Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000763

Physical Location & Seq

Genomic Coordinates Reverse (-)

4743415 .. 4750857

Gene Structure 7443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1069500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGAAATTGCTCAGGGTCGAGGGTCGAGGGTTGAGGGTCGAGGACAATGGATTGAAGGGGAATCTTGGAAAACAAGCATATCTGGAAGACTGGATTACCACAATTACACCGTTAACAGCAGGAGAGTCTGCATTCAAGGTTACCTTTGACTGGGAAGAGGAAGTAGGAGTCCCAGGAGCATTCATAATACAAAACAATCATCATAGTGAGTTCTTCCTCAAGACTGTCACACTCGATAATGTCCCCGATGAGGGCCGTGTCCACTTTGTTTGCAATTCATGGGTTTACCCGGCCGAAAAATACACCAAAGACCGTGTTTTCTTCGCTAACAAGACTTATCTTCCAAGCGAAGTACCATTGCCGTTGCGCAAATACATAGAAGAAGAACTAGTAGAATTAAGAGGAGATGGAAAAGGAAAGCTCGAAGAGTGGGATAGAGTCTATGACTATGCTTACTACAATGATCTGGGAGATCCTGATAAGGGTTCGGAATATGTCCGCCCAATTATGGGAGGGTCTACTGAGTACCCTTACCCTCGCAGGGGCAGAACTGGCCGACCACCAAAAGAGACGGATCCTAACACCGAGAGTAGGTTACCGATTGTTTCAAGCTTAAGCATATATGTGCCAAGGGATGAACGGTTTGGACACTTGAAGATGTCCGACTTCCTTGCATATGCACTGAAATCTATAGCTCAGTTTATTAGACCAGAGATAGAAGCCTTGTTTGATAAAACTCCTAACGAGTTTGACAGCTTCAAAGATGTGCTTCAACTCTACGAAGGAGGAATTCCGTTGCCTGAAGGTTTATTCAAGGAAATCGGTGACAGCATACCTGCGGAAATGCTCAAGGAAATTTTCCGAACTGATGGTGCACAGTTCCTCCGATTCCCAATGCCTGAAGTGATCAAAGTGGACAAGACTGCTTGGAGGACTGATGAAGAATTTGCCAGAGAAATGCTGGCTGGAGTGAATCCTGTCAACATTCGCCTTCTTCAAGAATTCCCGCCAGCAAGCAAGCTAGACCCAAAAGTTTACGGTGATCAAACCAGTACAATAACCGAACAACATATAAGGAATAACTTGGATGGACTAACAGTGGATGAGGCACTCAAGAACAAAAAGCTATTCATATTAGATCATCACGATGCATTGATGCCGTACCTGAGGAGGATAAACTCAACTTCCAACAAGATCTATGGTAGCAGAACTCTCCTGTTCTTGAAAAGTGATGGAACTTTGAAGATATTAGTGATCGAATTAAGCTTGCCTCATCCCGACGGAGATCAATATGGTTGCATTAGTAATGTTTACACACCAGCTGAACAAGGTGTAGAAAGCTCCATATGGCAACTGGCTAAAGCTTATGTGGCCGTAAACGACTCTGGAAATCATCAACTTATCAGTCACTGGTTAAACACCCATGCGGTGATTGAGCCGGTTATAATAGCTGCGAATAGGCAGCTAAGCGTGGTTCATCCAATTTACAAACTTCTGCAGCCTCATTTCCGCGATACCATGTACATCAATGCAATTGGCAGGGGAATCCTCCTTAATGCTCGCGGAGTTATAGAGTCGACAGTTTTTCCAGCTAGGTATGCCTTGGGGTTGTCATCAGCTGTTTATAAAGATTGGATTTTTCCTGAGCAAGCTCTCCCTGCAGATCTCATCAAGAGAGGCGTGGCAGTCAAGGATGAAAATTCTCCACACGGTCTTCGCCTACTGATAGAGGATTATCCATATGCTGTTGATGGGATTGAAATCTGGTTTGCAATAAAAACTTGGGTCGAAGACTATTGCGCTTTCTACTACAAGACCAATGAAATAATTCAGACAGACGTCGAGCTCCAATCCTGGTGGAAGGAGCTCGTAGAGGAGGGTCATGGGGACATAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTTTTGAAGAGCTAGTTGAAACTTGCACTATCCTCATATGGACTGCTTCTGCTCTTCATGCAGCCCTCAACTTCGGACAGTTCTCTTACGCAGGATACCTTCCCAACCGCCCAACCATAAGCCGAAAATTCATGCCTGAGAAGGGAACTCCTGAATACGAAGAGCTGGAGGCCAGCCCTGATACCGTTTTCTTGAAAACAATTACTGCTCAGCTGCAGACTGTACTTGGTATTGCCACCATTGAGATTTTGTCAAGGCATTCCACTGATGAAGTGTATTTAGGGCAGAGAGACACTCCTGACTGGACATCGGACACAGCTGCATTGGAAGCTTTCGATAAATTCGGAAAGAAACTGGCTGAAATCGAGGATCGAATTACAAGTATGAACAATGATGAGAAACTGAAGAACCGAGTTGGATCAGTCAAGATTCCGTACACTTTGCTCTTTCCTACTAGTGAAGGTGGAATTACTGGCAAGGGAATTCCCAACAGCGTCTCTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0044424 GO:0044464 GO:0051213 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

810

Amino Acids

91.92

Weight (kDa)

5.14

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	16 - 108	1.2e-22	PLAT/LH2 domain
Lipoxygenase	PF00305	122 - 792	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55020
fragaria_vesca	FvH4_4g09530 FvH4_6g06090 FvH4_6g06090 FvH4_6g06090 FvH4_6g06100
malus_domestica	MD04G1204000.v1.1 MD04G1204100.v1.1 MD04G1204200.v1.1 MD04G1204500.v1.1 MD04G1204600.v1.1 MD09G1069500.v1.1 MD12G1218000.v1.1 MD12G1218200.v1.1 MD12G1218300.v1.1
prunus_persica	Prupe.6G324100_v2.0.a1 Prupe.6G324100_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324300_v2.0.a1 Prupe.6G324400_v2.0.a1 Prupe.6G324600_v2.0.a1 Prupe.6G324600_v2.0.a1
pyrus_communis	pycom04g18050 pycom04g18060 pycom12433g00060 pycom12g20350 pycom12g20380 pycom12g20390
rosa_chinensis	RchiOBHm_Chr3g0455091 RchiOBHm_Chr3g0455111 RchiOBHm_Chr3g0455121 RchiOBHm_Chr4g0404751
rosa_laevigata	RLG00000008903 RLG00000010665 RLG00000025386 RLG00000025387 RLG00000025389
rosa_multiflora	Rmu_co8490177.1_g000001 Rmu_sc0001179.1_g000031 Rmu_sc0002169.1_g000019 Rmu_sc0002169.1_g000023 Rmu_sc0002169.1_g000024 Rmu_sc0002502.1_g000004
rosa_roxburghii	Rroxscaffold_5G00348930 Rroxscaffold_6G00424550 Rroxscaffold_6G00424560 Rroxscaffold_6G00424570 Rroxscaffold_7G00160420 Rroxscaffold_7G00160500
rosa_rugosa	Rorug03G0004000 Rorug03G0004000 Rorug04G0049200
rosa_samantha	Rh3AG064600 Rh3AG064700 Rh3AG064800 Rh3BG066700 Rh3CG065100 Rh3CG065200 Rh3DG066300 Rh3DG066600 Rh3DG066700 Rh4AG124900 Rh4CG133100 Rh4DG118900
