Rh3DG066600

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
4489722 .. 4495675
5954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG066600.1

Sequence Viewer

Length: 2589 bp
ATGTTGCATAACTTGGTTGGTGCAATCACAGGCCATAATAATGGCGGTAGTACGAAACAGATCACAGGGACTGTGGTGCTGATGAAGAAGAATGTGTTGGATTTCAATGACTTCAATGCTTCTGTTCTCGATCGCGTGCATGAATTGTTGGGCCAAAGGGTTTCTCTGCAGCTCATCAGTGCTGTCAATGCCGATTCTGAGAATGGATTGAAAGGGAAACTTGGAAAGCCAGCATATTTGGAAGACTGGATCACCACAATCACTCCTTTAACAGCAGGAGATTCTGCATACAAGGTTACCTTTGACTGGGAAGATGAAATCGGAGTTCCAGGAGCAATCCTAGTAAAAAACAATCACCACAGTCAGTTCTACCTTAAGACCATCACACTCGAAGATGTTCCTGGTGAGGGTACAGTTCACTTTGTTTGTAACTCGTGGGTGTACCCTGTAGAAAAATACACGAAAGACCGCGTTTTCTTTGTTAACAAGACTTATCTTCCAAGTGAAACACCATTGCCACTACAGAAGTACAGAGAAGACGAACTAGTACACTTGAGAGGAGATGGGAAAGGAGAGCTCCAGGAGTATGACAGGGTCTATGACTATGCTTACTACAATGATCTGGGAAATCCAGACAAGGGTCCGGATTATGCCCGTCCAACTCTGGGAGGGTCTAGTGAGTACCCTTACCCTCGAAGAGGAAGAACTGGCCGTGCACCAACCGAGTCAGATCCTAGCAGTGAGAGTAGGATCCCTCTTCTCATGAGCTTAGACATTTATGTTCCAAGAGACGAACGATTTGGACACTTGAAGATGTCTGATTTCCTTGCTTATGCACTGAAATCCATAGCTCAATTCATCAAACCTGAGCTAGAAGCTGTATTTGATAAGACTCCTAACGAGTTTGACAGCTTCGAAGATGTACTTAAACTTTATGAAGGAGGAATTCCATTGCCTGAAGGTTTCTTAAAGGACATTGGGGATAACATCCCTCTAGAGATGATCAAGGAAATTTTCCGAACTGACGGTGCAGAGTTGCTCAGGTTCCCAACGCCTGAAGTGATCAAAAAAAATAGGTTGGCTTGGAGGACAGATGAAGAATTTGCCAGAGAAATGCTAGCTGGAGTGAACCCTGTCAACATTAGTCTCCTCCAAACATTTCCGCCAGCAAGCACCCTAGACCCAAAAGTTTATGGTGATCAATCCAGTAAAATAACAGAAGAACACATCAAGAATAACTTGGATGGACTGACAGTGGAGGAGGCACTCAAGAGCAACAAGCTATTCCTGTTAGACCACCATGATGCATTGATGCCATACGTGAGGCGTATAAACTCAAATACTTCCTCAAAGATCTATGCTAGCAGGACACTGCTTTTCTTGAAAAGTGATGGAACTTTGAAGCCATTGGTGATTGAACTAAGCTTGCCTCATCCTGATGGAGATCAACTCGGTCGCATTAGCAGTGTATTCACACCAGCTGAGGAAGGTGTAGAAAGCTCCATATGGCATCTGGCCAAAGCTTATGTTGCTGTAAATGACTCTGGAGTTCATCAACTTATCAGTCACTGGTTGAATACTCATGCTGTGTGTGAGCCAGTAGTAATAGCAACAAACAGGCAACTGAGTGTGGTTCACCCGATATACAAGCTTCTTCATCCTCACTTCCGCGACACCATGAACATAAATGCACTAGCCAGGCAAATCCTCATCAATGCTGGTGGCATTCTGGAGACGACAGTGTTTCCAGCTAGGTATGCCATGGAGATGTCATCAGTTGTTTACAAGAATTGGGTTTTCCCTGAGCAAGCTCTCCCTGCAGATCTTATCAAGAGAGGAATGGCAGTCAAGGATGAGAGTTCCCCACATGGTCTACGCCTACTGATACAGGACTACCCCTATGGTGTTGATGGGATCGAAATCTGGTTTGCGATAAGAAATTGGGTTGAAGACTATTGCTCATTCTACTACAAGACTGATGACATTGTTCAAAAAGACACAGAACTCCAATCCTGGTGGAAGGAACTAGTAGAGGAGGGTCATGGTGACAAAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTTGTGAAGAGCTAATCGAAACTTGCACTATCATCATATGGACTTCTTCTGCTCTCCATGCAGCTGTCAACTTTGGACAGTACCCTTATGCAGGCTACCTCCCATGCCGCCCCACTGCAAGCCGAAGATTCATGCCTGAAAAGGGAACTCCTGAGTATGATGAGCTTGAGTCCAACCCTGATAAGGCCTTCTTGAAAACAATCACTGCTCAATTCCAGACAGTGCTTGGCATAGCCCTCATTGAAATTCTGTCAAGGCATTCTACTGATGAAGTGTATTTGGGCCAGACGGACACTCCTAACTGGACATCAGACGCAAAAGCATTGGAAGCTTTTGATAGATTTGGAAAGAAACTTGCTGAAATCGAAGAGAAAATTACAAACTTGAACAATGATGAGAATCTCAAGAATAGGGTTGGAAAGGTGGAGATGCCTTACACTTTGCTGTATCCCACTGGTGAAAGTGGAATTGCTGGCAAGGGAATTCCCAACAGTGTCTCAATCTAA

Protein Analysis

862

Amino Acids

97.28

Weight (kDa)

5.24

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 56 - 160 2.4e-23 PLAT/LH2 domain
Lipoxygenase PF00305 173 - 845 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1873
AccII CGCG 3 cut(s) 135, 471, 1671
AccIII TCCGGA 1 cut(s) 643
AciI CCGC 5 cut(s) 45, 469, 1163, 1669, 2191
AclWI GGATC 5 cut(s) 257, 725, 745, 758, 1922
AcoI YGGCCR 2 cut(s) 709, 1515
AcsI RAATTY 5 cut(s) 945, 1011, 1100, 2328, 2565
AcuI CTGAAG 2 cut(s) 978, 1077
AfaI GTAC 8 cut(s) 52, 412, 443, 530, 549, 683, 924, 2165
AfiI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2174, 2225, 2266
AflII CTTAAG 1 cut(s) 374
AhlI ACTAGT 2 cut(s) 544, 2026
AjnI CCWGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
Alw21I GWGCWC 2 cut(s) 579, 718
Alw26I GTCTC 4 cut(s) 783, 1151, 1727, 2584
Alw44I GTGCAC 1 cut(s) 714
AlwI GGATC 5 cut(s) 257, 725, 745, 758, 1922
AlwNI CAGNNNCTG 2 cut(s) 71, 1569
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 7 cut(s) 31, 151, 709, 1515, 2069, 2268, 2365
ApaLI GTGCAC 1 cut(s) 714
ApeKI GCWGC 2 cut(s) 169, 2144
ApoI RAATTY 5 cut(s) 945, 1011, 1100, 2328, 2565
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
Asp700I GAANNNNTTC 1 cut(s) 396
AspS9I GGNCC 3 cut(s) 151, 641, 2365
AsuHPI GGTGA 8 cut(s) 244, 347, 416, 1208, 1423, 1628, 2057, 2552
AsuII TTCGAA 1 cut(s) 915
AsuNHI GCTAGC 2 cut(s) 1117, 1361
AvaII GGWCC 1 cut(s) 641
BaeGI GKGCMC 1 cut(s) 718
BalI TGGCCA 1 cut(s) 1517
BamHI GGATCC 1 cut(s) 750
BanII GRGCYC 2 cut(s) 579, 2064
BauI CACGAG 1 cut(s) 433
BbsI GAAGAC 3 cut(s) 249, 543, 1956
Bbv12I GWGCWC 2 cut(s) 579, 718
BbvCI CCTCAGC 1 cut(s) 1482
