MD04G1204600.v1.1

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
29074899 .. 29097705
22807 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1204600.v1.1.491

Sequence Viewer

Length: 2892 bp
ATGGCCTCAGCTTCTCCAATGGCCAGCCAGCTTAAATCCAGCTTCACCTCTCCAATCACCACCAGACCTTCCTTGCTTTCTCCCAAAGGCCTCTCTACCTCCCCATTCTGGCTCTTCCCTTCCAAGAGACTCTCTTCCTTCCCCATCAAGGCTGTCCAATCTGACAAGCAAAATTTCCAAGTGGTTCAACCCATCAACGGTTTCATTGGAAGCTTGGAGACTCCAGTGACATCAAGCCCCTTGATTGCTTGGTACTTGTCCAACCTCCTAGCCTACAGGACGGCAGTCAGCCCACTTCTCAGGGTTATTGAGAATATAGTTGAGAAGCTCACAGGCCACCAGCAAAATGGGAATCATGGAAAGATCAATGGGACTGTGGTGCTGATGAAGAAGAATGTTTTGGACTTCAACGATCTCAACGCTTCGGTTCTCGATGGCGTGTACGAGTTGGTCGGCCAAGGGGTTTCTCTGCAGCTCATCAGTGCCGTTCATGCTGATGATTCCAAAAATGGATGGAAGGGGAAGCTTGGACAGCCAGCTTATTTGGAAGACTGGATTACCACAATCACACCTTTAACAACAGGAGAGTCTGCATTCAAGGTTACATTTGACTATGAAGAGGAAGTAGGAGTTCCAGGAGCATTCTTAATCAAAAACAACCACCACAGTGAGTTCTTCCTCAAGACCGTCACACTCGAAAATGTTCCCGGTGAGGGCCGTGTACACATCGTTTGCAACTCTTGGGTGTACCCTACTGAAAAATACACCACAGACCGTGTTTTCTTCGTCAACAAGACTTATCTTCCAAGTGAGACACCATTGCCGTTGCGAAAATACAGAGAAGAGGAGCTAGTACACTTGAGGGGTAATGGAAAAGGAGAGCTCCAAGAATGGGACAGGGTTTATGACTATGCTTACTACAATGATTTGGGGAAACCTGATGAAGGTGCCAAATACGTCCGTCCTGTTCTCGGAGGGTCTAGTGAGTACCCTTACCCTCGTCGTGGAAGAACTGGCCGACCACCAACTAGGACAGATCCTAACAGCGAGAGTAATCTGCCGCTTATTCAGAGCTTAAACATCTACGTTCCAAGGGATGAAAGATTTGGACACTTGAAGCTGTCAGACTTCCTTGTTTATGCCCTGAAATCCACAGCTCAGTTCATTACACCGGAGCTAGAATCCTTGTTCGACCAAACTCCTAGCGAGTTTGACAGCTTTGAAGATGTGCTTAAGCTCTACGAAGGAGGCATTCCGTTGCCTGAAGGTTTATTGAAGGATATTGGAGACAAGATCCCTGCGGAGATGCTGAAGGAAATTTTCCGAACTGATGGTGCACAATTGCTCAAATTCCCAAAGCCTCAAGTGATCAAAGAGGATAAATCTGCTTGGAGGACCGATGAAGAATTTGCGAGGGAAATGCTGGCTGGAGTAAACCCTGTCAACATTGCTCGTCTCCAAGAATTTCCGCCAGCAAGCAAGCTAGATCCAAAAGTTTACGGTGATCAAAACAGTACAATAACCAAAGAACATATAAAGAACAACTTGGATGGACTAACAGTGGATGAGGCACTCAAGAAAAACAAGTTATTCATACTAGACCATCATGATTCACTGATGCCGTACCTGAGGCGGATAAACTCAACTTCGAACAAGATCTACGGTAGCAGAACTCTGTTGTTCTTGCAAAATGATGGAACTTTGAAACCATTGGTGATCGAGTTGAGCTTGCCTCATCCCGAAGGAGATCAATTTGGTTGCATTAGTAATGTCTACACACCAGCTGAACAAGGTGTGGAAGGTTCCATATGGCAACTGGCTAAAGCTTATGTGGCTGTCAATGACTCCGGAGTCCATCAACTCATCAGCCACTGGTTGAACACTCATGCAGTGAGTGAGCCAGTTGTAATTGCCACAAACAGGCAACTAAGCGTGGTTCACCCGATTTACAAACTTCTGCATCCTCACTTCCGTGACACGATGAACATCAATGCATTTGCGAGGCAAATCCTCATCAATGCTGGCGGTATTCTTGAGACGACAGTTTTCCCAGCTAGGTATGCCATGGAGATGTCATCAGTTGTGTACAAGGATTGGAATTTCAATGAGCAAGCTCTCCCTGCCGATCTCATCAAAAGAGGAGTGGTAGTGAAGGATAAAAATTATCCACACGGTCTTTGCCTACTGATCGAGGACTACCCGTATGCTGTCGATGGGATTGAAATCTGGTTTGCAATAAGAACATGGGTTGCAGACTACTGCTCTTTCTACTACAAGACCGATGATATAATCCAGAAAGACGCCGAGCTCCAATCCTGGTGGAAGGAGCTAGTAGAGGAAGGCCACGGTGACAAAAAAGACGAGCCCTGGTGGCCAAAATTGCAGACTTTCGAAGAGCTAGTTGAAATCTGCACAATTATCATATGGACTGCTTCTGCCCTCCATGCAGCTGTCAACTTCGGACAGTACCCTTACGCCGGATACCTTCCCAACCGCCCTACTATAAGCCGAAAATTCATGCCCGTAAAGGGAACTGCTGAATACGAAGAGCTCAAGTCCAACCCCGACAAAGTGTTCTTGAAAACAGTCACTGCTCAGCTGCAGACACTGCTTGGCATTTCCCTCATTGAAATTTTGTCAAGGCATTCTACTGATGAAGTGTACTTGGGTAAGCGAGACACGCCCGAGTGGACAGCAGATGCTGCGCCATTGGAAGCATTCAACAAGTTTGGAAAGAAACTGGAGGAGATTGAGGAGAGGATTATAAGTATGAACAATGACGAGAAGTTGAAAAACCGCGTTGGACTTGTGAAGGTGCCTTACACTTTGCTGTTTCCTACTAGTGGAGGTGGACTTACTGGCAAGGGAATTCCCAACAGTGTCTCAATTTAA

Protein Analysis

964

Amino Acids

108.51

Weight (kDa)

5.85

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PsaL PF02605 67 - 104 1.3e-07 Photosystem I reaction centre subunit XI
PLAT PF01477 164 - 262 6.3e-21 PLAT/LH2 domain
Lipoxygenase PF00305 275 - 946 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2765
AasI GACNNNNNNGTC 1 cut(s) 1850
AccB1I GGYRCC 2 cut(s) 947, 2815
AccI GTMKAC 1 cut(s) 1773
AccII CGCG 1 cut(s) 2799
AccIII TCCGGA 1 cut(s) 1847
AciI CCGC 7 cut(s) 1061, 1301, 1469, 1633, 2025, 2494, 2797
AclWI GGATC 3 cut(s) 1031, 1288, 1481
AcoI YGGCCR 4 cut(s) 21, 454, 1015, 2372
AcsI RAATTY 9 cut(s) 172, 1317, 1349, 1406, 1463, 2098, 2513, 2631, 2868
AcuI CTGAAG 2 cut(s) 1284, 1331
AcyI GRCGYC 1 cut(s) 2301
AflII CTTAAG 1 cut(s) 1232
AhlI ACTAGT 1 cut(s) 2840
AjnI CCWGG 3 cut(s) 634, 2315, 2366
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AleI CACNNNNGTG 2 cut(s) 666, 1971
Alw21I GWGCWC 4 cut(s) 885, 1339, 2310, 2553
Alw26I GTCTC 8 cut(s) 121, 212, 806, 1281, 1460, 2030, 2670, 2887
Alw44I GTGCAC 1 cut(s) 1335
AlwI GGATC 3 cut(s) 1031, 1288, 1481
