Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000763

Physical Location & Seq

Genomic Coordinates Reverse (-)

28580035 .. 28585076

Gene Structure 5042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G324400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGTTGCACAACCTCTTTGACAAAATCACAGGCCAGGAGCAGAATGGGAAAAACAGTAGGAAGATCAAAGGGACTGTGGTTTTGATGAAGAAGAATGTGTTGGATTTCAATGACTTCAATGCTTCTGTTCTTGATCGTGTGCATGAACTGCTAGGCCAAGGGGTTTCTCTGCAGCTCATCAGTGCTGATCATGGAGACTCTGAAAACGGGTTTAAGGGGAAACTTGGAGAGCCAGCATATCTGGAAGACTGGATCACCACAATCACTCCATTAACAGTTGGAGATTCTGCATACAAGGTTACCTTTGACTGGGAAGAGGAAATAGGAGTTCCAGGAGCCATCTTGATAAAAAACAATCATCACAGTGAGTTCTTCCTTAAGACTATTACCCTTGAAGATGTTCCTCGTGAGGGCCGGGTCCACTTTGTTTGCAACTCATGGGTGTACCCTGCAGAAAAATACACGAAGGACCGTGTTTTCTTCGTTAACAAGACATTTCTCCCAAGTGAAACACCGTTGCCACTGCGAAAATACAGAGAAGAAGAACTTGTACACTTGAGAGGAGATGGAAAGGGAGAGCTCCAGGAATGGGACAGGGTCTATGACTATGCTTACTACAATGATCTAGGGAACCCTGATAAGGGTCCCAAATACGCCCGACCAACTCTGGGGGGGTCTAGCGAGTACCCTTACCCTCGCAGGGGAAGAACCGGCAGACCACCAACGAAGACAGATTCTAACAGCGAGAGTAGGATTCCACTTCTTATGAGCTTAAACATTTATGTGCCAAGAGATGAACGATTTGGACACTTGAAGTTGTCAGACTTTCTGGCTTATGCACTGAAATCCATAGTTCAATTCATTAGGCCAGAGCTAGAAGCCCTGTTTGATAAGACTCCTAATGAGTTTGACAGCTTGGAAGATGTGCTTAAACTCTATGAAGGAGGCATTCCATTGCCTGAAGGTTTATTGAAGGATATCGGAGACAATATCCCTGCAGAGATGCTCAAGGAAATTTTCCGAACTGACGGTGCACAATTGCTCAGATTCCCCATGCCTCAAGTGATCGAAGAGGATAAGTCTGCATGGAGGACTGATGAAGAATTTGCCAGAGAAATGCTGGCTGGAGTGAACCCTGTCAACATTAGTCTTCTGCAAGAATTTCCACCAGCAAGCAAACTAGACCCAAAAGTTTATGGAGATCAAACCAGTAGAATAACAGAACAGGATATAGGGAACAACTTGGATGGACTAACAGTGCATGAGGCACTCAAGCAGAACAAGTTATTCATATTGGATCATCATGATGCATTGATGCCGTACCTGAGGCGGATAAACTCAACTTCCAACAAGATCTATGCTAGCAGAACAGTTCTTTTCTTGAAAAGTGATGGAACTTTGAAGCCATTGGTGATTGAATTAAGCTTGCCTCATCCTGATGGAGATCAATTTGGTCGCATTAGTAAAGTATATACACCAGCTGAAGAGGGTGTAGAAGGCTCCATATGGCAACTGGCTAAAGCTTACGTGGCTGTAAATGACTCTGGATATCATCAACTTATCAGTCACTGGTTGAACACCCACGCAGTGTGTGAGCCAGTTGTAATAGCTACAAACAGGCAGCTAAGCGTGGTTCACCCAATTTACAAACTTCTGCATCCTCACTTCCGTGACACCATGAACATAAATGCATTTGCCAGGCAAATCCTGATTAATGCTGGCGGCATTCTGGAGACAACAGTTTTTCCTGCTAGGTATGCCATGGAGATGTCATCAGTGGTTTATAAGGATTGGGTTTTCACCGAGCAAGCTCTCCCTGCAGATCTCATCAAGAGAGGAGTTGCAGTCAAGGATGCAAATTCTCCACATGGTCTTCGCCTACTGATCGATGACTATCCATATGCTGTTGATGGGATTGAAATCTGGTTTGCAATTAAAACTTGGGTTGAAGACTATTGCTCTTTCTACTACAAGACTGATGACATAATTCAAAAAGACATTGAACTCCAATCCTGGTGGAAGGAGCTTGTAGAGGAAGGCCATGGTGACAAAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTCGCGAAGACCTAGTAGAAACATGCACTATCATCATATGGACTGCTTCTGCTCTCCATGCAGCCGTCAACTTTGGACAGTACCCTTATGCAGGATACCTCCCCAACCGCCCAACTATAAGCCGAAAATTCATGCCTGAGAAGGGGACTCCTGAGTACAAAGAGCTCGAATCCAGCCCTGATACAGTTTTCTTGAAAACAATTACTGCTCAGCTGCAGACAGTGCTTGGCATTGCCCTCATTGAAATTCTGTCGAGGCATTCTACTGATGAAGTGTATTTGGGGCAGAGAGACACTCCTGAGTGGACAGCAGACACAGAACCATTGAAAGCCTTTGATAAATTTGGAAGGAAACTGGCTGAAATTGAGGACAGAATTACACGTATGAACAATGATGAGAAACTGAAGAACCGAGTTGGACCGGTGAAGATGCCATACACTTTGCTGTTTCCTACTAGCGAAGGAGGACTAACTGGCAGGGGAATTCCCAACAGTGTCTCAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0044424 GO:0044464 GO:0051213 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

863

Amino Acids

98.12

Weight (kDa)

5.46

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55020
fragaria_vesca	FvH4_4g09530 FvH4_6g06090 FvH4_6g06090 FvH4_6g06090 FvH4_6g06100
malus_domestica	MD04G1204000.v1.1 MD04G1204100.v1.1 MD04G1204200.v1.1 MD04G1204500.v1.1 MD04G1204600.v1.1 MD09G1069500.v1.1 MD12G1218000.v1.1 MD12G1218200.v1.1 MD12G1218300.v1.1
prunus_persica	Prupe.6G324100_v2.0.a1 Prupe.6G324100_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324200_v2.0.a1 Prupe.6G324300_v2.0.a1 Prupe.6G324400_v2.0.a1 Prupe.6G324600_v2.0.a1 Prupe.6G324600_v2.0.a1
pyrus_communis	pycom04g18050 pycom04g18060 pycom12433g00060 pycom12g20350 pycom12g20380 pycom12g20390
rosa_chinensis	RchiOBHm_Chr3g0455091 RchiOBHm_Chr3g0455111 RchiOBHm_Chr3g0455121 RchiOBHm_Chr4g0404751
rosa_laevigata	RLG00000008903 RLG00000010665 RLG00000025386 RLG00000025387 RLG00000025389
rosa_multiflora	Rmu_co8490177.1_g000001 Rmu_sc0001179.1_g000031 Rmu_sc0002169.1_g000019 Rmu_sc0002169.1_g000023 Rmu_sc0002169.1_g000024 Rmu_sc0002502.1_g000004
rosa_roxburghii	Rroxscaffold_5G00348930 Rroxscaffold_6G00424550 Rroxscaffold_6G00424560 Rroxscaffold_6G00424570 Rroxscaffold_7G00160420 Rroxscaffold_7G00160500
rosa_rugosa	Rorug03G0004000 Rorug03G0004000 Rorug04G0049200
rosa_samantha	Rh3AG064600 Rh3AG064700 Rh3AG064800 Rh3BG066700 Rh3CG065100 Rh3CG065200 Rh3DG066300 Rh3DG066600 Rh3DG066700 Rh4AG124900 Rh4CG133100 Rh4DG118900