rosa_wichuraiana	Rw3G005050 Rw3G005060 Rw3G005070 Rw4G010130 Rw6G041270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1445, 1626
AatII	GACGTC	1 cut(s)	1842
Acc16I	TGCGCA	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	844
AccI	GTMKAC	2 cut(s)	518, 1577
AccII	CGCG	2 cut(s)	1512, 1563
AciI	CCGC	7 cut(s)	499, 839, 1007, 1427, 1510, 1563, 2032
AclWI	GGATC	5 cut(s)	467, 569, 582, 2301, 2350
AcoI	YGGCCR	3 cut(s)	291, 553, 1371
AcsI	RAATTY	8 cut(s)	789, 855, 944, 1001, 1699, 2051, 2264, 2406
AcuI	CTGAAG	3 cut(s)	822, 921, 2348
AcyI	GRCGYC	1 cut(s)	1839
AfaI	GTAC	7 cut(s)	354, 527, 1054, 1163, 1523, 2148, 2360
AflII	CTTAAG	1 cut(s)	613
AhlI	ACTAGT	2 cut(s)	388, 2378
AjnI	CCWGG	3 cut(s)	172, 1853, 1904
Alw21I	GWGCWC	3 cut(s)	877, 1848, 1869
Alw26I	GTCTC	3 cut(s)	563, 2208, 2425
Alw44I	GTGCAC	1 cut(s)	873
AlwI	GGATC	5 cut(s)	467, 569, 582, 2301, 2350
AlwNI	CAGNNNCTG	1 cut(s)	1410
AoxI	GGCC	6 cut(s)	253, 291, 553, 1371, 1910, 2094
ApaLI	GTGCAC	1 cut(s)	873
ApeKI	GCWGC	6 cut(s)	1451, 1462, 1498, 1985, 2137, 2243
ApoI	RAATTY	8 cut(s)	789, 855, 944, 1001, 1699, 2051, 2264, 2406
Asp700I	GAANNNNTTC	1 cut(s)	1827
AspLEI	GCGC	2 cut(s)	369, 1802
AspS9I	GGNCC	1 cut(s)	253
AsuC2I	CCSGG	1 cut(s)	290
AsuHPI	GGTGA	3 cut(s)	836, 1052, 1441
AxyI	CCTNAGG	1 cut(s)	1166
BaeGI	GKGCMC	1 cut(s)	877
BamHI	GGATCC	1 cut(s)	574
BanII	GRGCYC	3 cut(s)	1848, 1869, 1905
BbsI	GAAGAC	3 cut(s)	93, 1706, 1797
Bbv12I	GWGCWC	3 cut(s)	877, 1848, 1869
BbvI	GCAGC	6 cut(s)	1438, 1474, 1510, 1997, 2124, 2230
BccI	CCATC	5 cut(s)	401, 863, 1082, 1226, 1745
BceAI	ACGGC	4 cut(s)	240, 346, 1144, 1358
BcgI	CGANNNNNNTGC	2 cut(s)	653, 687
BciT130I	CCWGG	3 cut(s)	174, 1855, 1906
BciVI	GTATCC	1 cut(s)	2012
BclI	TGATCA	2 cut(s)	906, 1042
BcnI	CCSGG	1 cut(s)	290
BcoDI	GTCTC	3 cut(s)	563, 2208, 2425
BcuI	ACTAGT	2 cut(s)	388, 2378
BfaI	CTAG	5 cut(s)	389, 1022, 1593, 1937, 2379
BfmI	CTRYAG	4 cut(s)	690, 1496, 1659, 2138
BfrI	CTTAAG	1 cut(s)	613
BfuAI	ACCTGC	1 cut(s)	844
BfuI	GTATCC	1 cut(s)	2012
BglI	GCCNNNNNGGC	1 cut(s)	1909
BglII	AGATCT	2 cut(s)	1194, 1663
