RLG00000025387

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
45463382 .. 45468363
4982 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025387

Sequence Viewer

Length: 2631 bp
ATGTTGCATAACTTGGTTGGTGCAATCACAGGCCATAATAATGGCGGTAGTACGAAACAGATCACAGGAACTGTGGTGCTGATGAAGAAGAATGTGTTGGATTTCAATGACTTCAATGCTTCTGTTCTCGATCGCGTGCATGAATTGTTGGGCCAAAGGGTTTCTCTGCAGCTCATCAGTGCTGTCAATGCCGATTCTGAGAATGGATTGAAAGGGAAACTTGGAAAGCCAGCATATTTGGAAGACTGGATCACCACAATCACTCCTTTAACAGCAGGAGATTCTGCATACAAGGTTACCTTTGACTGGGAAGATGAAATCGGAGTTCCAGGAGCAATCCTAATAAAAAACAATCACCACAGTCAGTTCTACCTTAAGACCATCACACTCGAAGATGTTCCTGGTGAGGGTACAGTTCACTTTGTTTGTAACTCATGGGTGTACCCCGTAGAAAAATACACGAAAGACCGCGTTTTCTTTGTTAACAAGACTTATCTTCCAAGTGAAACACCATTGCCACTACAGAAGTACAGAGAAGACGAACTAGTACACTTGAGAGGAGATGGGAAAGGAGAGCTCCAGGAGTATGACAGGGTCTATGACTATGCTTACTACAATGATCTGGGAAATCCAGACAAGGGTCCGGATTATGCCCGTCCAACTCTGGGAGGGTCTAGTGAGTACCCTTACCCTCGAAGAGGAAGAACTGGCCGTGCACCAACCGAGTCAGATCCTAGCAGTGAGAGTAGGATCCCTCTTCTCATGAGCTTAGACATTTATGTTCCAAGAGACGAACGATTTGGACACTTGAAGATGTCTGATTTCCTTGCTTATGCACTGAAATCCATAGCTCAATTCATCAGACCTGAGCTAGAAGCTGTATTTGATAAGACTCCTAACGAGTTTGACAGCTTTGAAGATGTACTTAAACTTTATGAAGGAGGAATTCCATTGCCTGAAGGTTTCTTAAAGGACATTGGGGATAACATCCCTCTAGAGATGATCAAGGAAATTTTCCGAACTGACGGTGCAGAGTTGCTCAGGTTCCCAACGCCTGAAGTGATCAAAAAAAATAGGTTGGCTTGGAGGACAGATGAAGAATTTGCCAGAGAAATGCTAGCTGGAGTGAACCCTGTCAACATTAGTCTCCTCCAAACATTTCCGCCAGCAAGCACCCTAGACCCAAAAGTTTATGGTGATCAATCCAGTAAAATAACAGAAGAACACATCAAGAATAACTTGGATGGACTGACAGTGGAGGAGGTAATATCTTCGATTCATTTCCTTCGGAAGATATTTCTTAGTGCACTCAAGAGCAACAAGCTATTCATATTAGACCACCATGATGCATTGATGCCATACGTGAGGCGTATAAACTCAAATACTTCCTCAAAGATCTATGCTAGCAGGACACTGCTTTTCTTAAAAAGTGATGGAACTTTGAAGCCATTGGTGATTGAACTAAGCTTGCCTCATCCTGATGGAGATCAACTCGGTCGCATTAGCAGTGTATTCACACCAGCTGAGGAAGGTGTAGAAAGCTCCATATGGCAACTGGCCAAAGCTTATGTTGCTGTAAATGACTCTGGAGTTCATCAACTTATCAGTCACTGGTTGAATACTCATGCTGTGTGTGAGCCAGTAGTAATAGCAACAAACAGGCAACTGAGTGTGGTTCACCCGATATACAAGCTTCTTCATCCTCACTTCCGCGACACCATGAACATAAATGCACTAGCCAGGCAAATCCTCATCAATGCTGGTGGCATTCTGGAGACGACAGTGTTTCCAGCTAGGTATGCCATGGAGATGTCATCAGTTGTTTACAAGAATTGGGTTTTCCCTGAGCAAGCTCTCCCTGCAGATCTTATCAAGAGAGGAATGGCAGTCAAGGATGAGAGTTCCCCACATGGTCTACGCCTACTGATACAGGACTACCCCTATGGTGTTGATGGGATCGAAATCTGGTTTGCGATAAGAAATTGGGTTGAAGACTATTGCTCATTCTACTACAAGACTGATGACATTGTTCAAAAAGACACAGAACTCCAATCCTGGTGGAAGGAACTAGTAGAGGAGGGTCATGGTGACAAAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTTGTGAAGAGCTAATCGAAACTTGCACTATCATCATATGGACTTCATCTGCTCTCCATGCAGCTGTCAACTTTGGACAGTACCCTTACGCAGGCTACCTCCCATGCCGCCCCACTGCAAGCCGAAGATTCATGCCTGAAAAGGGAACTCCTGAGTATGATGAGCTTGAGTCCAACCCTGATAAGGCCTTCTTGAAAACAATCACTGCTCAATTCCAGACAGTGCTTGGCATAGCCCTCATTGAAATTCTGTCAAGGCATTCTACTGATGAAGTGTATTTGGGCCAGAGGGACACTCCTAACTGGACATCAGACGCAAAAGCATTGGAAGCTTTTGATAGATTTGGAAAGAAACTTGCTGAAATCGAAGAGAAAATTACAAACTTGAACAATGATGAGAATCTCAAGAATAGGGTTGGAAAGGTGGAGGTGCCTTACACTTTGCTGTATCCCACTGGTGAAAGTGGAATTGCTGGCAAGGGAATTCCCAACAGTGTCTCAATCTAA