AlwNI CAGNNNCTG 4 cut(s) 1872, 2591, 2608, 2702
Ama87I CYCGRG 1 cut(s) 2684
Aor13HI TCCGGA 1 cut(s) 1847
AoxI GGCC 9 cut(s) 3, 21, 88, 334, 454, 715, 1015, 2341, 2372
ApaLI GTGCAC 1 cut(s) 1335
ApeKI GCWGC 4 cut(s) 472, 2447, 2599, 2702
ApoI RAATTY 9 cut(s) 172, 1317, 1349, 1406, 1463, 2098, 2513, 2631, 2868
Asp700I GAANNNNTTC 1 cut(s) 702
AspLEI GCGC 1 cut(s) 2707
AspS9I GGNCC 2 cut(s) 715, 1395
AsuC2I CCSGG 1 cut(s) 708
AsuHPI GGTGA 7 cut(s) 37, 49, 722, 1514, 1726, 1931, 2360
AsuII TTCGAA 2 cut(s) 1649, 2391
AvaI CYCGRG 1 cut(s) 2684
AvaII GGWCC 1 cut(s) 1395
AxyI CCTNAGG 1 cut(s) 1628
BaeGI GKGCMC 1 cut(s) 1339
BalI TGGCCA 2 cut(s) 23, 2374
BanI GGYRCC 2 cut(s) 947, 2815
BanII GRGCYC 4 cut(s) 885, 2310, 2367, 2553
BarI GAAGNNNNNNTAC 2 cut(s) 2804, 2836
BbsI GAAGAC 1 cut(s) 555
Bbv12I GWGCWC 4 cut(s) 885, 1339, 2310, 2553
BbvCI CCTCAGC 1 cut(s) 7
BbvI GCAGC 4 cut(s) 484, 2459, 2586, 2689
BceAI ACGGC 5 cut(s) 297, 470, 702, 808, 1606
BcgI CGANNNNNNTGC 2 cut(s) 1402, 1436
BciT130I CCWGG 3 cut(s) 636, 2317, 2368
BciVI GTATCC 1 cut(s) 2474
BclI TGATCA 2 cut(s) 1368, 1504
BcnI CCSGG 1 cut(s) 708
BcoDI GTCTC 8 cut(s) 121, 212, 806, 1281, 1460, 2030, 2670, 2887
BcuI ACTAGT 1 cut(s) 2840
BfmI CTRYAG 3 cut(s) 274, 470, 2600
BfrI CTTAAG 1 cut(s) 1232
BfuI GTATCC 1 cut(s) 2474
BglI GCCNNNNNGGC 1 cut(s) 2371
BglII AGATCT 1 cut(s) 1656
BisI GCNGC 5 cut(s) 473, 1061, 2448, 2600, 2703
BlpI GCTNAGC 1 cut(s) 2595
BlsI GCNGC 5 cut(s) 474, 1062, 2449, 2601, 2704
Bme1390I CCNGG 4 cut(s) 636, 708, 2317, 2368
Bme18I GGWCC 1 cut(s) 1395
BmeT110I CYCGRG 1 cut(s) 2684
BmgT120I GGNCC 2 cut(s) 715, 1395
BmiI GGNNCC 3 cut(s) 949, 1804, 2817
BmrFI CCNGG 4 cut(s) 636, 708, 2317, 2368
BmsI GCATC 4 cut(s) 1296, 1608, 1969, 2689
BoxI GACNNNNGTC 1 cut(s) 284
BpiI GAAGAC 1 cut(s) 555
BplI GAGNNNNNCTC 2 cut(s) 1717, 1749
BpmI CTGGAG 3 cut(s) 207, 1449, 2762
Bpu10I CCTNAGC 1 cut(s) 7
Bpu1102I GCTNAGC 1 cut(s) 2595
Bpu14I TTCGAA 2 cut(s) 1649, 2391
BpuEI CTTGAG 6 cut(s) 665, 880, 1347, 1559, 2054, 2537
BpuMI CCSGG 1 cut(s) 708
BsaBI GATNNNNATC 2 cut(s) 1985, 2222
BsaHI GRCGYC 1 cut(s) 2301
