pycom12g20380

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
21918167 .. 21922253
4087 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g20380.6

Sequence Viewer

Length: 2787 bp
ATGCTTCATGTTCTTCTCAAGCAACTCAGTCCTCTTAGCTCAGTTGTTGTTGCAGCAGCAACAACCAACAATCGAGATCGTTCCACGTCGGTCATTGGCAGACCAGGGTTGCTTCAAACGACTGATCCCATGAAAGTATTCCCAGCTGGTGTCTTGTGCATGACTGATGTGGCACGATCTCAGCCTTTGACTGTGGTTTCATCAGCTGCAAAGCCATCCCAGACCATCAACGTTGATTATCGCCAGAAAACTGGGGAGAAGAAACTCCGAGGGACAGTGGTGTTGATGAAGAAGAACGTTTTGGAGCTCAACGACCTCAAAGCTTCAGTTCTTGATCGTTTCGATGAGCTGCGGGGTAAAAGAGTTTTACTGCAGCTCATCAGTTCTGTTAATTGTGACCCTGAAAATGGGTCGCAAGGAAAAGTTGGAAGGCCGGCATATTTGGAAGATTGGATTACCAAAATCACTTCTTTAACAGCAGAGGAGACTGCATTTGATGTTACTTTCGATTGGGACGAGGAGATTGGAGTCCCGGGAGCATTCATAATCCGAAATGAGCATCACAATGAGTTCTACTTGAAGTCTCTCACACTCGAAGATGTTCCTGGTGAAGGTCGAGTCCACTTTGTTTGCAACTCATGGGTGTACCCTGCCGAAAAGTACAGAAAAGACCGCGTTTTCTTCGCTAACAAGACGTATCTTTCAAGTGATACGCCAGTGCCATTACAGAAATTCAGAGAAGAAGAGCTCAAGAACTTGAGAGGAGACGACGATGATGAAAATAGAGAGCTTCAGGAATGGGACAGAGTTTATGGCTATGCTTACTATGATGATTTGGGCAAACCATGTATGGGTAAAGAATATGCGCGTCCAACTCTCGGAGGGTCTAGTGATTTTCCTTATCCTCGCAGAGTTAAAATCGGAAGACAAACAACTGCAAATGCGAGCCCCATGATGCTTCCCGTGAACATATTTGTGTACGTTCCCAGAGACGAAAGATTTGGCCACTTAAAGACGTCAGACGCAATTGCTTATGCCCTGAAATCGTTATCTCAGCTAGTTAAGCCTGATGAGCTAGCAACTCTAGTTGCCTCACAAAACGAGTTTGGAAGCTTGAAAGATGTACTTAAACTCTACGAAGGAGGAATACGGTTGCCCGAGTTTTTACAGAAATCTGTTAGGGATAACATCCCTTTAGAGACAATCAAGGAACTTTTCCGACCTGATGGTGAAAATTTCCTCAAGTTCCCAGTGCCTCAAGTGATCAAAGAGGATAAATCAGCATGGAGAGCTGATGAAGAATTTGCAAGAGAAATGCTGGCAGGAATAAATCCTGTTACAATTCGTCGTCTCAAAGAGTTTCCGCCTGCTAGCAAACTAGATCGAAAAGCACATGGGGATCAAACTAGTCTAATAACCAAAGAAAACATAGCTCATAACTTAAAAGGACTCAGCATAGACCAGGCAATCGATGAAAACAGGTTATTCATATTAGACCACCATGATTCAATAATGCCGTACCTGAAGCGCATAAACACAACTTCAACGAAAACATATGCAAGCAGGACACTCCTCTTCTTACAAGATGACGGGACTTTGAAGCCATTAGCTATTGAATTAAGCTTGCCGCATCCCAACGGAGATCAATTTGGTTGCACTGGCAAAGTCTATACTCCCTCTAGCCAAGGCGTCGAGAGTTCCATTTGGCAACTTGCTAAAGCTTACGTGGCTGTGAATGATACTGGTTATCATCAGCTCATCAGTCACTGGTTGAGAACTCACGCAGTGATGGAGCCATTTATTATAGCAACAAATAGGCAGTTGAGCGTGCTTCACCCGATTTATAAACTTCTGCATCCTCACTTTCGTGACAATATGAATGTAAATGCACTCGCTAGACGGGTCCTCATTAACGCTTGTGGAATAATAGAAAAAACGGTCTTTCCTGCAAAGTTTTCAATGGAATGGTCGTCTGCAATGTATAAGAATTGGGTTTTTCCTGAACAAGCACTCCCCGCAGATCTGATTAAAAGAGGAATGGCAGTTGAAGATTCAAGCTCCTCTCATGGTGTGCGCTTACTGATAGAGGACTATCCATATGCTGCAGACGGGCTTGAGATATGGTCTGCAATTAAAACATGGGTTAAAGACTACTGCTCCTTCTACTATAAAACTGACGAAACTGTCCAAAAGGACTCGGAACTCCAGTCCTGGTGGAAGGAACTCCACGAGGAAGGTCACGGTGACAAGAAAGATGAGCCCTGGTGGCCAAAAATGCAAACTCGCGAAGAGCTGATAGAATTGTGCACCATTATCATATGGATTGCTTCAGCCTATCATGCAGCAATCAATTTTGGGCAGTACCCTTATGGTGGATACCCCCCAAACCGACCAAGCACAAGCAGGCGATTCATGCCTGAAGAAGGCACTCCTGAATACGAGGAGCTCAAGACAAACCCCGAGAAGGCATTTTTGAAAACATTCGCACCGGAGCGGCAGACCCTTCTTGGCATGGCCACAATCGAAATCTTATCAAGGCATACGGTTGATGAGGTTTATTTGGGGCATAGAGACGCCGCAGAATGGACAACGGACGCAGACATATTGCAAGCTTCTAAAAATTTCAGAAAGAAGCTGGAAGAAATTGAGGAATGCATAAAGAGAAAGAACAAGGATAAGAGATTGAAGAACCGTTCTGGACCGGCCAAGATGCCATATACACTGCTTTATCCTTCGAGTGATCCCGGAATTACTGGCAAGGGAATTCCCAACAGTGTCTCAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

929

Amino Acids

105.57

Weight (kDa)

6.55

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1845
AasI GACNNNNNNGTC 1 cut(s) 2183
AatII GACGTC 1 cut(s) 1019
AccBSI CCGCTC 1 cut(s) 2494
AccII CGCG 3 cut(s) 675, 868, 2286
AciI CCGC 7 cut(s) 352, 673, 1364, 1628, 2016, 2494, 2577
AclI AACGTT 2 cut(s) 231, 297
AclWI GGATC 3 cut(s) 119, 1407, 2735
AcoI YGGCCR 4 cut(s) 1003, 2267, 2514, 2703
AcsI RAATTY 5 cut(s) 731, 1234, 1301, 2620, 2763
AcuI CTGAAG 5 cut(s) 309, 776, 1544, 2313, 2439
AcyI GRCGYC 3 cut(s) 1016, 1689, 2574
AdeI CACNNNGTG 1 cut(s) 1786
AfaI GTAC 6 cut(s) 647, 662, 980, 1125, 1520, 2363
AfiI CCNNNNNNNGG 8 cut(s) 407, 611, 851, 878, 2372, 2423, 2464, 2583
AhlI ACTAGT 1 cut(s) 1406
AjiI CACGTC 1 cut(s) 87
AjnI CCWGG 5 cut(s) 103, 604, 1461, 2210, 2261
AjuI GAANNNNNNNTTGG 2 cut(s) 284, 316
AleI CACNNNNGTG 1 cut(s) 1866
AloI GAACNNNNNNTCC 2 cut(s) 1995, 2027
Alw21I GWGCWC 4 cut(s) 309, 750, 2309, 2448
Alw26I GTCTC 8 cut(s) 479, 588, 759, 984, 1193, 1355, 2565, 2782
Alw44I GTGCAC 1 cut(s) 2305
AlwI GGATC 3 cut(s) 119, 1407, 2735
AlwNI CAGNNNCTG 1 cut(s) 1767
Ama87I CYCGRG 3 cut(s) 532, 1157, 2459
AoxI GGCC 5 cut(s) 431, 1003, 2267, 2514, 2703
ApaLI GTGCAC 1 cut(s) 2305
ApeKI GCWGC 7 cut(s) 53, 56, 206, 349, 373, 2102, 2342
