RchiOBHm_Chr3g0455121

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000763
Physical Location & Seq
Forward (+)
4979448 .. 4983533
4086 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42209

Sequence Viewer

Length: 2784 bp
ATGCTTCATTTCAAGTGTCATCATACTCCTCCTCTCAACTTGATCAGAACCAAACCTCCTCCTCCATCTCCGTGTGGAGCAGCTCGCCTGAGCTCAGCTGTTGCAGTTAATAGCAGACCACTAGCGCTCTTATTCCGTTCTGCTGGGTCCTTGTTCATGGCCAATGTGAGACGATCTCGGCCGCTGACTGTGTCAGCTGCCAAGTCTTCCCAGAGCACCACCACCATTGATCCTCCAAGTGATGACACCAAGATCAAAGGGACTGTGGTTTTGATGAAGAAGAATCTTCTGGAGCTCAACGACCTCACAGCATCTGTCACCGACCGTGTTCATGAGCTTTTCGGGAAATCTGTTTCTCTCCGGCTCATCAGTGCTGTTAACACCGGCCCTGGAAATGGGAATCAAGGAAAAATTGGGAAGCCCGCTTATTTGGAGAATTGGATCACCAAATTTACTCCCTTGACAGCAGAAGAGTGTGCGTTTGAGGTTAATTTTGATTGGGATGAGAAGATTGGAGTTCCAGGAGCTTTCATCATAAGAAATGAACATGGCAGTGAGTTTTACTTGAAATCCCTCACACTCGGAAACGTTCCCGGAGAAGGAAAAGTCCACTTTGATTGCAACTCATGGGTGTACCCTGCTCACAAGTACAAGAAAGACCGTGTTTTCTTCACTAACAAGACATATCTTTCGAGTGAGACGCCTGTTGGACTAAAGAAATTTAGAGAAGAAGAGCTAGTGACCTTGAGAGGTGATGGTGTTGAAAAGGGAAAGCTTCAGACATGGGACAGGGTTTATGACTATGCAACCTACAATGATTTGGGGAGTCCAGATAAGGGTGAAAAATATGCTCGCCCAATTCTCGGAGGGTCTACCAAGTTCCCTTATCCTAGAAGAGGAAGAACTGGAAGACCAGCAACCAAGAAAGATCCCAACAGTGAGAGCCCTCTGCCTCTTATTGAGAGCTTATTTATATATGTTCCAAGAGACGAAAGATTTGGTCACTTAAAGATGTCAGACTTGATTGCATATGCCCTGAAATCCATATCTCAGATACTTAAACCTGATGAGCTAGCTACTCTACTTGGCCATCAAAAAGAGTTTAACAGCTTGGAAGATGTACTTAAACTCTATGAAGGAGGATTAGAGTTGCCAAACGGATTGTTGAAGTTTGTTAGGAGTACCACCCCTGCTGAGACGGTCAAGGAACTTTTCCGAACTGATGGTGAAGGATTACTAAAGTTTCCAGTGCCTCAAGTGATCAAAGAGGATAAGTCGGCATGGAGAACTGATGAGGAGTTTGCAAGAGAAATGTTGGCTGGTCTAAACCCTGTCAGCATACGTCGTCTCCAGGAATTTCCACCAGCTAGCAAGCTAGACCAAAGTGTATATGGAGATCAAACCAGTAAAATAACCAAAGAACACATAGCAGATAAATTAGATGGACTCAGCATAGATGAGGCAATCAACAAGAACAAGCTATTCATACTCGACCACCATGATTCACTGATGCCTTACCTGGAGCGTATAAACTTAACTGATTTGGTAAAAGGTTATGCAAGCAGGACACTCCTTTTCTTAACAAATGATGGGACTTTGAAGCCAATAGCTATTGAACTGAGCTTGCCACATCCTGGTGGAGTCGGTTGCACTAGTGAAGTCTACACTCCGTCTAGCCAAGGCGTTGAGAGTCACATTTGGCAGCTCGCGAAAGCTTATGTAGCTATAAACGACTCAGGCTATCATCAGCTTGTCAGCCACTGGTTGAGAACTCATGCGGTGATTGAGCCAGTTATAATAGCAACAAACAGGCAGTTGAGCGTGCTTCACCCGATTCACAAGCTTCTGCATCCTCACTTTCGTGACACTATGAATGTAAACGCAGTAGCGCGACAGATTCTCATTAATGCTGGTGGAGTGCTAGAGAACACAGTCTTTCCTGCAAAGTATTCCATGGAATGGTCATCTGTTATGTACAAGGACAGCTGGGTTTTTCCTGAACAAGCACTCCCCAAGGATCTGATCAAAAGAGGAATGGCAGTTGAGGATTCAAGTGCCTCACACGGTGTGCGGTTACTAATAGAGGACTATCCATATGCTGCTGATGGGCTTGAAATCTGGTCTGCAATCAAAACATGGGTGGAAGAGTATTGCTCCTTCTACTTCAAAACTGATGAAATGGTTCAAAAGGACTCGGAGCTCCAGTCCTGGTGGAAGGAACTCCGAGAAGAGGGTCATGGCGACAAGAAAGATGAGCCTTGGTGGCCTAAAATGCAGACTGTTGAAGAGCTGATAGAATCATGCACCATCATCATATGGACTGCTTCAGCTTACCATGCTGCAATCAATTTCGGGCAGTACCCTTATGGAGGATACCCTGCAAACCGCCCCAGCATAAGCCGGCGGTTCATGCCTAAGGAAGGCACTCCTGAGTACGAGCAACTCAAGAACAACCCTGAAAAGGCTTTCTTGGAAACAGTTACTCCTCAGCTTCAGACCCTCCTTGGCATGGCCTCCATTGAGATACTGTCAAGGCACTCGGCTGATGAGATTTACTTGGGGGAGAGAGACAGTCAAGAATGGACAACAGACACACCAGTCTTGCAAGCATTTGAGAATTTCAGAAACAAGCTCAAAGCAGTTGAGGAAAGAGTGACAAAGATGAACAAGGATGACAAGTTGAAGAACCGGACCGGACCGGCCAAGATGCCTTACACTCTGCTCTATCCTACCAGCGAACCTGGACTTACCGGCAAGGGAATTCCCAACAGTGTCTCAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00591 map00591
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

927

Amino Acids

104.34

Weight (kDa)

6.82

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 123 - 224 9.7e-19 PLAT/LH2 domain
Lipoxygenase PF00305 237 - 910 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1796
AasI GACNNNNNNGTC 1 cut(s) 2597
AccB7I CCANNNNNTGG 2 cut(s) 1634, 1959
AccI GTMKAC 2 cut(s) 872, 1662
AccII CGCG 2 cut(s) 1709, 1891
AciI CCGC 6 cut(s) 182, 423, 1778, 2071, 2386, 2404
AclI AACGTT 1 cut(s) 588
AclWI GGATC 4 cut(s) 224, 449, 923, 2025
AcoI YGGCCR 4 cut(s) 159, 179, 1087, 2700
AcsI RAATTY 5 cut(s) 449, 719, 1355, 2617, 2760
AcuI CTGAAG 3 cut(s) 761, 2310, 2477
AcyI GRCGYC 1 cut(s) 701
AdeI CACNNNGTG 2 cut(s) 2066, 2068
AfaI GTAC 7 cut(s) 635, 650, 1122, 1183, 1976, 2360, 2435
AfeI AGCGCT 1 cut(s) 126
AhlI ACTAGT 1 cut(s) 1652
AjnI CCWGG 7 cut(s) 388, 520, 1350, 1518, 1633, 2207, 2740
AleI CACNNNNGTG 1 cut(s) 1860
AloI GAACNNNNNNTCC 4 cut(s) 40, 72, 1992, 2024
Alw21I GWGCWC 4 cut(s) 95, 218, 297, 2202
Alw26I GTCTC 7 cut(s) 163, 692, 981, 1190, 1352, 2562, 2779
AlwI GGATC 4 cut(s) 224, 449, 923, 2025
AlwNI CAGNNNCTG 2 cut(s) 314, 1761
Aor51HI AGCGCT 1 cut(s) 126
