Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000763

Physical Location & Seq

Genomic Coordinates Forward (+)

27110757 .. 27113553

Gene Structure 2797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG124900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGTTCCAAATCCCCATTGTCCCAAACATCATTGACAATCTCAGGAATGGTTCCAACAAGAAGATCAAAGGAACCGTGGTGCTGATGAAGAAGAATGCGTTGGACTTCAATGACTTTCATGCTTCGGTTCTCGACCGTGTGCATGAGTTGTTGGGCCAAGGCGTTTCTTTGCAGCTCATTAGTGCTGTTAATGGTGATTCTTCAAATGGGTCGCAAGGGAAACTCGGAAAAGTAGCATATTTGGAGAACTGGATTACCACACTCGGTCCGTTAACAGCAGGAGAGACTGCATTCAAGGTTACATTCGACGTTGAAGGCGAAATAGGAGTTCCAGGAGCATTCATAATAAGAAACAATCATCACAGTGAATTCTTCCTTAAGACGGTCACGCTCGAAGATGTTCCCGGTGCGGGTCAGATCCACTTTGTTTGCAACTCATGGGTCTACCCTGCATCGAAATACAAGAAAGACCGTATTTTCTTTGCTAACAAGACGTATCTTCCGAATGATACACCATTGCCACTACGCAAATACAGACAACAGGAACTTGAGCAGTTAAGAGGAAATGGAACAGGAGAGCTCAAGGAATGGGACAGGGTCTACGACTATGCTTACTACAATGATCTCGGTGACCCAGACAAGGGTTCCAACTATGCCCGTCCAGTTCTAGGGGGGTCTAGCCAGTACCCTTACCCTCGTAGAGGAAGAACCGGTCGACCACCAACAAGGACAGATCCCAACTGCGAGAGTAGGATCCCTCTTCTGATGAGCTTAGACATTTATGTTCCGAGAGATGAACGATTCGGGCACTTGAAGATGTCCGACTTCCTTGCTTATGCACTGAAATCTTTGGTTCAGTTCGTTAGACCAGAGCTACAAGCTGTGTTTGATAAAACTCCCAACGAGTTTGACAGCTTTCAAGATGTTCTTAACCTCTATGAAGGAGGGTTTCCGTTGCCTGAAGGTTTATTAAAGGATATTGGCGACAACATTCCTTTGCCAATGATCAAGGAAATTTTCCGAACTGACGGTGAACGATTCCTTAGATTCCCAGTGCCTCAAGTGATCAAAGAGGATAGGACTGCTTGGAGGACTGATGAAGAATTTGCCAGAGAAATGCTTGCTGGAGTCAACCCTGTCACTATTCGTCGCCTCCAAGAGTTTCCACCAGCAAGTAAACTAGATCCAAAAGTTTATGGTGATCACAGCAGTACCATAACAGAACAGCACATCAAGAAAAACTTGGACGGGCTAACAGTTCATCAGGCACTCAGGGACAACAGGTTATTCATATTAGACCACCATGATGCTTTCATGCCGTACCTGAGGCGGATAAACACTACTGGAAACAGGATCTATGGCAGCAGAACACTCCTTTTCTTGAAAAGTGATGGGACTTTGAAGCCATTGGTGATTGAACTAAGCTTGCCTCATCCTGATGGAGATCGATATGGTTGCACTAGCAAAGTATATACACCAGCTGAACATGGTGTTGAGAGCTCCATTTGGCAACTGGCTAAAGCTTATGTGGCTGTAAATGACTCTGGATTTCATCAACTGATCAGTCATTGGTATAATTACTTCAGTCCTGTTAGAGAATTAGAGCTTAGAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0044424 GO:0044464 GO:0051213 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

538

Amino Acids

61.23

Weight (kDa)

6.75

Isoelectric Point (pI)

