pycom12433g00060

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012433
Physical Location & Seq
Forward (+)
31734 .. 35589
3856 bp
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UTR
Exon/CDS
Intron
pycom12433g00060.1

Sequence Viewer

Length: 2523 bp
ATGTTGCACAACCTGCTTGGCAAAATCACGGGCCAGCAGCAAGATGGGGAGAGTAATATTGGAAAAATCAATGGGACTGTGGTGCTTCGGTTCTTGATCGATGTGCATGAGTTGGTCGGCCAAAGGGTTTCTCTGCAGCTCATCAGTGCTGTTCGTGGTGATCCTGACAATGGATTGAAGGGGAAGCTTGGAAAACAAGCATATTTGGAAGACTGGATTACCACAATTACACCGTTAACAGCAGGAGAGTCTGCATTCAAGGTTACCTTTGACTGGGAAGAGGAAGTAGGAGTTCCAGGAGCATTCATAATACAAAACAATCATCATAGTGAGTTCTTCCTCAAGACTGTCACACTCGATAATGTCCCCGATGAGGGCCGTGTCCACTTTGTTTGCAATTCATGGGTTTACCCTGCCGAAAAATACACCAAAGACCGTGTTTTCTTCGCTAACAAGACTTATCTTCCAAGCGAAGTACCATTGCCGTTGCGCAAATACATAGAAGAAGAACTAGTAGAATTAAGAGGAGATGGAAAACGAAAGCTCGAAGAGTGGGATAGAGTCTATGACTATGCTTACTACAATGATCTGGGAGATCCTGATAAGGGTTCGGAATATGTCCGCCCAATTATGGGAGGGTCTACTGAGTACCCTTACCCTCGCAGGGGCAGAACTGGCCGACCACCAAAAGAGACGGATCCTAACACCGAGAGTAGGTTACCGATTGTTTCAAGCTTAAGCATATATGTGCCAAGGGATGAACGGTTTGGACACTTGAAGATGTCAGACTTCCTTGCATATGCACTGAAATCTATAGCTCAGTTTATTAGACCAGAGATGGAAGCCTTGTTTGATAAAACTCCTAACGAGTTTGACAGCTTCGAAGATGTGCTTCAACTCTACGAAGGAGGAATTCCGTTGCCTGAAGGTTTATTCAAGGAAATTGGAGACAACATACCTACGGAGATGCTCAAGGAAATTTTCCGAACTGATGGTGCACAGTTCCTCCGATTCCCAATGCCTGAAGTGATCAAAGAGGACAAGACTGCTTGGAGGACTGATGAAGAATTTGCCAGAGAAATGCTGGCTGGAGTGAATCCTGTCAACATTCGCCTTCTTCAAGAATTCCCGCCGGCAAGCAAGCTAGACCCAAAAGTTTACGGTGATCAAACCAGTACAATAACCGAACAACATATAAGGAATAACTTGGATGGACTAACAGTGGACGAGATCGATCATGATGCATTGATGCCGTACCTGAGGCGGATAAACTCAACTTCCAACAAGATCTACGGTAGCAGAACTCTCCTGTTCTTGAAAAGTGATGGAACTTTGAAGTTATTAGTGATCGAATTAAGCTTGCCTCATCCCGACGGAGATCAATATGGTTGCATTAGTAATGTTTACACACCAGCTGAACAAGGTGTAGAAAGCTCCATATGGCAACTGGCTAAAGCTTATGTGGCCGTAAACGACTCTGGAAATCATCAACTTATCAGTCACTGGTTAAACACCCATGCGGTGATTGAGCCGGTTATAATAGCTGCGAATAGGCAGCTAAGCGTGGTTCATCCAATTTACAAACTTCTGCAGCCTCATTTCCGCGATACCATGTACATCAATGCAATTGGCAGGGGAATCCTTCTTAATGCTCGCGGAGTTATAGAGTCGACAGTTTTTCCAGCTAGGTATGCCTTGGGGTTGTCATCAGCTGTTTATAAAGATTGGGTTTTTCCTGAGCAAGCTCTCCCTGCAGATCTCATCAAGAGAGGAGTGGCAGTCAAGGATGAAAATTCTCCGCACGGTCTTCGCCTACTGATAGAGGATTATCCATATGCTGTTGATGGGATTGAAATCTGGTTTGCAATAAAAACTTGGGTCGAAGACTATTGCGCTTTCTACTACAAGGCCAATGACATAATTCAGACAGACGTCGAGCTCCAATCCTGGTGGAAGGAGCTCGTAGAGGAGGGTCATGGGGACATAAAAGATGAGCCATGGTGGCCTAAAATGCAGACTTTTGAAGAGCTAGTTGAAACTTGCACTATCCTCATATGGACTGCTTCTGCCCTTCATGCAGCCCTCAACTTTGGACAGTTCTCTTATGCAGGATACCTTCCCAACCGCCCAACCATAAGCCGAAAATTCATGCCTGAGAAGGGAACTCCCGAATACGAAGAGCTCGAGGCCGGCCCCGATACCGTTTTCTTGAAAACAATTACCGCTCAGCTGCAGACTGTACTTGGTATTGCCACCATTGAGATTTTGTCAAGGCATTCCACTGATGAAGTGTATTTAGGGCAGAGAGACACTCCTGACTGGACATCGGACACAGCTGCATTGGAAGCTTTCGAGAAATTCGGAAAGAAACTGGCTGAAATCGAGGATCGAATTACAAGTATGAACAATGATGATAAACTGAAGAACCGAGTTGGATCAGTCAAGATCCCATACACTTTGCTCTTTCCTACTAGTGAAGGTGGAATTACCGGCAAGGGAATTCCCAACAGTGTCTCTATCTAA

Protein Analysis

841

Amino Acids

95.18

Weight (kDa)

5.02

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 45 - 149 1.7e-24 PLAT/LH2 domain
Lipoxygenase PF00305 163 - 823 4.1e-299 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1538, 1719
AatII GACGTC 1 cut(s) 1935
Acc16I TGCGCA 1 cut(s) 491
Acc36I ACCTGC 1 cut(s) 21
AccBSI CCGCTC 1 cut(s) 2225
AccI GTMKAC 2 cut(s) 641, 1670
AccII CGCG 2 cut(s) 1605, 1656
AciI CCGC 9 cut(s) 622, 1130, 1264, 1520, 1603, 1656, 1799, 2125, 2223
AclWI GGATC 7 cut(s) 155, 590, 692, 705, 2394, 2440, 2443
AcoI YGGCCR 3 cut(s) 118, 676, 1464
AcsI RAATTY 8 cut(s) 912, 978, 1067, 1124, 1792, 2144, 2357, 2499
AcuI CTGAAG 3 cut(s) 945, 1044, 2441
AcyI GRCGYC 1 cut(s) 1932
AfaI GTAC 6 cut(s) 477, 650, 1177, 1256, 1616, 2241
AflII CTTAAG 1 cut(s) 736
AhlI ACTAGT 2 cut(s) 511, 2471
AjnI CCWGG 2 cut(s) 295, 1946
Alw21I GWGCWC 4 cut(s) 1000, 1941, 1962, 2184
Alw26I GTCTC 4 cut(s) 686, 942, 2301, 2518
Alw44I GTGCAC 1 cut(s) 996
AlwI GGATC 7 cut(s) 155, 590, 692, 705, 2394, 2440, 2443
AlwNI CAGNNNCTG 1 cut(s) 1503
Ama87I CYCGRG 1 cut(s) 2183
AoxI GGCC 9 cut(s) 31, 118, 376, 676, 1464, 1908, 2003, 2187, 2191
ApaLI GTGCAC 1 cut(s) 996
ApeKI GCWGC 8 cut(s) 37, 136, 1544, 1555, 1591, 2078, 2230, 2336
ApoI RAATTY 8 cut(s) 912, 978, 1067, 1124, 1792, 2144, 2357, 2499
AspLEI GCGC 2 cut(s) 492, 1895
AspS9I GGNCC 3 cut(s) 31, 376, 2192
AsuHPI GGTGA 3 cut(s) 170, 1175, 1534
AsuII TTCGAA 1 cut(s) 882
AvaI CYCGRG 1 cut(s) 2183