Protein Analysis

877

Amino Acids

98.98

Weight (kDa)

5.34

Isoelectric Point (pI)

40.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 56 - 160 1.8e-23 PLAT/LH2 domain
Lipoxygenase PF00305 173 - 859 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2554
AccI GTMKAC 1 cut(s) 1915
AccII CGCG 3 cut(s) 135, 471, 1713
AccIII TCCGGA 1 cut(s) 643
AciI CCGC 5 cut(s) 45, 469, 1163, 1711, 2233
AclWI GGATC 5 cut(s) 257, 725, 745, 758, 1964
AcoI YGGCCR 2 cut(s) 709, 1557
AcsI RAATTY 5 cut(s) 945, 1011, 1100, 2370, 2607
AcuI CTGAAG 2 cut(s) 978, 1077
AfaI GTAC 8 cut(s) 52, 412, 443, 530, 549, 683, 924, 2207
AfiI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2216, 2267, 2308
AflII CTTAAG 1 cut(s) 374
AhlI ACTAGT 2 cut(s) 544, 2068
AjnI CCWGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
Alw21I GWGCWC 3 cut(s) 579, 718, 1309
Alw26I GTCTC 4 cut(s) 783, 1151, 1769, 2626
Alw44I GTGCAC 2 cut(s) 714, 1305
AlwI GGATC 5 cut(s) 257, 725, 745, 758, 1964
AlwNI CAGNNNCTG 2 cut(s) 71, 1611
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 7 cut(s) 31, 151, 709, 1557, 2111, 2310, 2407
ApaLI GTGCAC 2 cut(s) 714, 1305
ApeKI GCWGC 2 cut(s) 169, 2186
ApoI RAATTY 5 cut(s) 945, 1011, 1100, 2370, 2607
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
Asp700I GAANNNNTTC 1 cut(s) 396
AspS9I GGNCC 3 cut(s) 151, 641, 2407
AsuHPI GGTGA 8 cut(s) 244, 347, 416, 1208, 1465, 1670, 2099, 2594
AsuNHI GCTAGC 2 cut(s) 1117, 1403
AvaII GGWCC 1 cut(s) 641
BaeGI GKGCMC 2 cut(s) 718, 1309
BalI TGGCCA 1 cut(s) 1559
BamHI GGATCC 1 cut(s) 750
BanI GGYRCC 1 cut(s) 2554
BanII GRGCYC 2 cut(s) 579, 2106
BbsI GAAGAC 3 cut(s) 249, 543, 1998
Bbv12I GWGCWC 3 cut(s) 579, 718, 1309
BbvCI CCTCAGC 1 cut(s) 1524
BbvI GCAGC 2 cut(s) 181, 2198
BccI CCATC 6 cut(s) 389, 557, 1238, 1427, 1475, 1946
BceAI ACGGC 1 cut(s) 696
BciT130I CCWGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
BciVI GTATCC 1 cut(s) 2583
BclI TGATCA 3 cut(s) 1002, 1062, 1198
BcoDI GTCTC 4 cut(s) 783, 1151, 1769, 2626
BcuI ACTAGT 2 cut(s) 544, 2068
BfmI CTRYAG 3 cut(s) 167, 521, 1860
BfrI CTTAAG 1 cut(s) 374
BfuI GTATCC 1 cut(s) 2583
BglI GCCNNNNNGGC 1 cut(s) 2110
BglII AGATCT 2 cut(s) 1395, 1864
BisI GCNGC 3 cut(s) 170, 2187, 2233
BlsI GCNGC 3 cut(s) 171, 2188, 2234
Bme1390I CCNGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
Bme18I GGWCC 1 cut(s) 641
BmgT120I GGNCC 3 cut(s) 151, 641, 2407
BmiI GGNNCC 4 cut(s) 642, 752, 1046, 2556
BmrFI CCNGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
BmrI ACTGGG 1 cut(s) 316