rosa_wichuraiana	Rw3G005050 Rw3G005060 Rw3G005070 Rw4G010130 Rw6G041270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1785
AccII	CGCG	1 cut(s)	2088
AciI	CCGC	3 cut(s)	1330, 1722, 2191
AclWI	GGATC	2 cut(s)	260, 1305
AcsI	RAATTY	8 cut(s)	1014, 1103, 1160, 1858, 2210, 2328, 2423, 2565
AcuI	CTGAAG	3 cut(s)	981, 1503, 2507
AdeI	CACNNNGTG	1 cut(s)	1588
AfaI	GTAC	6 cut(s)	446, 552, 686, 1322, 2165, 2240
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	1 cut(s)	2462
AgeI	ACCGGT	1 cut(s)	2503
AjnI	CCWGG	6 cut(s)	33, 331, 582, 1697, 2012, 2063
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
AleI	CACNNNNGTG	1 cut(s)	1668
Alw21I	GWGCWC	3 cut(s)	582, 1036, 2250
Alw26I	GTCTC	5 cut(s)	189, 978, 1727, 2367, 2584
Alw44I	GTGCAC	1 cut(s)	1032
AlwI	GGATC	2 cut(s)	260, 1305
AlwNI	CAGNNNCTG	1 cut(s)	1569
AoxI	GGCC	6 cut(s)	31, 154, 412, 866, 2038, 2069
ApaLI	GTGCAC	1 cut(s)	1032
ApeKI	GCWGC	4 cut(s)	172, 1621, 2144, 2296
ApoI	RAATTY	8 cut(s)	1014, 1103, 1160, 1858, 2210, 2328, 2423, 2565
ArsI	GACNNNNNNTTYG	2 cut(s)	64, 96
AseI	ATTAAT	1 cut(s)	1713
AsiGI	ACCGGT	1 cut(s)	2503
Asp700I	GAANNNNTTC	1 cut(s)	399
AspS9I	GGNCC	5 cut(s)	412, 418, 469, 644, 2501
AsuC2I	CCSGG	1 cut(s)	416
AsuHPI	GGTGA	6 cut(s)	247, 1423, 1628, 1792, 2057, 2518
AsuNHI	GCTAGC	1 cut(s)	1361
AvaII	GGWCC	4 cut(s)	418, 469, 644, 2501
AxyI	CCTNAGG	1 cut(s)	1325
BaeGI	GKGCMC	1 cut(s)	1036
BanII	GRGCYC	3 cut(s)	582, 2064, 2250
BarI	GAAGNNNNNNTAC	4 cut(s)	534, 566, 2501, 2533
BauI	CACGAG	1 cut(s)	405
BbsI	GAAGAC	6 cut(s)	252, 734, 1142, 1865, 1956, 2097
Bbv12I	GWGCWC	3 cut(s)	582, 1036, 2250
BbvI	GCAGC	4 cut(s)	184, 1633, 2156, 2283
BccI	CCATC	6 cut(s)	347, 560, 1241, 1385, 1433, 1904
BceAI	ACGGC	2 cut(s)	1303, 2132
BciT130I	CCWGG	6 cut(s)	35, 333, 584, 1699, 2014, 2065
BciVI	GTATCC	1 cut(s)	2171
BclI	TGATCA	1 cut(s)	187
BcnI	CCSGG	1 cut(s)	416
BcoDI	GTCTC	5 cut(s)	189, 978, 1727, 2367, 2584
BfaI	CTAG	9 cut(s)	152, 626, 678, 875, 1181, 1362, 1752, 2096, 2538
BfmI	CTRYAG	5 cut(s)	170, 450, 996, 1818, 2297
BfrI	CTTAAG	1 cut(s)	377
BfuI	GTATCC	1 cut(s)	2171
BglI	GCCNNNNNGGC	1 cut(s)	2068
BglII	AGATCT	2 cut(s)	1353, 1822
BisI	GCNGC	5 cut(s)	173, 1622, 1723, 2145, 2297
BlpI	GCTNAGC	2 cut(s)	1625, 2292
BlsI	GCNGC	5 cut(s)	174, 1623, 1724, 2146, 2298
