FvH4_6g06090

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
3477205 .. 3482314
5110 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06090.t2

Sequence Viewer

Length: 2592 bp
ATGTTGCATAACTTGCTTGATGCAATCACAGGCCATCATCACAATGGCGGCAGTACGAAACAGATTACAGGGACTGTGGTGCTGATGAAGAAGAATGTGTTGGATTTCAATGACTTCAATGCTTCTGTTCTTGATCGCGTGCATGAATTGGTGGGGCAAAGGGTTTCTCTGCAGCTCATCAGTGCTGTCAATGCCGATTCCGATAATGGATTGAAAGGGAAACTTGGAAAGCCTGCATATTTGGAAGACTGGATCAGCACAATCACTCCTTTAACAGCAGGAGATTCTGCATACAAGGTTACCTTTGACTGGGATGACGAAATCGGAGTTCCAGGAGCAATCCTAATAAAAAACAATCACCACAGTCAGTTCTACCTTAAGACCATCACACTCGAAAATGTTCCTGGTGAGGGTACAGTTCACTTTGTTTGCAACTCATGGGTGTACCCTGCAGAAAAAAACACGAAAGACCGCATTTTCTTTGTTAACAAGACTTACCTTCTAAGTGATACACCACTACCACTACAACAGTACAGAAAAGAAGAACTAGTACACTTGAGAGGAGATGGGAAAGGAGAGCTCCAGGAGTATGACAGGGTCTATGACTATGCTTACTACAATGATCTGGGAAATCCAGACAAGGGTTCAGATTATGCCCGTCAAACTCTTGGAGGGACTAGTGAGTATCCTTATCCTCGAAGAGGAAGAACTGGCCGTGCTCCAACTGAGTCAGATCCTAGCAGTGAGAGTAGGATCCCTCTTCTCATGAGCTTAGACATTTATGTTCCAAGAGACGAACGATTCGGACACTTGAAGATGTCTGATTTCCTTGCTTATGCACTGAAGTCCATAGCTCAATTCATCAGACCTGAGCTAGAAGCTCTATTTGATCCCACTCCTAATGAGTTTGACAGCTTCGAAGATGTACTCAAACTCTATGAAGGAGGAATTGAAGTACCTGAAGGTTTCTTAAAGGACATTGGGGACAACATCCCTCTAGAGATGATCAAGGAAATTTTCCGGACCGATGGTGCACAGTTCCTCAAGTTCCCAACGCCTCAAGTGATCAAAGAGAATAGGCTGGCTTGGAGGACAGATGAAGAATTTGCCAGAGAAATGCTAGCTGGAGTGAACCCTGTCAACATTAGTCTCCTCCAAGCATTTCCACCGGTAAGCACTCTAGACCAAAATGTTTATGGTGATCAGTCCAGTACAATAACAGAAGAACACATCAAGAATAACTTGGATGGACTGACAGTGGAGAAGGCACTCAAGAGCAACAAGCTATTCATATTAGACCACCATGATGCATTGATGCCATACGTGAGGCGTATAAACTCAAATACCTCCTCAAAGATCTATGCTAGCAGGACACTCCTTTTTTTGAAAAGTGATGGAACTTTGAAGCCACTGGTGATTGAACTAAGCTTGCCTCATCCTGATGGAGATGAGCATGGTCGCATTAGCAGTGTATTCACGCCAGCTGAGGAAGGTGTAGAAAGCTCCATATGGCAGCTGGCCAAAGCTTATGTTGCTGTAAATGACTCTGGAGTTCATCAACTTATCAGTCACTGGTTGAATACTCATGCAGTGTGTGAGCCAGTAGTAATAGCAACTAACAGGCAACTGAGTGTGGTTCACCCAATTTACAAGCTTCTTCATCCTCACTTCCGCGACACTATGAACATAAATGCACTAGCCAGGCAAATCCTTATCAATGCTGGTGGCATTCTGGAGACAACAGTGTTTCCAGGTAGGTATGCCATGGAGATGTCATCAGTTGTTTACAAGAAATGGGTTTTCCCTGAGCAAGCTCTCCCTGCAGATCTCATCAAGAGAGGAATGGCAGTCAAGGATGAGAGTGCTCCACACGGTCTACGCCTAGTGATAGAGGACTACCCCTATGGTGCTGATGGGCTCGAAATCTGGTTTGCGATAAGAAATTGGGTAGAAGACTACTGCTCGTTCTACTACAAGAGTGATAACATTGTTCAAAAAGACACAGAACTCCAATCCTGGTGGAAGGAACTAGTAGAGGAGGGTCATGGTGACAAAAAAGATGAGCCCTGGTGGCCTAAAATGCAGACTCGTGAAGAGCTAATTGAAGCTTGCACTATCATCATATGGACTTCATCTGCACTCCATGCAGCTGTCAACTTTGGACAGTACCCTTATGCAGGCTACCTCCCATGCCGCCCCACTGTAAGCCGAAGGTTCATGCCCGAAAAAGGAACTCCTGAGTATGATGAGCTTGAGTCCAACCCTGATAAGGCCTTCTTGAAAACAATCACTGCTCAGTTCCAGACAGTGCTTGGCATTGCCCTGATTGAGATTCTGTCAAGGCATTCTACTGATGAAGTGTATTTGGGCCAGAGGGACACTCCTAACTGGACAGCAGATGCAGAAGCATTGCAAGCTTTTAACAGATTTGGAAAGAAACTTGCTGAAATCGAAGAGAAGATTACCAACATGAACAATGATGAGAATCTGAAGAACAGGGTTGGAAAGGTGGAGGTGCCATACACTTTGCTGTATCCCACTGGTGAAAGTGGAATTGCTGGCAAGGGAATTCCCAACAGTGTCTCAATCTAA

Protein Analysis

864

Amino Acids

97.5

Weight (kDa)

5.32

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 57 - 161 7.6e-24 PLAT/LH2 domain
Lipoxygenase PF00305 174 - 526 7.2e-145 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2515
AccI GTMKAC 1 cut(s) 1876
AccII CGCG 2 cut(s) 138, 1674
AccIII TCCGGA 1 cut(s) 1020
AciI CCGC 4 cut(s) 48, 472, 1672, 2194
AclWI GGATC 5 cut(s) 260, 728, 748, 761, 884
AcoI YGGCCR 2 cut(s) 712, 1518
AcsI RAATTY 3 cut(s) 1014, 1103, 2568
AcuI CTGAAG 3 cut(s) 863, 981, 2510
AfaI GTAC 9 cut(s) 55, 415, 446, 533, 552, 927, 957, 1213, 2168
AfiI CCNNNNNNNGG 7 cut(s) 309, 410, 641, 701, 2177, 2228, 2269
AflII CTTAAG 1 cut(s) 377
AgeI ACCGGT 1 cut(s) 1168
AhlI ACTAGT 3 cut(s) 547, 677, 2029
AjnI CCWGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
Alw21I GWGCWC 4 cut(s) 582, 721, 1036, 1867
Alw26I GTCTC 4 cut(s) 786, 1154, 1730, 2587
Alw44I GTGCAC 1 cut(s) 1032
AlwI GGATC 5 cut(s) 260, 728, 748, 761, 884
AlwNI CAGNNNCTG 2 cut(s) 74, 1572
Aor13HI TCCGGA 1 cut(s) 1020
AoxI GGCC 6 cut(s) 31, 712, 1518, 2072, 2271, 2368
ApaLI GTGCAC 1 cut(s) 1032
ApeKI GCWGC 3 cut(s) 172, 1513, 2147
ApoI RAATTY 3 cut(s) 1014, 1103, 2568
ArsI GACNNNNNNTTYG 2 cut(s) 785, 817
AsiGI ACCGGT 1 cut(s) 1168
Asp700I GAANNNNTTC 1 cut(s) 399
AspS9I GGNCC 2 cut(s) 1023, 2368
AsuHPI GGTGA 7 cut(s) 350, 419, 1211, 1426, 1631, 2060, 2555
AsuII TTCGAA 1 cut(s) 918
AsuNHI GCTAGC 2 cut(s) 1120, 1364
AvaII GGWCC 1 cut(s) 1023
BaeGI GKGCMC 1 cut(s) 1036
BalI TGGCCA 1 cut(s) 1520
BamHI GGATCC 1 cut(s) 753
BanI GGYRCC 1 cut(s) 2515
BanII GRGCYC 3 cut(s) 582, 1920, 2067
BarI GAAGNNNNNNTAC 2 cut(s) 534, 566
BauI CACGAG 1 cut(s) 2088
BbsI GAAGAC 2 cut(s) 252, 1959