AoxI GGCC 7 cut(s) 159, 179, 385, 1087, 2264, 2511, 2700
ApeKI GCWGC 5 cut(s) 80, 197, 1702, 2099, 2339
ApoI RAATTY 5 cut(s) 449, 719, 1355, 2617, 2760
ArsI GACNNNNNNTTYG 6 cut(s) 253, 285, 673, 705, 980, 1012
AseI ATTAAT 1 cut(s) 1905
Asp700I GAANNNNTTC 1 cut(s) 2181
AspLEI GCGC 2 cut(s) 127, 1891
AspS9I GGNCC 4 cut(s) 147, 386, 2691, 2696
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 7 cut(s) 310, 436, 764, 851, 1238, 1792, 1820
AsuNHI GCTAGC 2 cut(s) 1072, 1367
AvaII GGWCC 3 cut(s) 147, 2691, 2696
AxyI CCTNAGG 1 cut(s) 2415
BalI TGGCCA 2 cut(s) 161, 1089
BanII GRGCYC 4 cut(s) 95, 297, 947, 2202
BarI GAAGNNNNNNTAC 2 cut(s) 2141, 2173
BbsI GAAGAC 2 cut(s) 198, 916
Bbv12I GWGCWC 4 cut(s) 95, 218, 297, 2202
BbvCI CCTCAGC 1 cut(s) 2487
BbvI GCAGC 5 cut(s) 92, 184, 1714, 2086, 2326
BccI CCATC 8 cut(s) 73, 749, 1098, 1217, 1436, 1583, 2099, 2315
BciT130I CCWGG 7 cut(s) 390, 522, 1352, 1520, 1635, 2209, 2742
BciVI GTATCC 1 cut(s) 2366
BclI TGATCA 3 cut(s) 42, 1260, 2022
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 7 cut(s) 163, 692, 981, 1190, 1352, 2562, 2779
BcuI ACTAGT 1 cut(s) 1652
BfaI CTAG 9 cut(s) 122, 737, 891, 1073, 1368, 1376, 1653, 1674, 1922
BfoI RGCGCY 1 cut(s) 128
BfuI GTATCC 1 cut(s) 2366
BglI GCCNNNNNGGC 1 cut(s) 2263
BisI GCNGC 6 cut(s) 81, 182, 198, 1703, 2100, 2340
BlpI GCTNAGC 1 cut(s) 94
BlsI GCNGC 6 cut(s) 82, 183, 199, 1704, 2101, 2341
Bme1390I CCNGG 8 cut(s) 390, 522, 594, 1352, 1520, 1635, 2209, 2742
Bme18I GGWCC 3 cut(s) 147, 2691, 2696
BmgT120I GGNCC 4 cut(s) 147, 386, 2691, 2696
BmiI GGNNCC 1 cut(s) 148
BmrFI CCNGG 8 cut(s) 390, 522, 594, 1352, 1520, 1635, 2209, 2742
BmsI GCATC 4 cut(s) 320, 1500, 1858, 2697
BmtI GCTAGC 2 cut(s) 1076, 1371
BpiI GAAGAC 2 cut(s) 198, 916
BplI GAGNNNNNCTC 4 cut(s) 160, 192, 2138, 2170
BpmI CTGGAG 4 cut(s) 311, 1334, 1541, 2186
Bpu10I CCTNAGC 2 cut(s) 89, 2487
Bpu1102I GCTNAGC 1 cut(s) 94
BpuEI CTTGAG 3 cut(s) 766, 1239, 2429
BpuMI CCSGG 1 cut(s) 594
BsaHI GRCGYC 1 cut(s) 701
BsaJI CCNNGG 6 cut(s) 388, 1678, 1953, 2013, 2258, 2503
BsaWI WCCGGW 2 cut(s) 2688, 2693
Bse118I RCCGGY 4 cut(s) 383, 2400, 2698, 2750