AxyI CCTNAGG 1 cut(s) 1259
BaeGI GKGCMC 1 cut(s) 1000
BamHI GGATCC 1 cut(s) 697
BanII GRGCYC 3 cut(s) 1941, 1962, 2184
BbsI GAAGAC 3 cut(s) 216, 1799, 1890
Bbv12I GWGCWC 4 cut(s) 1000, 1941, 1962, 2184
BbvI GCAGC 8 cut(s) 49, 148, 1531, 1567, 1603, 2090, 2217, 2323
BccI CCATC 7 cut(s) 38, 524, 832, 986, 1205, 1319, 1838
BceAI ACGGC 4 cut(s) 363, 469, 1237, 1451
BcgI CGANNNNNNTGC 4 cut(s) 1223, 1257, 1790, 1824
BciT130I CCWGG 2 cut(s) 297, 1948
BciVI GTATCC 1 cut(s) 2105
BclI TGATCA 2 cut(s) 1029, 1165
BcoDI GTCTC 4 cut(s) 686, 942, 2301, 2518
BcuI ACTAGT 2 cut(s) 511, 2471
BfaI CTAG 5 cut(s) 512, 1145, 1686, 2030, 2472
BfmI CTRYAG 5 cut(s) 134, 813, 1589, 1752, 2231
BfrI CTTAAG 1 cut(s) 736
BfuAI ACCTGC 1 cut(s) 21
BfuI GTATCC 1 cut(s) 2105
BglI GCCNNNNNGGC 1 cut(s) 2002
BglII AGATCT 2 cut(s) 1287, 1756
BisI GCNGC 8 cut(s) 38, 137, 1545, 1556, 1592, 2079, 2231, 2337
BlpI GCTNAGC 2 cut(s) 1559, 2226
BlsI GCNGC 8 cut(s) 39, 138, 1546, 1557, 1593, 2080, 2232, 2338
Bme1390I CCNGG 2 cut(s) 297, 1948
BmeT110I CYCGRG 1 cut(s) 2183
BmgT120I GGNCC 3 cut(s) 31, 376, 2192
BmiI GGNNCC 2 cut(s) 699, 2194
BmrFI CCNGG 2 cut(s) 297, 1948
BmrI ACTGGG 1 cut(s) 283
BmsI GCATC 3 cut(s) 957, 1231, 1239
BmuI ACTGGG 1 cut(s) 283
BoxI GACNNNNGTC 1 cut(s) 1931
BpiI GAAGAC 3 cut(s) 216, 1799, 1890
BplI GAGNNNNNCTC 2 cut(s) 2296, 2328
BpmI CTGGAG 1 cut(s) 1110
Bpu10I CCTNAGC 1 cut(s) 1737
Bpu1102I GCTNAGC 2 cut(s) 1559, 2226
Bpu14I TTCGAA 1 cut(s) 882
BpuEI CTTGAG 2 cut(s) 326, 956
Bsa29I ATCGAT 2 cut(s) 99, 1233
BsaBI GATNNNNATC 1 cut(s) 1853
BsaHI GRCGYC 1 cut(s) 1932
BsaJI CCNNGG 3 cut(s) 752, 1695, 1997
BsaXI ACNNNNNCTCC 4 cut(s) 990, 1020, 1764, 1794
Bse118I RCCGGY 4 cut(s) 1132, 1531, 2189, 2489
Bse1I ACTGG 8 cut(s) 218, 278, 679, 1173, 1452, 1508, 2324, 2376
Bse21I CCTNAGG 1 cut(s) 1259
Bse3DI GCAATG 1 cut(s) 479
Bse8I GATNNNNATC 1 cut(s) 1853
BseBI CCWGG 2 cut(s) 297, 1948
BseCI ATCGAT 2 cut(s) 99, 1233
BseDI CCNNGG 3 cut(s) 752, 1695, 1997
BseGI GGATG 5 cut(s) 763, 1216, 1366, 1570, 1792
BseJI GATNNNNATC 1 cut(s) 1853
BseMI GCAATG 1 cut(s) 479
BseMII CTCAG 6 cut(s) 636, 833, 1250, 1728, 2145, 2240
