Rh3DG066700

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
4497872 .. 4502516
4645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG066700.1

Sequence Viewer

Length: 2781 bp
ATGCTTCATTTCAAGTGTCATCATACTCCTCCTCTCAACTTGATCAGAACCAAACCTCATCCATCTCCGTGTGGAGCAGCTCGCCTGAGCTCAGCTGTTGCAGTTAATAGCAGACCACTAGCGCTCTTATTCCGTACTGCTGGTTCCTTGTTCATGGCCAATGTGAGACGATCCCGGCCGTTGACTGTGTCAGCTGCCAAGTCTTCCCAGAGCACCACCACCATTGATCCTCCAAGTGATGACACGAAGATCAAAGGGACTGTGGTTTTGATGAAGAAGAATCTTCTGGAGCTCAACGACCTCACAGCATCTTTCATCGACCGTGTTCATGAGCTTTTGGGGAAATCTGTTTCTCTCCGCCTCATCAGTGCTGTTAACACTGTTCCTGGAAATGGGAATCAAGGAAAAATTGGGAAGCCCGCTTATTTGGAGAATTGGATCACCAAATTTACTCCCTTGACAGCAGACGAGTGTGCGTTTGAGGTTAATTTTGATTGGGATGAGAAGATTGGAGTTCCAGGAGCTTTCATCATAAGAAATGAACATGGCAGTGAGTTTTACTTGAAATCCCTCACACTCGGAAACGTTCCCGGAGAAGGAAAAGTCCACTTTGATTGCAACTCATGGGTGTACCCTGCTCACAAGTACAAGAAAGACCGTGTTTTCTTCACTAACAAGACATATCTTTCGAGTGAGACGCCTGTTGGACTAAAGAAGTTTAGAGAAGAAGAGCTAGTGACCTTGAGAGGTGATGGTGTTGAAAAGGGAGAGCTTCAGACATGGGACAGGGTTTATGACTATGCAACCTACAACGATTTGGGGAGTCCAGATAAGGGTGAAAAATATGCTCGCCCAATTCTCGGAGGGTCTACCAAGTTCCCTTATCCTAGAAGAGGAAGAACTGGAAGACCAGCAACCAAGAAAGATCCCAACAGTGAGAGCCCTCTGCCTCTTATTGAGAGCTTATTTATATATGTTCCAAGAGACGAAAAATTTGGTCACTTAAAGATGTCAGACTTGATTGCATATGCCCTGAAATCCATATCTCAGATACTTAAACCTGATGAGCTAGCTACTCTACTTGGCCATCAAAAAGAGTTTAACAGCTTGGAAGATGTACTTAAACTCTATGAAGGAGGATTAGAGTTGCCAAACGGATTGTTGAAGTTTGTTAGGAGTACCACCCCTGCTGAGACGGTCAAGGAACTTTTCCGAACTGATGGTGAACGATTACTAAAGTTTCCAGTGCCTCAAGTGATCAAAGAGGATAAGTCGGCATGGAGAACTGATGAGGAGTTTGCAAGAGAAATGTTGGCTGGTCTAAACCCTGTCAGCATACGTCGTCTCCAGGAATTTCCGCCAGCTAGCAAGCTAGACCGAAATGTATATGGAGATCAAACCAGTAAAATAACCAAAGAACACATAGCCGATAAATTAGATGGACTCAGCATAGATGAGGCAATCAACAAGAATAAGCTATTCATACTAGACCACCATGATTCACTGATGCCTTACCTGGAGCGTATAAACTCAACTGATTTGGTAAAAGGTTATGCAAGCAGGACACTCCTTTTCTTAACCAATGATGGGACTTTGAAGCCAATAGCTATTGAACTGAGCTTGCCACATCCTGGTGGAGTCGGTTGCACTAGTGAAGTCTACACTCCGTCTAGCCAAGGCATTGAGAGTCACATTTGGCAGCTCGCGAAAGCTTATGTAGCTATAAACGACTCAGGCTATCATCAGCTTGTCAGCCACTGGTTGAGAACTCATGCGGTGATTGAGCCGGTTATAATAGCAACAAACAGGCAGTTGAGCGTGCTTCACCCAATTCACAAGCTTCTGCATCCTCACTTTCGTGACACTATGAATGTAAATGCAGTGGCGCGACAGATTCTCATTAATGCTGGTGGAGTGCTAGAGAACACAGTCTTTCCTGCAAAGTATTCCATGGAATGGTCATCTGTTATGTACAAGGACAGCTGGGTTTTTCCTGAACAAGCACTCCCCAAGGATCTGATCAAAAGAGGAATGGCAGTTGAGGATTCAAGTGCCTCACACGGTGTGCGGTTACTAATAGAGGACTATCCATATGCTGCTGATGGGCTTGAAATCTGGTCTGCCATCAAAACCTGGGTGGAAGAGTATTGCTCCTTCTACTTCAAAACTGATGAAATGGTTCAAAAGGACTCGGAACTCCAGTCCTGGTGGAAGGAACTCCGAGAAGAGGGTCATGGCGACAAGAAAGATGAGCCTTGGTGGCCTAAAATGCAGACTGTTGAAGAGCTGATAGAATCATGCACCACCATCATATGGACTGCTTCAGCTTACCATGCTGCAATCAATTTCGGGCAGTACCCTTATGGAGGATACCCTGCAAACCGCCCCAGCATAAGCCGGCGGTTCATGCCTAAGGAAGGCACTCCTGAGTACGAGCAACTCAAGAACAACCCTGAAAAGGCTTTCTTGGAAACAGTTACTCCTCAGCTTCAGACCCTCCTTGGCATGGCCTCCATTGAGATACTGTCAAGGCACTCGGCTGATGAGATTTACTTGGGGGAGAGAGACAGTCAAGAATGGACAACAGACACCAAAGTCTTGCAAGCATTTGAGAATTTCAGAAACAAGCTCAAAGCAGTTGAGGAAAGAGTGACAAAGATGAACAAGGATGACAAGTTGAAGAACCGGACTGGACCGGCCAAGATGCCTTACACTCTGCTCTATCCTACCAGCGAACCTGGACTTACCGGCAAGGGAATTCCCAACAGTGTCTCAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

926

Amino Acids

104.49

Weight (kDa)

6.98

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 123 - 223 9.1e-19 PLAT/LH2 domain
Lipoxygenase PF00305 236 - 909 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1793
AasI GACNNNNNNGTC 1 cut(s) 2594
AccB7I CCANNNNNTGG 3 cut(s) 1631, 1956, 2313
AccI GTMKAC 2 cut(s) 869, 1659
AccII CGCG 2 cut(s) 1706, 1888
AciI CCGC 7 cut(s) 358, 420, 1358, 1775, 2068, 2383, 2401
AclI AACGTT 1 cut(s) 585
AclWI GGATC 5 cut(s) 165, 221, 446, 920, 2022
AcoI YGGCCR 4 cut(s) 156, 176, 1084, 2697
AcsI RAATTY 5 cut(s) 446, 992, 1352, 2614, 2757
AcuI CTGAAG 3 cut(s) 758, 2307, 2474
AcyI GRCGYC 1 cut(s) 698
AdeI CACNNNGTG 2 cut(s) 2063, 2065
AfaI GTAC 8 cut(s) 136, 632, 647, 1119, 1180, 1973, 2357, 2432
AfeI AGCGCT 1 cut(s) 123
AhlI ACTAGT 1 cut(s) 1649
AjnI CCWGG 8 cut(s) 385, 517, 1347, 1515, 1630, 2132, 2204, 2737
AleI CACNNNNGTG 1 cut(s) 1857
AloI GAACNNNNNNTCC 2 cut(s) 1989, 2021
Alw21I GWGCWC 3 cut(s) 92, 215, 294
Alw26I GTCTC 7 cut(s) 160, 689, 978, 1187, 1349, 2559, 2776
AlwI GGATC 5 cut(s) 165, 221, 446, 920, 2022
AlwNI CAGNNNCTG 1 cut(s) 1758
Aor51HI AGCGCT 1 cut(s) 123
AoxI GGCC 6 cut(s) 156, 176, 1084, 2261, 2508, 2697
ApeKI GCWGC 5 cut(s) 77, 194, 1699, 2096, 2336
ApoI RAATTY 5 cut(s) 446, 992, 1352, 2614, 2757
ArsI GACNNNNNNTTYG 6 cut(s) 250, 282, 670, 702, 977, 1009
AseI ATTAAT 1 cut(s) 1902
Asp700I GAANNNNTTC 1 cut(s) 2178
AspLEI GCGC 2 cut(s) 124, 1888
AspS9I GGNCC 1 cut(s) 2693
AsuC2I CCSGG 2 cut(s) 175, 591
AsuHPI GGTGA 6 cut(s) 433, 761, 848, 1235, 1789, 1817
AsuNHI GCTAGC 2 cut(s) 1069, 1364