Bse1I ACTGG 7 cut(s) 910, 1247, 1404, 1766, 1790, 2203, 2597
Bse21I CCTNAGG 1 cut(s) 2415
BseBI CCWGG 7 cut(s) 390, 522, 1352, 1520, 1635, 2209, 2742
BseDI CCNNGG 6 cut(s) 388, 1678, 1953, 2013, 2258, 2503
BseGI GGATG 4 cut(s) 508, 1630, 1849, 2677
BseMII CTCAG 9 cut(s) 80, 108, 1064, 1185, 1462, 1610, 1749, 2421, 2501
BseNI ACTGG 7 cut(s) 910, 1247, 1404, 1766, 1790, 2203, 2597
BseRI GAGGAG 6 cut(s) 18, 21, 48, 51, 1310, 2475
BseX3I CGGCCG 1 cut(s) 179
BseXI GCAGC 5 cut(s) 92, 184, 1714, 2086, 2326
BseYI CCCAGC 3 cut(s) 143, 1986, 2390
Bsh1236I CGCG 2 cut(s) 1709, 1891
Bsh1285I CGRYCG 2 cut(s) 182, 325
BshFI GGCC 7 cut(s) 161, 181, 387, 1089, 2266, 2513, 2702
BsiEI CGRYCG 2 cut(s) 182, 325
BsiHKAI GWGCWC 4 cut(s) 95, 218, 297, 2202
BsiSI CCGG 8 cut(s) 361, 384, 594, 2401, 2689, 2694, 2699, 2751
BslFI GGGAC 3 cut(s) 274, 800, 1606
BsmAI GTCTC 7 cut(s) 163, 692, 981, 1190, 1352, 2562, 2779
BsmBI CGTCTC 5 cut(s) 163, 692, 981, 1190, 1352
BsmFI GGGAC 3 cut(s) 274, 800, 1606
BsnI GGCC 7 cut(s) 161, 181, 387, 1089, 2266, 2513, 2702
Bsp1286I GDGCHC 5 cut(s) 95, 218, 297, 947, 2202
Bsp1407I TGTACA 1 cut(s) 1974
Bsp1720I GCTNAGC 1 cut(s) 94
Bsp19I CCATGG 1 cut(s) 1953
Bsp68I TCGCGA 1 cut(s) 1709
BspACI CCGC 6 cut(s) 182, 423, 1778, 2071, 2386, 2404
BspANI GGCC 7 cut(s) 161, 181, 387, 1089, 2266, 2513, 2702
BspCNI CTCAG 9 cut(s) 81, 107, 1063, 1186, 1461, 1611, 1748, 2422, 2500
BspFNI CGCG 2 cut(s) 1709, 1891
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 1 cut(s) 148
BspOI GCTAGC 2 cut(s) 1076, 1371
BspPI GGATC 4 cut(s) 224, 449, 923, 2025
BspQI GCTCTTC 2 cut(s) 726, 2280
BsrFI RCCGGY 4 cut(s) 383, 2400, 2698, 2750
BsrGI TGTACA 1 cut(s) 1974
BsrI ACTGG 7 cut(s) 910, 1247, 1404, 1766, 1790, 2203, 2597
BssAI RCCGGY 4 cut(s) 383, 2400, 2698, 2750
BssECI CCNNGG 6 cut(s) 388, 1678, 1953, 2013, 2258, 2503
BssNI GRCGYC 1 cut(s) 701
BssT1I CCWWGG 5 cut(s) 1678, 1953, 2013, 2258, 2503
Bst2UI CCWGG 7 cut(s) 390, 522, 1352, 1520, 1635, 2209, 2742
Bst6I CTCTTC 6 cut(s) 465, 726, 889, 2139, 2223, 2280
BstACI GRCGYC 1 cut(s) 701
BstAUI TGTACA 1 cut(s) 1974
BstDSI CCRYGG 1 cut(s) 1953
BstENI CCTNNNNNAGG 3 cut(s) 894, 2367, 2418