BsaJI CCNNGG 5 cut(s) 457, 1091, 2064, 2344, 2366
BsaWI WCCGGW 2 cut(s) 1171, 1847
BsaXI ACNNNNNCTCC 2 cut(s) 2133, 2163
Bse1I ACTGG 8 cut(s) 224, 557, 1018, 1821, 1877, 1901, 2745, 2863
Bse21I CCTNAGG 1 cut(s) 1628
Bse3DI GCAATG 2 cut(s) 818, 1446
Bse8I GATNNNNATC 2 cut(s) 1985, 2222
BseAI TCCGGA 1 cut(s) 1847
BseBI CCWGG 3 cut(s) 636, 2317, 2368
BseDI CCNNGG 5 cut(s) 457, 1091, 2064, 2344, 2366
BseGI GGATG 6 cut(s) 518, 1102, 1555, 1570, 1735, 1960
BseJI GATNNNNATC 2 cut(s) 1985, 2222
BseMI GCAATG 2 cut(s) 818, 1446
BseMII CTCAG 5 cut(s) 21, 313, 1172, 1619, 2609
BseNI ACTGG 8 cut(s) 224, 557, 1018, 1821, 1877, 1901, 2745, 2863
BseRI GAGGAG 4 cut(s) 860, 2154, 2759, 2768
BseSI GKGCMC 1 cut(s) 1339
BseXI GCAGC 4 cut(s) 484, 2459, 2586, 2689
BseYI CCCAGC 1 cut(s) 2050
BsgI GTGCAG 1 cut(s) 2395
Bsh1236I CGCG 1 cut(s) 2799
BshFI GGCC 9 cut(s) 5, 23, 90, 336, 456, 717, 1017, 2343, 2374
BshNI GGYRCC 2 cut(s) 947, 2815
BsiHKAI GWGCWC 4 cut(s) 885, 1339, 2310, 2553
BsiHKCI CYCGRG 1 cut(s) 2684
BsiSI CCGG 4 cut(s) 708, 1172, 1848, 2478
BslFI GGGAC 2 cut(s) 385, 908
BsmAI GTCTC 8 cut(s) 121, 212, 806, 1281, 1460, 2030, 2670, 2887
BsmBI CGTCTC 2 cut(s) 1460, 2030
BsmFI GGGAC 2 cut(s) 385, 908
BsmI GAATGC 5 cut(s) 593, 641, 1251, 2644, 2717
BsnI GGCC 9 cut(s) 5, 23, 90, 336, 456, 717, 1017, 2343, 2374
BsoBI CYCGRG 1 cut(s) 2684
Bsp119I TTCGAA 2 cut(s) 1649, 2391
Bsp1286I GDGCHC 5 cut(s) 885, 1339, 2310, 2367, 2553
Bsp13I TCCGGA 1 cut(s) 1847
Bsp1407I TGTACA 2 cut(s) 721, 2085
Bsp1720I GCTNAGC 1 cut(s) 2595
Bsp19I CCATGG 1 cut(s) 2064
BspACI CCGC 7 cut(s) 1061, 1301, 1469, 1633, 2025, 2494, 2797
BspANI GGCC 9 cut(s) 5, 23, 90, 336, 456, 717, 1017, 2343, 2374
BspCNI CTCAG 5 cut(s) 20, 312, 1171, 1620, 2608
BspEI TCCGGA 1 cut(s) 1847
BspFNI CGCG 1 cut(s) 2799
BspHI TCATGA 1 cut(s) 1606
BspLI GGNNCC 3 cut(s) 949, 1804, 2817
BspMAI CTGCAG 2 cut(s) 474, 2604
BspPI GGATC 3 cut(s) 1031, 1288, 1481
BspQI GCTCTTC 3 cut(s) 119, 2388, 2541
BspT104I TTCGAA 2 cut(s) 1649, 2391
BspT107I GGYRCC 2 cut(s) 947, 2815
BspTI CTTAAG 1 cut(s) 1232
BsrDI GCAATG 2 cut(s) 818, 1446