AvaII GGWCC 1 cut(s) 2693
AxyI CCTNAGG 1 cut(s) 2412
BalI TGGCCA 2 cut(s) 158, 1086
BanII GRGCYC 3 cut(s) 92, 294, 944
BarI GAAGNNNNNNTAC 2 cut(s) 2138, 2170
BbsI GAAGAC 2 cut(s) 195, 913
Bbv12I GWGCWC 3 cut(s) 92, 215, 294
BbvCI CCTCAGC 1 cut(s) 2484
BbvI GCAGC 5 cut(s) 89, 181, 1711, 2083, 2323
BccI CCATC 9 cut(s) 70, 746, 1095, 1214, 1433, 1580, 2096, 2132, 2315
BceAI ACGGC 1 cut(s) 163
BciT130I CCWGG 8 cut(s) 387, 519, 1349, 1517, 1632, 2134, 2206, 2739
BciVI GTATCC 1 cut(s) 2363
BclI TGATCA 3 cut(s) 42, 1257, 2019
BcnI CCSGG 2 cut(s) 175, 591
BcoDI GTCTC 7 cut(s) 160, 689, 978, 1187, 1349, 2559, 2776
BcuI ACTAGT 1 cut(s) 1649
BfoI RGCGCY 1 cut(s) 125
BfuI GTATCC 1 cut(s) 2363
BglI GCCNNNNNGGC 1 cut(s) 2260
BisI GCNGC 5 cut(s) 78, 195, 1700, 2097, 2337
BlpI GCTNAGC 1 cut(s) 91
BlsI GCNGC 5 cut(s) 79, 196, 1701, 2098, 2338
Bme18I GGWCC 1 cut(s) 2693
BmgT120I GGNCC 1 cut(s) 2693
BmiI GGNNCC 1 cut(s) 145
BmsI GCATC 4 cut(s) 317, 1497, 1855, 2694
BmtI GCTAGC 2 cut(s) 1073, 1368
BpiI GAAGAC 2 cut(s) 195, 913
BplI GAGNNNNNCTC 2 cut(s) 2135, 2167
BpmI CTGGAG 4 cut(s) 308, 1331, 1538, 2183
Bpu10I CCTNAGC 2 cut(s) 86, 2484
Bpu1102I GCTNAGC 1 cut(s) 91
BpuEI CTTGAG 3 cut(s) 763, 1236, 2426
BpuMI CCSGG 2 cut(s) 175, 591
BsaHI GRCGYC 1 cut(s) 698
BsaJI CCNNGG 6 cut(s) 1675, 1950, 2010, 2133, 2255, 2500
BsaWI WCCGGW 1 cut(s) 2685
BsaXI ACNNNNNCTCC 6 cut(s) 1329, 1359, 1989, 2019, 2464, 2494
Bse118I RCCGGY 4 cut(s) 1786, 2397, 2695, 2747
Bse1I ACTGG 6 cut(s) 907, 1244, 1401, 1763, 2200, 2695
Bse21I CCTNAGG 1 cut(s) 2412
BseBI CCWGG 8 cut(s) 387, 519, 1349, 1517, 1632, 2134, 2206, 2739
BseDI CCNNGG 6 cut(s) 1675, 1950, 2010, 2133, 2255, 2500
BseGI GGATG 5 cut(s) 58, 505, 1627, 1846, 2674
BseMII CTCAG 9 cut(s) 77, 105, 1061, 1182, 1459, 1607, 1746, 2418, 2498
BseNI ACTGG 6 cut(s) 907, 1244, 1401, 1763, 2200, 2695
BseRI GAGGAG 4 cut(s) 18, 21, 1307, 2472
BseX3I CGGCCG 1 cut(s) 176
BseXI GCAGC 5 cut(s) 89, 181, 1711, 2083, 2323
BseYI CCCAGC 2 cut(s) 1983, 2387
Bsh1236I CGCG 2 cut(s) 1706, 1888
Bsh1285I CGRYCG 2 cut(s) 179, 322
BshFI GGCC 6 cut(s) 158, 178, 1086, 2263, 2510, 2699
BsiEI CGRYCG 2 cut(s) 179, 322
BsiHKAI GWGCWC 3 cut(s) 92, 215, 294
BsiSI CCGG 7 cut(s) 175, 591, 1787, 2398, 2686, 2696, 2748
BslFI GGGAC 3 cut(s) 271, 797, 1603
BsmAI GTCTC 7 cut(s) 160, 689, 978, 1187, 1349, 2559, 2776