BstF5I GGATG 4 cut(s) 508, 1630, 1849, 2677
BstFNI CGCG 2 cut(s) 1709, 1891
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 2 cut(s) 127, 1891
BstMAI GTCTC 7 cut(s) 163, 692, 981, 1190, 1352, 2562, 2779
BstMCI CGRYCG 2 cut(s) 182, 325
BstMWI GCNNNNNNNGC 5 cut(s) 1721, 2263, 2272, 2336, 2410
BstNI CCWGG 7 cut(s) 390, 522, 1352, 1520, 1635, 2209, 2742
BstSCI CCNGG 8 cut(s) 388, 520, 592, 1350, 1518, 1633, 2207, 2740
BstUI CGCG 2 cut(s) 1709, 1891
BstV1I GCAGC 5 cut(s) 92, 184, 1714, 2086, 2326
BstV2I GAAGAC 2 cut(s) 198, 916
BstX2I RGATCY 2 cut(s) 928, 2017
BstYI RGATCY 2 cut(s) 928, 2017
BstZI CGGCCG 1 cut(s) 179
Bsu36I CCTNAGG 1 cut(s) 2415
BsuI GTATCC 1 cut(s) 2366
BsuRI GGCC 7 cut(s) 161, 181, 387, 1089, 2266, 2513, 2702
BtgI CCRYGG 1 cut(s) 1953
BtsCI GGATG 4 cut(s) 508, 1630, 1849, 2677
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 7 cut(s) 376, 559, 943, 1254, 1505, 1759, 2776
BtuMI TCGCGA 1 cut(s) 1709
CaiI CAGNNNCTG 2 cut(s) 314, 1761
CciI TCATGA 1 cut(s) 331
CfoI GCGC 2 cut(s) 127, 1891
Cfr10I RCCGGY 4 cut(s) 383, 2400, 2698, 2750
Cfr13I GGNCC 4 cut(s) 147, 386, 2691, 2696
CpoI CGGWCCG 2 cut(s) 2691, 2696
CseI GACGC 1 cut(s) 709
Csp6I GTAC 7 cut(s) 634, 649, 1121, 1182, 1975, 2359, 2434
CspCI CAANNNNNGTGG 4 cut(s) 208, 243, 599, 634
CspI CGGWCCG 2 cut(s) 2691, 2696
CviQI GTAC 7 cut(s) 634, 649, 1121, 1182, 1975, 2359, 2434
DraIII CACNNNGTG 2 cut(s) 2066, 2068
DrdI GACNNNNNNGTC 1 cut(s) 2597
DseDI GACNNNNNNGTC 1 cut(s) 2597
EaeI YGGCCR 4 cut(s) 159, 179, 1087, 2700
EagI CGGCCG 1 cut(s) 179
Eam1104I CTCTTC 6 cut(s) 465, 726, 889, 2139, 2223, 2280
EarI CTCTTC 6 cut(s) 465, 726, 889, 2139, 2223, 2280
Ecl136II GAGCTC 3 cut(s) 93, 295, 2200
EclXI CGGCCG 1 cut(s) 179
Eco130I CCWWGG 5 cut(s) 1678, 1953, 2013, 2258, 2503
Eco24I GRGCYC 4 cut(s) 95, 297, 947, 2202
Eco47I GGWCC 3 cut(s) 147, 2691, 2696
Eco47III AGCGCT 1 cut(s) 126
Eco52I CGGCCG 1 cut(s) 179
Eco53kI GAGCTC 3 cut(s) 93, 295, 2200
Eco57I CTGAAG 3 cut(s) 761, 2310, 2477
Eco81I CCTNAGG 1 cut(s) 2415
EcoICRI GAGCTC 3 cut(s) 93, 295, 2200
EcoNI CCTNNNNNAGG 3 cut(s) 894, 2367, 2418
EcoO109I RGGNCCY 1 cut(s) 147
EcoRI GAATTC 1 cut(s) 2760
