FvH4_6g06100

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000763
Physical Location & Seq
Forward (+)
3484307 .. 3489229
4923 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06100.t1

Sequence Viewer

Length: 2760 bp
ATGCTTCATTTCAAGTTTCATCAAACTCCTCTGATCAGAACCAAACCTCCTCCATGTCCACTTGGAGCTCGCCTGAGCTCATCAGCTGTTGCAGTCAATGGCAAACTACTAGTGCCAGCTGGGTTTGTGTCCATGACCAATGTGAGACGATCTCGGCCGTTGACTGTGTCAGCTAGCAGCTCTTCCCAGAGCACCACCACCATTGAACCTCCGAGTGATGCCAACAACATCAAAGGGACCGTGGTTTTGATGAAGAAGAATCTTCTGGAGCTCAACGACCTCGGAGCTTCTTTCATCGACCGTGTTCATGAGCTTTTGGGGAAAGCTGTTTCTCTCCGGCTCGTCAGTGCTGTCAACACTGACCCTGCAAATGGGAATCGAGGAAAAATTGGGAAGGCTGCTTATTTGGAGAATTGGATCTCCAAAGTTACCCCATTGACAGCAGCAGAGTGTGCATTTAAGGTTAATTTTGTTTGGGATGAGAAGATTGGAGTGCCAGGAGCTTTCATCATAAGAAATGAACATGCCAGTGAGTTTTACTTGAAGTCTCTCACACTTGAAAACGTTCCCGGAAAAGGTAGAGTTCACTTTGATTGCAACTCATGGGTGTACCCTGCTGACAAGTACAAGAAAGACAGGGTTTTCTTCACTAACAAGACGTATCTTTCGAGTGAGACGCCGGTTGGACTAAAGAAGTTTAGAGAAGAAGAGCTAGTGACCTTGAGAGGTGATGATGTTGTTAAAAAGGGAGAGCTTCAGGAATGGGACAGGGTTTATGACTATGCTTATTACAATGACTTGGGGAGTCCAGACAAAGGTGAGAAGTATGCTCGCCCAATTCTTGGAGGGTCGGCCGAGTTCCCTTATCCTCGAAGGGGAAGAACTGGAAGAGCCGCAAACTTGAAAGATCCCAAGAGTGAGAGACCTCTGCCTCTTGTTAAGGGCTTATTTGTATATGTTCCAAGAGACGAAAAATTTGGTCACTTGAAGATGTCAGACTTGATTGCATATGCCCTGAAATCGATATCTCAGATCCTGAAACCTGATGAGCTAGCTACTCTACTTGGTCATCAAAAAGAGTTTGACAGCTTGGAAGATGTACTTAAGCTCTATGAAGGAGGAGTAGAGTTGCCAGAGGGCTTGTTAAAGTTTGTCAGGAGTACCACCCCTGCCGAGACAGTGAAGGAACTTTTCCGGACTGATGGTGAACGATTGCTGAAGTTCCCGGTGCCTCAAGTGATCAAAGAGGATAAGTCGGCATGGAGAACTGATGAGGAGTTTGCAAGAGAAATGTTGGCTGGTCTAAACCCTGTCAGCATACATCGTCTCCAGGAGTTTCCGCCAGCTAGCAAGCTAGACCCAAATGTATATGGAGATCAAACCAGTAAGATAACCAAAGAACACATAGCAGATAAATTAGATGGACTCAGCATAGATGAGGCAATCAACAAGAACAAGCTGTTCATACTAGACCACCATGATTCATTGATGCCTTACTTGGAGCGTATAAATGCAACTTCTGTAAAAGGTTATGCAAGCAGGACACTCCTTTTCTTGAAAAATGATGGGACCTTGAAGCCAGTAGCTATTGAATTGAGCGTGCCAAATCCTGGCGGAGTTGGTTGCACTAGCGAAGTCTACACTCCAGCTAGCCAAGGCGTTGAGAGTCACATTTGGCAGCTCGCCAAAGCTTATGTGGCTATAAACGACTCAGGCTATCATCAGCTTGTCAGCCACTGGTTGAGAACTCATGCAGTGATTGAGCCGGTTATCATAGCAACAAACAGGCAGTTGAGCGTGCTTCACCCAATTTACAAGCTTCTACATCCTCATTTTCGTGACACCATGAATGTAAACGCAGTAGCGCGACAGATTCTCATTAATGCTGGTGGAGTGCTAGAGAACACAGTCTTTCCTGCAAAATATTCCATGGAATGGTCGTCTGTGATGTACAAGAACAGCTGGGTTTTTCCTGAACAAGCACTCCCCAAGGATCTGATCAAAAGAGGAATGGCGGTTGAAGATTCAAGCGCTTCACACGGTGTGCGGTTACTAGTAGAGGACTATCCATATGCTGCTGATGGGCTTGAAATCTGGTCTGCAATCAGAACATGGGTGGAAGAGTATTGCTCCTTCTACTTCAAAACTGATGAAATGGTGCAAAAGGACTCGGAACTCCAGTCGTGGTGGAAAGAACTCCGAGAAGAGGGTCATGGCGACAAGAAAGATGAGCCTTGGTGGCCTAAAATGCAGACTGTTGAAGAGCTAATAGAATCATGCACTATCATCATATGGACTGCTTCAGCTTACCATGCAGCAATCAATTTCGGGCAGTACCCTTATGGAGGATACCCTGCAAACCGTCCCAGCATAAGCCGGCGGTTCATGCCGAAGATAGGCACTCCTGAGTACGAGCAACTCAAGAAGAACCCCGAAAAGGCCTTCTTGGAAACAATTACACCTCAGCTGCAGACCCTTCTTGGCATGGCCTCCATTGAGATATTGTCAAGGCATTCAGCTGATGAGATTTACTTGGGGCAGAGAGAGAGTCAAGAATGGACAGCAGACACCAAGGTCTTGGAAGCGTCCGAGAATTTCAGAAGCAAGCTCAAAGCAGTTGGGGAAAGAGTGACAAAGATGAACAAGGATGACAAATTGAAGAACCGGACTGGACCGGCCAAGATGCCTTACACTTTACTCTATCCTTCCAGCGAACCTGGACTCACCGGAAAGGGAATCCCCAACAGTGTCTCAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00591 map00591
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

920

Amino Acids

103.34

Weight (kDa)

8.15

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 113 - 216 1.8e-18 PLAT/LH2 domain
Lipoxygenase PF00305 229 - 902 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2573
AccB1I GGYRCC 1 cut(s) 1228
AccB7I CCANNNNNTGG 3 cut(s) 842, 1610, 1935
AccI GTMKAC 1 cut(s) 1638
AccII CGCG 1 cut(s) 1867
AccIII TCCGGA 1 cut(s) 1194
AciI CCGC 6 cut(s) 894, 1340, 1614, 2015, 2047, 2380
AclI AACGTT 1 cut(s) 564
AclWI GGATC 4 cut(s) 425, 902, 1027, 2001
AcoI YGGCCR 3 cut(s) 155, 852, 2676
AcsI RAATTY 2 cut(s) 974, 2593
AcuI CTGAAG 3 cut(s) 740, 1238, 2286
AcyI GRCGYC 1 cut(s) 677
AdeI CACNNNGTG 2 cut(s) 2042, 2044
AfaI GTAC 7 cut(s) 611, 626, 1101, 1162, 1952, 2336, 2411
AfeI AGCGCT 1 cut(s) 2032
AflII CTTAAG 1 cut(s) 1103
AhlI ACTAGT 2 cut(s) 109, 2053
AjnI CCWGG 4 cut(s) 496, 1329, 1609, 2716
AloI GAACNNNNNNTCC 4 cut(s) 31, 63, 1968, 2000
Alw21I GWGCWC 4 cut(s) 70, 80, 194, 273
Alw26I GTCTC 8 cut(s) 139, 552, 668, 916, 960, 1169, 1331, 2755
AlwI GGATC 4 cut(s) 425, 902, 1027, 2001
AlwNI CAGNNNCTG 2 cut(s) 1036, 1737
Aor13HI TCCGGA 1 cut(s) 1194
Aor51HI AGCGCT 1 cut(s) 2032
AoxI GGCC 6 cut(s) 155, 852, 2240, 2439, 2487, 2676
ApeKI GCWGC 7 cut(s) 177, 398, 443, 1678, 2075, 2315, 2467
ApoI RAATTY 2 cut(s) 974, 2593
ArsI GACNNNNNNTTYG 6 cut(s) 229, 261, 649, 681, 959, 991
AseI ATTAAT 1 cut(s) 1881
Asp700I GAANNNNTTC 1 cut(s) 564