Bme1390I	CCNGG	7 cut(s)	35, 333, 416, 584, 1699, 2014, 2065
Bme18I	GGWCC	4 cut(s)	418, 469, 644, 2501
BmgT120I	GGNCC	5 cut(s)	412, 418, 469, 644, 2501
BmiI	GGNNCC	6 cut(s)	337, 419, 632, 645, 646, 1501
BmrFI	CCNGG	7 cut(s)	35, 333, 416, 584, 1699, 2014, 2065
BmrI	ACTGGG	1 cut(s)	319
BmsI	GCATC	6 cut(s)	993, 1297, 1305, 1666, 1843, 2502
BmtI	GCTAGC	1 cut(s)	1365
BmuI	ACTGGG	1 cut(s)	319
BpiI	GAAGAC	6 cut(s)	252, 734, 1142, 1865, 1956, 2097
BplI	GAGNNNNNCTC	2 cut(s)	2362, 2394
BpmI	CTGGAG	3 cut(s)	566, 1146, 1751
Bpu1102I	GCTNAGC	2 cut(s)	1625, 2292
BpuEI	CTTGAG	4 cut(s)	577, 992, 1044, 1256
BpuMI	CCSGG	1 cut(s)	416
Bsa29I	ATCGAT	1 cut(s)	1887
BsaAI	YACGTR	2 cut(s)	1528, 2465
BsaBI	GATNNNNATC	3 cut(s)	1443, 1893, 1919
BsaJI	CCNNGG	4 cut(s)	157, 1761, 2041, 2063
BsaWI	WCCGGW	1 cut(s)	2503
BsaXI	ACNNNNNCTCC	4 cut(s)	250, 280, 1830, 1860
Bse118I	RCCGGY	2 cut(s)	710, 2503
Bse1I	ACTGG	8 cut(s)	254, 314, 1209, 1518, 1574, 1598, 2442, 2560
Bse21I	CCTNAGG	1 cut(s)	1325
Bse3DI	GCAATG	2 cut(s)	953, 2313
Bse8I	GATNNNNATC	3 cut(s)	1443, 1893, 1919
BseBI	CCWGG	6 cut(s)	35, 333, 584, 1699, 2014, 2065
BseCI	ATCGAT	1 cut(s)	1887
BseDI	CCNNGG	4 cut(s)	157, 1761, 2041, 2063
BseGI	GGATG	4 cut(s)	1252, 1432, 1657, 1858
BseJI	GATNNNNATC	3 cut(s)	1443, 1893, 1919
BseMI	GCAATG	2 cut(s)	953, 2313
BseMII	CTCAG	6 cut(s)	1057, 1316, 2211, 2226, 2306, 2373
BseNI	ACTGG	8 cut(s)	254, 314, 1209, 1518, 1574, 1598, 2442, 2560
BseRI	GAGGAG	2 cut(s)	576, 1851
BseSI	GKGCMC	1 cut(s)	1036
BseXI	GCAGC	4 cut(s)	184, 1633, 2156, 2283
Bsh1236I	CGCG	1 cut(s)	2088
BshFI	GGCC	6 cut(s)	33, 156, 414, 868, 2040, 2071
BshTI	ACCGGT	1 cut(s)	2503
BshVI	ATCGAT	1 cut(s)	1887
BsiHKAI	GWGCWC	3 cut(s)	582, 1036, 2250
BsiSI	CCGG	3 cut(s)	415, 711, 2504
BslFI	GGGAC	4 cut(s)	85, 605, 630, 2242
BsmAI	GTCTC	5 cut(s)	189, 978, 1727, 2367, 2584
BsmFI	GGGAC	4 cut(s)	85, 605, 630, 2242
BsmI	GAATGC	3 cut(s)	948, 1725, 2341
BsnI	GGCC	6 cut(s)	33, 156, 414, 868, 2040, 2071
Bsp1286I	GDGCHC	4 cut(s)	582, 1036, 2064, 2250
Bsp1407I	TGTACA	1 cut(s)	550
Bsp1720I	GCTNAGC	2 cut(s)	1625, 2292
Bsp19I	CCATGG	2 cut(s)	1761, 2041
Bsp68I	TCGCGA	1 cut(s)	2088
BspACI	CCGC	3 cut(s)	1330, 1722, 2191
BspANI	GGCC	6 cut(s)	33, 156, 414, 868, 2040, 2071