ApoI RAATTY 5 cut(s) 731, 1234, 1301, 2620, 2763
ArsI GACNNNNNNTTYG 2 cut(s) 983, 1015
Asp700I GAANNNNTTC 3 cut(s) 137, 600, 2480
AspLEI GCGC 3 cut(s) 868, 1530, 2076
AspS9I GGNCC 2 cut(s) 1903, 2699
AsuC2I CCSGG 3 cut(s) 533, 534, 2745
AsuHPI GGTGA 4 cut(s) 620, 1241, 1826, 2255
AsuNHI GCTAGC 2 cut(s) 1075, 1370
AvaI CYCGRG 3 cut(s) 532, 1157, 2459
AvaII GGWCC 2 cut(s) 1903, 2699
BaeGI GKGCMC 1 cut(s) 2309
BaeI ACNNNNGTAYC 2 cut(s) 702, 735
BalI TGGCCA 3 cut(s) 1005, 2269, 2516
BanII GRGCYC 5 cut(s) 309, 750, 950, 2262, 2448
BarI GAAGNNNNNNTAC 2 cut(s) 1131, 1163
BauI CACGAG 1 cut(s) 2228
BbsI GAAGAC 1 cut(s) 931
Bbv12I GWGCWC 4 cut(s) 309, 750, 2309, 2448
BbvI GCAGC 7 cut(s) 65, 68, 193, 336, 385, 2089, 2354
BccI CCATC 4 cut(s) 223, 233, 1220, 1783
BceAI ACGGC 1 cut(s) 1501
BciT130I CCWGG 5 cut(s) 105, 606, 1463, 2212, 2263
BciVI GTATCC 1 cut(s) 2369
BclI TGATCA 1 cut(s) 1263
BcnI CCSGG 3 cut(s) 533, 534, 2745
BcoDI GTCTC 8 cut(s) 479, 588, 759, 984, 1193, 1355, 2565, 2782
BcuI ACTAGT 1 cut(s) 1406
BfaI CTAG 9 cut(s) 888, 1058, 1076, 1085, 1371, 1379, 1407, 1680, 1896
BfmI CTRYAG 2 cut(s) 371, 2103
BfuI GTATCC 1 cut(s) 2369
BglI GCCNNNNNGGC 1 cut(s) 2266
BglII AGATCT 1 cut(s) 2020
Bme1390I CCNGG 8 cut(s) 105, 533, 534, 606, 1463, 2212, 2263, 2745
Bme18I GGWCC 2 cut(s) 1903, 2699
BmeT110I CYCGRG 3 cut(s) 532, 1157, 2459
BmgBI CACGTC 1 cut(s) 87
BmgT120I GGNCC 2 cut(s) 1903, 2699
BmiI GGNNCC 2 cut(s) 1794, 1904
BmrFI CCNGG 8 cut(s) 105, 533, 534, 606, 1463, 2212, 2263, 2745
BmrI ACTGGG 2 cut(s) 261, 1244
BmsI GCATC 5 cut(s) 568, 945, 1639, 1864, 2700
BmtI GCTAGC 2 cut(s) 1079, 1374
BmuI ACTGGG 2 cut(s) 261, 1244
BpiI GAAGAC 1 cut(s) 931
BpmI CTGGAG 1 cut(s) 2189
BpuEI CTTGAG 6 cut(s) 734, 778, 1226, 1242, 2135, 2432
BpuMI CCSGG 3 cut(s) 533, 534, 2745
Bsa29I ATCGAT 1 cut(s) 1470
BsaAI YACGTR 1 cut(s) 1726
BsaHI GRCGYC 3 cut(s) 1016, 1689, 2574
BsaJI CCNNGG 5 cut(s) 104, 268, 532, 1684, 2261
BsaWI WCCGGW 1 cut(s) 2488
BsaXI ACNNNNNCTCC 4 cut(s) 1995, 2025, 2141, 2171
Bsc4I CCNNNNNNNGG 8 cut(s) 407, 611, 851, 878, 2372, 2423, 2464, 2583
Bse118I RCCGGY 2 cut(s) 433, 2701