36.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	57 - 161	5.9e-23	PLAT/LH2 domain
Lipoxygenase	PF00305	174 - 526	6.3e-147	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55020
fragaria_vesca	FvH4_4g09530 FvH4_6g06090 FvH4_6g06090 FvH4_6g06090 FvH4_6g06100
malus_domestica	MD04G1204000.v1.1 MD04G1204100.v1.1 MD04G1204200.v1.1 MD04G1204500.v1.1 MD04G1204600.v1.1 MD09G1069500.v1.1 MD12G1218000.v1.1 MD12G1218200.v1.1 MD12G1218300.v1.1
prunus_persica	Prupe.6G324100_v2.0.a1 Prupe.6G324100_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324300_v2.0.a1 Prupe.6G324400_v2.0.a1 Prupe.6G324600_v2.0.a1 Prupe.6G324600_v2.0.a1
pyrus_communis	pycom04g18050 pycom04g18060 pycom12433g00060 pycom12g20350 pycom12g20380 pycom12g20390
rosa_chinensis	RchiOBHm_Chr3g0455091 RchiOBHm_Chr3g0455111 RchiOBHm_Chr3g0455121 RchiOBHm_Chr4g0404751
rosa_laevigata	RLG00000008903 RLG00000010665 RLG00000025386 RLG00000025387 RLG00000025389
rosa_multiflora	Rmu_co8490177.1_g000001 Rmu_sc0001179.1_g000031 Rmu_sc0002169.1_g000019 Rmu_sc0002169.1_g000023 Rmu_sc0002169.1_g000024 Rmu_sc0002502.1_g000004
rosa_roxburghii	Rroxscaffold_5G00348930 Rroxscaffold_6G00424550 Rroxscaffold_6G00424560 Rroxscaffold_6G00424570 Rroxscaffold_7G00160420 Rroxscaffold_7G00160500
rosa_rugosa	Rorug03G0004000 Rorug03G0004000 Rorug04G0049200
rosa_samantha	Rh3AG064600 Rh3AG064700 Rh3AG064800 Rh3BG066700 Rh3CG065100 Rh3CG065200 Rh3DG066300 Rh3DG066600 Rh3DG066700 Rh4AG124900 Rh4CG133100 Rh4DG118900
rosa_wichuraiana	Rw3G005050 Rw3G005060 Rw3G005070 Rw4G010130 Rw6G041270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	444, 600, 715
AciI	CCGC	2 cut(s)	410, 1330
AclWI	GGATC	6 cut(s)	412, 728, 748, 761, 1178, 1361
AcsI	RAATTY	3 cut(s)	368, 1014, 1103
AcuI	CTGAAG	2 cut(s)	981, 1567
AfaI	GTAC	3 cut(s)	686, 1213, 1322
AfiI	CCNNNNNNNGG	6 cut(s)	382, 410, 640, 641, 668, 701
AflII	CTTAAG	1 cut(s)	377
AgeI	ACCGGT	1 cut(s)	710
AgsI	TTSAA	9 cut(s)	109, 204, 295, 314, 814, 920, 1384, 1402, 1418
AjnI	CCWGG	1 cut(s)	331
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
Alw21I	GWGCWC	2 cut(s)	582, 1502
Alw26I	GTCTC	1 cut(s)	278
AlwI	GGATC	6 cut(s)	412, 728, 748, 761, 1178, 1361
AoxI	GGCC	1 cut(s)	154
ApeKI	GCWGC	2 cut(s)	172, 1362
ApoI	RAATTY	3 cut(s)	368, 1014, 1103
AsiGI	ACCGGT	1 cut(s)	710
Asp700I	GAANNNNTTC	1 cut(s)	399
AspS9I	GGNCC	2 cut(s)	154, 266
