGCAGGACACTTCTGTTCTTGAAAGATGATGGGACCTTGAAGCCGTTGGTGATAGAGCTGAGCTTGCCTCATCCTAATGGAGACAAATTTGGAGCAGTGAGTGAAGTATATACGCCTGGTGAAGGTGTCTACGACTCGCTATGGCAGTTGGCTAAGGCTTTTGTCGGTGTAAATGACTCCGGAAATCATCAGCTTATTAGCCACTGGATGCAAACACACGCATCGATTGAACCGTTTGTGATTGCCACAAACAGACAGCTGAGTGTTCTTCACCCGGTCTTTAAGCTCCTTGAACCTCACTTCCGTGATACGATGAATATCAATGCACTTGCTAGGCAAATCTTGATCAATGGTGGTGGTATATTTGAAATCACTGTGTTTCCTTCTAAATACGCCATGGAGATGTCATCTTTCATTTACAAAAACCACTGGACCTTCCCTGACCAAGCATTACCAGCAGAACTTAAAAAGAGAGGGATGGCCGTTGAGGATCCAGAAGCACCACACGGATTACGTCTGAGGATAAAAGACTATCCTTACGCAGTGGATGGGCTTGAGGTTTGGTATGCTATTGAATCATGGGTCCGAGACTACATTTTCTTGTTCTACAAGATAGAGGAGGATATCCAAACCGACACAGAGCTCCAAGCCTGGTGGAAGGAGGTGCGCGAGGAAGGTCATGGAGACAAAAAGTCAGAACCATGGTGGCCTAAAATGCAAACCCGTGAAGAACTTGTTGAGTCTTGCACCATCATTATTTGGGTGGCTTCTGCTCTTCATGCAGCTGTTAACTTCGGACAGTATCCAGTTGCTGGGTACCTCCCAAACAGACCGACTATAAGCCGTCAGTACATGCCAAAGGAAAACACTCCAGAGTTTGAAGAACTTGAGAAGAATCCTGATAAAGTGTTTTTGAAGACCATCACAGCTCAGCTTCAGACACTTCTAGGGATATCTCTGATTGAGATTCTCTCTACTCATTCTAGCGACGAGGTCTATTTGGGACAGAGAGATTCTAAAGAATGGGCGGCTGAGAAAGAAGCGTTGGAGGCGTTCGAGAAGTTTGGAGAGAAAGTAAAGGAGATTGAGAAGAACATTGATGAGAGGAACGACGACGAGACTCTCAAGAACAGGACTGGTTTGGTTAAGATGCCATACACTTTATTGTTTCCGAGCAGTGAAGGCGGAGTCACCGGCAGGGGAATTCCAAATAGCGTCTCTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009536 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009791 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0032501 GO:0032502 GO:0033993 GO:0034440 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055114 GO:0071704 GO:0090696 GO:0090697 GO:0090698 GO:0097305 GO:0099402 GO:1901700 GO:1905392 GO:1905393 GO:1990136

KEGG Pathways

Metabolic & Signaling

ko00591 map00591

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

859

Amino Acids

98.04

Weight (kDa)

5.34

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	57 - 160	2.7e-19	PLAT/LH2 domain
Lipoxygenase	PF00305	174 - 842	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55020
fragaria_vesca	FvH4_4g09530 FvH4_6g06090 FvH4_6g06090 FvH4_6g06090 FvH4_6g06100
malus_domestica	MD04G1204000.v1.1 MD04G1204100.v1.1 MD04G1204200.v1.1 MD04G1204500.v1.1 MD04G1204600.v1.1 MD09G1069500.v1.1 MD12G1218000.v1.1 MD12G1218200.v1.1 MD12G1218300.v1.1