Bse1I ACTGG 8 cut(s) 256, 716, 1250, 1663, 1747, 1772, 2206, 2758
Bse3DI GCAATG 1 cut(s) 1983
BseBI CCWGG 5 cut(s) 105, 606, 1463, 2212, 2263
BseCI ATCGAT 1 cut(s) 1470
BseDI CCNNGG 5 cut(s) 104, 268, 532, 1684, 2261
BseGI GGATG 4 cut(s) 215, 1188, 1630, 1855
BseLI CCNNNNNNNGG 8 cut(s) 407, 611, 851, 878, 2372, 2423, 2464, 2583
BseMI GCAATG 1 cut(s) 1983
BseMII CTCAG 5 cut(s) 40, 54, 194, 1067, 1465
BseNI ACTGG 8 cut(s) 256, 716, 1250, 1663, 1747, 1772, 2206, 2758
BseRI GAGGAG 6 cut(s) 497, 533, 777, 1562, 2050, 2456
BseSI GKGCMC 1 cut(s) 2309
BseXI GCAGC 7 cut(s) 65, 68, 193, 336, 385, 2089, 2354
BseYI CCCAGC 1 cut(s) 142
Bsh1236I CGCG 3 cut(s) 675, 868, 2286
BshFI GGCC 5 cut(s) 433, 1005, 2269, 2516, 2705
BshVI ATCGAT 1 cut(s) 1470
BsiHKAI GWGCWC 4 cut(s) 309, 750, 2309, 2448
BsiHKCI CYCGRG 3 cut(s) 532, 1157, 2459
BsiSI CCGG 5 cut(s) 434, 533, 2489, 2702, 2745
BslFI GGGAC 5 cut(s) 286, 515, 527, 815, 1606
BslI CCNNNNNNNGG 8 cut(s) 407, 611, 851, 878, 2372, 2423, 2464, 2583
BsmAI GTCTC 8 cut(s) 479, 588, 759, 984, 1193, 1355, 2565, 2782
BsmBI CGTCTC 4 cut(s) 759, 984, 1355, 2565
BsmFI GGGAC 5 cut(s) 286, 515, 527, 815, 1606
BsmI GAATGC 2 cut(s) 539, 2657
BsnI GGCC 5 cut(s) 433, 1005, 2269, 2516, 2705
BsoBI CYCGRG 3 cut(s) 532, 1157, 2459
Bsp1286I GDGCHC 6 cut(s) 309, 750, 950, 2262, 2309, 2448
Bsp68I TCGCGA 1 cut(s) 2286
BspACI CCGC 7 cut(s) 352, 673, 1364, 1628, 2016, 2494, 2577
BspANI GGCC 5 cut(s) 433, 1005, 2269, 2516, 2705
BspCNI CTCAG 5 cut(s) 39, 53, 193, 1066, 1464
BspDI ATCGAT 1 cut(s) 1470
BspFNI CGCG 3 cut(s) 675, 868, 2286
BspLI GGNNCC 2 cut(s) 1794, 1904
BspMAI CTGCAG 2 cut(s) 375, 2107
BspOI GCTAGC 2 cut(s) 1079, 1374
BspPI GGATC 3 cut(s) 119, 1407, 2735
BspQI GCTCTTC 2 cut(s) 738, 2283
BsrBI CCGCTC 1 cut(s) 2494
BsrDI GCAATG 1 cut(s) 1983
BsrFI RCCGGY 2 cut(s) 433, 2701
BsrI ACTGG 8 cut(s) 256, 716, 1250, 1663, 1747, 1772, 2206, 2758
BssAI RCCGGY 2 cut(s) 433, 2701
BssECI CCNNGG 5 cut(s) 104, 268, 532, 1684, 2261
BssNI GRCGYC 3 cut(s) 1016, 1689, 2574
BssSI CACGAG 1 cut(s) 2228
BssT1I CCWWGG 1 cut(s) 1684
Bst2BI CACGAG 1 cut(s) 2228
Bst2UI CCWGG 5 cut(s) 105, 606, 1463, 2212, 2263