BbvI GCAGC 2 cut(s) 181, 2156
BccI CCATC 6 cut(s) 389, 557, 1238, 1385, 1433, 1904
BceAI ACGGC 1 cut(s) 696
BciT130I CCWGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
BciVI GTATCC 1 cut(s) 2541
BclI TGATCA 3 cut(s) 1002, 1062, 1198
BcoDI GTCTC 4 cut(s) 783, 1151, 1727, 2584
BcuI ACTAGT 2 cut(s) 544, 2026
BfmI CTRYAG 4 cut(s) 167, 447, 521, 1818
BfrI CTTAAG 1 cut(s) 374
BfuI GTATCC 1 cut(s) 2541
BglI GCCNNNNNGGC 1 cut(s) 2068
BglII AGATCT 2 cut(s) 1353, 1822
BisI GCNGC 3 cut(s) 170, 2145, 2191
BlsI GCNGC 3 cut(s) 171, 2146, 2192
Bme1390I CCNGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
Bme18I GGWCC 1 cut(s) 641
BmgT120I GGNCC 3 cut(s) 151, 641, 2365
BmiI GGNNCC 3 cut(s) 642, 752, 1046
BmrFI CCNGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
BmrI ACTGGG 1 cut(s) 316
BmsI GCATC 4 cut(s) 1294, 1302, 1519, 2502
BmtI GCTAGC 2 cut(s) 1121, 1365
BmuI ACTGGG 1 cut(s) 316
BoxI GACNNNNGTC 1 cut(s) 639
BpiI GAAGAC 3 cut(s) 249, 543, 1956
BplI GAGNNNNNCTC 2 cut(s) 1434, 1466
BpmI CTGGAG 4 cut(s) 563, 1143, 1566, 1751
Bpu10I CCTNAGC 4 cut(s) 867, 1040, 1482, 1803
Bpu14I TTCGAA 1 cut(s) 915
BpuEI CTTGAG 4 cut(s) 574, 1253, 2270, 2471
BsaAI YACGTR 1 cut(s) 1321
BsaBI GATNNNNATC 3 cut(s) 1443, 1919, 2481
BsaJI CCNNGG 2 cut(s) 1761, 2063
BsaWI WCCGGW 1 cut(s) 643
BsaXI ACNNNNNCTCC 4 cut(s) 247, 277, 2362, 2392
Bsc4I CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2174, 2225, 2266
Bse1I ACTGG 8 cut(s) 251, 311, 712, 1206, 1574, 1598, 2390, 2542
Bse3DI GCAATG 2 cut(s) 512, 950
Bse8I GATNNNNATC 3 cut(s) 1443, 1919, 2481
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
BseDI CCNNGG 2 cut(s) 1761, 2063
BseGI GGATG 5 cut(s) 987, 1249, 1432, 1657, 1858
BseJI GATNNNNATC 3 cut(s) 1443, 1919, 2481
BseLI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2174, 2225, 2266
BseMI GCAATG 2 cut(s) 512, 950
BseMII CTCAG 7 cut(s) 189, 858, 1054, 1473, 1616, 1794, 2226
BseNI ACTGG 8 cut(s) 251, 311, 712, 1206, 1574, 1598, 2390, 2542
BseRI GAGGAG 4 cut(s) 573, 1139, 1274, 2048
BseSI GKGCMC 1 cut(s) 718
BseXI GCAGC 2 cut(s) 181, 2156
BsgI GTGCAG 1 cut(s) 1050
Bsh1236I CGCG 3 cut(s) 135, 471, 1671
Bsh1285I CGRYCG 2 cut(s) 133, 1456
BshFI GGCC 7 cut(s) 33, 153, 711, 1517, 2071, 2270, 2367