BmsI GCATC 2 cut(s) 1336, 1344
BmtI GCTAGC 2 cut(s) 1121, 1407
BmuI ACTGGG 1 cut(s) 316
BoxI GACNNNNGTC 1 cut(s) 639
BpiI GAAGAC 3 cut(s) 249, 543, 1998
BplI GAGNNNNNCTC 4 cut(s) 1476, 1508, 2404, 2436
BpmI CTGGAG 4 cut(s) 563, 1143, 1608, 1793
Bpu10I CCTNAGC 4 cut(s) 867, 1040, 1524, 1845
BpuEI CTTGAG 4 cut(s) 574, 1295, 2312, 2513
BsaAI YACGTR 1 cut(s) 1363
BsaBI GATNNNNATC 3 cut(s) 1485, 1961, 2523
BsaJI CCNNGG 2 cut(s) 1803, 2105
BsaWI WCCGGW 1 cut(s) 643
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2216, 2267, 2308
Bse1I ACTGG 9 cut(s) 251, 311, 712, 1206, 1560, 1616, 1640, 2432, 2584
Bse3DI GCAATG 2 cut(s) 512, 950
Bse8I GATNNNNATC 3 cut(s) 1485, 1961, 2523
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
BseDI CCNNGG 2 cut(s) 1803, 2105
BseGI GGATG 5 cut(s) 987, 1249, 1474, 1699, 1900
BseJI GATNNNNATC 3 cut(s) 1485, 1961, 2523
BseLI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2216, 2267, 2308
BseMI GCAATG 2 cut(s) 512, 950
BseMII CTCAG 7 cut(s) 189, 858, 1054, 1515, 1658, 1836, 2268
BseNI ACTGG 9 cut(s) 251, 311, 712, 1206, 1560, 1616, 1640, 2432, 2584
BseRI GAGGAG 4 cut(s) 573, 1139, 1274, 2090
BseSI GKGCMC 2 cut(s) 718, 1309
BseXI GCAGC 2 cut(s) 181, 2198
BsgI GTGCAG 1 cut(s) 1050
Bsh1236I CGCG 3 cut(s) 135, 471, 1713
Bsh1285I CGRYCG 2 cut(s) 133, 1498
BshFI GGCC 7 cut(s) 33, 153, 711, 1559, 2113, 2312, 2409
BshNI GGYRCC 1 cut(s) 2554
BsiEI CGRYCG 2 cut(s) 133, 1498
BsiHKAI GWGCWC 3 cut(s) 579, 718, 1309
BsiSI CCGG 1 cut(s) 644
BslFI GGGAC 1 cut(s) 2429
BslI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2216, 2267, 2308
BsmAI GTCTC 4 cut(s) 783, 1151, 1769, 2626
BsmBI CGTCTC 2 cut(s) 783, 1769
BsmFI GGGAC 1 cut(s) 2429
BsmI GAATGC 2 cut(s) 1767, 2383
BsnI GGCC 7 cut(s) 33, 153, 711, 1559, 2113, 2312, 2409
Bsp1286I GDGCHC 4 cut(s) 579, 718, 1309, 2106
Bsp13I TCCGGA 1 cut(s) 643
Bsp19I CCATGG 1 cut(s) 1803
BspACI CCGC 5 cut(s) 45, 469, 1163, 1711, 2233
BspANI GGCC 7 cut(s) 33, 153, 711, 1559, 2113, 2312, 2409
BspCNI CTCAG 7 cut(s) 190, 859, 1053, 1516, 1659, 1837, 2269
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 3 cut(s) 135, 471, 1713
BspHI TCATGA 1 cut(s) 762
BspLI GGNNCC 4 cut(s) 642, 752, 1046, 2556
BspMAI CTGCAG 2 cut(s) 171, 1864
BspOI GCTAGC 2 cut(s) 1121, 1407
BspPI GGATC 5 cut(s) 257, 725, 745, 758, 1964
BspQI GCTCTTC 1 cut(s) 2127
BspT107I GGYRCC 1 cut(s) 2554
BspTI CTTAAG 1 cut(s) 374
BsrDI GCAATG 2 cut(s) 512, 950
BsrI ACTGG 9 cut(s) 251, 311, 712, 1206, 1560, 1616, 1640, 2432, 2584
BssECI CCNNGG 2 cut(s) 1803, 2105