Bbv12I GWGCWC 4 cut(s) 582, 721, 1036, 1867
BbvCI CCTCAGC 1 cut(s) 1485
BbvI GCAGC 3 cut(s) 184, 1525, 2159
BccI CCATC 8 cut(s) 42, 392, 560, 1022, 1241, 1388, 1436, 1907
BceAI ACGGC 1 cut(s) 699
BciT130I CCWGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
BciVI GTATCC 2 cut(s) 696, 2544
BclI TGATCA 3 cut(s) 1005, 1065, 1201
BcoDI GTCTC 4 cut(s) 786, 1154, 1730, 2587
BcuI ACTAGT 3 cut(s) 547, 677, 2029
BfmI CTRYAG 3 cut(s) 170, 450, 1821
BfrI CTTAAG 1 cut(s) 377
BfuI GTATCC 2 cut(s) 696, 2544
BglI GCCNNNNNGGC 1 cut(s) 2071
BglII AGATCT 2 cut(s) 1356, 1825
BisI GCNGC 5 cut(s) 49, 173, 1514, 2148, 2194
BlsI GCNGC 5 cut(s) 50, 174, 1515, 2149, 2195
Bme1390I CCNGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
Bme18I GGWCC 1 cut(s) 1023
BmgT120I GGNCC 2 cut(s) 1023, 2368
BmiI GGNNCC 2 cut(s) 755, 2517
BmrFI CCNGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
BmrI ACTGGG 1 cut(s) 319
BmsI GCATC 4 cut(s) 10, 1297, 1305, 2389
BmtI GCTAGC 2 cut(s) 1124, 1368
BmuI ACTGGG 1 cut(s) 319
BpiI GAAGAC 2 cut(s) 252, 1959
BplI GAGNNNNNCTC 2 cut(s) 2365, 2397
BpmI CTGGAG 4 cut(s) 566, 1146, 1569, 1754
Bpu10I CCTNAGC 3 cut(s) 870, 1485, 1806
Bpu14I TTCGAA 1 cut(s) 918
BpuEI CTTGAG 5 cut(s) 577, 1028, 1044, 1256, 2273
BsaAI YACGTR 1 cut(s) 1324
BsaBI GATNNNNATC 1 cut(s) 2484
BsaJI CCNNGG 2 cut(s) 1764, 2066
BsaWI WCCGGW 2 cut(s) 1020, 1168
BsaXI ACNNNNNCTCC 2 cut(s) 250, 280
Bsc4I CCNNNNNNNGG 7 cut(s) 309, 410, 641, 701, 2177, 2228, 2269
Bse118I RCCGGY 1 cut(s) 1168
Bse1I ACTGG 9 cut(s) 254, 314, 715, 1209, 1416, 1577, 1601, 2393, 2545
Bse3DI GCAATG 2 cut(s) 2316, 2408
Bse8I GATNNNNATC 1 cut(s) 2484
BseAI TCCGGA 1 cut(s) 1020
BseBI CCWGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
BseDI CCNNGG 2 cut(s) 1764, 2066
BseGI GGATG 6 cut(s) 319, 990, 1252, 1435, 1660, 1861
BseJI GATNNNNATC 1 cut(s) 2484
BseLI CCNNNNNNNGG 7 cut(s) 309, 410, 641, 701, 2177, 2228, 2269
BseMI GCAATG 2 cut(s) 2316, 2408
BseMII CTCAG 7 cut(s) 717, 861, 1476, 1619, 1797, 2229, 2309
BseNI ACTGG 9 cut(s) 254, 314, 715, 1209, 1416, 1577, 1601, 2393, 2545
BseRI GAGGAG 4 cut(s) 576, 1142, 1339, 2051
BseSI GKGCMC 1 cut(s) 1036
BseXI GCAGC 3 cut(s) 184, 1525, 2159
BsgI GTGCAG 1 cut(s) 2121
Bsh1236I CGCG 2 cut(s) 138, 1674