BseNI ACTGG 8 cut(s) 218, 278, 679, 1173, 1452, 1508, 2324, 2376
BseRI GAGGAG 3 cut(s) 540, 1785, 1982
BseSI GKGCMC 1 cut(s) 1000
BseXI GCAGC 8 cut(s) 49, 148, 1531, 1567, 1603, 2090, 2217, 2323
Bsh1236I CGCG 2 cut(s) 1605, 1656
BshFI GGCC 9 cut(s) 33, 120, 378, 678, 1466, 1910, 2005, 2189, 2193
BshVI ATCGAT 2 cut(s) 99, 1233
BsiHKAI GWGCWC 4 cut(s) 1000, 1941, 1962, 2184
BsiHKCI CYCGRG 1 cut(s) 2183
BsiSI CCGG 4 cut(s) 1133, 1532, 2190, 2490
BslFI GGGAC 3 cut(s) 88, 350, 1994
BsmAI GTCTC 4 cut(s) 686, 942, 2301, 2518
BsmBI CGTCTC 1 cut(s) 686
BsmFI GGGAC 3 cut(s) 88, 350, 1994
BsmI GAATGC 3 cut(s) 254, 302, 2275
BsnI GGCC 9 cut(s) 33, 120, 378, 678, 1466, 1910, 2005, 2189, 2193
BsoBI CYCGRG 1 cut(s) 2183
Bsp119I TTCGAA 1 cut(s) 882
Bsp1286I GDGCHC 4 cut(s) 1000, 1941, 1962, 2184
Bsp1407I TGTACA 1 cut(s) 1614
Bsp1720I GCTNAGC 2 cut(s) 1559, 2226
Bsp19I CCATGG 1 cut(s) 1997
BspACI CCGC 9 cut(s) 622, 1130, 1264, 1520, 1603, 1656, 1799, 2125, 2223
BspANI GGCC 9 cut(s) 33, 120, 378, 678, 1466, 1910, 2005, 2189, 2193
BspCNI CTCAG 6 cut(s) 637, 832, 1251, 1729, 2146, 2239
BspDI ATCGAT 2 cut(s) 99, 1233
BspFNI CGCG 2 cut(s) 1605, 1656
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 2 cut(s) 699, 2194
BspMAI CTGCAG 4 cut(s) 138, 1593, 1756, 2235
BspMI ACCTGC 1 cut(s) 21
BspPI GGATC 7 cut(s) 155, 590, 692, 705, 2394, 2440, 2443
BspQI GCTCTTC 2 cut(s) 2019, 2172
BspT104I TTCGAA 1 cut(s) 882
BspTI CTTAAG 1 cut(s) 736
BsrBI CCGCTC 1 cut(s) 2225
BsrDI GCAATG 1 cut(s) 479
BsrFI RCCGGY 4 cut(s) 1132, 1531, 2189, 2489
BsrGI TGTACA 1 cut(s) 1614
BsrI ACTGG 8 cut(s) 218, 278, 679, 1173, 1452, 1508, 2324, 2376
BssAI RCCGGY 4 cut(s) 1132, 1531, 2189, 2489
BssECI CCNNGG 3 cut(s) 752, 1695, 1997
BssNI GRCGYC 1 cut(s) 1932
BssT1I CCWWGG 3 cut(s) 752, 1695, 1997
Bst2UI CCWGG 2 cut(s) 297, 1948
Bst6I CTCTTC 4 cut(s) 273, 543, 2019, 2172
BstACI GRCGYC 1 cut(s) 1932
BstAFI CTTAAG 1 cut(s) 736
BstAPI GCANNNNNTGC 1 cut(s) 13
BstAUI TGTACA 1 cut(s) 1614
BstBI TTCGAA 1 cut(s) 882
BstC8I GCNNGC 9 cut(s) 35, 1086, 1134, 1138, 1142, 1361, 1654, 1743, 2191
BstDEI CTNAG 7 cut(s) 645, 819, 1259, 1559, 1737, 2154, 2226