AspLEI GCGC 2 cut(s) 1867, 2033
AspS9I GGNCC 3 cut(s) 237, 1569, 2672
AsuC2I CCSGG 2 cut(s) 570, 1226
AsuHPI GGTGA 5 cut(s) 740, 830, 1217, 1796, 2716
AsuNHI GCTAGC 4 cut(s) 173, 1051, 1346, 1649
AvaII GGWCC 3 cut(s) 237, 1569, 2672
BanI GGYRCC 1 cut(s) 1228
BanII GRGCYC 3 cut(s) 70, 80, 273
BarI GAAGNNNNNNTAC 2 cut(s) 2117, 2149
Bbv12I GWGCWC 4 cut(s) 70, 80, 194, 273
BbvCI CCTCAGC 1 cut(s) 2463
BbvI GCAGC 7 cut(s) 189, 385, 455, 1690, 2062, 2327, 2454
BccI CCATC 4 cut(s) 1196, 1415, 1559, 2075
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 4 cut(s) 498, 1331, 1611, 2718
BciVI GTATCC 1 cut(s) 2342
BclI TGATCA 3 cut(s) 33, 1239, 1998
BcnI CCSGG 2 cut(s) 570, 1226
BcoDI GTCTC 8 cut(s) 139, 552, 668, 916, 960, 1169, 1331, 2755
BcuI ACTAGT 2 cut(s) 109, 2053
BfmI CTRYAG 1 cut(s) 2468
BfoI RGCGCY 1 cut(s) 2034
BfrI CTTAAG 1 cut(s) 1103
BfuI GTATCC 1 cut(s) 2342
BglI GCCNNNNNGGC 1 cut(s) 2239
BisI GCNGC 8 cut(s) 178, 399, 444, 894, 1679, 2076, 2316, 2468
BlsI GCNGC 8 cut(s) 179, 400, 445, 895, 1680, 2077, 2317, 2469
Bme1390I CCNGG 6 cut(s) 498, 570, 1226, 1331, 1611, 2718
Bme18I GGWCC 3 cut(s) 237, 1569, 2672
BmgT120I GGNCC 3 cut(s) 237, 1569, 2672
BmiI GGNNCC 3 cut(s) 238, 1230, 1570
BmrFI CCNGG 6 cut(s) 498, 570, 1226, 1331, 1611, 2718
BmsI GCATC 3 cut(s) 208, 1479, 2673
BmtI GCTAGC 4 cut(s) 177, 1055, 1350, 1653
BplI GAGNNNNNCTC 4 cut(s) 136, 168, 2114, 2146
BpmI CTGGAG 4 cut(s) 287, 1313, 1629, 2162
Bpu10I CCTNAGC 2 cut(s) 74, 2463
BpuEI CTTGAG 3 cut(s) 742, 1218, 2405
BpuMI CCSGG 2 cut(s) 570, 1226
Bsa29I ATCGAT 1 cut(s) 1022
BsaHI GRCGYC 1 cut(s) 677
BsaI GGTCTC 1 cut(s) 916
BsaJI CCNNGG 7 cut(s) 240, 280, 1654, 1929, 1989, 2234, 2571
BsaWI WCCGGW 3 cut(s) 1194, 2664, 2726
BsaXI ACNNNNNCTCC 6 cut(s) 31, 61, 1311, 1341, 1968, 1998
Bse118I RCCGGY 4 cut(s) 679, 1765, 2376, 2674
Bse1I ACTGG 7 cut(s) 528, 889, 1383, 1580, 1742, 2179, 2674
BseAI TCCGGA 1 cut(s) 1194
BseBI CCWGG 4 cut(s) 498, 1331, 1611, 2718
BseCI ATCGAT 1 cut(s) 1022
BseDI CCNNGG 7 cut(s) 240, 280, 1654, 1929, 1989, 2234, 2571
BseGI GGATG 3 cut(s) 484, 1825, 2653
BseMII CTCAG 6 cut(s) 65, 1043, 1441, 1725, 2397, 2477
BseNI ACTGG 7 cut(s) 528, 889, 1383, 1580, 1742, 2179, 2674
BseRI GAGGAG 4 cut(s) 18, 39, 1134, 1289
BseX3I CGGCCG 2 cut(s) 155, 852