BshFI GGCC 6 cut(s) 33, 714, 1520, 2074, 2273, 2370
BshNI GGYRCC 1 cut(s) 2515
BshTI ACCGGT 1 cut(s) 1168
BsiHKAI GWGCWC 4 cut(s) 582, 721, 1036, 1867
BsiSI CCGG 2 cut(s) 1021, 1169
BslFI GGGAC 4 cut(s) 85, 688, 998, 2390
BslI CCNNNNNNNGG 7 cut(s) 309, 410, 641, 701, 2177, 2228, 2269
BsmAI GTCTC 4 cut(s) 786, 1154, 1730, 2587
BsmBI CGTCTC 1 cut(s) 786
BsmFI GGGAC 4 cut(s) 85, 688, 998, 2390
BsmI GAATGC 2 cut(s) 1728, 2344
BsnI GGCC 6 cut(s) 33, 714, 1520, 2074, 2273, 2370
Bsp119I TTCGAA 1 cut(s) 918
Bsp1286I GDGCHC 6 cut(s) 582, 721, 1036, 1867, 1920, 2067
Bsp13I TCCGGA 1 cut(s) 1020
Bsp19I CCATGG 1 cut(s) 1764
BspACI CCGC 4 cut(s) 48, 472, 1672, 2194
BspANI GGCC 6 cut(s) 33, 714, 1520, 2074, 2273, 2370
BspCNI CTCAG 7 cut(s) 718, 862, 1477, 1620, 1798, 2230, 2308
BspEI TCCGGA 1 cut(s) 1020
BspFNI CGCG 2 cut(s) 138, 1674
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 2 cut(s) 755, 2517
BspMAI CTGCAG 3 cut(s) 174, 454, 1825
BspOI GCTAGC 2 cut(s) 1124, 1368
BspPI GGATC 5 cut(s) 260, 728, 748, 761, 884
BspQI GCTCTTC 1 cut(s) 2088
BspT104I TTCGAA 1 cut(s) 918
BspT107I GGYRCC 1 cut(s) 2515
BspTI CTTAAG 1 cut(s) 377
BsrDI GCAATG 2 cut(s) 2316, 2408
BsrFI RCCGGY 1 cut(s) 1168
BsrI ACTGG 9 cut(s) 254, 314, 715, 1209, 1416, 1577, 1601, 2393, 2545
BssAI RCCGGY 1 cut(s) 1168
BssECI CCNNGG 2 cut(s) 1764, 2066
BssSI CACGAG 1 cut(s) 2088
BssT1I CCWWGG 1 cut(s) 1764
Bst2BI CACGAG 1 cut(s) 2088
Bst2UI CCWGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
Bst6I CTCTTC 4 cut(s) 694, 765, 2088, 2448
BstAFI CTTAAG 1 cut(s) 377
BstAPI GCANNNNNTGC 2 cut(s) 13, 2144
BstBAI YACGTR 1 cut(s) 1324
BstBI TTCGAA 1 cut(s) 918
BstDSI CCRYGG 1 cut(s) 1764
BstEII GGTNACC 1 cut(s) 298
BstENI CCTNNNNNAGG 2 cut(s) 699, 2175
BstF5I GGATG 6 cut(s) 319, 990, 1252, 1435, 1660, 1861
BstFNI CGCG 2 cut(s) 138, 1674
BstMAI GTCTC 4 cut(s) 786, 1154, 1730, 2587
BstMWI GCNNNNNNNGC 8 cut(s) 13, 191, 1532, 1820, 2071, 2080, 2144, 2414
BstNI CCWGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
BstPI GGTNACC 1 cut(s) 298
BstSCI CCNGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
BstSFI CTRYAG 3 cut(s) 170, 450, 1821
BstSLI GKGCMC 1 cut(s) 1036
BstUI CGCG 2 cut(s) 138, 1674
BstV1I GCAGC 3 cut(s) 184, 1525, 2159