BssT1I CCWWGG 1 cut(s) 1803
Bst2UI CCWGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
Bst4CI ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1783, 2205, 2347, 2618
Bst6I CTCTTC 4 cut(s) 691, 762, 2127, 2487
BstAFI CTTAAG 1 cut(s) 374
BstBAI YACGTR 1 cut(s) 1363
BstDSI CCRYGG 1 cut(s) 1803
BstEII GGTNACC 1 cut(s) 295
BstENI CCTNNNNNAGG 2 cut(s) 696, 2214
BstF5I GGATG 5 cut(s) 987, 1249, 1474, 1699, 1900
BstFNI CGCG 3 cut(s) 135, 471, 1713
BstMAI GTCTC 4 cut(s) 783, 1151, 1769, 2626
BstMCI CGRYCG 2 cut(s) 133, 1498
BstMWI GCNNNNNNNGC 8 cut(s) 188, 1571, 1799, 1859, 2110, 2119, 2183, 2453
BstNI CCWGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
BstPAI GACNNNNGTC 1 cut(s) 639
BstPI GGTNACC 1 cut(s) 295
BstSCI CCNGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
BstSFI CTRYAG 3 cut(s) 167, 521, 1860
BstSLI GKGCMC 2 cut(s) 718, 1309
BstUI CGCG 3 cut(s) 135, 471, 1713
BstV1I GCAGC 2 cut(s) 181, 2198
BstV2I GAAGAC 3 cut(s) 249, 543, 1998
BstX2I RGATCY 4 cut(s) 730, 750, 1395, 1864
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 4 cut(s) 730, 750, 1395, 1864
BsuI GTATCC 1 cut(s) 2583
BsuRI GGCC 7 cut(s) 33, 153, 711, 1559, 2113, 2312, 2409
BtgI CCRYGG 1 cut(s) 1803
BtsCI GGATG 5 cut(s) 987, 1249, 1474, 1699, 1900
BtsI GCAGTG 5 cut(s) 745, 1412, 1513, 2238, 2328
CaiI CAGNNNCTG 2 cut(s) 71, 1611
CciI TCATGA 1 cut(s) 762
Cfr13I GGNCC 3 cut(s) 151, 641, 2407
CseI GACGC 1 cut(s) 2447
Csp6I GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2206
CspCI CAANNNNNGTGG 4 cut(s) 1744, 1779, 2039, 2074
CviQI GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2206
EaeI YGGCCR 2 cut(s) 709, 1557
Eam1104I CTCTTC 4 cut(s) 691, 762, 2127, 2487
EarI CTCTTC 4 cut(s) 691, 762, 2127, 2487
EciI GGCGGA 1 cut(s) 1152
Ecl136II GAGCTC 1 cut(s) 577
Eco130I CCWWGG 1 cut(s) 1803
Eco147I AGGCCT 1 cut(s) 2312
Eco24I GRGCYC 2 cut(s) 579, 2106
Eco47I GGWCC 1 cut(s) 641
Eco53kI GAGCTC 1 cut(s) 577
Eco57I CTGAAG 2 cut(s) 978, 1077
Eco91I GGTNACC 1 cut(s) 295
EcoICRI GAGCTC 1 cut(s) 577
EcoNI CCTNNNNNAGG 2 cut(s) 696, 2214
EcoO65I GGTNACC 1 cut(s) 295
EcoRI GAATTC 2 cut(s) 945, 2607
EcoRII CCWGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
EcoT14I CCWWGG 1 cut(s) 1803
EcoT22I ATGCAT 1 cut(s) 1351
EcoT38I GRGCYC 2 cut(s) 579, 2106
ErhI CCWWGG 1 cut(s) 1803
Esp3I CGTCTC 2 cut(s) 783, 1769
FaqI GGGAC 1 cut(s) 2429
FauNDI CATATG 2 cut(s) 1547, 2162
FbaI TGATCA 3 cut(s) 1002, 1062, 1198
FblI GTMKAC 1 cut(s) 1915
Fnu4HI GCNGC 3 cut(s) 170, 2187, 2233
FokI GGATG 5 cut(s) 974, 1256, 1461, 1686, 1907