BsmBI CGTCTC 5 cut(s) 160, 689, 978, 1187, 1349
BsmFI GGGAC 3 cut(s) 271, 797, 1603
BsnI GGCC 6 cut(s) 158, 178, 1086, 2263, 2510, 2699
Bsp1286I GDGCHC 4 cut(s) 92, 215, 294, 944
Bsp1407I TGTACA 1 cut(s) 1971
Bsp1720I GCTNAGC 1 cut(s) 91
Bsp19I CCATGG 1 cut(s) 1950
Bsp68I TCGCGA 1 cut(s) 1706
BspACI CCGC 7 cut(s) 358, 420, 1358, 1775, 2068, 2383, 2401
BspANI GGCC 6 cut(s) 158, 178, 1086, 2263, 2510, 2699
BspCNI CTCAG 9 cut(s) 78, 104, 1060, 1183, 1458, 1608, 1745, 2419, 2497
BspFNI CGCG 2 cut(s) 1706, 1888
BspHI TCATGA 1 cut(s) 328
BspLI GGNNCC 1 cut(s) 145
BspOI GCTAGC 2 cut(s) 1073, 1368
BspPI GGATC 5 cut(s) 165, 221, 446, 920, 2022
BspQI GCTCTTC 2 cut(s) 723, 2277
BsrFI RCCGGY 4 cut(s) 1786, 2397, 2695, 2747
BsrGI TGTACA 1 cut(s) 1971
BsrI ACTGG 6 cut(s) 907, 1244, 1401, 1763, 2200, 2695
BssAI RCCGGY 4 cut(s) 1786, 2397, 2695, 2747
BssECI CCNNGG 6 cut(s) 1675, 1950, 2010, 2133, 2255, 2500
BssNI GRCGYC 1 cut(s) 698
BssT1I CCWWGG 5 cut(s) 1675, 1950, 2010, 2255, 2500
Bst2UI CCWGG 8 cut(s) 387, 519, 1349, 1517, 1632, 2134, 2206, 2739
Bst6I CTCTTC 5 cut(s) 723, 886, 2136, 2220, 2277
BstACI GRCGYC 1 cut(s) 698
BstAUI TGTACA 1 cut(s) 1971
BstDSI CCRYGG 1 cut(s) 1950
BstENI CCTNNNNNAGG 3 cut(s) 891, 2364, 2415
BstF5I GGATG 5 cut(s) 58, 505, 1627, 1846, 2674
BstFNI CGCG 2 cut(s) 1706, 1888
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 2 cut(s) 124, 1888
BstMAI GTCTC 7 cut(s) 160, 689, 978, 1187, 1349, 2559, 2776
BstMCI CGRYCG 2 cut(s) 179, 322
BstMWI GCNNNNNNNGC 5 cut(s) 1718, 2260, 2269, 2333, 2407
BstNI CCWGG 8 cut(s) 387, 519, 1349, 1517, 1632, 2134, 2206, 2739
BstUI CGCG 2 cut(s) 1706, 1888
BstV1I GCAGC 5 cut(s) 89, 181, 1711, 2083, 2323
BstV2I GAAGAC 2 cut(s) 195, 913
BstX2I RGATCY 2 cut(s) 925, 2014
BstYI RGATCY 2 cut(s) 925, 2014
BstZI CGGCCG 1 cut(s) 176
Bsu36I CCTNAGG 1 cut(s) 2412
BsuI GTATCC 1 cut(s) 2363
BsuRI GGCC 6 cut(s) 158, 178, 1086, 2263, 2510, 2699
BtgI CCRYGG 1 cut(s) 1950
BtsCI GGATG 5 cut(s) 58, 505, 1627, 1846, 2674
BtsI GCAGTG 2 cut(s) 556, 1887
BtsIMutI CAGTG 9 cut(s) 373, 378, 556, 940, 1251, 1502, 1756, 1887, 2773
BtuMI TCGCGA 1 cut(s) 1706
CaiI CAGNNNCTG 1 cut(s) 1758
CciI TCATGA 1 cut(s) 328
CfoI GCGC 2 cut(s) 124, 1888
Cfr10I RCCGGY 4 cut(s) 1786, 2397, 2695, 2747
Cfr13I GGNCC 1 cut(s) 2693
CseI GACGC 1 cut(s) 706