BsrGI TGTACA 2 cut(s) 721, 2085
BsrI ACTGG 8 cut(s) 224, 557, 1018, 1821, 1877, 1901, 2745, 2863
BssECI CCNNGG 5 cut(s) 457, 1091, 2064, 2344, 2366
BssNI GRCGYC 1 cut(s) 2301
BssT1I CCWWGG 3 cut(s) 457, 1091, 2064
Bst2UI CCWGG 3 cut(s) 636, 2317, 2368
Bst6I CTCTTC 6 cut(s) 119, 139, 612, 837, 2388, 2541
BstACI GRCGYC 1 cut(s) 2301
BstAFI CTTAAG 1 cut(s) 1232
BstAPI GCANNNNNTGC 2 cut(s) 2608, 2702
BstAUI TGTACA 2 cut(s) 721, 2085
BstBI TTCGAA 2 cut(s) 1649, 2391
BstDEI CTNAG 6 cut(s) 7, 299, 1158, 1628, 1928, 2595
BstDSI CCRYGG 2 cut(s) 2064, 2344
BstENI CCTNNNNNAGG 1 cut(s) 942
BstF5I GGATG 6 cut(s) 518, 1102, 1555, 1570, 1735, 1960
BstFNI CGCG 1 cut(s) 2799
BstHHI GCGC 1 cut(s) 2707
BstMAI GTCTC 8 cut(s) 121, 212, 806, 1281, 1460, 2030, 2670, 2887
BstNI CCWGG 3 cut(s) 636, 2317, 2368
BstPAI GACNNNNGTC 1 cut(s) 284
BstSCI CCNGG 4 cut(s) 634, 706, 2315, 2366
BstSFI CTRYAG 3 cut(s) 274, 470, 2600
BstSLI GKGCMC 1 cut(s) 1339
BstUI CGCG 1 cut(s) 2799
BstV1I GCAGC 4 cut(s) 484, 2459, 2586, 2689
BstV2I GAAGAC 1 cut(s) 555
BstX2I RGATCY 4 cut(s) 1036, 1293, 1486, 1656
BstXI CCANNNNNNTGG 1 cut(s) 347
BstYI RGATCY 4 cut(s) 1036, 1293, 1486, 1656
Bsu36I CCTNAGG 1 cut(s) 1628
BsuI GTATCC 1 cut(s) 2474
BsuRI GGCC 9 cut(s) 5, 23, 90, 336, 456, 717, 1017, 2343, 2374
BtgI CCRYGG 2 cut(s) 2064, 2344
BtsCI GGATG 6 cut(s) 518, 1102, 1555, 1570, 1735, 1960
BtsI GCAGTG 3 cut(s) 1896, 2589, 2606
CaiI CAGNNNCTG 4 cut(s) 1872, 2591, 2608, 2702
CciI TCATGA 1 cut(s) 1606
CfoI GCGC 1 cut(s) 2707
Cfr13I GGNCC 2 cut(s) 715, 1395
CseI GACGC 1 cut(s) 2309
CspCI CAANNNNNGTGG 2 cut(s) 2300, 2335
CviAII CATG 8 cut(s) 356, 491, 1607, 1886, 2065, 2244, 2444, 2518
DdeI CTNAG 6 cut(s) 7, 299, 1158, 1628, 1928, 2595
DrdI GACNNNNNNGTC 1 cut(s) 1850
DseDI GACNNNNNNGTC 1 cut(s) 1850
EaeI YGGCCR 4 cut(s) 21, 454, 1015, 2372
Eam1104I CTCTTC 6 cut(s) 119, 139, 612, 837, 2388, 2541
EarI CTCTTC 6 cut(s) 119, 139, 612, 837, 2388, 2541
EciI GGCGGA 2 cut(s) 1458, 1648
Ecl136II GAGCTC 3 cut(s) 883, 2308, 2551
Eco130I CCWWGG 3 cut(s) 457, 1091, 2064
Eco147I AGGCCT 1 cut(s) 90
Eco24I GRGCYC 4 cut(s) 885, 2310, 2367, 2553