BspCNI	CTCAG	6 cut(s)	1056, 1317, 2212, 2227, 2305, 2374
BspDI	ATCGAT	1 cut(s)	1887
BspFNI	CGCG	1 cut(s)	2088
BspHI	TCATGA	1 cut(s)	1303
BspLI	GGNNCC	6 cut(s)	337, 419, 632, 645, 646, 1501
BspMAI	CTGCAG	5 cut(s)	174, 454, 1000, 1822, 2301
BspOI	GCTAGC	1 cut(s)	1365
BspPI	GGATC	2 cut(s)	260, 1305
BspTI	CTTAAG	1 cut(s)	377
BsrDI	GCAATG	2 cut(s)	953, 2313
BsrFI	RCCGGY	2 cut(s)	710, 2503
BsrGI	TGTACA	1 cut(s)	550
BsrI	ACTGG	8 cut(s)	254, 314, 1209, 1518, 1574, 1598, 2442, 2560
BssAI	RCCGGY	2 cut(s)	710, 2503
BssECI	CCNNGG	4 cut(s)	157, 1761, 2041, 2063
BssSI	CACGAG	1 cut(s)	405
BssT1I	CCWWGG	3 cut(s)	157, 1761, 2041
Bst2BI	CACGAG	1 cut(s)	405
Bst2UI	CCWGG	6 cut(s)	35, 333, 584, 1699, 2014, 2065
Bst6I	CTCTTC	3 cut(s)	309, 1065, 1479
BstAFI	CTTAAG	1 cut(s)	377
BstAPI	GCANNNNNTGC	2 cut(s)	148, 2305
BstAUI	TGTACA	1 cut(s)	550
BstBAI	YACGTR	2 cut(s)	1528, 2465
BstC8I	GCNNGC	7 cut(s)	234, 1122, 1174, 1363, 1427, 1720, 1809
BstDEI	CTNAG	7 cut(s)	1043, 1325, 1625, 2220, 2235, 2292, 2382
BstDSI	CCRYGG	2 cut(s)	1761, 2041
BstEII	GGTNACC	1 cut(s)	298
BstENI	CCTNNNNNAGG	1 cut(s)	2172
BstF5I	GGATG	4 cut(s)	1252, 1432, 1657, 1858
BstFNI	CGCG	1 cut(s)	2088
BstMAI	GTCTC	5 cut(s)	189, 978, 1727, 2367, 2584
BstMWI	GCNNNNNNNGC	8 cut(s)	148, 1529, 1757, 1817, 2068, 2077, 2141, 2305
BstNI	CCWGG	6 cut(s)	35, 333, 584, 1699, 2014, 2065
BstNSI	RCATGY	1 cut(s)	2109
BstPI	GGTNACC	1 cut(s)	298
BstSCI	CCNGG	7 cut(s)	33, 331, 414, 582, 1697, 2012, 2063
BstSFI	CTRYAG	5 cut(s)	170, 450, 996, 1818, 2297
BstSLI	GKGCMC	1 cut(s)	1036
BstUI	CGCG	1 cut(s)	2088
BstV1I	GCAGC	4 cut(s)	184, 1633, 2156, 2283
BstV2I	GAAGAC	6 cut(s)	252, 734, 1142, 1865, 1956, 2097
BstX2I	RGATCY	2 cut(s)	1353, 1822
BstYI	RGATCY	2 cut(s)	1353, 1822
Bsu15I	ATCGAT	1 cut(s)	1887
Bsu36I	CCTNAGG	1 cut(s)	1325
BsuI	GTATCC	1 cut(s)	2171
BsuRI	GGCC	6 cut(s)	33, 156, 414, 868, 2040, 2071
BsuTUI	ATCGAT	1 cut(s)	1887
BtgI	CCRYGG	2 cut(s)	1761, 2041
BtsCI	GGATG	4 cut(s)	1252, 1432, 1657, 1858
BtsI	GCAGTG	2 cut(s)	521, 1593
BtuMI	TCGCGA	1 cut(s)	2088
Cac8I	GCNNGC	7 cut(s)	234, 1122, 1174, 1363, 1427, 1720, 1809
CaiI	CAGNNNCTG	1 cut(s)	1569
CciI	TCATGA	1 cut(s)	1303
Cfr10I	RCCGGY	2 cut(s)	710, 2503
Cfr13I	GGNCC	5 cut(s)	412, 418, 469, 644, 2501