BisI	GCNGC	6 cut(s)	1452, 1463, 1499, 1986, 2138, 2244
BlpI	GCTNAGC	2 cut(s)	1466, 2133
BlsI	GCNGC	6 cut(s)	1453, 1464, 1500, 1987, 2139, 2245
Bme1390I	CCNGG	4 cut(s)	174, 290, 1855, 1906
BmgT120I	GGNCC	1 cut(s)	253
BmiI	GGNNCC	1 cut(s)	576
BmrFI	CCNGG	4 cut(s)	174, 290, 1855, 1906
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	2 cut(s)	1138, 1146
BmuI	ACTGGG	1 cut(s)	160
BoxI	GACNNNNGTC	1 cut(s)	1838
BpiI	GAAGAC	3 cut(s)	93, 1706, 1797
BplI	GAGNNNNNCTC	2 cut(s)	2203, 2235
BpmI	CTGGAG	2 cut(s)	987, 2111
Bpu10I	CCTNAGC	2 cut(s)	11, 1644
Bpu1102I	GCTNAGC	2 cut(s)	1466, 2133
BpuEI	CTTGAG	3 cut(s)	203, 833, 1097
BpuMI	CCSGG	1 cut(s)	290
BsaBI	GATNNNNATC	1 cut(s)	1760
BsaHI	GRCGYC	1 cut(s)	1839
BsaJI	CCNNGG	4 cut(s)	172, 629, 1602, 1904
BsaXI	ACNNNNNCTCC	2 cut(s)	867, 897
Bse118I	RCCGGY	1 cut(s)	1438
Bse1I	ACTGG	9 cut(s)	95, 155, 556, 1050, 1359, 1415, 2231, 2283, 2401
Bse21I	CCTNAGG	1 cut(s)	1166
Bse3DI	GCAATG	1 cut(s)	356
Bse8I	GATNNNNATC	1 cut(s)	1760
BseBI	CCWGG	3 cut(s)	174, 1855, 1906
BseDI	CCNNGG	4 cut(s)	172, 629, 1602, 1904
BseGI	GGATG	6 cut(s)	640, 1093, 1108, 1273, 1477, 1699
BseJI	GATNNNNATC	1 cut(s)	1760
BseMI	GCAATG	1 cut(s)	356
BseMII	CTCAG	7 cut(s)	25, 513, 710, 1157, 1635, 2052, 2147
BseNI	ACTGG	9 cut(s)	95, 155, 556, 1050, 1359, 1415, 2231, 2283, 2401
BseRI	GAGGAG	3 cut(s)	417, 1183, 1889
BseSI	GKGCMC	1 cut(s)	877
BseX3I	CGGCCG	1 cut(s)	291
BseXI	GCAGC	6 cut(s)	1438, 1474, 1510, 1997, 2124, 2230
Bsh1236I	CGCG	2 cut(s)	1512, 1563
Bsh1285I	CGRYCG	1 cut(s)	294
BshFI	GGCC	6 cut(s)	255, 293, 555, 1373, 1912, 2096
BsiEI	CGRYCG	1 cut(s)	294
BsiHKAI	GWGCWC	3 cut(s)	877, 1848, 1869
BsiSI	CCGG	2 cut(s)	290, 1439
BslFI	GGGAC	3 cut(s)	155, 227, 1901
BsmAI	GTCTC	3 cut(s)	563, 2208, 2425
BsmBI	CGTCTC	2 cut(s)	563, 2425
BsmFI	GGGAC	3 cut(s)	155, 227, 1901
BsmI	GAATGC	3 cut(s)	131, 179, 2182
BsnI	GGCC	6 cut(s)	255, 293, 555, 1373, 1912, 2096
Bsp1286I	GDGCHC	4 cut(s)	877, 1848, 1869, 1905
Bsp1407I	TGTACA	1 cut(s)	1521
Bsp1720I	GCTNAGC	2 cut(s)	1466, 2133
BspACI	CCGC	7 cut(s)	499, 839, 1007, 1427, 1510, 1563, 2032
BspANI	GGCC	6 cut(s)	255, 293, 555, 1373, 1912, 2096
BspCNI	CTCAG	7 cut(s)	24, 514, 709, 1158, 1636, 2053, 2146