EcoRII CCWGG 7 cut(s) 388, 520, 1350, 1518, 1633, 2207, 2740
EcoT14I CCWWGG 5 cut(s) 1678, 1953, 2013, 2258, 2503
EcoT38I GRGCYC 4 cut(s) 95, 297, 947, 2202
ErhI CCWWGG 5 cut(s) 1678, 1953, 2013, 2258, 2503
Esp3I CGTCTC 5 cut(s) 163, 692, 981, 1190, 1352
FalI AAGNNNNNCTT 4 cut(s) 1107, 1139, 2453, 2485
FaqI GGGAC 3 cut(s) 274, 800, 1606
FauI CCCGC 1 cut(s) 430
FauNDI CATATG 3 cut(s) 1030, 2095, 2315
FbaI TGATCA 3 cut(s) 42, 1260, 2022
FblI GTMKAC 2 cut(s) 872, 1662
Fnu4HI GCNGC 6 cut(s) 81, 182, 198, 1703, 2100, 2340
FokI GGATG 4 cut(s) 515, 1617, 1836, 2684
FriOI GRGCYC 4 cut(s) 95, 297, 947, 2202
Fsp4HI GCNGC 6 cut(s) 81, 182, 198, 1703, 2100, 2340
FspBI CTAG 9 cut(s) 122, 737, 891, 1073, 1368, 1376, 1653, 1674, 1922
GlaI GCGC 2 cut(s) 126, 1890
GluI GCNGC 6 cut(s) 81, 182, 198, 1703, 2100, 2340
GsaI CCCAGC 3 cut(s) 147, 1990, 2394
GsuI CTGGAG 4 cut(s) 311, 1334, 1541, 2186
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 7 cut(s) 161, 181, 387, 1089, 2266, 2513, 2702
HapII CCGG 8 cut(s) 361, 384, 594, 2401, 2689, 2694, 2699, 2751
HgaI GACGC 1 cut(s) 709
HhaI GCGC 2 cut(s) 127, 1891
Hin1I GRCGYC 1 cut(s) 701
Hin6I GCGC 2 cut(s) 125, 1889
HinP1I GCGC 2 cut(s) 125, 1889
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HindIII AAGCTT 3 cut(s) 773, 1713, 1841
HpaI GTTAAC 1 cut(s) 379
HpaII CCGG 8 cut(s) 361, 384, 594, 2401, 2689, 2694, 2699, 2751
HphI GGTGA 7 cut(s) 310, 436, 764, 851, 1238, 1792, 1820
Hpy166II GTNNAC 6 cut(s) 379, 610, 634, 873, 1663, 1879
Hpy8I GTNNAC 6 cut(s) 379, 610, 634, 873, 1663, 1879
Hpy99I CGWCG 1 cut(s) 1347
HpyAV CCTTC 6 cut(s) 593, 1130, 1223, 2167, 2209, 2414
HpyCH4IV ACGT 2 cut(s) 588, 1342
HpyF10VI GCNNNNNNNGC 5 cut(s) 1721, 2263, 2272, 2336, 2410
HpySE526I ACGT 2 cut(s) 588, 1342
Hsp92I GRCGYC 1 cut(s) 701
HspAI GCGC 2 cut(s) 125, 1889
KroI GCCGGC 1 cut(s) 2400
KroNI GCCGGC 1 cut(s) 2402
Ksp22I TGATCA 3 cut(s) 42, 1260, 2022
KspAI GTTAAC 1 cut(s) 379
LguI GCTCTTC 2 cut(s) 726, 2280
LmnI GCTCC 7 cut(s) 77, 292, 524, 1522, 2159, 2197, 2205
Lsp1109I GCAGC 5 cut(s) 92, 184, 1714, 2086, 2326
LweI GCATC 4 cut(s) 320, 1500, 1858, 2697