BseXI GCAGC 7 cut(s) 189, 385, 455, 1690, 2062, 2327, 2454
BseYI CCCAGC 3 cut(s) 119, 1962, 2366
Bsh1236I CGCG 1 cut(s) 1867
Bsh1285I CGRYCG 3 cut(s) 158, 301, 855
BshFI GGCC 6 cut(s) 157, 854, 2242, 2441, 2489, 2678
BshNI GGYRCC 1 cut(s) 1228
BshVI ATCGAT 1 cut(s) 1022
BsiEI CGRYCG 3 cut(s) 158, 301, 855
BsiHKAI GWGCWC 4 cut(s) 70, 80, 194, 273
BslFI GGGAC 4 cut(s) 250, 779, 1582, 2349
BsmAI GTCTC 8 cut(s) 139, 552, 668, 916, 960, 1169, 1331, 2755
BsmBI CGTCTC 4 cut(s) 139, 668, 960, 1331
BsmFI GGGAC 4 cut(s) 250, 779, 1582, 2349
BsmI GAATGC 1 cut(s) 2512
BsnI GGCC 6 cut(s) 157, 854, 2242, 2441, 2489, 2678
Bso31I GGTCTC 1 cut(s) 916
Bsp1286I GDGCHC 4 cut(s) 70, 80, 194, 273
Bsp13I TCCGGA 1 cut(s) 1194
Bsp1407I TGTACA 1 cut(s) 1950
Bsp143I GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
Bsp19I CCATGG 1 cut(s) 1929
BspACI CCGC 6 cut(s) 894, 1340, 1614, 2015, 2047, 2380
BspANI GGCC 6 cut(s) 157, 854, 2242, 2441, 2489, 2678
BspCNI CTCAG 6 cut(s) 66, 1042, 1440, 1724, 2398, 2476
BspDI ATCGAT 1 cut(s) 1022
BspEI TCCGGA 1 cut(s) 1194
BspFNI CGCG 1 cut(s) 1867
BspHI TCATGA 1 cut(s) 307
BspLI GGNNCC 3 cut(s) 238, 1230, 1570
BspMAI CTGCAG 1 cut(s) 2472
BspOI GCTAGC 4 cut(s) 177, 1055, 1350, 1653
BspPI GGATC 4 cut(s) 425, 902, 1027, 2001
BspQI GCTCTTC 4 cut(s) 187, 702, 883, 2256
BspT107I GGYRCC 1 cut(s) 1228
BspTI CTTAAG 1 cut(s) 1103
BspTNI GGTCTC 1 cut(s) 916
BsrFI RCCGGY 4 cut(s) 679, 1765, 2376, 2674
BsrGI TGTACA 1 cut(s) 1950
BsrI ACTGG 7 cut(s) 528, 889, 1383, 1580, 1742, 2179, 2674
BssAI RCCGGY 4 cut(s) 679, 1765, 2376, 2674
BssECI CCNNGG 7 cut(s) 240, 280, 1654, 1929, 1989, 2234, 2571
BssMI GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
BssNI GRCGYC 1 cut(s) 677
BssT1I CCWWGG 5 cut(s) 1654, 1929, 1989, 2234, 2571
Bst2UI CCWGG 4 cut(s) 498, 1331, 1611, 2718
Bst4CI ACNGT 9 cut(s) 166, 241, 302, 1180, 1909, 2042, 2257, 2363, 2747
Bst6I CTCTTC 6 cut(s) 187, 702, 883, 2115, 2199, 2256
BstACI GRCGYC 1 cut(s) 677
BstAFI CTTAAG 1 cut(s) 1103
BstAPI GCANNNNNTGC 1 cut(s) 452
BstAUI TGTACA 1 cut(s) 1950
BstDEI CTNAG 6 cut(s) 74, 1029, 1427, 1711, 2406, 2463
BstDSI CCRYGG 2 cut(s) 240, 1929
BstENI CCTNNNNNAGG 1 cut(s) 2343
BstF5I GGATG 3 cut(s) 484, 1825, 2653
BstFNI CGCG 1 cut(s) 1867
BstH2I RGCGCY 1 cut(s) 2034