FriOI GRGCYC 2 cut(s) 579, 2106
Fsp4HI GCNGC 3 cut(s) 170, 2187, 2233
GluI GCNGC 3 cut(s) 170, 2187, 2233
GsuI CTGGAG 4 cut(s) 563, 1143, 1608, 1793
HaeIII GGCC 7 cut(s) 33, 153, 711, 1559, 2113, 2312, 2409
HapII CCGG 1 cut(s) 644
HgaI GACGC 1 cut(s) 2447
HincII GTYRAC 3 cut(s) 484, 1138, 2194
HindII GTYRAC 3 cut(s) 484, 1138, 2194
HindIII AAGCTT 4 cut(s) 1465, 1563, 1691, 2454
HinfI GANTC 9 cut(s) 194, 281, 725, 892, 1276, 1583, 2253, 2294, 2524
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 1 cut(s) 644
HphI GGTGA 8 cut(s) 244, 347, 416, 1208, 1465, 1670, 2099, 2594
Hpy188I TCNGA 8 cut(s) 199, 323, 730, 820, 863, 1019, 1290, 2437
HpyAV CCTTC 6 cut(s) 932, 953, 1295, 1523, 2056, 2323
HpyCH4III ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1783, 2205, 2347, 2618
HpyCH4IV ACGT 1 cut(s) 1362
HpyF10VI GCNNNNNNNGC 8 cut(s) 188, 1571, 1799, 1859, 2110, 2119, 2183, 2453
HpySE526I ACGT 1 cut(s) 1362
Kpn2I TCCGGA 1 cut(s) 643
Ksp22I TGATCA 3 cut(s) 1002, 1062, 1198
KspAI GTTAAC 1 cut(s) 484
LguI GCTCTTC 1 cut(s) 2127
LmnI GCTCC 3 cut(s) 332, 582, 1547
Lsp1109I GCAGC 2 cut(s) 181, 2198
LweI GCATC 2 cut(s) 1336, 1344
MaeII ACGT 1 cut(s) 1362
MaeIII GTNAC 4 cut(s) 295, 428, 1607, 2087
MflI RGATCY 4 cut(s) 730, 750, 1395, 1864
MhlI GDGCHC 4 cut(s) 579, 718, 1309, 2106
MlsI TGGCCA 1 cut(s) 1559
MluNI TGGCCA 1 cut(s) 1559
MlyI GAGTC 4 cut(s) 734, 886, 1577, 2303
MmeI TCCRAC 4 cut(s) 78, 683, 2322, 2521
Mox20I TGGCCA 1 cut(s) 1559
Mph1103I ATGCAT 1 cut(s) 1351
MroI TCCGGA 1 cut(s) 643
MroXI GAANNNNTTC 1 cut(s) 396
MscI TGGCCA 1 cut(s) 1559
MseI TTAA 6 cut(s) 269, 375, 483, 927, 968, 1424
MslI CAYNNNNRTG 4 cut(s) 39, 1344, 1479, 1808
Msp20I TGGCCA 1 cut(s) 1559
MspA1I CMGCKG 2 cut(s) 1523, 2189
MspCI CTTAAG 1 cut(s) 374
MspI CCGG 1 cut(s) 644
MspR9I CCNGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
Mva1269I GAATGC 2 cut(s) 1767, 2383
MvaI CCWGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
MvnI CGCG 3 cut(s) 135, 471, 1713
MwoI GCNNNNNNNGC 8 cut(s) 188, 1571, 1799, 1859, 2110, 2119, 2183, 2453
NcoI CCATGG 1 cut(s) 1803
NdeI CATATG 2 cut(s) 1547, 2162
NheI GCTAGC 2 cut(s) 1117, 1403
NlaIV GGNNCC 4 cut(s) 642, 752, 1046, 2556
NmuCI GTSAC 2 cut(s) 1607, 2087
NsiI ATGCAT 1 cut(s) 1351
PagI TCATGA 1 cut(s) 762
PceI AGGCCT 1 cut(s) 2312
PciSI GCTCTTC 1 cut(s) 2127
PctI GAATGC 2 cut(s) 1767, 2383
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 5 cut(s) 194, 281, 1276, 2253, 2524
PflFI GACNNNGTC 1 cut(s) 593
PfoI TCCNGGA 2 cut(s) 328, 579
