Rroxscaffold_6G00424550

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000763
Physical Location & Seq
Reverse (-)
45664253 .. 45668112
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00424550.1

Sequence Viewer

Length: 2778 bp
ATGCTTCATTTCAAGTGTCATCATACTCCTCCTCTCAACTTGATCAGAACCAAACCTCCTCCATCTCCATGTGGAGCTCGCCTAAGCTCAGCTGCTGCAGTTAATGGCAGACCACTAACGCTCTTATTCCGTGCTGCTGGGTCCTTGTTCATGGCCAATGTTAGACGATCTCGGCCGTTGACTGTGTCAGCTGCCAAGTCTTCCCAGAGCACCACCACCATTGATCCTCCAAGTGATGACACGAAGATCAAAGGGACTGTGGTTTTGATGAAGAAGAATCTTCTGGAGCTCAACGACCTCACAGCATCTTTCATCGACCGTGTTCATGAGCTTTTGGGGAAATCTGTTTCTCTCCGGCTCATCAGTGCTGTTAACACCGACCCTGGAAATGGGAATCAAGGAAAAATTGGGAAGCCCGCTTATTTGGAGAATTGGATCACCAAATTTACTCCCTTGACAGCAGAAGAGTGTGCGTTTGAGGTTAATTTTGATTGGGATGAGAAGATTGGAGTTCCAGGAGCTTTCATCATAAGAAATGAACATGGCAGTGAGTTTTACTTGAAATCCCTCACACTCGGAAACGTTCCCGGAGAAGGAAAAGTCCACTTTGATTGCAACTCATGGGTGTACCCTGCTCACAAGTACAAGAAAGACCGCGTTTTCTTCACTAACAAGACGTATCTTTCGAGTGAGACGCCGGTTGGACTAAAGAAGTTTAGAGAAGAAGAGCTAGTCACCTTGAGAGGTGATGATGTCAAAAAGGGAGAGCTTCAGAAATGGGACAGGGTTTATGACTATGCCTATTACAATGATTTGGGGAGTCCAGATAAGGGTGAAAATTATGCCCGCCCAATTCTCGGAGGGTCTACCGAGTTCCCTTATCCTCGAAGAGGAAGAACTGGAAGACCAGCAACCAAGAAAGATCCCAAGAGTGAGAGTCCTCTGCCTTTTATTGAGAGCTTATTTATATATGTTCCAAGAGACGAAAGATTTGGTCACTTAAAGATGTCAGACTTGATTGCATATGCCCTGAAATCCATATCTCAGATACTTAAACCTGATGAGCTAGCTACTCTACTTGGCCATCAAAAAGAGTTTAACAGCTTGGAAGATGTACTTAAACTCTATGAAGGAGGATTAGAGTTGCCAAGCGGATTGTTGAAGTTTGTTAGGAGTACCACCCCTGCTGAGACGGTCAAGGAACTTTTCCGAACTGATGGTGAACGATTACTAAAGTTTCCAGTGCCTCAAGTGATCAAAGAGGATAAGTCGGCATGGAGAACTGATGAGGAGTTTGCAAGAGAAATGTTGGCTGGTCTAAACCCTGTCAGCATATGTCGTCTCCAGGAATTTCCGCCAGCTAGCAAGCTAGACCGAAGTGTATATGGAGATCAAACCAGTAAAATAACCAAAGAACACATAGCAGATAAATTAGATGGACTCAGCATAGATGAGGCGATTAACAAGAACAAGCTATTCATACTAGACCACCATGATTCATTGATGCCTTACCTGGAGCGTATAAACTCAACTGATTTGGTAAAAGGTTATGCAAGCAGGACACTCCTTTTCTTAACAAATGATGGGACTTTGAAGCCAATAGCTATTGAACTGAGCTTGCCGCATCCTGGTGGAGTCGGTTGCACTAGTGAAGTCTACACTCCGTCTAGCCAAGGCGTTGAGAGTCACATTTGGCAGCTCGCGAAAGCTTATGTGGCTATAAACGACTCAGGCTATCATCAGCTCGTCAGCCATTGGTTGAGAACTCATGCAGTTATTGAGCCAGTTATAATAGCAACAAACAGGCAGTTGAGCGTGCTTCACCCGATTCACAAGCTTCTGCATCCTCACTTTCGTGACACTATGAATGTAAACGCAGTAGCGCGACAGATTCTCATTAATGCTGGTGGAGTGCTAGAGAACACAGTCTTTCCTGCAAAGTATTCCATGGAATGGTCATCTGTTATGTACAAGGACAGCTGGGTTTTTCCTGAACAAGCACTCCCCAAGGATCTGATCAAAAGAGGAATGGCAGTTGAGGATTCAAGTGCCTCACACGGTGTGCGGTTACTAATAGAGGACTATCCATATGCTGCTGATGGGCTTGAAATCTGGTCTGCCATCAAAACATGGGTGGAAGAGTATTGCTCCTTCTACTTCAAAACTGATGAAATGGTTCAAAAGGATTCGGAACTCCAGTCCTGGTGGAAGGAACTCCGAGAAGAGGGTCATGGCGACAAGAAAGATGAGCCTTGGTGGCCTAAAATGCAGACTGTTGAAGAGCTGATAGAATCATGCACCATCATCATATGGACTGCTTCAGCTTACCATGCTGCAATCAATTTCGGGCAGTATCCTTATGGAGGATACCCTGCAAACCGCCCCAGCATAAGCCGGCGGTTCATGCCCAAGGAAGGCACTCCTGAGTACGAGAAACTCAAGAATAACCCTGAAAAGGCTTTCTTGGAAACAGTTACACCTCAGCTTCAGACCCTTCTTGGCATGGCCTCCATTGAGATACTGTCAAGGCACTCGGCTGATGAGATTTACTTGGGGCAGAGAGACAGTCAAGAATGGACAACAGACACCAAAGTCTTGCAAGCATTTGAGAATTTCAGAAACAAGCTCAAAGCAGTTGAGGAAAGAGTGACAAAGATGAACAAGGATGACAAGTTGAAGAACCGGACTGGACCGGCCAAGATGCCTTACACTTTGCTCTATCCTACCAGCGAACCTGGACTTACCGGCAAGGGAATTCCCAACAGTGTCTCAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00591 map00591
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

925

Amino Acids

104.45

Weight (kDa)

6.96

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 119 - 222 2e-19 PLAT/LH2 domain
Lipoxygenase PF00305 235 - 908 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1790
AasI GACNNNNNNGTC 1 cut(s) 2591
AccB7I CCANNNNNTGG 1 cut(s) 1953
AccI GTMKAC 2 cut(s) 866, 1656
AccII CGCG 3 cut(s) 657, 1703, 1885
AciI CCGC 9 cut(s) 417, 655, 847, 1152, 1355, 1622, 2065, 2380, 2398
AclI AACGTT 1 cut(s) 582
AclWI GGATC 4 cut(s) 218, 443, 917, 2019
AcoI YGGCCR 4 cut(s) 153, 173, 1081, 2694
AcsI RAATTY 4 cut(s) 443, 1349, 2611, 2754
AcuI CTGAAG 3 cut(s) 755, 2304, 2471
AcyI GRCGYC 1 cut(s) 695
AdeI CACNNNGTG 2 cut(s) 2060, 2062
AfaI GTAC 6 cut(s) 629, 644, 1116, 1177, 1970, 2429
AhlI ACTAGT 1 cut(s) 1646
AjnI CCWGG 7 cut(s) 382, 514, 1344, 1512, 1627, 2201, 2734
AleI CACNNNNGTG 1 cut(s) 1854
AloI GAACNNNNNNTCC 4 cut(s) 40, 72, 1986, 2018
Alw21I GWGCWC 3 cut(s) 79, 212, 291
Alw26I GTCTC 6 cut(s) 686, 975, 1184, 1346, 2556, 2773
AlwI GGATC 4 cut(s) 218, 443, 917, 2019
AlwNI CAGNNNCTG 1 cut(s) 95