MaeI CTAG 9 cut(s) 122, 737, 891, 1073, 1368, 1376, 1653, 1674, 1922
MaeII ACGT 2 cut(s) 588, 1342
MaeIII GTNAC 8 cut(s) 316, 739, 1001, 1691, 1862, 2073, 2479, 2653
MflI RGATCY 2 cut(s) 928, 2017
MhlI GDGCHC 5 cut(s) 95, 218, 297, 947, 2202
MlsI TGGCCA 2 cut(s) 161, 1089
MluNI TGGCCA 2 cut(s) 161, 1089
MlyI GAGTC 6 cut(s) 835, 1440, 1650, 1699, 1727, 2186
MmeI TCCRAC 1 cut(s) 688
Mox20I TGGCCA 2 cut(s) 161, 1089
MroNI GCCGGC 1 cut(s) 2400
MroXI GAANNNNTTC 1 cut(s) 2181
MscI TGGCCA 2 cut(s) 161, 1089
MslI CAYNNNNRTG 4 cut(s) 70, 552, 1635, 1860
Msp20I TGGCCA 2 cut(s) 161, 1089
MspA1I CMGCKG 4 cut(s) 98, 184, 197, 1986
MspI CCGG 8 cut(s) 361, 384, 594, 2401, 2689, 2694, 2699, 2751
MspR9I CCNGG 8 cut(s) 390, 522, 594, 1352, 1520, 1635, 2209, 2742
MvaI CCWGG 7 cut(s) 390, 522, 1352, 1520, 1635, 2209, 2742
MvnI CGCG 2 cut(s) 1709, 1891
MwoI GCNNNNNNNGC 5 cut(s) 1721, 2263, 2272, 2336, 2410
NaeI GCCGGC 1 cut(s) 2402
NciI CCSGG 1 cut(s) 594
NcoI CCATGG 1 cut(s) 1953
NdeI CATATG 3 cut(s) 1030, 2095, 2315
NgoMIV GCCGGC 1 cut(s) 2400
NheI GCTAGC 2 cut(s) 1072, 1367
NlaIV GGNNCC 1 cut(s) 148
NmeAIII GCCGAG 2 cut(s) 157, 2519
NmuCI GTSAC 6 cut(s) 316, 739, 1001, 1691, 1862, 2653
NruI TCGCGA 1 cut(s) 1709
OliI CACNNNNGTG 1 cut(s) 1860
PagI TCATGA 1 cut(s) 331
PciSI GCTCTTC 2 cut(s) 726, 2280
PdiI GCCGGC 1 cut(s) 2402
PdmI GAANNNNTTC 1 cut(s) 2181
PfeI GAWTC 7 cut(s) 283, 400, 1502, 1834, 1897, 2048, 2297
PflFI GACNNNGTC 1 cut(s) 190
PflMI CCANNNNNTGG 2 cut(s) 1634, 1959
PfoI TCCNGGA 3 cut(s) 520, 592, 1350
PkrI GCNGC 6 cut(s) 82, 183, 199, 1704, 2101, 2341
PleI GAGTC 6 cut(s) 834, 1440, 1649, 1698, 1727, 2186
PpsI GAGTC 6 cut(s) 834, 1440, 1649, 1698, 1727, 2186
PpuMI RGGWCCY 1 cut(s) 147
PshBI ATTAAT 1 cut(s) 1905
PsiI TTATAA 1 cut(s) 1796
Psp124BI GAGCTC 3 cut(s) 95, 297, 2202
Psp1406I AACGTT 1 cut(s) 588
Psp5II RGGWCCY 1 cut(s) 147
Psp6I CCWGG 7 cut(s) 388, 520, 1350, 1518, 1633, 2207, 2740
PspFI CCCAGC 3 cut(s) 143, 1986, 2390
PspGI CCWGG 7 cut(s) 388, 520, 1350, 1518, 1633, 2207, 2740
PspN4I GGNNCC 1 cut(s) 148
PspPI GGNCC 4 cut(s) 147, 386, 2691, 2696
PspPPI RGGWCCY 1 cut(s) 147
PstNI CAGNNNCTG 2 cut(s) 314, 1761