PkrI GCNGC 3 cut(s) 171, 2188, 2234
Ple19I CGATCG 1 cut(s) 133
PleI GAGTC 4 cut(s) 733, 886, 1577, 2302
PpsI GAGTC 4 cut(s) 733, 886, 1577, 2302
Ppu21I YACGTR 1 cut(s) 1363
PshAI GACNNNNGTC 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 579
Psp6I CCWGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
PspEI GGTNACC 1 cut(s) 295
PspGI CCWGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
PspN4I GGNNCC 4 cut(s) 642, 752, 1046, 2556
PspPI GGNCC 3 cut(s) 151, 641, 2407
PstI CTGCAG 2 cut(s) 171, 1864
PstNI CAGNNNCTG 2 cut(s) 71, 1611
PsuI RGATCY 4 cut(s) 730, 750, 1395, 1864
PsyI GACNNNGTC 1 cut(s) 593
PvuI CGATCG 1 cut(s) 133
PvuII CAGCTG 2 cut(s) 1523, 2189
RsaI GTAC 8 cut(s) 52, 412, 443, 530, 549, 683, 924, 2207
RsaNI GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2206
RseI CAYNNNNRTG 4 cut(s) 39, 1344, 1479, 1808
SacI GAGCTC 1 cut(s) 579
SapI GCTCTTC 1 cut(s) 2127
SaqAI TTAA 6 cut(s) 269, 375, 483, 927, 968, 1424
SatI GCNGC 3 cut(s) 170, 2187, 2233
Sau96I GGNCC 3 cut(s) 151, 641, 2407
SchI GAGTC 4 cut(s) 734, 886, 1577, 2303
ScrFI CCNGG 6 cut(s) 330, 402, 581, 1741, 2056, 2107
SduI GDGCHC 4 cut(s) 579, 718, 1309, 2106
SfaNI GCATC 2 cut(s) 1336, 1344
SfcI CTRYAG 3 cut(s) 167, 521, 1860
SinI GGWCC 1 cut(s) 641
SmiMI CAYNNNNRTG 4 cut(s) 39, 1344, 1479, 1808
SmlI CTYRAG 5 cut(s) 374, 553, 1310, 2291, 2528
SmoI CTYRAG 5 cut(s) 374, 553, 1310, 2291, 2528
SpeI ACTAGT 2 cut(s) 544, 2068
SseBI AGGCCT 1 cut(s) 2312
SsiI CCGC 5 cut(s) 45, 469, 1163, 1711, 2233
SstI GAGCTC 1 cut(s) 579
StuI AGGCCT 1 cut(s) 2312
StyD4I CCNGG 6 cut(s) 328, 400, 579, 1739, 2054, 2105
StyI CCWWGG 1 cut(s) 1803
TaaI ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1783, 2205, 2347, 2618
TaiI ACGT 1 cut(s) 1365
TaqI TCGA 7 cut(s) 129, 390, 694, 1274, 1959, 2142, 2490
TaqII GACCGA 1 cut(s) 1484
TatI WGTACW 3 cut(s) 528, 547, 922
TauI GCSGC 1 cut(s) 2235
TfiI GAWTC 5 cut(s) 194, 281, 1276, 2253, 2524
Tru1I TTAA 6 cut(s) 269, 375, 483, 927, 968, 1424
Tru9I TTAA 6 cut(s) 269, 375, 483, 927, 968, 1424
TseFI GTSAC 2 cut(s) 1607, 2087
TseI GCWGC 2 cut(s) 169, 2186
Tsp45I GTSAC 2 cut(s) 1607, 2087
Tth111I GACNNNGTC 1 cut(s) 593
Vha464I CTTAAG 1 cut(s) 374
VneI GTGCAC 2 cut(s) 714, 1305
VpaK11BI GGWCC 1 cut(s) 641
XagI CCTNNNNNAGG 2 cut(s) 696, 2214
XapI RAATTY 5 cut(s) 945, 1011, 1100, 2370, 2607
XbaI TCTAGA 1 cut(s) 994
XcmI CCANNNNNNNNNTGG 2 cut(s) 1552, 2348
XmiI GTMKAC 1 cut(s) 1915
XmnI GAANNNNTTC 1 cut(s) 396
Zsp2I ATGCAT 1 cut(s) 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.