BstDSI CCRYGG 1 cut(s) 1997
BstEII GGTNACC 2 cut(s) 262, 717
BstF5I GGATG 5 cut(s) 763, 1216, 1366, 1570, 1792
BstFNI CGCG 2 cut(s) 1605, 1656
BstHHI GCGC 2 cut(s) 492, 1895
BstMAI GTCTC 4 cut(s) 686, 942, 2301, 2518
BstMWI GCNNNNNNNGC 9 cut(s) 13, 675, 1463, 1691, 1751, 2002, 2011, 2075, 2345
BstNI CCWGG 2 cut(s) 297, 1948
BstPAI GACNNNNGTC 1 cut(s) 1931
BstPI GGTNACC 2 cut(s) 262, 717
BstSCI CCNGG 2 cut(s) 295, 1946
BstSFI CTRYAG 5 cut(s) 134, 813, 1589, 1752, 2231
BstSLI GKGCMC 1 cut(s) 1000
BstUI CGCG 2 cut(s) 1605, 1656
BstV1I GCAGC 8 cut(s) 49, 148, 1531, 1567, 1603, 2090, 2217, 2323
BstV2I GAAGAC 3 cut(s) 216, 1799, 1890
BstX2I RGATCY 5 cut(s) 595, 697, 1287, 1756, 2445
BstYI RGATCY 5 cut(s) 595, 697, 1287, 1756, 2445
Bsu15I ATCGAT 2 cut(s) 99, 1233
Bsu36I CCTNAGG 1 cut(s) 1259
BsuI GTATCC 1 cut(s) 2105
BsuRI GGCC 9 cut(s) 33, 120, 378, 678, 1466, 1910, 2005, 2189, 2193
BsuTUI ATCGAT 2 cut(s) 99, 1233
BtgI CCRYGG 1 cut(s) 1997
BtsCI GGATG 5 cut(s) 763, 1216, 1366, 1570, 1792
BtsIMutI CAGTG 6 cut(s) 151, 803, 1227, 1501, 2280, 2515
BveI ACCTGC 1 cut(s) 21
Cac8I GCNNGC 9 cut(s) 35, 1086, 1134, 1138, 1142, 1361, 1654, 1743, 2191
CaiI CAGNNNCTG 1 cut(s) 1503
CciI TCATGA 1 cut(s) 1237
CfoI GCGC 2 cut(s) 492, 1895
Cfr10I RCCGGY 4 cut(s) 1132, 1531, 2189, 2489
Cfr13I GGNCC 3 cut(s) 31, 376, 2192
ClaI ATCGAT 2 cut(s) 99, 1233
Csp6I GTAC 6 cut(s) 476, 649, 1176, 1255, 1615, 2240
CspCI CAANNNNNGTGG 4 cut(s) 374, 409, 1931, 1966
CviAII CATG 9 cut(s) 107, 402, 1238, 1517, 1612, 1976, 1998, 2075, 2149
CviQI GTAC 6 cut(s) 476, 649, 1176, 1255, 1615, 2240
DdeI CTNAG 7 cut(s) 645, 819, 1259, 1559, 1737, 2154, 2226
EaeI YGGCCR 3 cut(s) 118, 676, 1464
Eam1104I CTCTTC 4 cut(s) 273, 543, 2019, 2172
EarI CTCTTC 4 cut(s) 273, 543, 2019, 2172
EciI GGCGGA 2 cut(s) 611, 1279
Ecl136II GAGCTC 3 cut(s) 1939, 1960, 2182
Eco130I CCWWGG 3 cut(s) 752, 1695, 1997
Eco24I GRGCYC 3 cut(s) 1941, 1962, 2184
Eco53kI GAGCTC 3 cut(s) 1939, 1960, 2182
Eco57I CTGAAG 3 cut(s) 945, 1044, 2441
Eco81I CCTNAGG 1 cut(s) 1259
Eco88I CYCGRG 1 cut(s) 2183
Eco91I GGTNACC 2 cut(s) 262, 717
EcoICRI GAGCTC 3 cut(s) 1939, 1960, 2182