AoxI GGCC 6 cut(s) 153, 173, 1081, 2258, 2505, 2694
ApeKI GCWGC 7 cut(s) 92, 95, 134, 191, 1696, 2093, 2333
ApoI RAATTY 4 cut(s) 443, 1349, 2611, 2754
ArsI GACNNNNNNTTYG 6 cut(s) 247, 279, 667, 699, 974, 1006
AseI ATTAAT 1 cut(s) 1899
Asp700I GAANNNNTTC 1 cut(s) 2175
AspLEI GCGC 1 cut(s) 1885
AspS9I GGNCC 2 cut(s) 141, 2690
AsuC2I CCSGG 1 cut(s) 588
AsuHPI GGTGA 6 cut(s) 430, 727, 758, 845, 1232, 1814
AsuNHI GCTAGC 2 cut(s) 1066, 1361
AvaII GGWCC 2 cut(s) 141, 2690
BalI TGGCCA 2 cut(s) 155, 1083
BanII GRGCYC 2 cut(s) 79, 291
BarI GAAGNNNNNNTAC 2 cut(s) 2135, 2167
BbsI GAAGAC 2 cut(s) 192, 910
Bbv12I GWGCWC 3 cut(s) 79, 212, 291
BbvCI CCTCAGC 1 cut(s) 2481
BbvI GCAGC 7 cut(s) 79, 82, 121, 178, 1708, 2080, 2320
BccI CCATC 8 cut(s) 70, 1092, 1211, 1430, 1577, 2093, 2129, 2309
BceAI ACGGC 1 cut(s) 160
BciT130I CCWGG 7 cut(s) 384, 516, 1346, 1514, 1629, 2203, 2736
BciVI GTATCC 2 cut(s) 2360, 2364
BclI TGATCA 3 cut(s) 42, 1254, 2016
BcnI CCSGG 1 cut(s) 588
BcoDI GTCTC 6 cut(s) 686, 975, 1184, 1346, 2556, 2773
BcuI ACTAGT 1 cut(s) 1646
BfaI CTAG 9 cut(s) 731, 1067, 1362, 1370, 1484, 1647, 1668, 1916, 2776
BfmI CTRYAG 1 cut(s) 96
BfuI GTATCC 2 cut(s) 2360, 2364
BglI GCCNNNNNGGC 1 cut(s) 2257
BisI GCNGC 8 cut(s) 93, 96, 135, 192, 1622, 1697, 2094, 2334
BlpI GCTNAGC 1 cut(s) 88
BlsI GCNGC 8 cut(s) 94, 97, 136, 193, 1623, 1698, 2095, 2335
Bme1390I CCNGG 8 cut(s) 384, 516, 588, 1346, 1514, 1629, 2203, 2736
Bme18I GGWCC 2 cut(s) 141, 2690
BmgT120I GGNCC 2 cut(s) 141, 2690
BmiI GGNNCC 1 cut(s) 142
BmrFI CCNGG 8 cut(s) 384, 516, 588, 1346, 1514, 1629, 2203, 2736
BmsI GCATC 5 cut(s) 314, 1494, 1633, 1852, 2691
BmtI GCTAGC 2 cut(s) 1070, 1365
BpiI GAAGAC 2 cut(s) 192, 910
BplI GAGNNNNNCTC 2 cut(s) 2132, 2164
BpmI CTGGAG 4 cut(s) 305, 1328, 1535, 2180
Bpu10I CCTNAGC 2 cut(s) 83, 2481
Bpu1102I GCTNAGC 1 cut(s) 88
BpuEI CTTGAG 3 cut(s) 760, 1233, 2423
BpuMI CCSGG 1 cut(s) 588
BsaHI GRCGYC 1 cut(s) 695
BsaJI CCNNGG 6 cut(s) 382, 1672, 1947, 2007, 2252, 2409
BsaWI WCCGGW 1 cut(s) 2682
BsaXI ACNNNNNCTCC 4 cut(s) 40, 70, 1986, 2016
Bse118I RCCGGY 4 cut(s) 697, 2394, 2692, 2744