Bst4CI ACNGT 9 cut(s) 193, 277, 1152, 1939, 2185, 2243, 2545, 2693, 2774
Bst6I CTCTTC 3 cut(s) 738, 1580, 2283
BstACI GRCGYC 3 cut(s) 1016, 1689, 2574
BstBAI YACGTR 1 cut(s) 1726
BstDEI CTNAG 6 cut(s) 26, 35, 40, 180, 1053, 1451
BstENI CCTNNNNNAGG 2 cut(s) 609, 2421
BstF5I GGATG 4 cut(s) 215, 1188, 1630, 1855
BstFNI CGCG 3 cut(s) 675, 868, 2286
BstHHI GCGC 3 cut(s) 868, 1530, 2076
BstMAI GTCTC 8 cut(s) 479, 588, 759, 984, 1193, 1355, 2565, 2782
BstMWI GCNNNNNNNGC 9 cut(s) 1063, 1072, 1289, 1727, 2015, 2266, 2275, 2339, 2413
BstNI CCWGG 5 cut(s) 105, 606, 1463, 2212, 2263
BstSCI CCNGG 8 cut(s) 103, 531, 532, 604, 1461, 2210, 2261, 2743
BstSFI CTRYAG 2 cut(s) 371, 2103
BstSLI GKGCMC 1 cut(s) 2309
BstUI CGCG 3 cut(s) 675, 868, 2286
BstV1I GCAGC 7 cut(s) 65, 68, 193, 336, 385, 2089, 2354
BstV2I GAAGAC 1 cut(s) 931
BstX2I RGATCY 1 cut(s) 2020
BstXI CCANNNNNNTGG 1 cut(s) 251
BstYI RGATCY 1 cut(s) 2020
Bsu15I ATCGAT 1 cut(s) 1470
BsuI GTATCC 1 cut(s) 2369
BsuRI GGCC 5 cut(s) 433, 1005, 2269, 2516, 2705
BsuTUI ATCGAT 1 cut(s) 1470
BtrI CACGTC 1 cut(s) 87
BtsCI GGATG 4 cut(s) 215, 1188, 1630, 1855
BtsI GCAGTG 2 cut(s) 1791, 2720
BtsIMutI CAGTG 8 cut(s) 282, 723, 1257, 1656, 1765, 1791, 2720, 2779
BtuMI TCGCGA 1 cut(s) 2286
CaiI CAGNNNCTG 1 cut(s) 1767
CfoI GCGC 3 cut(s) 868, 1530, 2076
Cfr10I RCCGGY 2 cut(s) 433, 2701
Cfr13I GGNCC 2 cut(s) 1903, 2699
Cfr9I CCCGGG 1 cut(s) 532
ClaI ATCGAT 1 cut(s) 1470
CseI GACGC 5 cut(s) 857, 1031, 1678, 2582, 2603
Csp6I GTAC 6 cut(s) 646, 661, 979, 1124, 1519, 2362
CspCI CAANNNNNGTGG 2 cut(s) 611, 646
CviQI GTAC 6 cut(s) 646, 661, 979, 1124, 1519, 2362
DdeI CTNAG 6 cut(s) 26, 35, 40, 180, 1053, 1451
DraIII CACNNNGTG 1 cut(s) 1786
DrdI GACNNNNNNGTC 1 cut(s) 2183
DseDI GACNNNNNNGTC 1 cut(s) 2183
EaeI YGGCCR 4 cut(s) 1003, 2267, 2514, 2703
Eam1104I CTCTTC 3 cut(s) 738, 1580, 2283
EarI CTCTTC 3 cut(s) 738, 1580, 2283
EciI GGCGGA 1 cut(s) 1353
Ecl136II GAGCTC 3 cut(s) 307, 748, 2446
Eco130I CCWWGG 1 cut(s) 1684
Eco24I GRGCYC 5 cut(s) 309, 750, 950, 2262, 2448
Eco47I GGWCC 2 cut(s) 1903, 2699
Eco53kI GAGCTC 3 cut(s) 307, 748, 2446
Eco57I CTGAAG 5 cut(s) 309, 776, 1544, 2313, 2439