prunus_persica	Prupe.6G324100_v2.0.a1 Prupe.6G324100_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324300_v2.0.a1 Prupe.6G324400_v2.0.a1 Prupe.6G324600_v2.0.a1 Prupe.6G324600_v2.0.a1
pyrus_communis	pycom04g18050 pycom04g18060 pycom12433g00060 pycom12g20350 pycom12g20380 pycom12g20390
rosa_chinensis	RchiOBHm_Chr3g0455091 RchiOBHm_Chr3g0455111 RchiOBHm_Chr3g0455121 RchiOBHm_Chr4g0404751
rosa_laevigata	RLG00000008903 RLG00000010665 RLG00000025386 RLG00000025387 RLG00000025389
rosa_multiflora	Rmu_co8490177.1_g000001 Rmu_sc0001179.1_g000031 Rmu_sc0002169.1_g000019 Rmu_sc0002169.1_g000023 Rmu_sc0002169.1_g000024 Rmu_sc0002502.1_g000004
rosa_roxburghii	Rroxscaffold_5G00348930 Rroxscaffold_6G00424550 Rroxscaffold_6G00424560 Rroxscaffold_6G00424570 Rroxscaffold_7G00160420 Rroxscaffold_7G00160500
rosa_rugosa	Rorug03G0004000 Rorug03G0004000 Rorug04G0049200
rosa_samantha	Rh3AG064600 Rh3AG064700 Rh3AG064800 Rh3BG066700 Rh3CG065100 Rh3CG065200 Rh3DG066300 Rh3DG066600 Rh3DG066700 Rh4AG124900 Rh4CG133100 Rh4DG118900
rosa_wichuraiana	Rw3G005050 Rw3G005060 Rw3G005070 Rw4G010130 Rw6G041270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	865
Acc65I	GGTACC	1 cut(s)	2169
AccB1I	GGYRCC	1 cut(s)	2169
AccB7I	CCANNNNNTGG	2 cut(s)	407, 2165
AccI	GTMKAC	1 cut(s)	1482
AccII	CGCG	2 cut(s)	1323, 2022
AccIII	TCCGGA	1 cut(s)	1532
AciI	CCGC	8 cut(s)	33, 36, 273, 285, 703, 986, 2381, 2538
AclWI	GGATC	5 cut(s)	27, 257, 716, 1838, 1851
AcoI	YGGCCR	2 cut(s)	1021, 1833
AcsI	RAATTY	5 cut(s)	143, 1028, 1094, 1439, 2556
AcuI	CTGAAG	1 cut(s)	2273
AcyI	GRCGYC	1 cut(s)	627
AfaI	GTAC	4 cut(s)	654, 1204, 2171, 2204
AfiI	CCNNNNNNNGG	7 cut(s)	407, 656, 689, 738, 1316, 1475, 2165
AflII	CTTAAG	4 cut(s)	578, 917, 1034, 1145
AflIII	ACRYGT	1 cut(s)	1321
AhdI	GACNNNNNGTC	1 cut(s)	2044
AjiI	CACGTC	1 cut(s)	264
AjnI	CCWGG	4 cut(s)	328, 400, 1468, 2003
AjuI	GAANNNNNNNTTGG	2 cut(s)	2381, 2413
AleI	CACNNNNGTG	1 cut(s)	1656
AloI	GAACNNNNNNTCC	4 cut(s)	60, 92, 1638, 1670
Alw21I	GWGCWC	1 cut(s)	1998
Alw26I	GTCTC	7 cut(s)	38, 386, 1428, 1935, 2031, 2465, 2575
AlwI	GGATC	5 cut(s)	27, 257, 716, 1838, 1851
AlwNI	CAGNNNCTG	1 cut(s)	2165
Aor13HI	TCCGGA	1 cut(s)	1532
AoxI	GGCC	5 cut(s)	403, 647, 1021, 1833, 2060
ApeKI	GCWGC	3 cut(s)	230, 520, 2135