AsuC2I	CCSGG	1 cut(s)	405
AsuHPI	GGTGA	5 cut(s)	206, 641, 1043, 1211, 1423
AvaII	GGWCC	1 cut(s)	266
AxyI	CCTNAGG	1 cut(s)	1325
BaeGI	GKGCMC	1 cut(s)	810
BaeI	ACNNNNGTAYC	2 cut(s)	1195, 1228
BamHI	GGATCC	1 cut(s)	753
BanII	GRGCYC	2 cut(s)	582, 1502
BarI	GAAGNNNNNNTAC	2 cut(s)	1565, 1597
Bbv12I	GWGCWC	2 cut(s)	582, 1502
BbvI	GCAGC	2 cut(s)	184, 1374
BccI	CCATC	2 cut(s)	1385, 1433
BceAI	ACGGC	1 cut(s)	1303
BcgI	CGANNNNNNTGC	4 cut(s)	812, 846, 1437, 1471
BciT130I	CCWGG	1 cut(s)	333
BclI	TGATCA	4 cut(s)	1005, 1065, 1201, 1560
BcnI	CCSGG	1 cut(s)	405
BcoDI	GTCTC	1 cut(s)	278
BfaI	CTAG	4 cut(s)	668, 678, 1181, 1461
BfrI	CTTAAG	1 cut(s)	377
BisI	GCNGC	2 cut(s)	173, 1363
BlsI	GCNGC	2 cut(s)	174, 1364
Bme1390I	CCNGG	2 cut(s)	333, 405
Bme18I	GGWCC	1 cut(s)	266
BmgT120I	GGNCC	2 cut(s)	154, 266
BmiI	GGNNCC	4 cut(s)	52, 73, 646, 755
BmrFI	CCNGG	2 cut(s)	333, 405
BmrI	ACTGGG	1 cut(s)	1046
BmsI	GCATC	2 cut(s)	461, 1297
BmuI	ACTGGG	1 cut(s)	1046
BpmI	CTGGAG	1 cut(s)	1146
BpuEI	CTTGAG	3 cut(s)	566, 569, 1044
BpuMI	CCSGG	1 cut(s)	405
Bsa29I	ATCGAT	1 cut(s)	1447
BsaBI	GATNNNNATC	1 cut(s)	1443
BsaJI	CCNNGG	2 cut(s)	75, 157
BsaWI	WCCGGW	1 cut(s)	710
Bsc4I	CCNNNNNNNGG	6 cut(s)	382, 410, 640, 641, 668, 701
Bse118I	RCCGGY	1 cut(s)	710
Bse1I	ACTGG	6 cut(s)	254, 662, 682, 1052, 1348, 1518
Bse21I	CCTNAGG	1 cut(s)	1325
Bse3DI	GCAATG	1 cut(s)	515
Bse8I	GATNNNNATC	1 cut(s)	1443
BseBI	CCWGG	1 cut(s)	333
BseCI	ATCGAT	1 cut(s)	1447
BseDI	CCNNGG	2 cut(s)	75, 157
BseGI	GGATG	1 cut(s)	1432
BseJI	GATNNNNATC	1 cut(s)	1443
BseLI	CCNNNNNNNGG	6 cut(s)	382, 410, 640, 641, 668, 701
BseMI	GCAATG	1 cut(s)	515
BseMII	CTCAG	3 cut(s)	55, 1285, 1316
BseNI	ACTGG	6 cut(s)	254, 662, 682, 1052, 1348, 1518
BseSI	GKGCMC	1 cut(s)	810
BseXI	GCAGC	2 cut(s)	184, 1374
Bsh1285I	CGRYCG	2 cut(s)	136, 715
BshFI	GGCC	1 cut(s)	156
BshTI	ACCGGT	1 cut(s)	710
BshVI	ATCGAT	1 cut(s)	1447
BsiEI	CGRYCG	2 cut(s)	136, 715
BsiHKAI	GWGCWC	2 cut(s)	582, 1502
BsiSI	CCGG	2 cut(s)	405, 711
BslFI	GGGAC	4 cut(s)	5, 605, 1289, 1408
BslI	CCNNNNNNNGG	6 cut(s)	382, 410, 640, 641, 668, 701
BsmAI	GTCTC	1 cut(s)	278
BsmFI	GGGAC	4 cut(s)	5, 605, 1289, 1408
BsmI	GAATGC	3 cut(s)	100, 290, 338
BsnI	GGCC	1 cut(s)	156
Bsp1286I	GDGCHC	3 cut(s)	582, 810, 1502
BspACI	CCGC	2 cut(s)	410, 1330
BspANI	GGCC	1 cut(s)	156
BspCNI	CTCAG	3 cut(s)	54, 1284, 1317
BspDI	ATCGAT	1 cut(s)	1447