BstHHI GCGC 2 cut(s) 1867, 2033
BstKTI GATC 9 cut(s) 36, 152, 420, 910, 1035, 1242, 1378, 1996, 2001
BstMAI GTCTC 8 cut(s) 139, 552, 668, 916, 960, 1169, 1331, 2755
BstMBI GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
BstMCI CGRYCG 3 cut(s) 158, 301, 855
BstMWI GCNNNNNNNGC 6 cut(s) 452, 1697, 2239, 2248, 2312, 2386
BstNI CCWGG 4 cut(s) 498, 1331, 1611, 2718
BstNSI RCATGY 1 cut(s) 527
BstSCI CCNGG 6 cut(s) 496, 568, 1224, 1329, 1609, 2716
BstSFI CTRYAG 1 cut(s) 2468
BstUI CGCG 1 cut(s) 1867
BstV1I GCAGC 7 cut(s) 189, 385, 455, 1690, 2062, 2327, 2454
BstX2I RGATCY 4 cut(s) 417, 907, 1032, 1993
BstXI CCANNNNNNTGG 1 cut(s) 2578
BstYI RGATCY 4 cut(s) 417, 907, 1032, 1993
BstZI CGGCCG 2 cut(s) 155, 852
Bsu15I ATCGAT 1 cut(s) 1022
BsuI GTATCC 1 cut(s) 2342
BsuRI GGCC 6 cut(s) 157, 854, 2242, 2441, 2489, 2678
BsuTUI ATCGAT 1 cut(s) 1022
BtgI CCRYGG 2 cut(s) 240, 1929
BtsCI GGATG 3 cut(s) 484, 1825, 2653
BtsI GCAGTG 1 cut(s) 1761
BtsIMutI CAGTG 7 cut(s) 352, 357, 535, 1185, 1735, 1761, 2752
CaiI CAGNNNCTG 2 cut(s) 1036, 1737
CciI TCATGA 1 cut(s) 307
CfoI GCGC 2 cut(s) 1867, 2033
Cfr10I RCCGGY 4 cut(s) 679, 1765, 2376, 2674
Cfr13I GGNCC 3 cut(s) 237, 1569, 2672
ClaI ATCGAT 1 cut(s) 1022
CseI GACGC 2 cut(s) 685, 2574
Csp6I GTAC 7 cut(s) 610, 625, 1100, 1161, 1951, 2335, 2410
CspCI CAANNNNNGTGG 2 cut(s) 184, 219
CviQI GTAC 7 cut(s) 610, 625, 1100, 1161, 1951, 2335, 2410
DdeI CTNAG 6 cut(s) 74, 1029, 1427, 1711, 2406, 2463
DpnI GATC 9 cut(s) 35, 151, 419, 909, 1034, 1241, 1377, 1995, 2000
DpnII GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
DraIII CACNNNGTG 2 cut(s) 2042, 2044
DrdI GACNNNNNNGTC 1 cut(s) 2573
DseDI GACNNNNNNGTC 1 cut(s) 2573
EaeI YGGCCR 3 cut(s) 155, 852, 2676
EagI CGGCCG 2 cut(s) 155, 852
Eam1104I CTCTTC 6 cut(s) 187, 702, 883, 2115, 2199, 2256
EarI CTCTTC 6 cut(s) 187, 702, 883, 2115, 2199, 2256
EciI GGCGGA 2 cut(s) 1329, 1629
Ecl136II GAGCTC 3 cut(s) 68, 78, 271
EclXI CGGCCG 2 cut(s) 155, 852
Eco130I CCWWGG 5 cut(s) 1654, 1929, 1989, 2234, 2571
Eco147I AGGCCT 1 cut(s) 2441
Eco24I GRGCYC 3 cut(s) 70, 80, 273
Eco31I GGTCTC 1 cut(s) 916
Eco32I GATATC 1 cut(s) 1026
Eco47I GGWCC 3 cut(s) 237, 1569, 2672
Eco47III AGCGCT 1 cut(s) 2032
Eco52I CGGCCG 2 cut(s) 155, 852
Eco53kI GAGCTC 3 cut(s) 68, 78, 271