BspFNI	CGCG	2 cut(s)	1512, 1563
BspLI	GGNNCC	1 cut(s)	576
BspMAI	CTGCAG	3 cut(s)	1500, 1663, 2142
BspMI	ACCTGC	1 cut(s)	844
BspPI	GGATC	5 cut(s)	467, 569, 582, 2301, 2350
BspQI	GCTCTTC	3 cut(s)	1926, 1983, 2079
BspTI	CTTAAG	1 cut(s)	613
BsrDI	GCAATG	1 cut(s)	356
BsrFI	RCCGGY	1 cut(s)	1438
BsrGI	TGTACA	1 cut(s)	1521
BsrI	ACTGG	9 cut(s)	95, 155, 556, 1050, 1359, 1415, 2231, 2283, 2401
BssAI	RCCGGY	1 cut(s)	1438
BssECI	CCNNGG	4 cut(s)	172, 629, 1602, 1904
BssNI	GRCGYC	1 cut(s)	1839
BssT1I	CCWWGG	2 cut(s)	629, 1602
Bst2UI	CCWGG	3 cut(s)	174, 1855, 1906
Bst6I	CTCTTC	5 cut(s)	150, 420, 1926, 1983, 2079
BstACI	GRCGYC	1 cut(s)	1839
BstAFI	CTTAAG	1 cut(s)	613
BstAUI	TGTACA	1 cut(s)	1521
BstC8I	GCNNGC	8 cut(s)	963, 1011, 1015, 1019, 1268, 1561, 1650, 2098
BstDEI	CTNAG	8 cut(s)	11, 522, 696, 1166, 1466, 1644, 2061, 2133
BstEII	GGTNACC	2 cut(s)	139, 594
BstF5I	GGATG	6 cut(s)	640, 1093, 1108, 1273, 1477, 1699
BstFNI	CGCG	2 cut(s)	1512, 1563
BstHHI	GCGC	2 cut(s)	369, 1802
BstMAI	GTCTC	3 cut(s)	563, 2208, 2425
BstMCI	CGRYCG	1 cut(s)	294
BstMWI	GCNNNNNNNGC	8 cut(s)	552, 1370, 1598, 1658, 1909, 1918, 1982, 2252
BstNI	CCWGG	3 cut(s)	174, 1855, 1906
BstPAI	GACNNNNGTC	1 cut(s)	1838
BstPI	GGTNACC	2 cut(s)	139, 594
BstSCI	CCNGG	4 cut(s)	172, 288, 1853, 1904
BstSFI	CTRYAG	4 cut(s)	690, 1496, 1659, 2138
BstSLI	GKGCMC	1 cut(s)	877
BstUI	CGCG	2 cut(s)	1512, 1563
BstV1I	GCAGC	6 cut(s)	1438, 1474, 1510, 1997, 2124, 2230
BstV2I	GAAGAC	3 cut(s)	93, 1706, 1797
BstX2I	RGATCY	4 cut(s)	472, 574, 1194, 1663
BstYI	RGATCY	4 cut(s)	472, 574, 1194, 1663
BstZI	CGGCCG	1 cut(s)	291
Bsu36I	CCTNAGG	1 cut(s)	1166
BsuI	GTATCC	1 cut(s)	2012
BsuRI	GGCC	6 cut(s)	255, 293, 555, 1373, 1912, 2096
BtsCI	GGATG	6 cut(s)	640, 1093, 1108, 1273, 1477, 1699
BtsIMutI	CAGTG	4 cut(s)	680, 1104, 1408, 2187
BveI	ACCTGC	1 cut(s)	844
Cac8I	GCNNGC	8 cut(s)	963, 1011, 1015, 1019, 1268, 1561, 1650, 2098
CaiI	CAGNNNCTG	1 cut(s)	1410
CfoI	GCGC	2 cut(s)	369, 1802
Cfr10I	RCCGGY	1 cut(s)	1438
Cfr13I	GGNCC	1 cut(s)	253
CseI	GACGC	1 cut(s)	2407
Csp6I	GTAC	7 cut(s)	353, 526, 1053, 1162, 1522, 2147, 2359
CspCI	CAANNNNNGTGG	4 cut(s)	251, 286, 1838, 1873