BspLI	GGNNCC	4 cut(s)	52, 73, 646, 755
BspPI	GGATC	6 cut(s)	412, 728, 748, 761, 1178, 1361
BspTI	CTTAAG	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	515
BsrFI	RCCGGY	1 cut(s)	710
BsrI	ACTGG	6 cut(s)	254, 662, 682, 1052, 1348, 1518
BssAI	RCCGGY	1 cut(s)	710
BssECI	CCNNGG	2 cut(s)	75, 157
BssT1I	CCWWGG	1 cut(s)	157
Bst2UI	CCWGG	1 cut(s)	333
Bst4CI	ACNGT	7 cut(s)	76, 137, 365, 385, 473, 1031, 1258
Bst6I	CTCTTC	1 cut(s)	765
BstAFI	CTTAAG	1 cut(s)	377
BstC8I	GCNNGC	2 cut(s)	1122, 1427
BstDEI	CTNAG	7 cut(s)	41, 772, 1043, 1271, 1325, 1421, 1607
BstDSI	CCRYGG	1 cut(s)	75
BstEII	GGTNACC	1 cut(s)	629
BstENI	CCTNNNNNAGG	1 cut(s)	699
BstF5I	GGATG	1 cut(s)	1432
BstMAI	GTCTC	1 cut(s)	278
BstMCI	CGRYCG	2 cut(s)	136, 715
BstMWI	GCNNNNNNNGC	1 cut(s)	1529
BstNI	CCWGG	1 cut(s)	333
BstPI	GGTNACC	1 cut(s)	629
BstSCI	CCNGG	2 cut(s)	331, 403
BstSLI	GKGCMC	1 cut(s)	810
BstV1I	GCAGC	2 cut(s)	184, 1374
BstX2I	RGATCY	5 cut(s)	417, 733, 753, 1183, 1353
BstYI	RGATCY	5 cut(s)	417, 733, 753, 1183, 1353
Bsu15I	ATCGAT	1 cut(s)	1447
Bsu36I	CCTNAGG	1 cut(s)	1325
BsuRI	GGCC	1 cut(s)	156
BsuTUI	ATCGAT	1 cut(s)	1447
BtgI	CCRYGG	1 cut(s)	75
BtsCI	GGATG	1 cut(s)	1432
BtsIMutI	CAGTG	3 cut(s)	370, 839, 1059
Cac8I	GCNNGC	2 cut(s)	1122, 1427
Cfr10I	RCCGGY	1 cut(s)	710
Cfr13I	GGNCC	2 cut(s)	154, 266
ClaI	ATCGAT	1 cut(s)	1447
CpoI	CGGWCCG	1 cut(s)	266
Csp6I	GTAC	3 cut(s)	685, 1212, 1321
CspAI	ACCGGT	1 cut(s)	710
CspCI	CAANNNNNGTGG	2 cut(s)	410, 445
CspI	CGGWCCG	1 cut(s)	266
CviAII	CATG	6 cut(s)	119, 143, 438, 1304, 1315, 1487
CviQI	GTAC	3 cut(s)	685, 1212, 1321
DdeI	CTNAG	7 cut(s)	41, 772, 1043, 1271, 1325, 1421, 1607
Eam1104I	CTCTTC	1 cut(s)	765
EarI	CTCTTC	1 cut(s)	765
EciI	GGCGGA	1 cut(s)	1345
Ecl136II	GAGCTC	2 cut(s)	580, 1500
Eco130I	CCWWGG	1 cut(s)	157
Eco24I	GRGCYC	2 cut(s)	582, 1502
Eco47I	GGWCC	1 cut(s)	266
Eco53kI	GAGCTC	2 cut(s)	580, 1500
Eco57I	CTGAAG	2 cut(s)	981, 1567
Eco81I	CCTNAGG	1 cut(s)	1325
Eco91I	GGTNACC	1 cut(s)	629
EcoICRI	GAGCTC	2 cut(s)	580, 1500
EcoNI	CCTNNNNNAGG	1 cut(s)	699
EcoO65I	GGTNACC	1 cut(s)	629
EcoRI	GAATTC	1 cut(s)	368
EcoRII	CCWGG	1 cut(s)	331
EcoT14I	CCWWGG	1 cut(s)	157
EcoT38I	GRGCYC	2 cut(s)	582, 1502
ErhI	CCWWGG	1 cut(s)	157
FaeI	CATG	6 cut(s)	122, 146, 441, 1307, 1318, 1490
FalI	AAGNNNNNCTT	4 cut(s)	912, 944, 1226, 1258
FaqI	GGGAC	4 cut(s)	5, 605, 1289, 1408
FatI	CATG	6 cut(s)	118, 142, 437, 1303, 1314, 1486