Bse1I ACTGG 6 cut(s) 904, 1241, 1398, 1784, 2197, 2692
BseBI CCWGG 7 cut(s) 384, 516, 1346, 1514, 1629, 2203, 2736
BseDI CCNNGG 6 cut(s) 382, 1672, 1947, 2007, 2252, 2409
BseGI GGATG 4 cut(s) 502, 1624, 1843, 2671
BseMII CTCAG 8 cut(s) 102, 1058, 1179, 1456, 1604, 1743, 2415, 2495
BseNI ACTGG 6 cut(s) 904, 1241, 1398, 1784, 2197, 2692
BseRI GAGGAG 4 cut(s) 18, 21, 48, 1304
BseX3I CGGCCG 1 cut(s) 173
BseXI GCAGC 7 cut(s) 79, 82, 121, 178, 1708, 2080, 2320
BseYI CCCAGC 3 cut(s) 137, 1980, 2384
Bsh1236I CGCG 3 cut(s) 657, 1703, 1885
Bsh1285I CGRYCG 2 cut(s) 176, 319
BshFI GGCC 6 cut(s) 155, 175, 1083, 2260, 2507, 2696
BsiEI CGRYCG 2 cut(s) 176, 319
BsiHKAI GWGCWC 3 cut(s) 79, 212, 291
BsiSI CCGG 7 cut(s) 355, 588, 698, 2395, 2683, 2693, 2745
BslFI GGGAC 3 cut(s) 268, 794, 1600
BsmAI GTCTC 6 cut(s) 686, 975, 1184, 1346, 2556, 2773
BsmBI CGTCTC 4 cut(s) 686, 975, 1184, 1346
BsmFI GGGAC 3 cut(s) 268, 794, 1600
BsnI GGCC 6 cut(s) 155, 175, 1083, 2260, 2507, 2696
Bsp1286I GDGCHC 3 cut(s) 79, 212, 291
Bsp1407I TGTACA 1 cut(s) 1968
Bsp1720I GCTNAGC 1 cut(s) 88
Bsp19I CCATGG 1 cut(s) 1947
Bsp68I TCGCGA 1 cut(s) 1703
BspACI CCGC 9 cut(s) 417, 655, 847, 1152, 1355, 1622, 2065, 2380, 2398
BspANI GGCC 6 cut(s) 155, 175, 1083, 2260, 2507, 2696
BspCNI CTCAG 8 cut(s) 101, 1057, 1180, 1455, 1605, 1742, 2416, 2494
BspFNI CGCG 3 cut(s) 657, 1703, 1885
BspHI TCATGA 1 cut(s) 325
BspLI GGNNCC 1 cut(s) 142
BspMAI CTGCAG 1 cut(s) 100
BspOI GCTAGC 2 cut(s) 1070, 1365
BspPI GGATC 4 cut(s) 218, 443, 917, 2019
BspQI GCTCTTC 2 cut(s) 720, 2274
BsrFI RCCGGY 4 cut(s) 697, 2394, 2692, 2744
BsrGI TGTACA 1 cut(s) 1968
BsrI ACTGG 6 cut(s) 904, 1241, 1398, 1784, 2197, 2692
BssAI RCCGGY 4 cut(s) 697, 2394, 2692, 2744
BssECI CCNNGG 6 cut(s) 382, 1672, 1947, 2007, 2252, 2409
BssNI GRCGYC 1 cut(s) 695
BssT1I CCWWGG 5 cut(s) 1672, 1947, 2007, 2252, 2409
Bst2UI CCWGG 7 cut(s) 384, 516, 1346, 1514, 1629, 2203, 2736
Bst6I CTCTTC 6 cut(s) 459, 720, 883, 2133, 2217, 2274
BstACI GRCGYC 1 cut(s) 695
BstAUI TGTACA 1 cut(s) 1968
BstDEI CTNAG 9 cut(s) 83, 88, 1044, 1188, 1442, 1613, 1729, 2424, 2481
BstDSI CCRYGG 1 cut(s) 1947