Eco88I CYCGRG 3 cut(s) 532, 1157, 2459
EcoICRI GAGCTC 3 cut(s) 307, 748, 2446
EcoNI CCTNNNNNAGG 2 cut(s) 609, 2421
EcoO109I RGGNCCY 1 cut(s) 1903
EcoRI GAATTC 1 cut(s) 2763
EcoRII CCWGG 5 cut(s) 103, 604, 1461, 2210, 2261
EcoT14I CCWWGG 1 cut(s) 1684
EcoT22I ATGCAT 1 cut(s) 2657
EcoT38I GRGCYC 5 cut(s) 309, 750, 950, 2262, 2448
ErhI CCWWGG 1 cut(s) 1684
Esp3I CGTCTC 4 cut(s) 759, 984, 1355, 2565
FalI AAGNNNNNCTT 2 cut(s) 1110, 1142
FaqI GGGAC 5 cut(s) 286, 515, 527, 815, 1606
FauI CCCGC 2 cut(s) 345, 2023
FauNDI CATATG 3 cut(s) 1555, 2098, 2318
FbaI TGATCA 1 cut(s) 1263
FokI GGATG 4 cut(s) 202, 1175, 1617, 1842
FriOI GRGCYC 5 cut(s) 309, 750, 950, 2262, 2448
FspBI CTAG 9 cut(s) 888, 1058, 1076, 1085, 1371, 1379, 1407, 1680, 1896
GlaI GCGC 3 cut(s) 867, 1529, 2075
GsaI CCCAGC 1 cut(s) 146
GsuI CTGGAG 1 cut(s) 2189
HaeIII GGCC 5 cut(s) 433, 1005, 2269, 2516, 2705
HapII CCGG 5 cut(s) 434, 533, 2489, 2702, 2745
HgaI GACGC 5 cut(s) 857, 1031, 1678, 2582, 2603
HhaI GCGC 3 cut(s) 868, 1530, 2076
Hin1I GRCGYC 3 cut(s) 1016, 1689, 2574
Hin6I GCGC 3 cut(s) 866, 1528, 2074
HinP1I GCGC 3 cut(s) 866, 1528, 2074
HindIII AAGCTT 5 cut(s) 321, 1111, 1621, 1719, 2610
HinfI GANTC 7 cut(s) 528, 618, 1449, 1505, 2051, 2195, 2409
HpaII CCGG 5 cut(s) 434, 533, 2489, 2702, 2745
HphI GGTGA 4 cut(s) 620, 1241, 1826, 2255
Hpy166II GTNNAC 5 cut(s) 622, 646, 967, 979, 2307
Hpy8I GTNNAC 5 cut(s) 622, 646, 967, 979, 2307
Hpy99I CGWCG 4 cut(s) 91, 773, 1350, 1694
HpyCH4III ACNGT 9 cut(s) 193, 277, 1152, 1939, 2185, 2243, 2545, 2693, 2774
HpyCH4IV ACGT 7 cut(s) 86, 231, 297, 695, 981, 1016, 1725
HpyF10VI GCNNNNNNNGC 9 cut(s) 1063, 1072, 1289, 1727, 2015, 2266, 2275, 2339, 2413
HpyF3I CTNAG 6 cut(s) 26, 35, 40, 180, 1053, 1451
HpySE526I ACGT 7 cut(s) 86, 231, 297, 695, 981, 1016, 1725
Hsp92I GRCGYC 3 cut(s) 1016, 1689, 2574
HspAI GCGC 3 cut(s) 866, 1528, 2074
KroI GCCGGC 1 cut(s) 433
KroNI GCCGGC 1 cut(s) 435
Ksp22I TGATCA 1 cut(s) 1263
LguI GCTCTTC 2 cut(s) 738, 2283
LmnI GCTCC 7 cut(s) 304, 536, 1792, 2063, 2162, 2443, 2491
Lsp1109I GCAGC 7 cut(s) 65, 68, 193, 336, 385, 2089, 2354
LweI GCATC 5 cut(s) 568, 945, 1639, 1864, 2700