Eco47I GGWCC 1 cut(s) 1395
Eco53kI GAGCTC 3 cut(s) 883, 2308, 2551
Eco57I CTGAAG 2 cut(s) 1284, 1331
Eco81I CCTNAGG 1 cut(s) 1628
Eco88I CYCGRG 1 cut(s) 2684
EcoICRI GAGCTC 3 cut(s) 883, 2308, 2551
EcoNI CCTNNNNNAGG 1 cut(s) 942
EcoRI GAATTC 1 cut(s) 2868
EcoRII CCWGG 3 cut(s) 634, 2315, 2366
EcoT14I CCWWGG 3 cut(s) 457, 1091, 2064
EcoT22I ATGCAT 1 cut(s) 1996
EcoT38I GRGCYC 4 cut(s) 885, 2310, 2367, 2553
ErhI CCWWGG 3 cut(s) 457, 1091, 2064
Esp3I CGTCTC 2 cut(s) 1460, 2030
FaeI CATG 8 cut(s) 359, 494, 1610, 1889, 2068, 2247, 2447, 2521
FalI AAGNNNNNCTT 4 cut(s) 1215, 1247, 1529, 1561
FaqI GGGAC 2 cut(s) 385, 908
FatI CATG 8 cut(s) 355, 490, 1606, 1885, 2064, 2243, 2443, 2517
FauNDI CATATG 2 cut(s) 1808, 2423
FbaI TGATCA 2 cut(s) 1368, 1504
FblI GTMKAC 1 cut(s) 1773
Fnu4HI GCNGC 5 cut(s) 473, 1061, 2448, 2600, 2703
FokI GGATG 6 cut(s) 525, 1109, 1562, 1577, 1722, 1947
FriOI GRGCYC 4 cut(s) 885, 2310, 2367, 2553
Fsp4HI GCNGC 5 cut(s) 473, 1061, 2448, 2600, 2703
GlaI GCGC 1 cut(s) 2706
GluI GCNGC 5 cut(s) 473, 1061, 2448, 2600, 2703
GsaI CCCAGC 1 cut(s) 2054
GsuI CTGGAG 3 cut(s) 207, 1449, 2762
HaeIII GGCC 9 cut(s) 5, 23, 90, 336, 456, 717, 1017, 2343, 2374
HapII CCGG 4 cut(s) 708, 1172, 1848, 2478
HgaI GACGC 1 cut(s) 2309
HhaI GCGC 1 cut(s) 2707
Hin1I GRCGYC 1 cut(s) 2301
Hin1II CATG 8 cut(s) 359, 494, 1610, 1889, 2068, 2247, 2447, 2521
Hin6I GCGC 1 cut(s) 2705
HinP1I GCGC 1 cut(s) 2705
HincII GTYRAC 3 cut(s) 790, 1444, 2455
HindII GTYRAC 3 cut(s) 790, 1444, 2455
HindIII AAGCTT 3 cut(s) 211, 524, 1824
HinfI GANTC 9 cut(s) 129, 220, 352, 500, 587, 1181, 1610, 1844, 1851
HpaII CCGG 4 cut(s) 708, 1172, 1848, 2478
HphI GGTGA 7 cut(s) 37, 49, 722, 1514, 1726, 1931, 2360
Hpy188I TCNGA 6 cut(s) 163, 974, 1071, 1126, 1325, 2462
Hpy188III TCNNGA 9 cut(s) 431, 682, 1576, 1607, 1739, 1848, 2033, 2293, 2578
Hpy99I CGWCG 1 cut(s) 1005
HpyCH4IV ACGT 2 cut(s) 957, 1086
HpyF3I CTNAG 6 cut(s) 7, 299, 1158, 1628, 1928, 2595
HpySE526I ACGT 2 cut(s) 957, 1086
Hsp92I GRCGYC 1 cut(s) 2301
Hsp92II CATG 8 cut(s) 359, 494, 1610, 1889, 2068, 2247, 2447, 2521
HspAI GCGC 1 cut(s) 2705