ApoI	RAATTY	5 cut(s)	143, 1028, 1094, 1439, 2556
Asp700I	GAANNNNTTC	2 cut(s)	396, 912
Asp718I	GGTACC	1 cut(s)	2169
AspLEI	GCGC	1 cut(s)	2022
AspS9I	GGNCC	3 cut(s)	1386, 1785, 1936
AsuC2I	CCSGG	2 cut(s)	700, 1628
AsuHPI	GGTGA	6 cut(s)	19, 73, 1414, 1484, 1616, 2536
AvaII	GGWCC	3 cut(s)	1386, 1785, 1936
AxyI	CCTNAGG	1 cut(s)	1050
BaeI	ACNNNNGTAYC	2 cut(s)	656, 689
BalI	TGGCCA	1 cut(s)	1023
BamHI	GGATCC	1 cut(s)	1843
BanI	GGYRCC	1 cut(s)	2169
BanII	GRGCYC	1 cut(s)	1998
BauI	CACGAG	1 cut(s)	777
BbsI	GAAGAC	4 cut(s)	128, 399, 466, 2276
Bbv12I	GWGCWC	1 cut(s)	1998
BbvI	GCAGC	3 cut(s)	217, 507, 2147
BccI	CCATC	7 cut(s)	1013, 1232, 1376, 1825, 1895, 2111, 2282
BceAI	ACGGC	4 cut(s)	662, 1381, 1820, 2181
BcgI	CGANNNNNNTGC	2 cut(s)	98, 132
BciT130I	CCWGG	4 cut(s)	330, 402, 1470, 2005
BciVI	GTATCC	2 cut(s)	684, 2166
BclI	TGATCA	2 cut(s)	342, 1698
BcnI	CCSGG	2 cut(s)	700, 1628
BcoDI	GTCTC	7 cut(s)	38, 386, 1428, 1935, 2031, 2465, 2575
BfaI	CTAG	7 cut(s)	221, 545, 761, 1101, 1686, 2300, 2337
BfmI	CTRYAG	1 cut(s)	462
BfrI	CTTAAG	4 cut(s)	578, 917, 1034, 1145
BfuAI	ACCTGC	1 cut(s)	865
BfuI	GTATCC	2 cut(s)	684, 2166
BglII	AGATCT	1 cut(s)	921
BisI	GCNGC	5 cut(s)	34, 231, 521, 2136, 2382
BlpI	GCTNAGC	2 cut(s)	1412, 2283
BlsI	GCNGC	5 cut(s)	35, 232, 522, 2137, 2383
Bme1390I	CCNGG	6 cut(s)	330, 402, 700, 1470, 1628, 2005
Bme18I	GGWCC	3 cut(s)	1386, 1785, 1936
BmeRI	GACNNNNNGTC	1 cut(s)	2044
BmgBI	CACGTC	1 cut(s)	264
BmgT120I	GGNCC	3 cut(s)	1386, 1785, 1936
BmiI	GGNNCC	5 cut(s)	562, 1387, 1845, 1937, 2171
BmrFI	CCNGG	6 cut(s)	330, 402, 700, 1470, 1628, 2005
BmsI	GCATC	4 cut(s)	1296, 1551, 1583, 2493
BpiI	GAAGAC	4 cut(s)	128, 399, 466, 2276
BplI	GAGNNNNNCTC	4 cut(s)	1405, 1437, 2309, 2341
BpmI	CTGGAG	3 cut(s)	351, 1283, 2208
Bpu10I	CCTNAGC	1 cut(s)	1506
Bpu1102I	GCTNAGC	2 cut(s)	1412, 2283
BpuEI	CTTGAG	6 cut(s)	509, 884, 1010, 1928, 2261, 2462
BpuMI	CCSGG	2 cut(s)	700, 1628
Bsa29I	ATCGAT	2 cut(s)	939, 1577
BsaBI	GATNNNNATC	1 cut(s)	1670
BsaHI	GRCGYC	1 cut(s)	627
BsaJI	CCNNGG	5 cut(s)	328, 406, 644, 1749, 2054
BsaWI	WCCGGW	1 cut(s)	1532
BsaXI	ACNNNNNCTCC	4 cut(s)	1262, 1292, 2412, 2442
Bsc4I	CCNNNNNNNGG	7 cut(s)	407, 656, 689, 738, 1316, 1475, 2165
Bse118I	RCCGGY	3 cut(s)	29, 563, 2546