PsuI RGATCY 2 cut(s) 928, 2017
PsyI GACNNNGTC 1 cut(s) 190
PvuII CAGCTG 3 cut(s) 98, 197, 1986
RruI TCGCGA 1 cut(s) 1709
RsaI GTAC 7 cut(s) 635, 650, 1122, 1183, 1976, 2360, 2435
RsaNI GTAC 7 cut(s) 634, 649, 1121, 1182, 1975, 2359, 2434
RseI CAYNNNNRTG 4 cut(s) 70, 552, 1635, 1860
Rsr2I CGGWCCG 2 cut(s) 2691, 2696
RsrII CGGWCCG 2 cut(s) 2691, 2696
SacI GAGCTC 3 cut(s) 95, 297, 2202
SapI GCTCTTC 2 cut(s) 726, 2280
SatI GCNGC 6 cut(s) 81, 182, 198, 1703, 2100, 2340
Sau96I GGNCC 4 cut(s) 147, 386, 2691, 2696
SchI GAGTC 6 cut(s) 835, 1440, 1650, 1699, 1727, 2186
ScrFI CCNGG 8 cut(s) 390, 522, 594, 1352, 1520, 1635, 2209, 2742
SduI GDGCHC 5 cut(s) 95, 218, 297, 947, 2202
SfaNI GCATC 4 cut(s) 320, 1500, 1858, 2697
SinI GGWCC 3 cut(s) 147, 2691, 2696
SmiMI CAYNNNNRTG 4 cut(s) 70, 552, 1635, 1860
SmlI CTYRAG 3 cut(s) 745, 1254, 2444
SmoI CTYRAG 3 cut(s) 745, 1254, 2444
SpeI ACTAGT 1 cut(s) 1652
SsiI CCGC 6 cut(s) 182, 423, 1778, 2071, 2386, 2404
SspMI CTAG 9 cut(s) 122, 737, 891, 1073, 1368, 1376, 1653, 1674, 1922
SstI GAGCTC 3 cut(s) 95, 297, 2202
StyD4I CCNGG 8 cut(s) 388, 520, 592, 1350, 1518, 1633, 2207, 2740
StyI CCWWGG 5 cut(s) 1678, 1953, 2013, 2258, 2503
TaiI ACGT 2 cut(s) 591, 1345
TaqI TCGA 2 cut(s) 692, 1491
TatI WGTACW 3 cut(s) 648, 1120, 1974
TauI GCSGC 1 cut(s) 184
TfiI GAWTC 7 cut(s) 283, 400, 1502, 1834, 1897, 2048, 2297
TscAI CASTG 7 cut(s) 376, 559, 943, 1254, 1512, 1766, 2776
TseFI GTSAC 6 cut(s) 316, 739, 1001, 1691, 1862, 2653
TseI GCWGC 5 cut(s) 80, 197, 1702, 2099, 2339
Tsp45I GTSAC 6 cut(s) 316, 739, 1001, 1691, 1862, 2653
TspGWI ACGGA 4 cut(s) 60, 125, 1173, 1659
TspRI CASTG 7 cut(s) 376, 559, 943, 1254, 1512, 1766, 2776
Tth111I GACNNNGTC 1 cut(s) 190
Van91I CCANNNNNTGG 2 cut(s) 1634, 1959
VpaK11BI GGWCC 3 cut(s) 147, 2691, 2696
VspI ATTAAT 1 cut(s) 1905
XagI CCTNNNNNAGG 3 cut(s) 894, 2367, 2418
XapI RAATTY 5 cut(s) 449, 719, 1355, 2617, 2760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1388
XmiI GTMKAC 2 cut(s) 872, 1662
XmnI GAANNNNTTC 1 cut(s) 2181
XspI CTAG 9 cut(s) 122, 737, 891, 1073, 1368, 1376, 1653, 1674, 1922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.