Kpn2I TCCGGA 1 cut(s) 1847
Ksp22I TGATCA 2 cut(s) 1368, 1504
LguI GCTCTTC 3 cut(s) 119, 2388, 2541
LmnI GCTCC 6 cut(s) 638, 847, 888, 1174, 2313, 2326
Lsp1109I GCAGC 4 cut(s) 484, 2459, 2586, 2689
LweI GCATC 4 cut(s) 1296, 1608, 1969, 2689
MaeII ACGT 2 cut(s) 957, 1086
MaeIII GTNAC 6 cut(s) 226, 601, 688, 1973, 2348, 2587
MfeI CAATTG 1 cut(s) 1340
MflI RGATCY 4 cut(s) 1036, 1293, 1486, 1656
MhlI GDGCHC 5 cut(s) 885, 1339, 2310, 2367, 2553
MlsI TGGCCA 2 cut(s) 23, 2374
MluNI TGGCCA 2 cut(s) 23, 2374
MlyI GAGTC 5 cut(s) 123, 214, 596, 1838, 1860
MmeI TCCRAC 3 cut(s) 285, 2583, 2782
Mox20I TGGCCA 2 cut(s) 23, 2374
Mph1103I ATGCAT 1 cut(s) 1996
MroI TCCGGA 1 cut(s) 1847
MroXI GAANNNNTTC 1 cut(s) 702
MscI TGGCCA 2 cut(s) 23, 2374
MseI TTAA 6 cut(s) 33, 575, 647, 1076, 1233, 2890
MslI CAYNNNNRTG 4 cut(s) 495, 666, 1971, 2069
Msp20I TGGCCA 2 cut(s) 23, 2374
MspA1I CMGCKG 3 cut(s) 1784, 2450, 2599
MspCI CTTAAG 1 cut(s) 1232
MspI CCGG 4 cut(s) 708, 1172, 1848, 2478
MspR9I CCNGG 4 cut(s) 636, 708, 2317, 2368
MunI CAATTG 1 cut(s) 1340
Mva1269I GAATGC 5 cut(s) 593, 641, 1251, 2644, 2717
MvaI CCWGG 3 cut(s) 636, 2317, 2368
MvnI CGCG 1 cut(s) 2799
NciI CCSGG 1 cut(s) 708
NcoI CCATGG 1 cut(s) 2064
NdeI CATATG 2 cut(s) 1808, 2423
NlaIII CATG 8 cut(s) 359, 494, 1610, 1889, 2068, 2247, 2447, 2521
NlaIV GGNNCC 3 cut(s) 949, 1804, 2817
NmeAIII GCCGAG 1 cut(s) 2329
NmuCI GTSAC 5 cut(s) 226, 688, 1973, 2348, 2587
NsiI ATGCAT 1 cut(s) 1996
NspV TTCGAA 2 cut(s) 1649, 2391
OliI CACNNNNGTG 2 cut(s) 666, 1971
PagI TCATGA 1 cut(s) 1606
PceI AGGCCT 1 cut(s) 90
PciSI GCTCTTC 3 cut(s) 119, 2388, 2541
PctI GAATGC 5 cut(s) 593, 641, 1251, 2644, 2717
PdmI GAANNNNTTC 1 cut(s) 702
PfeI GAWTC 4 cut(s) 352, 500, 1181, 1610
PfoI TCCNGGA 1 cut(s) 634
PkrI GCNGC 5 cut(s) 474, 1062, 2449, 2601, 2704
PleI GAGTC 5 cut(s) 123, 214, 595, 1838, 1859
PpsI GAGTC 5 cut(s) 123, 214, 595, 1838, 1859
PshAI GACNNNNGTC 1 cut(s) 284
PsiI TTATAA 1 cut(s) 2765
Psp124BI GAGCTC 3 cut(s) 885, 2310, 2553
Psp6I CCWGG 3 cut(s) 634, 2315, 2366
PspFI CCCAGC 1 cut(s) 2050
PspGI CCWGG 3 cut(s) 634, 2315, 2366