Csp6I GTAC 8 cut(s) 135, 631, 646, 1118, 1179, 1972, 2356, 2431
CspCI CAANNNNNGTGG 4 cut(s) 205, 240, 596, 631
CviQI GTAC 8 cut(s) 135, 631, 646, 1118, 1179, 1972, 2356, 2431
DraIII CACNNNGTG 2 cut(s) 2063, 2065
DrdI GACNNNNNNGTC 1 cut(s) 2594
DseDI GACNNNNNNGTC 1 cut(s) 2594
EaeI YGGCCR 4 cut(s) 156, 176, 1084, 2697
EagI CGGCCG 1 cut(s) 176
Eam1104I CTCTTC 5 cut(s) 723, 886, 2136, 2220, 2277
EarI CTCTTC 5 cut(s) 723, 886, 2136, 2220, 2277
EciI GGCGGA 2 cut(s) 347, 1347
Ecl136II GAGCTC 2 cut(s) 90, 292
EclXI CGGCCG 1 cut(s) 176
Eco130I CCWWGG 5 cut(s) 1675, 1950, 2010, 2255, 2500
Eco24I GRGCYC 3 cut(s) 92, 294, 944
Eco47I GGWCC 1 cut(s) 2693
Eco47III AGCGCT 1 cut(s) 123
Eco52I CGGCCG 1 cut(s) 176
Eco53kI GAGCTC 2 cut(s) 90, 292
Eco57I CTGAAG 3 cut(s) 758, 2307, 2474
Eco81I CCTNAGG 1 cut(s) 2412
EcoICRI GAGCTC 2 cut(s) 90, 292
EcoNI CCTNNNNNAGG 3 cut(s) 891, 2364, 2415
EcoRI GAATTC 1 cut(s) 2757
EcoRII CCWGG 8 cut(s) 385, 517, 1347, 1515, 1630, 2132, 2204, 2737
EcoT14I CCWWGG 5 cut(s) 1675, 1950, 2010, 2255, 2500
EcoT38I GRGCYC 3 cut(s) 92, 294, 944
ErhI CCWWGG 5 cut(s) 1675, 1950, 2010, 2255, 2500
Esp3I CGTCTC 5 cut(s) 160, 689, 978, 1187, 1349
FalI AAGNNNNNCTT 4 cut(s) 1104, 1136, 2450, 2482
FaqI GGGAC 3 cut(s) 271, 797, 1603
FauI CCCGC 1 cut(s) 427
FauNDI CATATG 3 cut(s) 1027, 2092, 2312
FbaI TGATCA 3 cut(s) 42, 1257, 2019
FblI GTMKAC 2 cut(s) 869, 1659
Fnu4HI GCNGC 5 cut(s) 78, 195, 1700, 2097, 2337
FokI GGATG 5 cut(s) 45, 512, 1614, 1833, 2681
FriOI GRGCYC 3 cut(s) 92, 294, 944
Fsp4HI GCNGC 5 cut(s) 78, 195, 1700, 2097, 2337
GlaI GCGC 2 cut(s) 123, 1887
GluI GCNGC 5 cut(s) 78, 195, 1700, 2097, 2337
GsaI CCCAGC 2 cut(s) 1987, 2391
GsuI CTGGAG 4 cut(s) 308, 1331, 1538, 2183
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 6 cut(s) 158, 178, 1086, 2263, 2510, 2699
HapII CCGG 7 cut(s) 175, 591, 1787, 2398, 2686, 2696, 2748
HgaI GACGC 1 cut(s) 706
HhaI GCGC 2 cut(s) 124, 1888
Hin1I GRCGYC 1 cut(s) 698
Hin6I GCGC 2 cut(s) 122, 1886
HinP1I GCGC 2 cut(s) 122, 1886
HincII GTYRAC 2 cut(s) 183, 376
HindII GTYRAC 2 cut(s) 183, 376
HindIII AAGCTT 2 cut(s) 1710, 1838
HpaI GTTAAC 1 cut(s) 376
HpaII CCGG 7 cut(s) 175, 591, 1787, 2398, 2686, 2696, 2748
HphI GGTGA 6 cut(s) 433, 761, 848, 1235, 1789, 1817
Hpy166II GTNNAC 7 cut(s) 183, 376, 607, 631, 870, 1226, 1660