Bse1I	ACTGG	5 cut(s)	1043, 1562, 1787, 2159, 2494
Bse21I	CCTNAGG	1 cut(s)	1050
Bse8I	GATNNNNATC	1 cut(s)	1670
BseAI	TCCGGA	1 cut(s)	1532
BseBI	CCWGG	4 cut(s)	330, 402, 1470, 2005
BseCI	ATCGAT	2 cut(s)	939, 1577
BseDI	CCNNGG	5 cut(s)	328, 406, 644, 1749, 2054
BseGI	GGATG	6 cut(s)	849, 1243, 1423, 1566, 1836, 1906
BseJI	GATNNNNATC	1 cut(s)	1670
BseLI	CCNNNNNNNGG	7 cut(s)	407, 656, 689, 738, 1316, 1475, 2165
BseMII	CTCAG	7 cut(s)	857, 1064, 1403, 1604, 1862, 2297, 2376
BseNI	ACTGG	5 cut(s)	1043, 1562, 1787, 2159, 2494
BseRI	GAGGAG	1 cut(s)	1985
BseXI	GCAGC	3 cut(s)	217, 507, 2147
BseYI	CCCAGC	1 cut(s)	2165
BsgI	GTGCAG	1 cut(s)	843
Bsh1236I	CGCG	2 cut(s)	1323, 2022
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	5 cut(s)	405, 649, 1023, 1835, 2062
BshNI	GGYRCC	1 cut(s)	2169
BshVI	ATCGAT	2 cut(s)	939, 1577
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	1 cut(s)	1998
BsiSI	CCGG	6 cut(s)	30, 564, 699, 1533, 1628, 2547
BslFI	GGGAC	6 cut(s)	602, 614, 676, 1332, 1399, 2370
BslI	CCNNNNNNNGG	7 cut(s)	407, 656, 689, 738, 1316, 1475, 2165
BsmAI	GTCTC	7 cut(s)	38, 386, 1428, 1935, 2031, 2465, 2575
BsmBI	CGTCTC	2 cut(s)	38, 2575
BsmFI	GGGAC	6 cut(s)	602, 614, 676, 1332, 1399, 2370
BsmI	GAATGC	1 cut(s)	335
BsnI	GGCC	5 cut(s)	405, 649, 1023, 1835, 2062
Bsp1286I	GDGCHC	1 cut(s)	1998
Bsp13I	TCCGGA	1 cut(s)	1532
Bsp1720I	GCTNAGC	2 cut(s)	1412, 2283
Bsp19I	CCATGG	3 cut(s)	406, 1749, 2054
BspACI	CCGC	8 cut(s)	33, 36, 273, 285, 703, 986, 2381, 2538
BspANI	GGCC	5 cut(s)	405, 649, 1023, 1835, 2062
BspCNI	CTCAG	7 cut(s)	856, 1063, 1404, 1605, 1863, 2296, 2377
BspDI	ATCGAT	2 cut(s)	939, 1577
BspEI	TCCGGA	1 cut(s)	1532
BspFNI	CGCG	2 cut(s)	1323, 2022
BspHI	TCATGA	1 cut(s)	139
BspLI	GGNNCC	5 cut(s)	562, 1387, 1845, 1937, 2171
BspMI	ACCTGC	1 cut(s)	865
BspPI	GGATC	5 cut(s)	27, 257, 716, 1838, 1851
BspQI	GCTCTTC	2 cut(s)	534, 2133
BspT107I	GGYRCC	1 cut(s)	2169
BspTI	CTTAAG	4 cut(s)	578, 917, 1034, 1145
BsrFI	RCCGGY	3 cut(s)	29, 563, 2546
BsrI	ACTGG	5 cut(s)	1043, 1562, 1787, 2159, 2494
BssAI	RCCGGY	3 cut(s)	29, 563, 2546
BssECI	CCNNGG	5 cut(s)	328, 406, 644, 1749, 2054
BssNI	GRCGYC	1 cut(s)	627
BssSI	CACGAG	1 cut(s)	777
BssT1I	CCWWGG	3 cut(s)	406, 1749, 2054
Bst2BI	CACGAG	1 cut(s)	777