Eco57I CTGAAG 3 cut(s) 740, 1238, 2286
EcoICRI GAGCTC 3 cut(s) 68, 78, 271
EcoNI CCTNNNNNAGG 1 cut(s) 2343
EcoO109I RGGNCCY 1 cut(s) 1569
EcoRII CCWGG 4 cut(s) 496, 1329, 1609, 2716
EcoRV GATATC 1 cut(s) 1026
EcoT14I CCWWGG 5 cut(s) 1654, 1929, 1989, 2234, 2571
EcoT38I GRGCYC 3 cut(s) 70, 80, 273
ErhI CCWWGG 5 cut(s) 1654, 1929, 1989, 2234, 2571
Esp3I CGTCTC 4 cut(s) 139, 668, 960, 1331
FalI AAGNNNNNCTT 4 cut(s) 1086, 1118, 2429, 2461
FaqI GGGAC 4 cut(s) 250, 779, 1582, 2349
FauNDI CATATG 3 cut(s) 1009, 2071, 2291
FbaI TGATCA 3 cut(s) 33, 1239, 1998
FblI GTMKAC 1 cut(s) 1638
Fnu4HI GCNGC 8 cut(s) 178, 399, 444, 894, 1679, 2076, 2316, 2468
FokI GGATG 3 cut(s) 491, 1812, 2660
FriOI GRGCYC 3 cut(s) 70, 80, 273
Fsp4HI GCNGC 8 cut(s) 178, 399, 444, 894, 1679, 2076, 2316, 2468
GlaI GCGC 2 cut(s) 1866, 2032
GluI GCNGC 8 cut(s) 178, 399, 444, 894, 1679, 2076, 2316, 2468
GsaI CCCAGC 3 cut(s) 123, 1966, 2370
GsuI CTGGAG 4 cut(s) 287, 1313, 1629, 2162
HaeII RGCGCY 1 cut(s) 2034
HaeIII GGCC 6 cut(s) 157, 854, 2242, 2441, 2489, 2678
HgaI GACGC 2 cut(s) 685, 2574
HhaI GCGC 2 cut(s) 1867, 2033
Hin1I GRCGYC 1 cut(s) 677
Hin6I GCGC 2 cut(s) 1865, 2031
HinP1I GCGC 2 cut(s) 1865, 2031
HincII GTYRAC 2 cut(s) 162, 355
HindII GTYRAC 2 cut(s) 162, 355
HindIII AAGCTT 2 cut(s) 1689, 1817
HphI GGTGA 5 cut(s) 740, 830, 1217, 1796, 2716
Hpy166II GTNNAC 8 cut(s) 59, 162, 355, 586, 610, 1208, 1639, 1855
Hpy8I GTNNAC 8 cut(s) 59, 162, 355, 586, 610, 1208, 1639, 1855
HpyAV CCTTC 8 cut(s) 388, 867, 1109, 1177, 2143, 2452, 2486, 2715
HpyCH4III ACNGT 9 cut(s) 166, 241, 302, 1180, 1909, 2042, 2257, 2363, 2747
HpyCH4IV ACGT 2 cut(s) 564, 659
HpyF10VI GCNNNNNNNGC 6 cut(s) 452, 1697, 2239, 2248, 2312, 2386
HpyF3I CTNAG 6 cut(s) 74, 1029, 1427, 1711, 2406, 2463
HpySE526I ACGT 2 cut(s) 564, 659
Hsp92I GRCGYC 1 cut(s) 677
HspAI GCGC 2 cut(s) 1865, 2031
Kpn2I TCCGGA 1 cut(s) 1194
KroI GCCGGC 1 cut(s) 2376
KroNI GCCGGC 1 cut(s) 2378
Ksp22I TGATCA 3 cut(s) 33, 1239, 1998
Kzo9I GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
LguI GCTCTTC 4 cut(s) 187, 702, 883, 2256
LmnI GCTCC 6 cut(s) 65, 268, 284, 500, 1501, 2135
Lsp1109I GCAGC 7 cut(s) 189, 385, 455, 1690, 2062, 2327, 2454
LweI GCATC 3 cut(s) 208, 1479, 2673
MaeII ACGT 2 cut(s) 564, 659