BstV2I GAAGAC 2 cut(s) 252, 1959
BstX2I RGATCY 4 cut(s) 733, 753, 1356, 1825
BstYI RGATCY 4 cut(s) 733, 753, 1356, 1825
BsuI GTATCC 2 cut(s) 696, 2544
BsuRI GGCC 6 cut(s) 33, 714, 1520, 2074, 2273, 2370
BtgI CCRYGG 1 cut(s) 1764
BtsCI GGATG 6 cut(s) 319, 990, 1252, 1435, 1660, 1861
BtsI GCAGTG 4 cut(s) 748, 1474, 1596, 2289
CaiI CAGNNNCTG 2 cut(s) 74, 1572
CciI TCATGA 1 cut(s) 765
Cfr10I RCCGGY 1 cut(s) 1168
Cfr13I GGNCC 2 cut(s) 1023, 2368
CpoI CGGWCCG 1 cut(s) 1023
Csp6I GTAC 9 cut(s) 54, 414, 445, 532, 551, 926, 956, 1212, 2167
CspAI ACCGGT 1 cut(s) 1168
CspCI CAANNNNNGTGG 4 cut(s) 1705, 1740, 2000, 2035
CspI CGGWCCG 1 cut(s) 1023
CviQI GTAC 9 cut(s) 54, 414, 445, 532, 551, 926, 956, 1212, 2167
EaeI YGGCCR 2 cut(s) 712, 1518
Eam1104I CTCTTC 4 cut(s) 694, 765, 2088, 2448
EarI CTCTTC 4 cut(s) 694, 765, 2088, 2448
Ecl136II GAGCTC 1 cut(s) 580
Eco130I CCWWGG 1 cut(s) 1764
Eco147I AGGCCT 1 cut(s) 2273
Eco24I GRGCYC 3 cut(s) 582, 1920, 2067
Eco47I GGWCC 1 cut(s) 1023
Eco53kI GAGCTC 1 cut(s) 580
Eco57I CTGAAG 3 cut(s) 863, 981, 2510
Eco91I GGTNACC 1 cut(s) 298
EcoICRI GAGCTC 1 cut(s) 580
EcoNI CCTNNNNNAGG 2 cut(s) 699, 2175
EcoO65I GGTNACC 1 cut(s) 298
EcoRI GAATTC 1 cut(s) 2568
EcoRII CCWGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
EcoT14I CCWWGG 1 cut(s) 1764
EcoT22I ATGCAT 1 cut(s) 1312
EcoT38I GRGCYC 3 cut(s) 582, 1920, 2067
ErhI CCWWGG 1 cut(s) 1764
Esp3I CGTCTC 1 cut(s) 786
FalI AAGNNNNNCTT 8 cut(s) 207, 239, 287, 319, 1226, 1258, 2261, 2293
FaqI GGGAC 4 cut(s) 85, 688, 998, 2390
FauNDI CATATG 2 cut(s) 1508, 2123
FbaI TGATCA 3 cut(s) 1005, 1065, 1201
FblI GTMKAC 1 cut(s) 1876
Fnu4HI GCNGC 5 cut(s) 49, 173, 1514, 2148, 2194
FokI GGATG 6 cut(s) 326, 977, 1259, 1422, 1647, 1868
FriOI GRGCYC 3 cut(s) 582, 1920, 2067
Fsp4HI GCNGC 5 cut(s) 49, 173, 1514, 2148, 2194
GluI GCNGC 5 cut(s) 49, 173, 1514, 2148, 2194
GsuI CTGGAG 4 cut(s) 566, 1146, 1569, 1754
HaeIII GGCC 6 cut(s) 33, 714, 1520, 2074, 2273, 2370
HapII CCGG 2 cut(s) 1021, 1169
HincII GTYRAC 3 cut(s) 487, 1141, 2155
HindII GTYRAC 3 cut(s) 487, 1141, 2155
HindIII AAGCTT 5 cut(s) 1426, 1524, 1652, 2106, 2415
HinfI GANTC 9 cut(s) 197, 284, 728, 801, 1544, 2086, 2255, 2332, 2485
HpaI GTTAAC 1 cut(s) 487
HpaII CCGG 2 cut(s) 1021, 1169