BstENI CCTNNNNNAGG 2 cut(s) 888, 2361
BstF5I GGATG 4 cut(s) 502, 1624, 1843, 2671
BstFNI CGCG 3 cut(s) 657, 1703, 1885
BstHHI GCGC 1 cut(s) 1885
BstMAI GTCTC 6 cut(s) 686, 975, 1184, 1346, 2556, 2773
BstMCI CGRYCG 2 cut(s) 176, 319
BstMWI GCNNNNNNNGC 5 cut(s) 1715, 2257, 2266, 2330, 2404
BstNI CCWGG 7 cut(s) 384, 516, 1346, 1514, 1629, 2203, 2736
BstSCI CCNGG 8 cut(s) 382, 514, 586, 1344, 1512, 1627, 2201, 2734
BstSFI CTRYAG 1 cut(s) 96
BstUI CGCG 3 cut(s) 657, 1703, 1885
BstV1I GCAGC 7 cut(s) 79, 82, 121, 178, 1708, 2080, 2320
BstV2I GAAGAC 2 cut(s) 192, 910
BstX2I RGATCY 2 cut(s) 922, 2011
BstYI RGATCY 2 cut(s) 922, 2011
BstZI CGGCCG 1 cut(s) 173
BsuI GTATCC 2 cut(s) 2360, 2364
BsuRI GGCC 6 cut(s) 155, 175, 1083, 2260, 2507, 2696
BtgI CCRYGG 1 cut(s) 1947
BtsCI GGATG 4 cut(s) 502, 1624, 1843, 2671
BtsI GCAGTG 1 cut(s) 553
BtsIMutI CAGTG 4 cut(s) 370, 553, 1248, 2770
BtuMI TCGCGA 1 cut(s) 1703
CaiI CAGNNNCTG 1 cut(s) 95
CciI TCATGA 1 cut(s) 325
CfoI GCGC 1 cut(s) 1885
Cfr10I RCCGGY 4 cut(s) 697, 2394, 2692, 2744
Cfr13I GGNCC 2 cut(s) 141, 2690
CseI GACGC 1 cut(s) 703
Csp6I GTAC 6 cut(s) 628, 643, 1115, 1176, 1969, 2428
CspCI CAANNNNNGTGG 4 cut(s) 202, 237, 593, 628
CviQI GTAC 6 cut(s) 628, 643, 1115, 1176, 1969, 2428
DdeI CTNAG 9 cut(s) 83, 88, 1044, 1188, 1442, 1613, 1729, 2424, 2481
DraIII CACNNNGTG 2 cut(s) 2060, 2062
DrdI GACNNNNNNGTC 1 cut(s) 2591
DseDI GACNNNNNNGTC 1 cut(s) 2591
EaeI YGGCCR 4 cut(s) 153, 173, 1081, 2694
EagI CGGCCG 1 cut(s) 173
Eam1104I CTCTTC 6 cut(s) 459, 720, 883, 2133, 2217, 2274
EarI CTCTTC 6 cut(s) 459, 720, 883, 2133, 2217, 2274
EciI GGCGGA 1 cut(s) 1344
Ecl136II GAGCTC 2 cut(s) 77, 289
EclXI CGGCCG 1 cut(s) 173
Eco130I CCWWGG 5 cut(s) 1672, 1947, 2007, 2252, 2409
Eco24I GRGCYC 2 cut(s) 79, 291
Eco47I GGWCC 2 cut(s) 141, 2690
Eco52I CGGCCG 1 cut(s) 173
Eco53kI GAGCTC 2 cut(s) 77, 289
Eco57I CTGAAG 3 cut(s) 755, 2304, 2471
EcoICRI GAGCTC 2 cut(s) 77, 289
EcoNI CCTNNNNNAGG 2 cut(s) 888, 2361
EcoO109I RGGNCCY 1 cut(s) 141
EcoRI GAATTC 1 cut(s) 2754
EcoRII CCWGG 7 cut(s) 382, 514, 1344, 1512, 1627, 2201, 2734