ClaI	ATCGAT	1 cut(s)	1887
Csp6I	GTAC	6 cut(s)	445, 551, 685, 1321, 2164, 2239
CspAI	ACCGGT	1 cut(s)	2503
CspCI	CAANNNNNGTGG	4 cut(s)	410, 445, 1997, 2032
CviQI	GTAC	6 cut(s)	445, 551, 685, 1321, 2164, 2239
DdeI	CTNAG	7 cut(s)	1043, 1325, 1625, 2220, 2235, 2292, 2382
DraIII	CACNNNGTG	1 cut(s)	1588
Eam1104I	CTCTTC	3 cut(s)	309, 1065, 1479
EarI	CTCTTC	3 cut(s)	309, 1065, 1479
EciI	GGCGGA	1 cut(s)	1345
Ecl136II	GAGCTC	2 cut(s)	580, 2248
Eco130I	CCWWGG	3 cut(s)	157, 1761, 2041
Eco24I	GRGCYC	3 cut(s)	582, 2064, 2250
Eco32I	GATATC	2 cut(s)	979, 1550
Eco47I	GGWCC	4 cut(s)	418, 469, 644, 2501
Eco53kI	GAGCTC	2 cut(s)	580, 2248
Eco57I	CTGAAG	3 cut(s)	981, 1503, 2507
Eco81I	CCTNAGG	1 cut(s)	1325
Eco91I	GGTNACC	1 cut(s)	298
EcoICRI	GAGCTC	2 cut(s)	580, 2248
EcoNI	CCTNNNNNAGG	1 cut(s)	2172
EcoO109I	RGGNCCY	1 cut(s)	644
EcoO65I	GGTNACC	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	2565
EcoRII	CCWGG	6 cut(s)	33, 331, 582, 1697, 2012, 2063
EcoRV	GATATC	2 cut(s)	979, 1550
EcoT14I	CCWWGG	3 cut(s)	157, 1761, 2041
EcoT22I	ATGCAT	2 cut(s)	1312, 1693
EcoT38I	GRGCYC	3 cut(s)	582, 2064, 2250
ErhI	CCWWGG	3 cut(s)	157, 1761, 2041
FalI	AAGNNNNNCTT	6 cut(s)	287, 319, 531, 563, 912, 944
FaqI	GGGAC	4 cut(s)	85, 605, 630, 2242
FauNDI	CATATG	3 cut(s)	1505, 1900, 2120
FbaI	TGATCA	1 cut(s)	187
Fnu4HI	GCNGC	5 cut(s)	173, 1622, 1723, 2145, 2297
FokI	GGATG	4 cut(s)	1259, 1419, 1644, 1865
FriOI	GRGCYC	3 cut(s)	582, 2064, 2250
Fsp4HI	GCNGC	5 cut(s)	173, 1622, 1723, 2145, 2297
FspBI	CTAG	9 cut(s)	152, 626, 678, 875, 1181, 1362, 1752, 2096, 2538
GluI	GCNGC	5 cut(s)	173, 1622, 1723, 2145, 2297
GsuI	CTGGAG	3 cut(s)	566, 1146, 1751
HaeIII	GGCC	6 cut(s)	33, 156, 414, 868, 2040, 2071
HapII	CCGG	3 cut(s)	415, 711, 2504
HincII	GTYRAC	3 cut(s)	487, 1141, 2152
HindII	GTYRAC	3 cut(s)	487, 1141, 2152
HindIII	AAGCTT	2 cut(s)	1423, 1521
HpaI	GTTAAC	1 cut(s)	487
HpaII	CCGG	3 cut(s)	415, 711, 2504
HphI	GGTGA	6 cut(s)	247, 1423, 1628, 1792, 2057, 2518
Hpy188I	TCNGA	5 cut(s)	202, 823, 983, 1022, 1046
HpyCH4IV	ACGT	2 cut(s)	1527, 2464
HpyF10VI	GCNNNNNNNGC	8 cut(s)	148, 1529, 1757, 1817, 2068, 2077, 2141, 2305
HpyF3I	CTNAG	7 cut(s)	1043, 1325, 1625, 2220, 2235, 2292, 2382
HpySE526I	ACGT	2 cut(s)	1527, 2464
KflI	GGGWCCC	1 cut(s)	644