HphI GGTGA 7 cut(s) 350, 419, 1211, 1426, 1631, 2060, 2555
Hpy188I TCNGA 8 cut(s) 202, 326, 649, 733, 806, 823, 866, 2490
HpyAV CCTTC 8 cut(s) 509, 935, 956, 1258, 1484, 2017, 2205, 2284
HpyCH4IV ACGT 1 cut(s) 1323
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 191, 1532, 1820, 2071, 2080, 2144, 2414
HpySE526I ACGT 1 cut(s) 1323
Kpn2I TCCGGA 1 cut(s) 1020
Ksp22I TGATCA 3 cut(s) 1005, 1065, 1201
KspAI GTTAAC 1 cut(s) 487
LguI GCTCTTC 1 cut(s) 2088
LmnI GCTCC 5 cut(s) 335, 585, 724, 1508, 1870
Lsp1109I GCAGC 3 cut(s) 184, 1525, 2159
LweI GCATC 4 cut(s) 10, 1297, 1305, 2389
MaeII ACGT 1 cut(s) 1323
MaeIII GTNAC 3 cut(s) 298, 1568, 2048
MflI RGATCY 4 cut(s) 733, 753, 1356, 1825
MhlI GDGCHC 6 cut(s) 582, 721, 1036, 1867, 1920, 2067
MlsI TGGCCA 1 cut(s) 1520
MluNI TGGCCA 1 cut(s) 1520
MlyI GAGTC 4 cut(s) 737, 1538, 2080, 2264
MmeI TCCRAC 4 cut(s) 81, 746, 2283, 2482
Mox20I TGGCCA 1 cut(s) 1520
Mph1103I ATGCAT 1 cut(s) 1312
MroI TCCGGA 1 cut(s) 1020
MroXI GAANNNNTTC 1 cut(s) 399
MscI TGGCCA 1 cut(s) 1520
MseI TTAA 5 cut(s) 272, 378, 486, 971, 2421
MslI CAYNNNNRTG 4 cut(s) 42, 1305, 1440, 1769
Msp20I TGGCCA 1 cut(s) 1520
MspA1I CMGCKG 3 cut(s) 1484, 1516, 2150
MspCI CTTAAG 1 cut(s) 377
MspI CCGG 2 cut(s) 1021, 1169
MspR9I CCNGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
Mva1269I GAATGC 2 cut(s) 1728, 2344
MvaI CCWGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
MvnI CGCG 2 cut(s) 138, 1674
MwoI GCNNNNNNNGC 8 cut(s) 13, 191, 1532, 1820, 2071, 2080, 2144, 2414
NcoI CCATGG 1 cut(s) 1764
NdeI CATATG 2 cut(s) 1508, 2123
NheI GCTAGC 2 cut(s) 1120, 1364
NlaIV GGNNCC 2 cut(s) 755, 2517
NmuCI GTSAC 2 cut(s) 1568, 2048
NsiI ATGCAT 1 cut(s) 1312
NspV TTCGAA 1 cut(s) 918
PagI TCATGA 1 cut(s) 765
PceI AGGCCT 1 cut(s) 2273
PciSI GCTCTTC 1 cut(s) 2088
PctI GAATGC 2 cut(s) 1728, 2344
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 5 cut(s) 197, 284, 801, 2332, 2485
PflFI GACNNNGTC 1 cut(s) 596
PfoI TCCNGGA 2 cut(s) 331, 582
PinAI ACCGGT 1 cut(s) 1168
PkrI GCNGC 5 cut(s) 50, 174, 1515, 2149, 2195
PleI GAGTC 4 cut(s) 736, 1538, 2080, 2263
PpsI GAGTC 4 cut(s) 736, 1538, 2080, 2263
Ppu21I YACGTR 1 cut(s) 1324
Psp124BI GAGCTC 1 cut(s) 582
Psp6I CCWGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