BsiEI CGRYCG 2 cut(s) 133, 1456
BsiHKAI GWGCWC 2 cut(s) 579, 718
BsiSI CCGG 1 cut(s) 644
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 8 cut(s) 306, 407, 638, 665, 698, 2174, 2225, 2266
BsmAI GTCTC 4 cut(s) 783, 1151, 1727, 2584
BsmBI CGTCTC 2 cut(s) 783, 1727
BsmFI GGGAC 1 cut(s) 82
BsmI GAATGC 2 cut(s) 1725, 2341
BsnI GGCC 7 cut(s) 33, 153, 711, 1517, 2071, 2270, 2367
Bsp119I TTCGAA 1 cut(s) 915
Bsp1286I GDGCHC 3 cut(s) 579, 718, 2064
Bsp13I TCCGGA 1 cut(s) 643
Bsp19I CCATGG 1 cut(s) 1761
BspACI CCGC 5 cut(s) 45, 469, 1163, 1669, 2191
BspANI GGCC 7 cut(s) 33, 153, 711, 1517, 2071, 2270, 2367
BspCNI CTCAG 7 cut(s) 190, 859, 1053, 1474, 1617, 1795, 2227
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 3 cut(s) 135, 471, 1671
BspHI TCATGA 1 cut(s) 762
BspLI GGNNCC 3 cut(s) 642, 752, 1046
BspMAI CTGCAG 2 cut(s) 171, 1822
BspOI GCTAGC 2 cut(s) 1121, 1365
BspPI GGATC 5 cut(s) 257, 725, 745, 758, 1922
BspQI GCTCTTC 1 cut(s) 2085
BspT104I TTCGAA 1 cut(s) 915
BspTI CTTAAG 1 cut(s) 374
BsrDI GCAATG 2 cut(s) 512, 950
BsrI ACTGG 8 cut(s) 251, 311, 712, 1206, 1574, 1598, 2390, 2542
BssECI CCNNGG 2 cut(s) 1761, 2063
BssSI CACGAG 1 cut(s) 433
BssT1I CCWWGG 1 cut(s) 1761
Bst2BI CACGAG 1 cut(s) 433
Bst2UI CCWGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
Bst4CI ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1741, 2163, 2305, 2576
Bst6I CTCTTC 4 cut(s) 691, 762, 2085, 2445
BstAFI CTTAAG 1 cut(s) 374
BstBAI YACGTR 1 cut(s) 1321
BstBI TTCGAA 1 cut(s) 915
BstDEI CTNAG 9 cut(s) 198, 769, 867, 1040, 1421, 1482, 1625, 1803, 2235
BstDSI CCRYGG 1 cut(s) 1761
BstEII GGTNACC 1 cut(s) 295
BstENI CCTNNNNNAGG 2 cut(s) 696, 2172
BstF5I GGATG 5 cut(s) 987, 1249, 1432, 1657, 1858
BstFNI CGCG 3 cut(s) 135, 471, 1671
BstMAI GTCTC 4 cut(s) 783, 1151, 1727, 2584
BstMCI CGRYCG 2 cut(s) 133, 1456
BstMWI GCNNNNNNNGC 8 cut(s) 188, 1529, 1757, 1817, 2068, 2077, 2141, 2411
BstNI CCWGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
BstPAI GACNNNNGTC 1 cut(s) 639
BstPI GGTNACC 1 cut(s) 295
BstSCI CCNGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
BstSFI CTRYAG 4 cut(s) 167, 447, 521, 1818
BstSLI GKGCMC 1 cut(s) 718
BstUI CGCG 3 cut(s) 135, 471, 1671
BstV1I GCAGC 2 cut(s) 181, 2156
BstV2I GAAGAC 3 cut(s) 249, 543, 1956