MaeI CTAG 9 cut(s) 888, 1058, 1076, 1085, 1371, 1379, 1407, 1680, 1896
MaeII ACGT 7 cut(s) 86, 231, 297, 695, 981, 1016, 1725
MaeIII GTNAC 7 cut(s) 395, 499, 1336, 1763, 1868, 2237, 2243
MbiI CCGCTC 1 cut(s) 2494
MfeI CAATTG 1 cut(s) 1026
MflI RGATCY 1 cut(s) 2020
MhlI GDGCHC 6 cut(s) 309, 750, 950, 2262, 2309, 2448
MlsI TGGCCA 3 cut(s) 1005, 2269, 2516
MluNI TGGCCA 3 cut(s) 1005, 2269, 2516
MlyI GAGTC 4 cut(s) 537, 627, 1443, 2189
MmeI TCCRAC 3 cut(s) 406, 896, 1243
Mox20I TGGCCA 3 cut(s) 1005, 2269, 2516
Mph1103I ATGCAT 1 cut(s) 2657
MroNI GCCGGC 1 cut(s) 433
MroXI GAANNNNTTC 3 cut(s) 137, 600, 2480
MscI TGGCCA 3 cut(s) 1005, 2269, 2516
MslI CAYNNNNRTG 3 cut(s) 564, 974, 1866
Msp20I TGGCCA 3 cut(s) 1005, 2269, 2516
MspA1I CMGCKG 2 cut(s) 146, 206
MspI CCGG 5 cut(s) 434, 533, 2489, 2702, 2745
MspR9I CCNGG 8 cut(s) 105, 533, 534, 606, 1463, 2212, 2263, 2745
MunI CAATTG 1 cut(s) 1026
Mva1269I GAATGC 2 cut(s) 539, 2657
MvaI CCWGG 5 cut(s) 105, 606, 1463, 2212, 2263
MvnI CGCG 3 cut(s) 675, 868, 2286
MwoI GCNNNNNNNGC 9 cut(s) 1063, 1072, 1289, 1727, 2015, 2266, 2275, 2339, 2413
NaeI GCCGGC 1 cut(s) 435
NciI CCSGG 3 cut(s) 533, 534, 2745
NdeI CATATG 3 cut(s) 1555, 2098, 2318
NgoMIV GCCGGC 1 cut(s) 433
NheI GCTAGC 2 cut(s) 1075, 1370
NlaIV GGNNCC 2 cut(s) 1794, 1904
NmuCI GTSAC 5 cut(s) 395, 1763, 1868, 2237, 2243
NruI TCGCGA 1 cut(s) 2286
NsiI ATGCAT 1 cut(s) 2657
OliI CACNNNNGTG 1 cut(s) 1866
PciSI GCTCTTC 2 cut(s) 738, 2283
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PctI GAATGC 2 cut(s) 539, 2657
PdiI GCCGGC 1 cut(s) 435
PdmI GAANNNNTTC 3 cut(s) 137, 600, 2480
PfeI GAWTC 3 cut(s) 1505, 2051, 2409
PfoI TCCNGGA 1 cut(s) 2743
PleI GAGTC 4 cut(s) 536, 626, 1443, 2189
PpsI GAGTC 4 cut(s) 536, 626, 1443, 2189
Ppu21I YACGTR 1 cut(s) 1726
PpuMI RGGWCCY 1 cut(s) 1903
PsiI TTATAA 1 cut(s) 1845
Psp124BI GAGCTC 3 cut(s) 309, 750, 2448
Psp1406I AACGTT 2 cut(s) 231, 297
Psp5II RGGWCCY 1 cut(s) 1903
Psp6I CCWGG 5 cut(s) 103, 604, 1461, 2210, 2261
PspFI CCCAGC 1 cut(s) 142
PspGI CCWGG 5 cut(s) 103, 604, 1461, 2210, 2261
PspN4I GGNNCC 2 cut(s) 1794, 1904
PspPI GGNCC 2 cut(s) 1903, 2699