FauI	CCCGC	1 cut(s)	403
FbaI	TGATCA	4 cut(s)	1005, 1065, 1201, 1560
FblI	GTMKAC	3 cut(s)	444, 600, 715
Fnu4HI	GCNGC	2 cut(s)	173, 1363
FokI	GGATG	1 cut(s)	1419
FriOI	GRGCYC	2 cut(s)	582, 1502
Fsp4HI	GCNGC	2 cut(s)	173, 1363
FspBI	CTAG	4 cut(s)	668, 678, 1181, 1461
GluI	GCNGC	2 cut(s)	173, 1363
GsuI	CTGGAG	1 cut(s)	1146
HaeIII	GGCC	1 cut(s)	156
HapII	CCGG	2 cut(s)	405, 711
Hin1II	CATG	6 cut(s)	122, 146, 441, 1307, 1318, 1490
HincII	GTYRAC	3 cut(s)	273, 716, 1132
HindII	GTYRAC	3 cut(s)	273, 716, 1132
HindIII	AAGCTT	2 cut(s)	1423, 1521
HinfI	GANTC	6 cut(s)	197, 801, 1038, 1047, 1128, 1541
HpaI	GTTAAC	1 cut(s)	273
HpaII	CCGG	2 cut(s)	405, 711
HphI	GGTGA	5 cut(s)	206, 641, 1043, 1211, 1423
Hpy166II	GTNNAC	7 cut(s)	273, 445, 601, 716, 1034, 1132, 1178
Hpy188I	TCNGA	7 cut(s)	227, 417, 504, 765, 789, 823, 1022
Hpy188III	TCNNGA	7 cut(s)	43, 131, 920, 1234, 1381, 1436, 1545
Hpy8I	GTNNAC	7 cut(s)	273, 445, 601, 716, 1034, 1132, 1178
Hpy99I	CGWCG	2 cut(s)	311, 1152
HpyAV	CCTTC	3 cut(s)	308, 935, 956
HpyCH4III	ACNGT	7 cut(s)	76, 137, 365, 385, 473, 1031, 1258
HpyCH4IV	ACGT	2 cut(s)	309, 494
HpyCH4V	TGCA	7 cut(s)	142, 172, 290, 432, 452, 839, 1458
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1529
HpyF3I	CTNAG	7 cut(s)	41, 772, 1043, 1271, 1325, 1421, 1607
HpySE526I	ACGT	2 cut(s)	309, 494
Hsp92II	CATG	6 cut(s)	122, 146, 441, 1307, 1318, 1490
Ksp22I	TGATCA	4 cut(s)	1005, 1065, 1201, 1560
KspAI	GTTAAC	1 cut(s)	273
LmnI	GCTCC	2 cut(s)	335, 1505
Lsp1109I	GCAGC	2 cut(s)	184, 1374
LweI	GCATC	2 cut(s)	461, 1297
MaeI	CTAG	4 cut(s)	668, 678, 1181, 1461
MaeII	ACGT	2 cut(s)	309, 494
MaeIII	GTNAC	4 cut(s)	298, 385, 629, 1138
MflI	RGATCY	5 cut(s)	417, 733, 753, 1183, 1353
MhlI	GDGCHC	3 cut(s)	582, 810, 1502
MluCI	AATT	5 cut(s)	368, 1014, 1103, 1576, 1598
MlyI	GAGTC	2 cut(s)	1137, 1535
MmeI	TCCRAC	4 cut(s)	78, 81, 672, 846
MroXI	GAANNNNTTC	1 cut(s)	399
MseI	TTAA	7 cut(s)	189, 272, 378, 557, 930, 971, 1615
MslI	CAYNNNNRTG	3 cut(s)	363, 1305, 1437
MspA1I	CMGCKG	1 cut(s)	1481
MspCI	CTTAAG	1 cut(s)	377
MspI	CCGG	2 cut(s)	405, 711
MspR9I	CCNGG	2 cut(s)	333, 405
Mva1269I	GAATGC	3 cut(s)	100, 290, 338
MvaI	CCWGG	1 cut(s)	333
MwoI	GCNNNNNNNGC	1 cut(s)	1529
NciI	CCSGG	1 cut(s)	405
NlaIII	CATG	6 cut(s)	122, 146, 441, 1307, 1318, 1490
NlaIV	GGNNCC	4 cut(s)	52, 73, 646, 755
NmuCI	GTSAC	3 cut(s)	385, 629, 1138