BstX2I RGATCY 4 cut(s) 730, 750, 1353, 1822
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 4 cut(s) 730, 750, 1353, 1822
BsuI GTATCC 1 cut(s) 2541
BsuRI GGCC 7 cut(s) 33, 153, 711, 1517, 2071, 2270, 2367
BtgI CCRYGG 1 cut(s) 1761
BtsCI GGATG 5 cut(s) 987, 1249, 1432, 1657, 1858
BtsI GCAGTG 5 cut(s) 745, 1370, 1471, 2196, 2286
CaiI CAGNNNCTG 2 cut(s) 71, 1569
CciI TCATGA 1 cut(s) 762
Cfr13I GGNCC 3 cut(s) 151, 641, 2365
CseI GACGC 1 cut(s) 2405
Csp6I GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2164
CspCI CAANNNNNGTGG 4 cut(s) 1702, 1737, 1997, 2032
CviQI GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2164
DdeI CTNAG 9 cut(s) 198, 769, 867, 1040, 1421, 1482, 1625, 1803, 2235
EaeI YGGCCR 2 cut(s) 709, 1515
Eam1104I CTCTTC 4 cut(s) 691, 762, 2085, 2445
EarI CTCTTC 4 cut(s) 691, 762, 2085, 2445
EciI GGCGGA 1 cut(s) 1152
Ecl136II GAGCTC 1 cut(s) 577
Eco130I CCWWGG 1 cut(s) 1761
Eco147I AGGCCT 1 cut(s) 2270
Eco24I GRGCYC 2 cut(s) 579, 2064
Eco47I GGWCC 1 cut(s) 641
Eco53kI GAGCTC 1 cut(s) 577
Eco57I CTGAAG 2 cut(s) 978, 1077
Eco91I GGTNACC 1 cut(s) 295
EcoICRI GAGCTC 1 cut(s) 577
EcoNI CCTNNNNNAGG 2 cut(s) 696, 2172
EcoO65I GGTNACC 1 cut(s) 295
EcoRI GAATTC 2 cut(s) 945, 2565
EcoRII CCWGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
EcoT14I CCWWGG 1 cut(s) 1761
EcoT22I ATGCAT 1 cut(s) 1309
EcoT38I GRGCYC 2 cut(s) 579, 2064
ErhI CCWWGG 1 cut(s) 1761
Esp3I CGTCTC 2 cut(s) 783, 1727
FaqI GGGAC 1 cut(s) 82
FauNDI CATATG 2 cut(s) 1505, 2120
FbaI TGATCA 3 cut(s) 1002, 1062, 1198
FblI GTMKAC 1 cut(s) 1873
Fnu4HI GCNGC 3 cut(s) 170, 2145, 2191
FokI GGATG 5 cut(s) 974, 1256, 1419, 1644, 1865
FriOI GRGCYC 2 cut(s) 579, 2064
Fsp4HI GCNGC 3 cut(s) 170, 2145, 2191
GluI GCNGC 3 cut(s) 170, 2145, 2191
GsuI CTGGAG 4 cut(s) 563, 1143, 1566, 1751
HaeIII GGCC 7 cut(s) 33, 153, 711, 1517, 2071, 2270, 2367
HapII CCGG 1 cut(s) 644
HgaI GACGC 1 cut(s) 2405
HincII GTYRAC 3 cut(s) 484, 1138, 2152
HindII GTYRAC 3 cut(s) 484, 1138, 2152
HindIII AAGCTT 4 cut(s) 1423, 1521, 1649, 2412
HinfI GANTC 8 cut(s) 194, 281, 725, 892, 1541, 2211, 2252, 2482
HpaI GTTAAC 1 cut(s) 484
HpaII CCGG 1 cut(s) 644
HphI GGTGA 8 cut(s) 244, 347, 416, 1208, 1423, 1628, 2057, 2552