PspPPI RGGWCCY 1 cut(s) 1903
PstI CTGCAG 2 cut(s) 375, 2107
PstNI CAGNNNCTG 1 cut(s) 1767
PsuI RGATCY 1 cut(s) 2020
PvuII CAGCTG 2 cut(s) 146, 206
RruI TCGCGA 1 cut(s) 2286
RsaI GTAC 6 cut(s) 647, 662, 980, 1125, 1520, 2363
RsaNI GTAC 6 cut(s) 646, 661, 979, 1124, 1519, 2362
RseI CAYNNNNRTG 3 cut(s) 564, 974, 1866
SacI GAGCTC 3 cut(s) 309, 750, 2448
SapI GCTCTTC 2 cut(s) 738, 2283
Sau96I GGNCC 2 cut(s) 1903, 2699
SchI GAGTC 4 cut(s) 537, 627, 1443, 2189
ScrFI CCNGG 8 cut(s) 105, 533, 534, 606, 1463, 2212, 2263, 2745
SduI GDGCHC 6 cut(s) 309, 750, 950, 2262, 2309, 2448
SfaNI GCATC 5 cut(s) 568, 945, 1639, 1864, 2700
SfcI CTRYAG 2 cut(s) 371, 2103
SinI GGWCC 2 cut(s) 1903, 2699
SmaI CCCGGG 1 cut(s) 534
SmiMI CAYNNNNRTG 3 cut(s) 564, 974, 1866
SmlI CTYRAG 7 cut(s) 17, 749, 757, 1241, 1257, 2114, 2447
SmoI CTYRAG 7 cut(s) 17, 749, 757, 1241, 1257, 2114, 2447
SpeI ACTAGT 1 cut(s) 1406
SsiI CCGC 7 cut(s) 352, 673, 1364, 1628, 2016, 2494, 2577
SspMI CTAG 9 cut(s) 888, 1058, 1076, 1085, 1371, 1379, 1407, 1680, 1896
SstI GAGCTC 3 cut(s) 309, 750, 2448
StyD4I CCNGG 8 cut(s) 103, 531, 532, 604, 1461, 2210, 2261, 2743
StyI CCWWGG 1 cut(s) 1684
TaaI ACNGT 9 cut(s) 193, 277, 1152, 1939, 2185, 2243, 2545, 2693, 2774
TaiI ACGT 7 cut(s) 89, 234, 300, 698, 984, 1019, 1728
TaqII GACCGA 1 cut(s) 79
TatI WGTACW 2 cut(s) 660, 1123
TauI GCSGC 3 cut(s) 1630, 2497, 2579
TfiI GAWTC 3 cut(s) 1505, 2051, 2409
TscAI CASTG 8 cut(s) 282, 723, 1257, 1663, 1772, 1791, 2727, 2779
TseFI GTSAC 5 cut(s) 395, 1763, 1868, 2237, 2243
TseI GCWGC 7 cut(s) 53, 56, 206, 349, 373, 2102, 2342
Tsp45I GTSAC 5 cut(s) 395, 1763, 1868, 2237, 2243
TspGWI ACGGA 2 cut(s) 1653, 2606
TspMI CCCGGG 1 cut(s) 532
TspRI CASTG 8 cut(s) 282, 723, 1257, 1663, 1772, 1791, 2727, 2779
VneI GTGCAC 1 cut(s) 2305
VpaK11BI GGWCC 2 cut(s) 1903, 2699
XagI CCTNNNNNAGG 2 cut(s) 609, 2421
XapI RAATTY 5 cut(s) 731, 1234, 1301, 2620, 2763
XmaI CCCGGG 1 cut(s) 532
XmnI GAANNNNTTC 3 cut(s) 137, 600, 2480
XspI CTAG 9 cut(s) 888, 1058, 1076, 1085, 1371, 1379, 1407, 1680, 1896
ZraI GACGTC 1 cut(s) 1017
Zsp2I ATGCAT 1 cut(s) 2657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.