PspN4I GGNNCC 3 cut(s) 949, 1804, 2817
PspPI GGNCC 2 cut(s) 715, 1395
PsrI GAACNNNNNNTAC 2 cut(s) 1643, 1675
PstI CTGCAG 2 cut(s) 474, 2604
PstNI CAGNNNCTG 4 cut(s) 1872, 2591, 2608, 2702
PsuI RGATCY 4 cut(s) 1036, 1293, 1486, 1656
PvuII CAGCTG 3 cut(s) 1784, 2450, 2599
RseI CAYNNNNRTG 4 cut(s) 495, 666, 1971, 2069
SacI GAGCTC 3 cut(s) 885, 2310, 2553
SapI GCTCTTC 3 cut(s) 119, 2388, 2541
SaqAI TTAA 6 cut(s) 33, 575, 647, 1076, 1233, 2890
SatI GCNGC 5 cut(s) 473, 1061, 2448, 2600, 2703
Sau96I GGNCC 2 cut(s) 715, 1395
SchI GAGTC 5 cut(s) 123, 214, 596, 1838, 1860
ScrFI CCNGG 4 cut(s) 636, 708, 2317, 2368
SduI GDGCHC 5 cut(s) 885, 1339, 2310, 2367, 2553
SfaNI GCATC 4 cut(s) 1296, 1608, 1969, 2689
SfcI CTRYAG 3 cut(s) 274, 470, 2600
SfuI TTCGAA 2 cut(s) 1649, 2391
SinI GGWCC 1 cut(s) 1395
SmiMI CAYNNNNRTG 4 cut(s) 495, 666, 1971, 2069
SmlI CTYRAG 7 cut(s) 680, 859, 1232, 1362, 1574, 2033, 2552
SmoI CTYRAG 7 cut(s) 680, 859, 1232, 1362, 1574, 2033, 2552
SpeI ACTAGT 1 cut(s) 2840
SseBI AGGCCT 1 cut(s) 90
SsiI CCGC 7 cut(s) 1061, 1301, 1469, 1633, 2025, 2494, 2797
SstI GAGCTC 3 cut(s) 885, 2310, 2553
StuI AGGCCT 1 cut(s) 90
StyD4I CCNGG 4 cut(s) 634, 706, 2315, 2366
StyI CCWWGG 3 cut(s) 457, 1091, 2064
TaiI ACGT 2 cut(s) 960, 1089
TaqI TCGA 8 cut(s) 432, 696, 1191, 1649, 1719, 2190, 2211, 2391
TaqII GACCGA 2 cut(s) 1412, 2294
TatI WGTACW 5 cut(s) 721, 853, 1514, 2085, 2661
TauI GCSGC 1 cut(s) 1063
TfiI GAWTC 4 cut(s) 352, 500, 1181, 1610
Tru1I TTAA 6 cut(s) 33, 575, 647, 1076, 1233, 2890
Tru9I TTAA 6 cut(s) 33, 575, 647, 1076, 1233, 2890
TseFI GTSAC 5 cut(s) 226, 688, 1973, 2348, 2587
TseI GCWGC 4 cut(s) 472, 2447, 2599, 2702
Tsp45I GTSAC 5 cut(s) 226, 688, 1973, 2348, 2587
TspGWI ACGGA 3 cut(s) 950, 1245, 1961
Vha464I CTTAAG 1 cut(s) 1232
VneI GTGCAC 1 cut(s) 1335
VpaK11BI GGWCC 1 cut(s) 1395
XagI CCTNNNNNAGG 1 cut(s) 942
XapI RAATTY 9 cut(s) 172, 1317, 1349, 1406, 1463, 2098, 2513, 2631, 2868
XcmI CCANNNNNNNNNTGG 2 cut(s) 344, 1813
XmiI GTMKAC 1 cut(s) 1773
XmnI GAANNNNTTC 1 cut(s) 702
Zsp2I ATGCAT 1 cut(s) 1996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.