Hpy188I TCNGA 6 cut(s) 199, 323, 730, 820, 1019, 2395
HpyAV CCTTC 5 cut(s) 932, 953, 1481, 2014, 2281
HpyCH4III ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1741, 2163, 2305, 2576
HpyCH4IV ACGT 1 cut(s) 1320
HpyF10VI GCNNNNNNNGC 8 cut(s) 188, 1529, 1757, 1817, 2068, 2077, 2141, 2411
HpyF3I CTNAG 9 cut(s) 198, 769, 867, 1040, 1421, 1482, 1625, 1803, 2235
HpySE526I ACGT 1 cut(s) 1320
Kpn2I TCCGGA 1 cut(s) 643
Ksp22I TGATCA 3 cut(s) 1002, 1062, 1198
KspAI GTTAAC 1 cut(s) 484
LguI GCTCTTC 1 cut(s) 2085
LmnI GCTCC 3 cut(s) 332, 582, 1505
Lsp1109I GCAGC 2 cut(s) 181, 2156
LweI GCATC 4 cut(s) 1294, 1302, 1519, 2502
MaeII ACGT 1 cut(s) 1320
MaeIII GTNAC 4 cut(s) 295, 428, 1565, 2045
MflI RGATCY 4 cut(s) 730, 750, 1353, 1822
MhlI GDGCHC 3 cut(s) 579, 718, 2064
MlsI TGGCCA 1 cut(s) 1517
MluNI TGGCCA 1 cut(s) 1517
MlyI GAGTC 4 cut(s) 734, 886, 1535, 2261
MmeI TCCRAC 4 cut(s) 78, 683, 2280, 2479
Mox20I TGGCCA 1 cut(s) 1517
Mph1103I ATGCAT 1 cut(s) 1309
MroI TCCGGA 1 cut(s) 643
MroXI GAANNNNTTC 1 cut(s) 396
MscI TGGCCA 1 cut(s) 1517
MseI TTAA 5 cut(s) 269, 375, 483, 927, 968
MslI CAYNNNNRTG 4 cut(s) 39, 1302, 1437, 1766
Msp20I TGGCCA 1 cut(s) 1517
MspA1I CMGCKG 2 cut(s) 1481, 2147
MspCI CTTAAG 1 cut(s) 374
MspI CCGG 1 cut(s) 644
MspR9I CCNGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
Mva1269I GAATGC 2 cut(s) 1725, 2341
MvaI CCWGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
MvnI CGCG 3 cut(s) 135, 471, 1671
MwoI GCNNNNNNNGC 8 cut(s) 188, 1529, 1757, 1817, 2068, 2077, 2141, 2411
NcoI CCATGG 1 cut(s) 1761
NdeI CATATG 2 cut(s) 1505, 2120
NheI GCTAGC 2 cut(s) 1117, 1361
NlaIV GGNNCC 3 cut(s) 642, 752, 1046
NmuCI GTSAC 2 cut(s) 1565, 2045
NsiI ATGCAT 1 cut(s) 1309
NspV TTCGAA 1 cut(s) 915
PagI TCATGA 1 cut(s) 762
PceI AGGCCT 1 cut(s) 2270
PciSI GCTCTTC 1 cut(s) 2085
PctI GAATGC 2 cut(s) 1725, 2341
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 4 cut(s) 194, 281, 2211, 2482
PflFI GACNNNGTC 1 cut(s) 593
PfoI TCCNGGA 2 cut(s) 328, 579
PkrI GCNGC 3 cut(s) 171, 2146, 2192
Ple19I CGATCG 1 cut(s) 133
PleI GAGTC 4 cut(s) 733, 886, 1535, 2260
PpsI GAGTC 4 cut(s) 733, 886, 1535, 2260
Ppu21I YACGTR 1 cut(s) 1321
PshAI GACNNNNGTC 1 cut(s) 639
Psp124BI GAGCTC 1 cut(s) 579
Psp6I CCWGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