Hpy188III TCNNGA 9 cut(s) 287, 329, 827, 1705, 1859, 1994, 2426, 2443, 2573
Hpy8I GTNNAC 7 cut(s) 183, 376, 607, 631, 870, 1226, 1660
Hpy99I CGWCG 1 cut(s) 1344
HpyAV CCTTC 5 cut(s) 590, 1127, 2164, 2206, 2411
HpyCH4IV ACGT 2 cut(s) 585, 1339
HpyF10VI GCNNNNNNNGC 5 cut(s) 1718, 2260, 2269, 2333, 2407
HpySE526I ACGT 2 cut(s) 585, 1339
Hsp92I GRCGYC 1 cut(s) 698
HspAI GCGC 2 cut(s) 122, 1886
KroI GCCGGC 1 cut(s) 2397
KroNI GCCGGC 1 cut(s) 2399
Ksp22I TGATCA 3 cut(s) 42, 1257, 2019
KspAI GTTAAC 1 cut(s) 376
LguI GCTCTTC 2 cut(s) 723, 2277
LmnI GCTCC 5 cut(s) 74, 289, 521, 1519, 2156
Lsp1109I GCAGC 5 cut(s) 89, 181, 1711, 2083, 2323
LweI GCATC 4 cut(s) 317, 1497, 1855, 2694
MaeII ACGT 2 cut(s) 585, 1339
MaeIII GTNAC 7 cut(s) 736, 998, 1688, 1859, 2070, 2476, 2650
MflI RGATCY 2 cut(s) 925, 2014
MhlI GDGCHC 4 cut(s) 92, 215, 294, 944
MlsI TGGCCA 2 cut(s) 158, 1086
MluNI TGGCCA 2 cut(s) 158, 1086
MlyI GAGTC 6 cut(s) 832, 1437, 1647, 1696, 1724, 2183
MmeI TCCRAC 1 cut(s) 685
Mox20I TGGCCA 2 cut(s) 158, 1086
MroNI GCCGGC 1 cut(s) 2397
MroXI GAANNNNTTC 1 cut(s) 2178
MscI TGGCCA 2 cut(s) 158, 1086
MseI TTAA 9 cut(s) 105, 375, 486, 1004, 1056, 1101, 1122, 1577, 1902
MslI CAYNNNNRTG 4 cut(s) 67, 549, 1632, 1857
Msp20I TGGCCA 2 cut(s) 158, 1086
MspA1I CMGCKG 3 cut(s) 95, 194, 1983
MspI CCGG 7 cut(s) 175, 591, 1787, 2398, 2686, 2696, 2748
MvaI CCWGG 8 cut(s) 387, 519, 1349, 1517, 1632, 2134, 2206, 2739
MvnI CGCG 2 cut(s) 1706, 1888
MwoI GCNNNNNNNGC 5 cut(s) 1718, 2260, 2269, 2333, 2407
NaeI GCCGGC 1 cut(s) 2399
NciI CCSGG 2 cut(s) 175, 591
NcoI CCATGG 1 cut(s) 1950
NdeI CATATG 3 cut(s) 1027, 2092, 2312
NgoMIV GCCGGC 1 cut(s) 2397
NheI GCTAGC 2 cut(s) 1069, 1364
NlaIV GGNNCC 1 cut(s) 145
NmeAIII GCCGAG 1 cut(s) 2516
NmuCI GTSAC 5 cut(s) 736, 998, 1688, 1859, 2650
NruI TCGCGA 1 cut(s) 1706
OliI CACNNNNGTG 1 cut(s) 1857
PagI TCATGA 1 cut(s) 328
PciSI GCTCTTC 2 cut(s) 723, 2277
PdiI GCCGGC 1 cut(s) 2399
PdmI GAANNNNTTC 1 cut(s) 2178
PfeI GAWTC 6 cut(s) 280, 397, 1499, 1894, 2045, 2294
PflFI GACNNNGTC 1 cut(s) 187
PflMI CCANNNNNTGG 3 cut(s) 1631, 1956, 2313
PfoI TCCNGGA 4 cut(s) 385, 517, 589, 1347
PkrI GCNGC 5 cut(s) 79, 196, 1701, 2098, 2338
PleI GAGTC 6 cut(s) 831, 1437, 1646, 1695, 1724, 2183
PpsI GAGTC 6 cut(s) 831, 1437, 1646, 1695, 1724, 2183
PshBI ATTAAT 1 cut(s) 1902