CviAII	CATG	6 cut(s)	279, 1424, 1519, 1883, 1982, 2056
CviQI	GTAC	7 cut(s)	353, 526, 1053, 1162, 1522, 2147, 2359
DdeI	CTNAG	8 cut(s)	11, 522, 696, 1166, 1466, 1644, 2061, 2133
EaeI	YGGCCR	3 cut(s)	291, 553, 1371
EagI	CGGCCG	1 cut(s)	291
Eam1104I	CTCTTC	5 cut(s)	150, 420, 1926, 1983, 2079
EarI	CTCTTC	5 cut(s)	150, 420, 1926, 1983, 2079
EciI	GGCGGA	1 cut(s)	488
Ecl136II	GAGCTC	2 cut(s)	1846, 1867
EclXI	CGGCCG	1 cut(s)	291
Eco130I	CCWWGG	2 cut(s)	629, 1602
Eco24I	GRGCYC	3 cut(s)	1848, 1869, 1905
Eco52I	CGGCCG	1 cut(s)	291
Eco53kI	GAGCTC	2 cut(s)	1846, 1867
Eco57I	CTGAAG	3 cut(s)	822, 921, 2348
Eco81I	CCTNAGG	1 cut(s)	1166
Eco91I	GGTNACC	2 cut(s)	139, 594
EcoICRI	GAGCTC	2 cut(s)	1846, 1867
EcoO65I	GGTNACC	2 cut(s)	139, 594
EcoRI	GAATTC	3 cut(s)	789, 1001, 2406
EcoRII	CCWGG	3 cut(s)	172, 1853, 1904
EcoT14I	CCWWGG	2 cut(s)	629, 1602
EcoT22I	ATGCAT	1 cut(s)	1153
EcoT38I	GRGCYC	3 cut(s)	1848, 1869, 1905
ErhI	CCWWGG	2 cut(s)	629, 1602
Esp3I	CGTCTC	2 cut(s)	563, 2425
FaeI	CATG	6 cut(s)	282, 1427, 1522, 1886, 1985, 2059
FalI	AAGNNNNNCTT	4 cut(s)	128, 160, 753, 785
FaqI	GGGAC	3 cut(s)	155, 227, 1901
FatI	CATG	6 cut(s)	278, 1423, 1518, 1882, 1981, 2055
FauI	CCCGC	1 cut(s)	1014
FauNDI	CATATG	4 cut(s)	676, 1346, 1741, 1961
FbaI	TGATCA	2 cut(s)	906, 1042
FblI	GTMKAC	2 cut(s)	518, 1577
Fnu4HI	GCNGC	6 cut(s)	1452, 1463, 1499, 1986, 2138, 2244
FokI	GGATG	6 cut(s)	647, 1100, 1115, 1260, 1464, 1706
FriOI	GRGCYC	3 cut(s)	1848, 1869, 1905
Fsp4HI	GCNGC	6 cut(s)	1452, 1463, 1499, 1986, 2138, 2244
FspBI	CTAG	5 cut(s)	389, 1022, 1593, 1937, 2379
FspI	TGCGCA	1 cut(s)	368
GlaI	GCGC	2 cut(s)	368, 1801
GluI	GCNGC	6 cut(s)	1452, 1463, 1499, 1986, 2138, 2244
GsuI	CTGGAG	2 cut(s)	987, 2111
HaeIII	GGCC	6 cut(s)	255, 293, 555, 1373, 1912, 2096
HapII	CCGG	2 cut(s)	290, 1439
HgaI	GACGC	1 cut(s)	2407
HhaI	GCGC	2 cut(s)	369, 1802
Hin1I	GRCGYC	1 cut(s)	1839
Hin1II	CATG	6 cut(s)	282, 1427, 1522, 1886, 1985, 2059
Hin6I	GCGC	2 cut(s)	367, 1800
HinP1I	GCGC	2 cut(s)	367, 1800
HincII	GTYRAC	3 cut(s)	114, 982, 1578
HindII	GTYRAC	3 cut(s)	114, 982, 1578
HindIII	AAGCTT	4 cut(s)	610, 1264, 1362, 2253
HpaI	GTTAAC	1 cut(s)	114
HpaII	CCGG	2 cut(s)	290, 1439