Bst2UI	CCWGG	4 cut(s)	330, 402, 1470, 2005
Bst4CI	ACNGT	9 cut(s)	73, 206, 1178, 1190, 1202, 1249, 1587, 1729, 2154
Bst6I	CTCTTC	5 cut(s)	171, 534, 682, 1248, 2133
BstACI	GRCGYC	1 cut(s)	627
BstAFI	CTTAAG	4 cut(s)	578, 917, 1034, 1145
BstC8I	GCNNGC	4 cut(s)	277, 740, 1354, 1418
BstDEI	CTNAG	9 cut(s)	14, 843, 1050, 1412, 1506, 1613, 1871, 2283, 2385
BstDSI	CCRYGG	4 cut(s)	406, 644, 1749, 2054
BstEII	GGTNACC	2 cut(s)	323, 1190
BstENI	CCTNNNNNAGG	1 cut(s)	1473
BstF5I	GGATG	6 cut(s)	849, 1243, 1423, 1566, 1836, 1906
BstFNI	CGCG	2 cut(s)	1323, 2022
BstHHI	GCGC	1 cut(s)	2022
BstMAI	GTCTC	7 cut(s)	38, 386, 1428, 1935, 2031, 2465, 2575
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	8 cut(s)	833, 866, 1417, 1808, 2068, 2132, 2402, 2535
BstNI	CCWGG	4 cut(s)	330, 402, 1470, 2005
BstNSI	RCATGY	1 cut(s)	2209
BstPI	GGTNACC	2 cut(s)	323, 1190
BstSCI	CCNGG	6 cut(s)	328, 400, 698, 1468, 1626, 2003
BstSFI	CTRYAG	1 cut(s)	462
BstUI	CGCG	2 cut(s)	1323, 2022
BstV1I	GCAGC	3 cut(s)	217, 507, 2147
BstV2I	GAAGAC	4 cut(s)	128, 399, 466, 2276
BstX2I	RGATCY	4 cut(s)	19, 721, 921, 1843
BstYI	RGATCY	4 cut(s)	19, 721, 921, 1843
Bsu15I	ATCGAT	2 cut(s)	939, 1577
Bsu36I	CCTNAGG	1 cut(s)	1050
BsuI	GTATCC	2 cut(s)	684, 2166
BsuRI	GGCC	5 cut(s)	405, 649, 1023, 1835, 2062
BsuTUI	ATCGAT	2 cut(s)	939, 1577
BtgI	CCRYGG	4 cut(s)	406, 644, 1749, 2054
BtrI	CACGTC	1 cut(s)	264
BtsCI	GGATG	6 cut(s)	849, 1243, 1423, 1566, 1836, 1906
BtsI	GCAGTG	3 cut(s)	1455, 1902, 2536
BveI	ACCTGC	1 cut(s)	865
Cac8I	GCNNGC	4 cut(s)	277, 740, 1354, 1418
CaiI	CAGNNNCTG	1 cut(s)	2165
CciI	TCATGA	1 cut(s)	139
CfoI	GCGC	1 cut(s)	2022
Cfr10I	RCCGGY	3 cut(s)	29, 563, 2546
Cfr13I	GGNCC	3 cut(s)	1386, 1785, 1936
ClaI	ATCGAT	2 cut(s)	939, 1577
CseI	GACGC	4 cut(s)	526, 616, 1329, 2557
Csp6I	GTAC	4 cut(s)	653, 1203, 2170, 2203
CspCI	CAANNNNNGTGG	4 cut(s)	1690, 1725, 1988, 2023
CviQI	GTAC	4 cut(s)	653, 1203, 2170, 2203
DdeI	CTNAG	9 cut(s)	14, 843, 1050, 1412, 1506, 1613, 1871, 2283, 2385
DriI	GACNNNNNGTC	1 cut(s)	2044
EaeI	YGGCCR	2 cut(s)	1021, 1833
Eam1104I	CTCTTC	5 cut(s)	171, 534, 682, 1248, 2133
Eam1105I	GACNNNNNGTC	1 cut(s)	2044
EarI	CTCTTC	5 cut(s)	171, 534, 682, 1248, 2133
EciI	GGCGGA	3 cut(s)	51, 718, 2553
Ecl136II	GAGCTC	1 cut(s)	1996