PcsI	WCGNNNNNNNCGW	2 cut(s)	315, 500
PctI	GAATGC	3 cut(s)	100, 290, 338
PdmI	GAANNNNTTC	1 cut(s)	399
PfeI	GAWTC	4 cut(s)	197, 801, 1038, 1047
PflFI	GACNNNGTC	1 cut(s)	596
PfoI	TCCNGGA	1 cut(s)	331
PinAI	ACCGGT	1 cut(s)	710
PkrI	GCNGC	2 cut(s)	174, 1364
PleI	GAGTC	2 cut(s)	1136, 1535
PpsI	GAGTC	2 cut(s)	1136, 1535
Psp124BI	GAGCTC	2 cut(s)	582, 1502
Psp6I	CCWGG	1 cut(s)	331
PspEI	GGTNACC	1 cut(s)	629
PspGI	CCWGG	1 cut(s)	331
PspN4I	GGNNCC	4 cut(s)	52, 73, 646, 755
PspPI	GGNCC	2 cut(s)	154, 266
PsuI	RGATCY	5 cut(s)	417, 733, 753, 1183, 1353
PsyI	GACNNNGTC	1 cut(s)	596
PvuII	CAGCTG	1 cut(s)	1481
RsaI	GTAC	3 cut(s)	686, 1213, 1322
RsaNI	GTAC	3 cut(s)	685, 1212, 1321
RseI	CAYNNNNRTG	3 cut(s)	363, 1305, 1437
Rsr2I	CGGWCCG	1 cut(s)	266
RsrII	CGGWCCG	1 cut(s)	266
SacI	GAGCTC	2 cut(s)	582, 1502
SalI	GTCGAC	1 cut(s)	714
SaqAI	TTAA	7 cut(s)	189, 272, 378, 557, 930, 971, 1615
SatI	GCNGC	2 cut(s)	173, 1363
Sau96I	GGNCC	2 cut(s)	154, 266
SchI	GAGTC	2 cut(s)	1137, 1535
ScrFI	CCNGG	2 cut(s)	333, 405
SduI	GDGCHC	3 cut(s)	582, 810, 1502
SfaNI	GCATC	2 cut(s)	461, 1297
SinI	GGWCC	1 cut(s)	266
SmiMI	CAYNNNNRTG	3 cut(s)	363, 1305, 1437
SmlI	CTYRAG	4 cut(s)	377, 548, 581, 1059
SmoI	CTYRAG	4 cut(s)	377, 548, 581, 1059
Sse9I	AATT	5 cut(s)	368, 1014, 1103, 1576, 1598
SsiI	CCGC	2 cut(s)	410, 1330
SspMI	CTAG	4 cut(s)	668, 678, 1181, 1461
SstI	GAGCTC	2 cut(s)	582, 1502
StyD4I	CCNGG	2 cut(s)	331, 403
StyI	CCWWGG	1 cut(s)	157
TaaI	ACNGT	7 cut(s)	76, 137, 365, 385, 473, 1031, 1258
TaiI	ACGT	2 cut(s)	312, 497
TaqI	TCGA	6 cut(s)	132, 306, 393, 455, 715, 1447
TaqII	GACCGA	1 cut(s)	254
TasI	AATT	5 cut(s)	368, 1014, 1103, 1576, 1598
TfiI	GAWTC	4 cut(s)	197, 801, 1038, 1047
Tru1I	TTAA	7 cut(s)	189, 272, 378, 557, 930, 971, 1615
Tru9I	TTAA	7 cut(s)	189, 272, 378, 557, 930, 971, 1615
TscAI	CASTG	3 cut(s)	370, 846, 1059
TseFI	GTSAC	3 cut(s)	385, 629, 1138
TseI	GCWGC	2 cut(s)	172, 1362
Tsp45I	GTSAC	3 cut(s)	385, 629, 1138
TspGWI	ACGGA	2 cut(s)	258, 942
TspRI	CASTG	3 cut(s)	370, 846, 1059
Tth111I	GACNNNGTC	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	266
XagI	CCTNNNNNAGG	1 cut(s)	699
XapI	RAATTY	3 cut(s)	368, 1014, 1103
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1510
XmiI	GTMKAC	3 cut(s)	444, 600, 715
XmnI	GAANNNNTTC	1 cut(s)	399
XspI	CTAG	4 cut(s)	668, 678, 1181, 1461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.