EcoT14I CCWWGG 5 cut(s) 1672, 1947, 2007, 2252, 2409
EcoT38I GRGCYC 2 cut(s) 79, 291
ErhI CCWWGG 5 cut(s) 1672, 1947, 2007, 2252, 2409
Esp3I CGTCTC 4 cut(s) 686, 975, 1184, 1346
FalI AAGNNNNNCTT 4 cut(s) 1101, 1133, 2447, 2479
FaqI GGGAC 3 cut(s) 268, 794, 1600
FauI CCCGC 2 cut(s) 424, 854
FauNDI CATATG 4 cut(s) 1024, 1334, 2089, 2309
FbaI TGATCA 3 cut(s) 42, 1254, 2016
FblI GTMKAC 2 cut(s) 866, 1656
Fnu4HI GCNGC 8 cut(s) 93, 96, 135, 192, 1622, 1697, 2094, 2334
FokI GGATG 4 cut(s) 509, 1611, 1830, 2678
FriOI GRGCYC 2 cut(s) 79, 291
Fsp4HI GCNGC 8 cut(s) 93, 96, 135, 192, 1622, 1697, 2094, 2334
FspBI CTAG 9 cut(s) 731, 1067, 1362, 1370, 1484, 1647, 1668, 1916, 2776
GlaI GCGC 1 cut(s) 1884
GluI GCNGC 8 cut(s) 93, 96, 135, 192, 1622, 1697, 2094, 2334
GsaI CCCAGC 3 cut(s) 141, 1984, 2388
GsuI CTGGAG 4 cut(s) 305, 1328, 1535, 2180
HaeIII GGCC 6 cut(s) 155, 175, 1083, 2260, 2507, 2696
HapII CCGG 7 cut(s) 355, 588, 698, 2395, 2683, 2693, 2745
HgaI GACGC 1 cut(s) 703
HhaI GCGC 1 cut(s) 1885
Hin1I GRCGYC 1 cut(s) 695
Hin6I GCGC 1 cut(s) 1883
HinP1I GCGC 1 cut(s) 1883
HincII GTYRAC 2 cut(s) 180, 373
HindII GTYRAC 2 cut(s) 180, 373
HindIII AAGCTT 2 cut(s) 1707, 1835
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 7 cut(s) 355, 588, 698, 2395, 2683, 2693, 2745
HphI GGTGA 6 cut(s) 430, 727, 758, 845, 1232, 1814
Hpy166II GTNNAC 8 cut(s) 180, 373, 604, 628, 867, 1223, 1657, 1873
Hpy188III TCNNGA 9 cut(s) 284, 326, 824, 1702, 1856, 1991, 2423, 2440, 2570
Hpy8I GTNNAC 8 cut(s) 180, 373, 604, 628, 867, 1223, 1657, 1873
HpyAV CCTTC 6 cut(s) 587, 1124, 2161, 2203, 2408, 2504
HpyCH4IV ACGT 2 cut(s) 582, 677
HpyF10VI GCNNNNNNNGC 5 cut(s) 1715, 2257, 2266, 2330, 2404
HpyF3I CTNAG 9 cut(s) 83, 88, 1044, 1188, 1442, 1613, 1729, 2424, 2481
HpySE526I ACGT 2 cut(s) 582, 677
Hsp92I GRCGYC 1 cut(s) 695
HspAI GCGC 1 cut(s) 1883
KroI GCCGGC 1 cut(s) 2394
KroNI GCCGGC 1 cut(s) 2396
Ksp22I TGATCA 3 cut(s) 42, 1254, 2016
KspAI GTTAAC 1 cut(s) 373
LguI GCTCTTC 2 cut(s) 720, 2274
LmnI GCTCC 5 cut(s) 74, 286, 518, 1516, 2153
Lsp1109I GCAGC 7 cut(s) 79, 82, 121, 178, 1708, 2080, 2320