EcoO65I GGTNACC 2 cut(s) 262, 717
EcoRI GAATTC 3 cut(s) 912, 1124, 2499
EcoRII CCWGG 2 cut(s) 295, 1946
EcoT14I CCWWGG 3 cut(s) 752, 1695, 1997
EcoT22I ATGCAT 1 cut(s) 1246
EcoT38I GRGCYC 3 cut(s) 1941, 1962, 2184
ErhI CCWWGG 3 cut(s) 752, 1695, 1997
Esp3I CGTCTC 1 cut(s) 686
FaeI CATG 9 cut(s) 110, 405, 1241, 1520, 1615, 1979, 2001, 2078, 2152
FalI AAGNNNNNCTT 4 cut(s) 251, 283, 876, 908
FaqI GGGAC 3 cut(s) 88, 350, 1994
FatI CATG 9 cut(s) 106, 401, 1237, 1516, 1611, 1975, 1997, 2074, 2148
FauI CCCGC 1 cut(s) 1137
FauNDI CATATG 4 cut(s) 799, 1439, 1834, 2054
FbaI TGATCA 2 cut(s) 1029, 1165
FblI GTMKAC 2 cut(s) 641, 1670
Fnu4HI GCNGC 8 cut(s) 38, 137, 1545, 1556, 1592, 2079, 2231, 2337
FokI GGATG 5 cut(s) 770, 1223, 1353, 1557, 1799
FriOI GRGCYC 3 cut(s) 1941, 1962, 2184
FseI GGCCGGCC 1 cut(s) 2193
Fsp4HI GCNGC 8 cut(s) 38, 137, 1545, 1556, 1592, 2079, 2231, 2337
FspBI CTAG 5 cut(s) 512, 1145, 1686, 2030, 2472
FspI TGCGCA 1 cut(s) 491
GlaI GCGC 2 cut(s) 491, 1894
GluI GCNGC 8 cut(s) 38, 137, 1545, 1556, 1592, 2079, 2231, 2337
GsuI CTGGAG 1 cut(s) 1110
HaeIII GGCC 9 cut(s) 33, 120, 378, 678, 1466, 1910, 2005, 2189, 2193
HapII CCGG 4 cut(s) 1133, 1532, 2190, 2490
HhaI GCGC 2 cut(s) 492, 1895
Hin1I GRCGYC 1 cut(s) 1932
Hin1II CATG 9 cut(s) 110, 405, 1241, 1520, 1615, 1979, 2001, 2078, 2152
Hin6I GCGC 2 cut(s) 490, 1893
HinP1I GCGC 2 cut(s) 490, 1893
HincII GTYRAC 3 cut(s) 237, 1105, 1671
HindII GTYRAC 3 cut(s) 237, 1105, 1671
HindIII AAGCTT 5 cut(s) 185, 733, 1357, 1455, 2346
HinfI GANTC 7 cut(s) 248, 561, 1011, 1096, 1475, 1638, 1667
HpaI GTTAAC 1 cut(s) 237
HpaII CCGG 4 cut(s) 1133, 1532, 2190, 2490
HphI GGTGA 3 cut(s) 170, 1175, 1534
Hpy188I TCNGA 7 cut(s) 613, 787, 986, 1010, 1926, 2329, 2363
Hpy99I CGWCG 2 cut(s) 1376, 1937
HpyCH4IV ACGT 1 cut(s) 1932
HpyF10VI GCNNNNNNNGC 9 cut(s) 13, 675, 1463, 1691, 1751, 2002, 2011, 2075, 2345
HpyF3I CTNAG 7 cut(s) 645, 819, 1259, 1559, 1737, 2154, 2226
HpySE526I ACGT 1 cut(s) 1932
Hsp92I GRCGYC 1 cut(s) 1932
Hsp92II CATG 9 cut(s) 110, 405, 1241, 1520, 1615, 1979, 2001, 2078, 2152
HspAI GCGC 2 cut(s) 490, 1893
KroI GCCGGC 2 cut(s) 1132, 2189