PspEI GGTNACC 1 cut(s) 298
PspGI CCWGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
PspN4I GGNNCC 2 cut(s) 755, 2517
PspPI GGNCC 2 cut(s) 1023, 2368
PstI CTGCAG 3 cut(s) 174, 454, 1825
PstNI CAGNNNCTG 2 cut(s) 74, 1572
PsuI RGATCY 4 cut(s) 733, 753, 1356, 1825
PsyI GACNNNGTC 1 cut(s) 596
PvuII CAGCTG 3 cut(s) 1484, 1516, 2150
RsaI GTAC 9 cut(s) 55, 415, 446, 533, 552, 927, 957, 1213, 2168
RsaNI GTAC 9 cut(s) 54, 414, 445, 532, 551, 926, 956, 1212, 2167
RseI CAYNNNNRTG 4 cut(s) 42, 1305, 1440, 1769
Rsr2I CGGWCCG 1 cut(s) 1023
RsrII CGGWCCG 1 cut(s) 1023
SacI GAGCTC 1 cut(s) 582
SapI GCTCTTC 1 cut(s) 2088
SaqAI TTAA 5 cut(s) 272, 378, 486, 971, 2421
SatI GCNGC 5 cut(s) 49, 173, 1514, 2148, 2194
Sau96I GGNCC 2 cut(s) 1023, 2368
SchI GAGTC 4 cut(s) 737, 1538, 2080, 2264
ScrFI CCNGG 7 cut(s) 333, 405, 584, 1702, 1752, 2017, 2068
SduI GDGCHC 6 cut(s) 582, 721, 1036, 1867, 1920, 2067
SfaNI GCATC 4 cut(s) 10, 1297, 1305, 2389
SfcI CTRYAG 3 cut(s) 170, 450, 1821
SfuI TTCGAA 1 cut(s) 918
SinI GGWCC 1 cut(s) 1023
SmiMI CAYNNNNRTG 4 cut(s) 42, 1305, 1440, 1769
SmlI CTYRAG 6 cut(s) 377, 556, 1043, 1059, 1271, 2252
SmoI CTYRAG 6 cut(s) 377, 556, 1043, 1059, 1271, 2252
SpeI ACTAGT 3 cut(s) 547, 677, 2029
SseBI AGGCCT 1 cut(s) 2273
SsiI CCGC 4 cut(s) 48, 472, 1672, 2194
SstI GAGCTC 1 cut(s) 582
StuI AGGCCT 1 cut(s) 2273
StyD4I CCNGG 7 cut(s) 331, 403, 582, 1700, 1750, 2015, 2066
StyI CCWWGG 1 cut(s) 1764
TaiI ACGT 1 cut(s) 1326
TaqI TCGA 5 cut(s) 393, 697, 918, 1920, 2451
TaqII GACCGA 1 cut(s) 1040
TatI WGTACW 4 cut(s) 531, 550, 925, 1211
TauI GCSGC 2 cut(s) 51, 2196
TfiI GAWTC 5 cut(s) 197, 284, 801, 2332, 2485
Tru1I TTAA 5 cut(s) 272, 378, 486, 971, 2421
Tru9I TTAA 5 cut(s) 272, 378, 486, 971, 2421
TseFI GTSAC 2 cut(s) 1568, 2048
TseI GCWGC 3 cut(s) 172, 1513, 2147
Tsp45I GTSAC 2 cut(s) 1568, 2048
Tth111I GACNNNGTC 1 cut(s) 596
Vha464I CTTAAG 1 cut(s) 377
VneI GTGCAC 1 cut(s) 1032
VpaK11BI GGWCC 1 cut(s) 1023
XagI CCTNNNNNAGG 2 cut(s) 699, 2175
XapI RAATTY 3 cut(s) 1014, 1103, 2568
XbaI TCTAGA 2 cut(s) 997, 1180
XcmI CCANNNNNNNNNTGG 4 cut(s) 41, 1193, 1513, 2309
XmiI GTMKAC 1 cut(s) 1876
XmnI GAANNNNTTC 1 cut(s) 399
Zsp2I ATGCAT 1 cut(s) 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.