LweI GCATC 5 cut(s) 314, 1494, 1633, 1852, 2691
MaeI CTAG 9 cut(s) 731, 1067, 1362, 1370, 1484, 1647, 1668, 1916, 2776
MaeII ACGT 2 cut(s) 582, 677
MaeIII GTNAC 7 cut(s) 733, 995, 1685, 1856, 2067, 2473, 2647
MflI RGATCY 2 cut(s) 922, 2011
MhlI GDGCHC 3 cut(s) 79, 212, 291
MlsI TGGCCA 2 cut(s) 155, 1083
MluNI TGGCCA 2 cut(s) 155, 1083
MlyI GAGTC 6 cut(s) 829, 946, 1434, 1644, 1693, 1721
MmeI TCCRAC 1 cut(s) 682
Mox20I TGGCCA 2 cut(s) 155, 1083
MroNI GCCGGC 1 cut(s) 2394
MroXI GAANNNNTTC 1 cut(s) 2175
MscI TGGCCA 2 cut(s) 155, 1083
MslI CAYNNNNRTG 4 cut(s) 67, 546, 1629, 1854
Msp20I TGGCCA 2 cut(s) 155, 1083
MspA1I CMGCKG 3 cut(s) 92, 191, 1980
MspI CCGG 7 cut(s) 355, 588, 698, 2395, 2683, 2693, 2745
MspR9I CCNGG 8 cut(s) 384, 516, 588, 1346, 1514, 1629, 2203, 2736
MvaI CCWGG 7 cut(s) 384, 516, 1346, 1514, 1629, 2203, 2736
MvnI CGCG 3 cut(s) 657, 1703, 1885
MwoI GCNNNNNNNGC 5 cut(s) 1715, 2257, 2266, 2330, 2404
NaeI GCCGGC 1 cut(s) 2396
NciI CCSGG 1 cut(s) 588
NcoI CCATGG 1 cut(s) 1947
NdeI CATATG 4 cut(s) 1024, 1334, 2089, 2309
NgoMIV GCCGGC 1 cut(s) 2394
NheI GCTAGC 2 cut(s) 1066, 1361
NlaIV GGNNCC 1 cut(s) 142
NmeAIII GCCGAG 2 cut(s) 151, 2513
NmuCI GTSAC 5 cut(s) 733, 995, 1685, 1856, 2647
NruI TCGCGA 1 cut(s) 1703
OliI CACNNNNGTG 1 cut(s) 1854
PagI TCATGA 1 cut(s) 325
PciSI GCTCTTC 2 cut(s) 720, 2274
PcsI WCGNNNNNNNCGW 1 cut(s) 683
PdiI GCCGGC 1 cut(s) 2396
PdmI GAANNNNTTC 1 cut(s) 2175
PfeI GAWTC 8 cut(s) 277, 394, 1496, 1828, 1891, 2042, 2186, 2291
PflFI GACNNNGTC 1 cut(s) 184
PflMI CCANNNNNTGG 1 cut(s) 1953
PfoI TCCNGGA 3 cut(s) 514, 586, 1344
PkrI GCNGC 8 cut(s) 94, 97, 136, 193, 1623, 1698, 2095, 2335
PleI GAGTC 6 cut(s) 828, 945, 1434, 1643, 1692, 1721
PpsI GAGTC 6 cut(s) 828, 945, 1434, 1643, 1692, 1721
PpuMI RGGWCCY 1 cut(s) 141
PshBI ATTAAT 1 cut(s) 1899
PsiI TTATAA 1 cut(s) 1790
Psp124BI GAGCTC 2 cut(s) 79, 291
Psp1406I AACGTT 1 cut(s) 582
Psp5II RGGWCCY 1 cut(s) 141
Psp6I CCWGG 7 cut(s) 382, 514, 1344, 1512, 1627, 2201, 2734
PspFI CCCAGC 3 cut(s) 137, 1980, 2384
PspGI CCWGG 7 cut(s) 382, 514, 1344, 1512, 1627, 2201, 2734
PspN4I GGNNCC 1 cut(s) 142