HphI	GGTGA	3 cut(s)	836, 1052, 1441
Hpy188I	TCNGA	8 cut(s)	490, 664, 863, 887, 1833, 2000, 2236, 2270
Hpy99I	CGWCG	2 cut(s)	1283, 1844
HpyAV	CCTTC	8 cut(s)	49, 776, 797, 1001, 1855, 2033, 2059, 2378
HpyCH4IV	ACGT	1 cut(s)	1839
HpyF10VI	GCNNNNNNNGC	8 cut(s)	552, 1370, 1598, 1658, 1909, 1918, 1982, 2252
HpyF3I	CTNAG	8 cut(s)	11, 522, 696, 1166, 1466, 1644, 2061, 2133
HpySE526I	ACGT	1 cut(s)	1839
Hsp92I	GRCGYC	1 cut(s)	1839
Hsp92II	CATG	6 cut(s)	282, 1427, 1522, 1886, 1985, 2059
HspAI	GCGC	2 cut(s)	367, 1800
Ksp22I	TGATCA	2 cut(s)	906, 1042
KspAI	GTTAAC	1 cut(s)	114
LguI	GCTCTTC	3 cut(s)	1926, 1983, 2079
LmnI	GCTCC	4 cut(s)	176, 1346, 1851, 1864
Lsp1109I	GCAGC	6 cut(s)	1438, 1474, 1510, 1997, 2124, 2230
LweI	GCATC	2 cut(s)	1138, 1146
MaeI	CTAG	5 cut(s)	389, 1022, 1593, 1937, 2379
MaeII	ACGT	1 cut(s)	1839
MaeIII	GTNAC	5 cut(s)	139, 226, 594, 824, 1406
MfeI	CAATTG	1 cut(s)	1533
MflI	RGATCY	4 cut(s)	472, 574, 1194, 1663
MhlI	GDGCHC	4 cut(s)	877, 1848, 1869, 1905
MlyI	GAGTC	5 cut(s)	134, 177, 447, 1376, 1583
MmeI	TCCRAC	3 cut(s)	687, 1212, 2320
Mph1103I	ATGCAT	1 cut(s)	1153
MroXI	GAANNNNTTC	1 cut(s)	1827
MseI	TTAA	6 cut(s)	113, 398, 614, 1262, 1415, 1554
MslI	CAYNNNNRTG	3 cut(s)	204, 623, 1146
MspA1I	CMGCKG	4 cut(s)	1322, 1619, 2137, 2243
MspCI	CTTAAG	1 cut(s)	613
MspI	CCGG	2 cut(s)	290, 1439
MspR9I	CCNGG	4 cut(s)	174, 290, 1855, 1906
MunI	CAATTG	1 cut(s)	1533
Mva1269I	GAATGC	3 cut(s)	131, 179, 2182
MvaI	CCWGG	3 cut(s)	174, 1855, 1906
MvnI	CGCG	2 cut(s)	1512, 1563
MwoI	GCNNNNNNNGC	8 cut(s)	552, 1370, 1598, 1658, 1909, 1918, 1982, 2252
NciI	CCSGG	1 cut(s)	290
NdeI	CATATG	4 cut(s)	676, 1346, 1741, 1961
NlaIII	CATG	6 cut(s)	282, 1427, 1522, 1886, 1985, 2059
NlaIV	GGNNCC	1 cut(s)	576
NmuCI	GTSAC	3 cut(s)	226, 824, 1406
NsbI	TGCGCA	1 cut(s)	368
NsiI	ATGCAT	1 cut(s)	1153
PciSI	GCTCTTC	3 cut(s)	1926, 1983, 2079
PctI	GAATGC	3 cut(s)	131, 179, 2182
PdmI	GAANNNNTTC	1 cut(s)	1827
PfeI	GAWTC	5 cut(s)	61, 888, 973, 1545, 2353
PkrI	GCNGC	6 cut(s)	1453, 1464, 1500, 1987, 2139, 2245
PleI	GAGTC	5 cut(s)	133, 176, 446, 1376, 1582
PpsI	GAGTC	5 cut(s)	133, 176, 446, 1376, 1582
PshAI	GACNNNNGTC	1 cut(s)	1838
PsiI	TTATAA	2 cut(s)	1445, 1626