Eco130I	CCWWGG	3 cut(s)	406, 1749, 2054
Eco24I	GRGCYC	1 cut(s)	1998
Eco32I	GATATC	2 cut(s)	1978, 2307
Eco47I	GGWCC	3 cut(s)	1386, 1785, 1936
Eco53kI	GAGCTC	1 cut(s)	1996
Eco57I	CTGAAG	1 cut(s)	2273
Eco81I	CCTNAGG	1 cut(s)	1050
Eco91I	GGTNACC	2 cut(s)	323, 1190
EcoICRI	GAGCTC	1 cut(s)	1996
EcoNI	CCTNNNNNAGG	1 cut(s)	1473
EcoO109I	RGGNCCY	1 cut(s)	1386
EcoO65I	GGTNACC	2 cut(s)	323, 1190
EcoRI	GAATTC	1 cut(s)	2556
EcoRII	CCWGG	4 cut(s)	328, 400, 1468, 2003
EcoRV	GATATC	2 cut(s)	1978, 2307
EcoT14I	CCWWGG	3 cut(s)	406, 1749, 2054
EcoT38I	GRGCYC	1 cut(s)	1998
ErhI	CCWWGG	3 cut(s)	406, 1749, 2054
Esp3I	CGTCTC	2 cut(s)	38, 2575
FalI	AAGNNNNNCTT	4 cut(s)	561, 593, 900, 932
FaqI	GGGAC	6 cut(s)	602, 614, 676, 1332, 1399, 2370
FbaI	TGATCA	2 cut(s)	342, 1698
FblI	GTMKAC	1 cut(s)	1482
Fnu4HI	GCNGC	5 cut(s)	34, 231, 521, 2136, 2382
FokI	GGATG	6 cut(s)	836, 1250, 1410, 1573, 1843, 1913
FriOI	GRGCYC	1 cut(s)	1998
Fsp4HI	GCNGC	5 cut(s)	34, 231, 521, 2136, 2382
FspBI	CTAG	7 cut(s)	221, 545, 761, 1101, 1686, 2300, 2337
GlaI	GCGC	1 cut(s)	2021
GluI	GCNGC	5 cut(s)	34, 231, 521, 2136, 2382
GsaI	CCCAGC	1 cut(s)	2169
GsuI	CTGGAG	3 cut(s)	351, 1283, 2208
HaeIII	GGCC	5 cut(s)	405, 649, 1023, 1835, 2062
HapII	CCGG	6 cut(s)	30, 564, 699, 1533, 1628, 2547
HgaI	GACGC	4 cut(s)	526, 616, 1329, 2557
HhaI	GCGC	1 cut(s)	2022
Hin1I	GRCGYC	1 cut(s)	627
Hin6I	GCGC	1 cut(s)	2020
HinP1I	GCGC	1 cut(s)	2020
HincII	GTYRAC	2 cut(s)	270, 2143
HindII	GTYRAC	2 cut(s)	270, 2143
HindIII	AAGCTT	2 cut(s)	954, 1169
HpaI	GTTAAC	2 cut(s)	270, 2143
HpaII	CCGG	6 cut(s)	30, 564, 699, 1533, 1628, 2547
HphI	GGTGA	6 cut(s)	19, 73, 1414, 1484, 1616, 2536
Hpy166II	GTNNAC	4 cut(s)	270, 1327, 1483, 2143
Hpy8I	GTNNAC	4 cut(s)	270, 1327, 1483, 2143
Hpy99I	CGWCG	8 cut(s)	52, 55, 268, 520, 881, 2345, 2468, 2471
HpyCH4III	ACNGT	9 cut(s)	73, 206, 1178, 1190, 1202, 1249, 1587, 1729, 2154
HpyCH4IV	ACGT	5 cut(s)	93, 263, 299, 396, 1867
HpyCH4V	TGCA	8 cut(s)	860, 1076, 1352, 1564, 1679, 2071, 2100, 2135
HpyF10VI	GCNNNNNNNGC	8 cut(s)	833, 866, 1417, 1808, 2068, 2132, 2402, 2535
HpyF3I	CTNAG	9 cut(s)	14, 843, 1050, 1412, 1506, 1613, 1871, 2283, 2385
HpySE526I	ACGT	5 cut(s)	93, 263, 299, 396, 1867
Hsp92I	GRCGYC	1 cut(s)	627
HspAI	GCGC	1 cut(s)	2020
Kpn2I	TCCGGA	1 cut(s)	1532