PspPI GGNCC 2 cut(s) 141, 2690
PspPPI RGGWCCY 1 cut(s) 141
PstI CTGCAG 1 cut(s) 100
PstNI CAGNNNCTG 1 cut(s) 95
PsuI RGATCY 2 cut(s) 922, 2011
PsyI GACNNNGTC 1 cut(s) 184
PvuII CAGCTG 3 cut(s) 92, 191, 1980
RruI TCGCGA 1 cut(s) 1703
RsaI GTAC 6 cut(s) 629, 644, 1116, 1177, 1970, 2429
RsaNI GTAC 6 cut(s) 628, 643, 1115, 1176, 1969, 2428
RseI CAYNNNNRTG 4 cut(s) 67, 546, 1629, 1854
SacI GAGCTC 2 cut(s) 79, 291
SapI GCTCTTC 2 cut(s) 720, 2274
SatI GCNGC 8 cut(s) 93, 96, 135, 192, 1622, 1697, 2094, 2334
Sau96I GGNCC 2 cut(s) 141, 2690
SchI GAGTC 6 cut(s) 829, 946, 1434, 1644, 1693, 1721
ScrFI CCNGG 8 cut(s) 384, 516, 588, 1346, 1514, 1629, 2203, 2736
SduI GDGCHC 3 cut(s) 79, 212, 291
SfaNI GCATC 5 cut(s) 314, 1494, 1633, 1852, 2691
SfcI CTRYAG 1 cut(s) 96
SinI GGWCC 2 cut(s) 141, 2690
SmiMI CAYNNNNRTG 4 cut(s) 67, 546, 1629, 1854
SmlI CTYRAG 3 cut(s) 739, 1248, 2438
SmoI CTYRAG 3 cut(s) 739, 1248, 2438
SpeI ACTAGT 1 cut(s) 1646
SsiI CCGC 9 cut(s) 417, 655, 847, 1152, 1355, 1622, 2065, 2380, 2398
SspMI CTAG 9 cut(s) 731, 1067, 1362, 1370, 1484, 1647, 1668, 1916, 2776
SstI GAGCTC 2 cut(s) 79, 291
StyD4I CCNGG 8 cut(s) 382, 514, 586, 1344, 1512, 1627, 2201, 2734
StyI CCWWGG 5 cut(s) 1672, 1947, 2007, 2252, 2409
TaiI ACGT 2 cut(s) 585, 680
TaqI TCGA 3 cut(s) 315, 686, 886
TaqII GACCGA 1 cut(s) 1389
TatI WGTACW 3 cut(s) 642, 1114, 1968
TauI GCSGC 1 cut(s) 1624
TfiI GAWTC 8 cut(s) 277, 394, 1496, 1828, 1891, 2042, 2186, 2291
TscAI CASTG 4 cut(s) 370, 553, 1248, 2770
TseFI GTSAC 5 cut(s) 733, 995, 1685, 1856, 2647
TseI GCWGC 7 cut(s) 92, 95, 134, 191, 1696, 2093, 2333
Tsp45I GTSAC 5 cut(s) 733, 995, 1685, 1856, 2647
TspGWI ACGGA 2 cut(s) 119, 1653
TspRI CASTG 4 cut(s) 370, 553, 1248, 2770
Tth111I GACNNNGTC 1 cut(s) 184
Van91I CCANNNNNTGG 1 cut(s) 1953
VpaK11BI GGWCC 2 cut(s) 141, 2690
VspI ATTAAT 1 cut(s) 1899
XagI CCTNNNNNAGG 2 cut(s) 888, 2361
XapI RAATTY 4 cut(s) 443, 1349, 2611, 2754
XmiI GTMKAC 2 cut(s) 866, 1656
XmnI GAANNNNTTC 1 cut(s) 2175
XspI CTAG 9 cut(s) 731, 1067, 1362, 1370, 1484, 1647, 1668, 1916, 2776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.