KroNI GCCGGC 2 cut(s) 1134, 2191
Ksp22I TGATCA 2 cut(s) 1029, 1165
KspAI GTTAAC 1 cut(s) 237
LguI GCTCTTC 2 cut(s) 2019, 2172
LmnI GCTCC 4 cut(s) 299, 1439, 1944, 1957
Lsp1109I GCAGC 8 cut(s) 49, 148, 1531, 1567, 1603, 2090, 2217, 2323
LweI GCATC 3 cut(s) 957, 1231, 1239
MaeI CTAG 5 cut(s) 512, 1145, 1686, 2030, 2472
MaeII ACGT 1 cut(s) 1932
MaeIII GTNAC 4 cut(s) 262, 349, 717, 1499
MbiI CCGCTC 1 cut(s) 2225
MfeI CAATTG 1 cut(s) 1626
MflI RGATCY 5 cut(s) 595, 697, 1287, 1756, 2445
MhlI GDGCHC 4 cut(s) 1000, 1941, 1962, 2184
MlyI GAGTC 4 cut(s) 257, 570, 1469, 1676
MmeI TCCRAC 2 cut(s) 1305, 2413
Mph1103I ATGCAT 1 cut(s) 1246
MroNI GCCGGC 2 cut(s) 1132, 2189
MseI TTAA 6 cut(s) 236, 521, 737, 1355, 1508, 1647
MslI CAYNNNNRTG 2 cut(s) 327, 746
MspA1I CMGCKG 4 cut(s) 1415, 1712, 2230, 2336
MspCI CTTAAG 1 cut(s) 736
MspI CCGG 4 cut(s) 1133, 1532, 2190, 2490
MspR9I CCNGG 2 cut(s) 297, 1948
MunI CAATTG 1 cut(s) 1626
Mva1269I GAATGC 3 cut(s) 254, 302, 2275
MvaI CCWGG 2 cut(s) 297, 1948
MvnI CGCG 2 cut(s) 1605, 1656
MwoI GCNNNNNNNGC 9 cut(s) 13, 675, 1463, 1691, 1751, 2002, 2011, 2075, 2345
NaeI GCCGGC 2 cut(s) 1134, 2191
NcoI CCATGG 1 cut(s) 1997
NdeI CATATG 4 cut(s) 799, 1439, 1834, 2054
NgoMIV GCCGGC 2 cut(s) 1132, 2189
NlaIII CATG 9 cut(s) 110, 405, 1241, 1520, 1615, 1979, 2001, 2078, 2152
NlaIV GGNNCC 2 cut(s) 699, 2194
NmuCI GTSAC 2 cut(s) 349, 1499
NsbI TGCGCA 1 cut(s) 491
NsiI ATGCAT 1 cut(s) 1246
NspV TTCGAA 1 cut(s) 882
PaeR7I CTCGAG 1 cut(s) 2183
PagI TCATGA 1 cut(s) 1237
PciSI GCTCTTC 2 cut(s) 2019, 2172
PcsI WCGNNNNNNNCGW 1 cut(s) 2181
PctI GAATGC 3 cut(s) 254, 302, 2275
PdiI GCCGGC 2 cut(s) 1134, 2191
PfeI GAWTC 3 cut(s) 1011, 1096, 1638
PfoI TCCNGGA 1 cut(s) 295
PkrI GCNGC 8 cut(s) 39, 138, 1546, 1557, 1593, 2080, 2232, 2338
PleI GAGTC 4 cut(s) 256, 569, 1469, 1675
PpsI GAGTC 4 cut(s) 256, 569, 1469, 1675
PshAI GACNNNNGTC 1 cut(s) 1931
PsiI TTATAA 2 cut(s) 1538, 1719
Psp124BI GAGCTC 3 cut(s) 1941, 1962, 2184
Psp6I CCWGG 2 cut(s) 295, 1946
PspEI GGTNACC 2 cut(s) 262, 717
PspGI CCWGG 2 cut(s) 295, 1946
PspN4I GGNNCC 2 cut(s) 699, 2194
PspPI GGNCC 3 cut(s) 31, 376, 2192
PspXI VCTCGAGB 1 cut(s) 2183