PspEI GGTNACC 1 cut(s) 295
PspGI CCWGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
PspN4I GGNNCC 3 cut(s) 642, 752, 1046
PspPI GGNCC 3 cut(s) 151, 641, 2365
PstI CTGCAG 2 cut(s) 171, 1822
PstNI CAGNNNCTG 2 cut(s) 71, 1569
PsuI RGATCY 4 cut(s) 730, 750, 1353, 1822
PsyI GACNNNGTC 1 cut(s) 593
PvuI CGATCG 1 cut(s) 133
PvuII CAGCTG 2 cut(s) 1481, 2147
RsaI GTAC 8 cut(s) 52, 412, 443, 530, 549, 683, 924, 2165
RsaNI GTAC 8 cut(s) 51, 411, 442, 529, 548, 682, 923, 2164
RseI CAYNNNNRTG 4 cut(s) 39, 1302, 1437, 1766
SacI GAGCTC 1 cut(s) 579
SapI GCTCTTC 1 cut(s) 2085
SaqAI TTAA 5 cut(s) 269, 375, 483, 927, 968
SatI GCNGC 3 cut(s) 170, 2145, 2191
Sau96I GGNCC 3 cut(s) 151, 641, 2365
SchI GAGTC 4 cut(s) 734, 886, 1535, 2261
ScrFI CCNGG 6 cut(s) 330, 402, 581, 1699, 2014, 2065
SduI GDGCHC 3 cut(s) 579, 718, 2064
SfaNI GCATC 4 cut(s) 1294, 1302, 1519, 2502
SfcI CTRYAG 4 cut(s) 167, 447, 521, 1818
SfuI TTCGAA 1 cut(s) 915
SinI GGWCC 1 cut(s) 641
SmiMI CAYNNNNRTG 4 cut(s) 39, 1302, 1437, 1766
SmlI CTYRAG 5 cut(s) 374, 553, 1268, 2249, 2486
SmoI CTYRAG 5 cut(s) 374, 553, 1268, 2249, 2486
SpeI ACTAGT 2 cut(s) 544, 2026
SseBI AGGCCT 1 cut(s) 2270
SsiI CCGC 5 cut(s) 45, 469, 1163, 1669, 2191
SstI GAGCTC 1 cut(s) 579
StuI AGGCCT 1 cut(s) 2270
StyD4I CCNGG 6 cut(s) 328, 400, 579, 1697, 2012, 2063
StyI CCWWGG 1 cut(s) 1761
TaaI ACNGT 9 cut(s) 73, 362, 415, 1028, 1255, 1741, 2163, 2305, 2576
TaiI ACGT 1 cut(s) 1323
TaqI TCGA 7 cut(s) 129, 390, 694, 915, 1917, 2100, 2448
TaqII GACCGA 1 cut(s) 1442
TatI WGTACW 3 cut(s) 528, 547, 922
TauI GCSGC 1 cut(s) 2193
TfiI GAWTC 4 cut(s) 194, 281, 2211, 2482
Tru1I TTAA 5 cut(s) 269, 375, 483, 927, 968
Tru9I TTAA 5 cut(s) 269, 375, 483, 927, 968
TseFI GTSAC 2 cut(s) 1565, 2045
TseI GCWGC 2 cut(s) 169, 2144
Tsp45I GTSAC 2 cut(s) 1565, 2045
TspGWI ACGGA 1 cut(s) 2387
Tth111I GACNNNGTC 1 cut(s) 593
Vha464I CTTAAG 1 cut(s) 374
VneI GTGCAC 1 cut(s) 714
VpaK11BI GGWCC 1 cut(s) 641
XagI CCTNNNNNAGG 2 cut(s) 696, 2172
XapI RAATTY 5 cut(s) 945, 1011, 1100, 2328, 2565
XbaI TCTAGA 1 cut(s) 994
XcmI CCANNNNNNNNNTGG 2 cut(s) 1510, 2306
XmiI GTMKAC 1 cut(s) 1873
XmnI GAANNNNTTC 1 cut(s) 396
Zsp2I ATGCAT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.