Ksp22I	TGATCA	1 cut(s)	187
KspAI	GTTAAC	1 cut(s)	487
LmnI	GCTCC	5 cut(s)	37, 335, 585, 1505, 2023
Lsp1109I	GCAGC	4 cut(s)	184, 1633, 2156, 2283
LweI	GCATC	6 cut(s)	993, 1297, 1305, 1666, 1843, 2502
MaeI	CTAG	9 cut(s)	152, 626, 678, 875, 1181, 1362, 1752, 2096, 2538
MaeII	ACGT	2 cut(s)	1527, 2464
MaeIII	GTNAC	4 cut(s)	298, 1565, 1670, 2045
MfeI	CAATTG	1 cut(s)	1037
MflI	RGATCY	2 cut(s)	1353, 1822
MhlI	GDGCHC	4 cut(s)	582, 1036, 2064, 2250
MlyI	GAGTC	5 cut(s)	191, 889, 1535, 2077, 2224
MmeI	TCCRAC	4 cut(s)	81, 259, 1371, 2479
Mph1103I	ATGCAT	2 cut(s)	1312, 1693
MroXI	GAANNNNTTC	1 cut(s)	399
MseI	TTAA	9 cut(s)	213, 272, 378, 486, 773, 930, 1421, 1713, 1935
MslI	CAYNNNNRTG	6 cut(s)	363, 782, 1305, 1437, 1668, 1766
MspA1I	CMGCKG	2 cut(s)	1481, 2296
MspCI	CTTAAG	1 cut(s)	377
MspI	CCGG	3 cut(s)	415, 711, 2504
MspR9I	CCNGG	7 cut(s)	35, 333, 416, 584, 1699, 2014, 2065
MunI	CAATTG	1 cut(s)	1037
Mva1269I	GAATGC	3 cut(s)	948, 1725, 2341
MvaI	CCWGG	6 cut(s)	35, 333, 584, 1699, 2014, 2065
MvnI	CGCG	1 cut(s)	2088
MwoI	GCNNNNNNNGC	8 cut(s)	148, 1529, 1757, 1817, 2068, 2077, 2141, 2305
NciI	CCSGG	1 cut(s)	416
NcoI	CCATGG	2 cut(s)	1761, 2041
NdeI	CATATG	3 cut(s)	1505, 1900, 2120
NheI	GCTAGC	1 cut(s)	1361
NlaIV	GGNNCC	6 cut(s)	337, 419, 632, 645, 646, 1501
NmuCI	GTSAC	3 cut(s)	1565, 1670, 2045
NruI	TCGCGA	1 cut(s)	2088
NsiI	ATGCAT	2 cut(s)	1312, 1693
NspI	RCATGY	1 cut(s)	2109
OliI	CACNNNNGTG	1 cut(s)	1668
PagI	TCATGA	1 cut(s)	1303
PctI	GAATGC	3 cut(s)	948, 1725, 2341
PdmI	GAANNNNTTC	1 cut(s)	399
PfeI	GAWTC	5 cut(s)	284, 734, 754, 1047, 2252
PflFI	GACNNNGTC	1 cut(s)	596
PfoI	TCCNGGA	2 cut(s)	331, 582
PinAI	ACCGGT	1 cut(s)	2503
PkrI	GCNGC	5 cut(s)	174, 1623, 1724, 2146, 2298
PleI	GAGTC	5 cut(s)	191, 889, 1535, 2077, 2224
PpsI	GAGTC	5 cut(s)	191, 889, 1535, 2077, 2224
Ppu21I	YACGTR	2 cut(s)	1528, 2465
PpuMI	RGGWCCY	1 cut(s)	644
PshBI	ATTAAT	1 cut(s)	1713
PsiI	TTATAA	1 cut(s)	1785
Psp124BI	GAGCTC	2 cut(s)	582, 2250
Psp5II	RGGWCCY	1 cut(s)	644
Psp6I	CCWGG	6 cut(s)	33, 331, 582, 1697, 2012, 2063
PspEI	GGTNACC	1 cut(s)	298
PspGI	CCWGG	6 cut(s)	33, 331, 582, 1697, 2012, 2063
PspN4I	GGNNCC	6 cut(s)	337, 419, 632, 645, 646, 1501
PspPI	GGNCC	5 cut(s)	412, 418, 469, 644, 2501
PspPPI	RGGWCCY	1 cut(s)	644