PstI CTGCAG 4 cut(s) 138, 1593, 1756, 2235
PstNI CAGNNNCTG 1 cut(s) 1503
PsuI RGATCY 5 cut(s) 595, 697, 1287, 1756, 2445
PvuII CAGCTG 4 cut(s) 1415, 1712, 2230, 2336
RigI GGCCGGCC 1 cut(s) 2193
RsaI GTAC 6 cut(s) 477, 650, 1177, 1256, 1616, 2241
RsaNI GTAC 6 cut(s) 476, 649, 1176, 1255, 1615, 2240
RseI CAYNNNNRTG 2 cut(s) 327, 746
SacI GAGCTC 3 cut(s) 1941, 1962, 2184
SalI GTCGAC 1 cut(s) 1669
SapI GCTCTTC 2 cut(s) 2019, 2172
SaqAI TTAA 6 cut(s) 236, 521, 737, 1355, 1508, 1647
SatI GCNGC 8 cut(s) 38, 137, 1545, 1556, 1592, 2079, 2231, 2337
Sau96I GGNCC 3 cut(s) 31, 376, 2192
SchI GAGTC 4 cut(s) 257, 570, 1469, 1676
ScrFI CCNGG 2 cut(s) 297, 1948
SduI GDGCHC 4 cut(s) 1000, 1941, 1962, 2184
SfaNI GCATC 3 cut(s) 957, 1231, 1239
SfcI CTRYAG 5 cut(s) 134, 813, 1589, 1752, 2231
Sfr274I CTCGAG 1 cut(s) 2183
SfuI TTCGAA 1 cut(s) 882
SlaI CTCGAG 1 cut(s) 2183
SmiMI CAYNNNNRTG 2 cut(s) 327, 746
SmlI CTYRAG 4 cut(s) 341, 736, 971, 2183
SmoI CTYRAG 4 cut(s) 341, 736, 971, 2183
SpeI ACTAGT 2 cut(s) 511, 2471
SsiI CCGC 9 cut(s) 622, 1130, 1264, 1520, 1603, 1656, 1799, 2125, 2223
SspI AATATT 1 cut(s) 58
SspMI CTAG 5 cut(s) 512, 1145, 1686, 2030, 2472
SstI GAGCTC 3 cut(s) 1941, 1962, 2184
StyD4I CCNGG 2 cut(s) 295, 1946
StyI CCWWGG 3 cut(s) 752, 1695, 1997
TaiI ACGT 1 cut(s) 1935
TatI WGTACW 3 cut(s) 1175, 1614, 2239
TfiI GAWTC 3 cut(s) 1011, 1096, 1638
Tru1I TTAA 6 cut(s) 236, 521, 737, 1355, 1508, 1647
Tru9I TTAA 6 cut(s) 236, 521, 737, 1355, 1508, 1647
TscAI CASTG 6 cut(s) 151, 810, 1227, 1508, 2287, 2515
TseFI GTSAC 2 cut(s) 349, 1499
TseI GCWGC 8 cut(s) 37, 136, 1544, 1555, 1591, 2078, 2230, 2336
Tsp45I GTSAC 2 cut(s) 349, 1499
TspGWI ACGGA 4 cut(s) 710, 906, 977, 1389
TspRI CASTG 6 cut(s) 151, 810, 1227, 1508, 2287, 2515
Vha464I CTTAAG 1 cut(s) 736
VneI GTGCAC 1 cut(s) 996
XapI RAATTY 8 cut(s) 912, 978, 1067, 1124, 1792, 2144, 2357, 2499
XcmI CCANNNNNNNNNTGG 3 cut(s) 41, 1081, 1444
XhoI CTCGAG 1 cut(s) 2183
XmiI GTMKAC 2 cut(s) 641, 1670
XspI CTAG 5 cut(s) 512, 1145, 1686, 2030, 2472
ZraI GACGTC 1 cut(s) 1933
Zsp2I ATGCAT 1 cut(s) 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.