MaeIII GTNAC 7 cut(s) 427, 715, 980, 1667, 1838, 2049, 2629
MalI GATC 9 cut(s) 35, 151, 419, 909, 1034, 1241, 1377, 1995, 2000
MboI GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
MflI RGATCY 4 cut(s) 417, 907, 1032, 1993
MhlI GDGCHC 4 cut(s) 70, 80, 194, 273
MlyI GAGTC 7 cut(s) 814, 1419, 1675, 1703, 2162, 2557, 2715
MmeI TCCRAC 1 cut(s) 664
MroI TCCGGA 1 cut(s) 1194
MroNI GCCGGC 1 cut(s) 2376
MroXI GAANNNNTTC 1 cut(s) 564
MseI TTAA 7 cut(s) 459, 465, 741, 939, 1104, 1145, 1881
MslI CAYNNNNRTG 2 cut(s) 528, 1836
MspA1I CMGCKG 5 cut(s) 86, 119, 1962, 2467, 2519
MspCI CTTAAG 1 cut(s) 1103
MspR9I CCNGG 6 cut(s) 498, 570, 1226, 1331, 1611, 2718
Mva1269I GAATGC 1 cut(s) 2512
MvaI CCWGG 4 cut(s) 498, 1331, 1611, 2718
MvnI CGCG 1 cut(s) 1867
MwoI GCNNNNNNNGC 6 cut(s) 452, 1697, 2239, 2248, 2312, 2386
NaeI GCCGGC 1 cut(s) 2378
NciI CCSGG 2 cut(s) 570, 1226
NcoI CCATGG 1 cut(s) 1929
NdeI CATATG 3 cut(s) 1009, 2071, 2291
NdeII GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
NgoMIV GCCGGC 1 cut(s) 2376
NheI GCTAGC 4 cut(s) 173, 1051, 1346, 1649
NlaIV GGNNCC 3 cut(s) 238, 1230, 1570
NmeAIII GCCGAG 3 cut(s) 133, 880, 1198
NmuCI GTSAC 5 cut(s) 715, 980, 1667, 1838, 2629
NspI RCATGY 1 cut(s) 527
PagI TCATGA 1 cut(s) 307
PceI AGGCCT 1 cut(s) 2441
PciSI GCTCTTC 4 cut(s) 187, 702, 883, 2256
PcsI WCGNNNNNNNCGW 1 cut(s) 665
PctI GAATGC 1 cut(s) 2512
PdiI GCCGGC 1 cut(s) 2378
PdmI GAANNNNTTC 1 cut(s) 564
PfeI GAWTC 7 cut(s) 259, 376, 1481, 1873, 2024, 2273, 2736
PflFI GACNNNGTC 1 cut(s) 166
PflMI CCANNNNNTGG 3 cut(s) 842, 1610, 1935
PfoI TCCNGGA 2 cut(s) 568, 1329
PkrI GCNGC 8 cut(s) 179, 400, 445, 895, 1680, 2077, 2317, 2469
PleI GAGTC 7 cut(s) 813, 1419, 1674, 1703, 2162, 2556, 2715
PpsI GAGTC 7 cut(s) 813, 1419, 1674, 1703, 2162, 2556, 2715
PpuMI RGGWCCY 1 cut(s) 1569
PshBI ATTAAT 1 cut(s) 1881
Psp124BI GAGCTC 3 cut(s) 70, 80, 273
Psp1406I AACGTT 1 cut(s) 564
Psp5II RGGWCCY 1 cut(s) 1569
Psp6I CCWGG 4 cut(s) 496, 1329, 1609, 2716
PspFI CCCAGC 3 cut(s) 119, 1962, 2366
PspGI CCWGG 4 cut(s) 496, 1329, 1609, 2716
PspN4I GGNNCC 3 cut(s) 238, 1230, 1570
PspPI GGNCC 3 cut(s) 237, 1569, 2672
PspPPI RGGWCCY 1 cut(s) 1569
PstI CTGCAG 1 cut(s) 2472
PstNI CAGNNNCTG 2 cut(s) 1036, 1737
PsuI RGATCY 4 cut(s) 417, 907, 1032, 1993