PstI	CTGCAG	5 cut(s)	174, 454, 1000, 1822, 2301
PstNI	CAGNNNCTG	1 cut(s)	1569
PsuI	RGATCY	2 cut(s)	1353, 1822
PsyI	GACNNNGTC	1 cut(s)	596
PvuII	CAGCTG	2 cut(s)	1481, 2296
RruI	TCGCGA	1 cut(s)	2088
RsaI	GTAC	6 cut(s)	446, 552, 686, 1322, 2165, 2240
RsaNI	GTAC	6 cut(s)	445, 551, 685, 1321, 2164, 2239
RseI	CAYNNNNRTG	6 cut(s)	363, 782, 1305, 1437, 1668, 1766
SacI	GAGCTC	2 cut(s)	582, 2250
SaqAI	TTAA	9 cut(s)	213, 272, 378, 486, 773, 930, 1421, 1713, 1935
SatI	GCNGC	5 cut(s)	173, 1622, 1723, 2145, 2297
Sau96I	GGNCC	5 cut(s)	412, 418, 469, 644, 2501
SchI	GAGTC	5 cut(s)	191, 889, 1535, 2077, 2224
ScrFI	CCNGG	7 cut(s)	35, 333, 416, 584, 1699, 2014, 2065
SduI	GDGCHC	4 cut(s)	582, 1036, 2064, 2250
SfaNI	GCATC	6 cut(s)	993, 1297, 1305, 1666, 1843, 2502
SfcI	CTRYAG	5 cut(s)	170, 450, 996, 1818, 2297
SinI	GGWCC	4 cut(s)	418, 469, 644, 2501
SmiMI	CAYNNNNRTG	6 cut(s)	363, 782, 1305, 1437, 1668, 1766
SmlI	CTYRAG	5 cut(s)	377, 556, 1007, 1059, 1271
SmoI	CTYRAG	5 cut(s)	377, 556, 1007, 1059, 1271
SsiI	CCGC	3 cut(s)	1330, 1722, 2191
SspMI	CTAG	9 cut(s)	152, 626, 678, 875, 1181, 1362, 1752, 2096, 2538
SstI	GAGCTC	2 cut(s)	582, 2250
StyD4I	CCNGG	7 cut(s)	33, 331, 414, 582, 1697, 2012, 2063
StyI	CCWWGG	3 cut(s)	157, 1761, 2041
TaiI	ACGT	2 cut(s)	1530, 2467
TaqI	TCGA	4 cut(s)	1068, 1887, 2250, 2336
TatI	WGTACW	2 cut(s)	550, 2238
TauI	GCSGC	1 cut(s)	1725
TfiI	GAWTC	5 cut(s)	284, 734, 754, 1047, 2252
Tru1I	TTAA	9 cut(s)	213, 272, 378, 486, 773, 930, 1421, 1713, 1935
Tru9I	TTAA	9 cut(s)	213, 272, 378, 486, 773, 930, 1421, 1713, 1935
TseFI	GTSAC	3 cut(s)	1565, 1670, 2045
TseI	GCWGC	4 cut(s)	172, 1621, 2144, 2296
Tsp45I	GTSAC	3 cut(s)	1565, 1670, 2045
TspGWI	ACGGA	1 cut(s)	1658
Tth111I	GACNNNGTC	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	377
VneI	GTGCAC	1 cut(s)	1032
VpaK11BI	GGWCC	4 cut(s)	418, 469, 644, 2501
VspI	ATTAAT	1 cut(s)	1713
XagI	CCTNNNNNAGG	1 cut(s)	2172
XapI	RAATTY	8 cut(s)	1014, 1103, 1160, 1858, 2210, 2328, 2423, 2565
XceI	RCATGY	1 cut(s)	2109
XcmI	CCANNNNNNNNNTGG	3 cut(s)	41, 1117, 1510
XmnI	GAANNNNTTC	1 cut(s)	399
XspI	CTAG	9 cut(s)	152, 626, 678, 875, 1181, 1362, 1752, 2096, 2538
Zsp2I	ATGCAT	2 cut(s)	1312, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.