PsiI TTATAA 1 cut(s) 1793
Psp124BI GAGCTC 2 cut(s) 92, 294
Psp1406I AACGTT 1 cut(s) 585
Psp6I CCWGG 8 cut(s) 385, 517, 1347, 1515, 1630, 2132, 2204, 2737
PspFI CCCAGC 2 cut(s) 1983, 2387
PspGI CCWGG 8 cut(s) 385, 517, 1347, 1515, 1630, 2132, 2204, 2737
PspN4I GGNNCC 1 cut(s) 145
PspPI GGNCC 1 cut(s) 2693
PsrI GAACNNNNNNTAC 2 cut(s) 127, 159
PstNI CAGNNNCTG 1 cut(s) 1758
PsuI RGATCY 2 cut(s) 925, 2014
PsyI GACNNNGTC 1 cut(s) 187
PvuII CAGCTG 3 cut(s) 95, 194, 1983
RruI TCGCGA 1 cut(s) 1706
RsaI GTAC 8 cut(s) 136, 632, 647, 1119, 1180, 1973, 2357, 2432
RsaNI GTAC 8 cut(s) 135, 631, 646, 1118, 1179, 1972, 2356, 2431
RseI CAYNNNNRTG 4 cut(s) 67, 549, 1632, 1857
SacI GAGCTC 2 cut(s) 92, 294
SapI GCTCTTC 2 cut(s) 723, 2277
SaqAI TTAA 9 cut(s) 105, 375, 486, 1004, 1056, 1101, 1122, 1577, 1902
SatI GCNGC 5 cut(s) 78, 195, 1700, 2097, 2337
Sau96I GGNCC 1 cut(s) 2693
SchI GAGTC 6 cut(s) 832, 1437, 1647, 1696, 1724, 2183
SduI GDGCHC 4 cut(s) 92, 215, 294, 944
SfaNI GCATC 4 cut(s) 317, 1497, 1855, 2694
SinI GGWCC 1 cut(s) 2693
SmiMI CAYNNNNRTG 4 cut(s) 67, 549, 1632, 1857
SmlI CTYRAG 3 cut(s) 742, 1251, 2441
SmoI CTYRAG 3 cut(s) 742, 1251, 2441
SpeI ACTAGT 1 cut(s) 1649
SsiI CCGC 7 cut(s) 358, 420, 1358, 1775, 2068, 2383, 2401
SstI GAGCTC 2 cut(s) 92, 294
StyI CCWWGG 5 cut(s) 1675, 1950, 2010, 2255, 2500
TaiI ACGT 2 cut(s) 588, 1342
TaqI TCGA 2 cut(s) 318, 689
TaqII GACCGA 1 cut(s) 1392
TatI WGTACW 3 cut(s) 645, 1117, 1971
TfiI GAWTC 6 cut(s) 280, 397, 1499, 1894, 2045, 2294
Tru1I TTAA 9 cut(s) 105, 375, 486, 1004, 1056, 1101, 1122, 1577, 1902
Tru9I TTAA 9 cut(s) 105, 375, 486, 1004, 1056, 1101, 1122, 1577, 1902
TscAI CASTG 9 cut(s) 373, 385, 556, 940, 1251, 1509, 1763, 1887, 2773
TseFI GTSAC 5 cut(s) 736, 998, 1688, 1859, 2650
TseI GCWGC 5 cut(s) 77, 194, 1699, 2096, 2336
Tsp45I GTSAC 5 cut(s) 736, 998, 1688, 1859, 2650
TspGWI ACGGA 4 cut(s) 57, 122, 1170, 1656
TspRI CASTG 9 cut(s) 373, 385, 556, 940, 1251, 1509, 1763, 1887, 2773
Tth111I GACNNNGTC 1 cut(s) 187
Van91I CCANNNNNTGG 3 cut(s) 1631, 1956, 2313
VpaK11BI GGWCC 1 cut(s) 2693
VspI ATTAAT 1 cut(s) 1902
XagI CCTNNNNNAGG 3 cut(s) 891, 2364, 2415
XapI RAATTY 5 cut(s) 446, 992, 1352, 2614, 2757
XmiI GTMKAC 2 cut(s) 869, 1659
XmnI GAANNNNTTC 1 cut(s) 2178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.