KpnI	GGTACC	1 cut(s)	2173
Ksp22I	TGATCA	2 cut(s)	342, 1698
KspAI	GTTAAC	2 cut(s)	270, 2143
LguI	GCTCTTC	2 cut(s)	534, 2133
LmnI	GCTCC	4 cut(s)	332, 1445, 1644, 2001
Lsp1109I	GCAGC	3 cut(s)	217, 507, 2147
LweI	GCATC	4 cut(s)	1296, 1551, 1583, 2493
MaeI	CTAG	7 cut(s)	221, 545, 761, 1101, 1686, 2300, 2337
MaeII	ACGT	5 cut(s)	93, 263, 299, 396, 1867
MaeIII	GTNAC	5 cut(s)	187, 295, 323, 1190, 2542
MflI	RGATCY	4 cut(s)	19, 721, 921, 1843
MhlI	GDGCHC	1 cut(s)	1998
MlsI	TGGCCA	1 cut(s)	1023
MluCI	AATT	7 cut(s)	143, 430, 1028, 1094, 1231, 1439, 2556
MluI	ACGCGT	1 cut(s)	1321
MluNI	TGGCCA	1 cut(s)	1023
MlyI	GAGTC	8 cut(s)	423, 480, 1236, 1481, 1523, 2102, 2467, 2550
MmeI	TCCRAC	3 cut(s)	507, 877, 2379
Mox20I	TGGCCA	1 cut(s)	1023
MroI	TCCGGA	1 cut(s)	1532
MroXI	GAANNNNTTC	2 cut(s)	396, 912
MscI	TGGCCA	1 cut(s)	1023
MslI	CAYNNNNRTG	5 cut(s)	360, 1304, 1428, 1656, 1754
Msp20I	TGGCCA	1 cut(s)	1023
MspA1I	CMGCKG	2 cut(s)	1612, 2138
MspCI	CTTAAG	4 cut(s)	578, 917, 1034, 1145
MspI	CCGG	6 cut(s)	30, 564, 699, 1533, 1628, 2547
MspR9I	CCNGG	6 cut(s)	330, 402, 700, 1470, 1628, 2005
Mva1269I	GAATGC	1 cut(s)	335
MvaI	CCWGG	4 cut(s)	330, 402, 1470, 2005
MvnI	CGCG	2 cut(s)	1323, 2022
MwoI	GCNNNNNNNGC	8 cut(s)	833, 866, 1417, 1808, 2068, 2132, 2402, 2535
NciI	CCSGG	2 cut(s)	700, 1628
NcoI	CCATGG	3 cut(s)	406, 1749, 2054
NlaIV	GGNNCC	5 cut(s)	562, 1387, 1845, 1937, 2171
NmuCI	GTSAC	2 cut(s)	295, 2542
NspI	RCATGY	1 cut(s)	2209
OliI	CACNNNNGTG	1 cut(s)	1656
PagI	TCATGA	1 cut(s)	139
PciSI	GCTCTTC	2 cut(s)	534, 2133
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 1583
PctI	GAATGC	1 cut(s)	335
PdmI	GAANNNNTTC	2 cut(s)	396, 912
PfeI	GAWTC	9 cut(s)	194, 281, 899, 936, 1181, 1928, 2248, 2320, 2366
PflFI	GACNNNGTC	2 cut(s)	470, 2345
PflMI	CCANNNNNTGG	2 cut(s)	407, 2165
PkrI	GCNGC	5 cut(s)	35, 232, 522, 2137, 2383
Ple19I	CGATCG	1 cut(s)	133
PleI	GAGTC	8 cut(s)	422, 479, 1236, 1481, 1523, 2101, 2467, 2549
PpsI	GAGTC	8 cut(s)	422, 479, 1236, 1481, 1523, 2101, 2467, 2549
PpuMI	RGGWCCY	1 cut(s)	1386
Psp124BI	GAGCTC	1 cut(s)	1998
Psp5II	RGGWCCY	1 cut(s)	1386
Psp6I	CCWGG	4 cut(s)	328, 400, 1468, 2003
PspEI	GGTNACC	2 cut(s)	323, 1190
PspFI	CCCAGC	1 cut(s)	2165
PspGI	CCWGG	4 cut(s)	328, 400, 1468, 2003