PsyI GACNNNGTC 1 cut(s) 166
PvuII CAGCTG 5 cut(s) 86, 119, 1962, 2467, 2519
RsaI GTAC 7 cut(s) 611, 626, 1101, 1162, 1952, 2336, 2411
RsaNI GTAC 7 cut(s) 610, 625, 1100, 1161, 1951, 2335, 2410
RseI CAYNNNNRTG 2 cut(s) 528, 1836
SacI GAGCTC 3 cut(s) 70, 80, 273
SapI GCTCTTC 4 cut(s) 187, 702, 883, 2256
SaqAI TTAA 7 cut(s) 459, 465, 741, 939, 1104, 1145, 1881
SatI GCNGC 8 cut(s) 178, 399, 444, 894, 1679, 2076, 2316, 2468
Sau3AI GATC 9 cut(s) 33, 149, 417, 907, 1032, 1239, 1375, 1993, 1998
Sau96I GGNCC 3 cut(s) 237, 1569, 2672
SchI GAGTC 7 cut(s) 814, 1419, 1675, 1703, 2162, 2557, 2715
ScrFI CCNGG 6 cut(s) 498, 570, 1226, 1331, 1611, 2718
SduI GDGCHC 4 cut(s) 70, 80, 194, 273
SfaNI GCATC 3 cut(s) 208, 1479, 2673
SfcI CTRYAG 1 cut(s) 2468
SinI GGWCC 3 cut(s) 237, 1569, 2672
SmiMI CAYNNNNRTG 2 cut(s) 528, 1836
SmlI CTYRAG 4 cut(s) 721, 1103, 1233, 2420
SmoI CTYRAG 4 cut(s) 721, 1103, 1233, 2420
SpeI ACTAGT 2 cut(s) 109, 2053
SseBI AGGCCT 1 cut(s) 2441
SsiI CCGC 6 cut(s) 894, 1340, 1614, 2015, 2047, 2380
SspI AATATT 1 cut(s) 1925
SstI GAGCTC 3 cut(s) 70, 80, 273
StuI AGGCCT 1 cut(s) 2441
StyD4I CCNGG 6 cut(s) 496, 568, 1224, 1329, 1609, 2716
StyI CCWWGG 5 cut(s) 1654, 1929, 1989, 2234, 2571
TaaI ACNGT 9 cut(s) 166, 241, 302, 1180, 1909, 2042, 2257, 2363, 2747
TaiI ACGT 2 cut(s) 567, 662
TaqI TCGA 5 cut(s) 297, 379, 668, 871, 1022
TatI WGTACW 3 cut(s) 624, 1099, 1950
TauI GCSGC 1 cut(s) 896
TfiI GAWTC 7 cut(s) 259, 376, 1481, 1873, 2024, 2273, 2736
Tru1I TTAA 7 cut(s) 459, 465, 741, 939, 1104, 1145, 1881
Tru9I TTAA 7 cut(s) 459, 465, 741, 939, 1104, 1145, 1881
TscAI CASTG 7 cut(s) 352, 364, 535, 1185, 1742, 1761, 2752
TseFI GTSAC 5 cut(s) 715, 980, 1667, 1838, 2629
TseI GCWGC 7 cut(s) 177, 398, 443, 1678, 2075, 2315, 2467
Tsp45I GTSAC 5 cut(s) 715, 980, 1667, 1838, 2629
TspRI CASTG 7 cut(s) 352, 364, 535, 1185, 1742, 1761, 2752
Tth111I GACNNNGTC 1 cut(s) 166
Van91I CCANNNNNTGG 3 cut(s) 842, 1610, 1935
Vha464I CTTAAG 1 cut(s) 1103
VpaK11BI GGWCC 3 cut(s) 237, 1569, 2672
VspI ATTAAT 1 cut(s) 1881
XagI CCTNNNNNAGG 1 cut(s) 2343
XapI RAATTY 2 cut(s) 974, 2593
XceI RCATGY 1 cut(s) 527
XcmI CCANNNNNNNNNTGG 1 cut(s) 1693
XmiI GTMKAC 1 cut(s) 1638
XmnI GAANNNNTTC 1 cut(s) 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.