Psp124BI	GAGCTC	2 cut(s)	1848, 1869
Psp6I	CCWGG	3 cut(s)	172, 1853, 1904
PspEI	GGTNACC	2 cut(s)	139, 594
PspGI	CCWGG	3 cut(s)	172, 1853, 1904
PspN4I	GGNNCC	1 cut(s)	576
PspPI	GGNCC	1 cut(s)	253
PstI	CTGCAG	3 cut(s)	1500, 1663, 2142
PstNI	CAGNNNCTG	1 cut(s)	1410
PsuI	RGATCY	4 cut(s)	472, 574, 1194, 1663
PvuII	CAGCTG	4 cut(s)	1322, 1619, 2137, 2243
RsaI	GTAC	7 cut(s)	354, 527, 1054, 1163, 1523, 2148, 2360
RsaNI	GTAC	7 cut(s)	353, 526, 1053, 1162, 1522, 2147, 2359
RseI	CAYNNNNRTG	3 cut(s)	204, 623, 1146
SacI	GAGCTC	2 cut(s)	1848, 1869
SalI	GTCGAC	1 cut(s)	1576
SapI	GCTCTTC	3 cut(s)	1926, 1983, 2079
SaqAI	TTAA	6 cut(s)	113, 398, 614, 1262, 1415, 1554
SatI	GCNGC	6 cut(s)	1452, 1463, 1499, 1986, 2138, 2244
Sau96I	GGNCC	1 cut(s)	253
SchI	GAGTC	5 cut(s)	134, 177, 447, 1376, 1583
ScrFI	CCNGG	4 cut(s)	174, 290, 1855, 1906
SduI	GDGCHC	4 cut(s)	877, 1848, 1869, 1905
SfaNI	GCATC	2 cut(s)	1138, 1146
SfcI	CTRYAG	4 cut(s)	690, 1496, 1659, 2138
SmiMI	CAYNNNNRTG	3 cut(s)	204, 623, 1146
SmlI	CTYRAG	4 cut(s)	218, 613, 848, 1112
SmoI	CTYRAG	4 cut(s)	218, 613, 848, 1112
SpeI	ACTAGT	2 cut(s)	388, 2378
SsiI	CCGC	7 cut(s)	499, 839, 1007, 1427, 1510, 1563, 2032
SspMI	CTAG	5 cut(s)	389, 1022, 1593, 1937, 2379
SstI	GAGCTC	2 cut(s)	1848, 1869
StyD4I	CCNGG	4 cut(s)	172, 288, 1853, 1904
StyI	CCWWGG	2 cut(s)	629, 1602
TaiI	ACGT	1 cut(s)	1842
TatI	WGTACW	3 cut(s)	1052, 1521, 2146
TfiI	GAWTC	5 cut(s)	61, 888, 973, 1545, 2353
Tru1I	TTAA	6 cut(s)	113, 398, 614, 1262, 1415, 1554
Tru9I	TTAA	6 cut(s)	113, 398, 614, 1262, 1415, 1554
TscAI	CASTG	4 cut(s)	687, 1104, 1415, 2194
TseFI	GTSAC	3 cut(s)	226, 824, 1406
TseI	GCWGC	6 cut(s)	1451, 1462, 1498, 1985, 2137, 2243
Tsp45I	GTSAC	3 cut(s)	226, 824, 1406
TspGWI	ACGGA	4 cut(s)	587, 783, 1296, 2346
TspRI	CASTG	4 cut(s)	687, 1104, 1415, 2194
Vha464I	CTTAAG	1 cut(s)	613
VneI	GTGCAC	1 cut(s)	873
XapI	RAATTY	8 cut(s)	789, 855, 944, 1001, 1699, 2051, 2264, 2406
XcmI	CCANNNNNNNNNTGG	2 cut(s)	958, 1351
XmiI	GTMKAC	2 cut(s)	518, 1577
XmnI	GAANNNNTTC	1 cut(s)	1827
XspI	CTAG	5 cut(s)	389, 1022, 1593, 1937, 2379
ZraI	GACGTC	1 cut(s)	1840
Zsp2I	ATGCAT	1 cut(s)	1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.