PspN4I	GGNNCC	5 cut(s)	562, 1387, 1845, 1937, 2171
PspPI	GGNCC	3 cut(s)	1386, 1785, 1936
PspPPI	RGGWCCY	1 cut(s)	1386
PstNI	CAGNNNCTG	1 cut(s)	2165
PsuI	RGATCY	4 cut(s)	19, 721, 921, 1843
PsyI	GACNNNGTC	2 cut(s)	470, 2345
PvuI	CGATCG	1 cut(s)	133
PvuII	CAGCTG	2 cut(s)	1612, 2138
RsaI	GTAC	4 cut(s)	654, 1204, 2171, 2204
RsaNI	GTAC	4 cut(s)	653, 1203, 2170, 2203
RseI	CAYNNNNRTG	5 cut(s)	360, 1304, 1428, 1656, 1754
SacI	GAGCTC	1 cut(s)	1998
SapI	GCTCTTC	2 cut(s)	534, 2133
SatI	GCNGC	5 cut(s)	34, 231, 521, 2136, 2382
Sau96I	GGNCC	3 cut(s)	1386, 1785, 1936
SchI	GAGTC	8 cut(s)	423, 480, 1236, 1481, 1523, 2102, 2467, 2550
ScrFI	CCNGG	6 cut(s)	330, 402, 700, 1470, 1628, 2005
SduI	GDGCHC	1 cut(s)	1998
SfaNI	GCATC	4 cut(s)	1296, 1551, 1583, 2493
SfcI	CTRYAG	1 cut(s)	462
SgrAI	CRCCGGYG	1 cut(s)	29
SinI	GGWCC	3 cut(s)	1386, 1785, 1936
SmiMI	CAYNNNNRTG	5 cut(s)	360, 1304, 1428, 1656, 1754
Sse9I	AATT	7 cut(s)	143, 430, 1028, 1094, 1231, 1439, 2556
SsiI	CCGC	8 cut(s)	33, 36, 273, 285, 703, 986, 2381, 2538
SspMI	CTAG	7 cut(s)	221, 545, 761, 1101, 1686, 2300, 2337
SstI	GAGCTC	1 cut(s)	1998
StyD4I	CCNGG	6 cut(s)	328, 400, 698, 1468, 1626, 2003
StyI	CCWWGG	3 cut(s)	406, 1749, 2054
TaaI	ACNGT	9 cut(s)	73, 206, 1178, 1190, 1202, 1249, 1587, 1729, 2154
TaiI	ACGT	5 cut(s)	96, 266, 302, 399, 1870
TaqI	TCGA	8 cut(s)	99, 129, 303, 755, 876, 939, 1577, 2409
TaqII	GACCGA	2 cut(s)	483, 2200
TasI	AATT	7 cut(s)	143, 430, 1028, 1094, 1231, 1439, 2556
TatI	WGTACW	3 cut(s)	652, 1202, 2202
TauI	GCSGC	2 cut(s)	36, 2384
TfiI	GAWTC	9 cut(s)	194, 281, 899, 936, 1181, 1928, 2248, 2320, 2366
TseFI	GTSAC	2 cut(s)	295, 2542
TseI	GCWGC	3 cut(s)	230, 520, 2135
Tsp45I	GTSAC	2 cut(s)	295, 2542
TspDTI	ATGAA	9 cut(s)	98, 128, 156, 519, 838, 942, 1682, 1756, 2120
TspGWI	ACGGA	2 cut(s)	1646, 1875
Tth111I	GACNNNGTC	2 cut(s)	470, 2345
Van91I	CCANNNNNTGG	2 cut(s)	407, 2165
Vha464I	CTTAAG	4 cut(s)	578, 917, 1034, 1145
VpaK11BI	GGWCC	3 cut(s)	1386, 1785, 1936
XagI	CCTNNNNNAGG	1 cut(s)	1473
XapI	RAATTY	5 cut(s)	143, 1028, 1094, 1439, 2556
XceI	RCATGY	1 cut(s)	2209
XmiI	GTMKAC	1 cut(s)	1482
XmnI	GAANNNNTTC	2 cut(s)	396, 912
XspI	CTAG	7 cut(s)	221, 545, 761, 1101, 1686, 2300, 2337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.