copper ion binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400 |
| fragaria_vesca | FvH4_3g46080 FvH4_6g20700 |
| malus_domestica | MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1 |
| prunus_persica | Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1 |
| pyrus_communis | pycom03g00050 pycom11g00060 |
| rosa_chinensis | RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141 |
| rosa_laevigata | RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086 |
| rosa_multiflora | Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170 |
| rosa_rugosa | Rorug03G0155600 Rorug03G0155900 Rorug05G0489500 |
| rosa_samantha | Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900 |
| rosa_wichuraiana | Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 943 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1458 |
| AccBSI | CCGCTC | 1 cut(s) | 1122 |
| AccI | GTMKAC | 1 cut(s) | 1446 |
| AccII | CGCG | 1 cut(s) | 1115 |
| AciI | CCGC | 9 cut(s) | 71, 117, 408, 895, 938, 1008, 1122, 1279, 1364 |
| AclWI | GGATC | 3 cut(s) | 310, 366, 445 |
| AcoI | YGGCCR | 2 cut(s) | 24, 42 |
| AcuI | CTGAAG | 2 cut(s) | 495, 682 |
| AcvI | CACGTG | 1 cut(s) | 94 |
| AdeI | CACNNNGTG | 1 cut(s) | 94 |
| AfaI | GTAC | 9 cut(s) | 110, 509, 556, 974, 1034, 1112, 1169, 1199, 1550 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 40, 73, 355, 901, 951, 1458, 1658 |
| AflIII | ACRYGT | 3 cut(s) | 93, 745, 1113 |
| AgsI | TTSAA | 7 cut(s) | 223, 637, 865, 967, 1195, 1292, 1616 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1436 |
| AjnI | CCWGG | 5 cut(s) | 169, 251, 640, 1372, 1440 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 106, 138, 295, 327 |
| AluBI | AGCT | 9 cut(s) | 299, 372, 529, 724, 931, 1072, 1105, 1159, 1664 |
| AluI | AGCT | 9 cut(s) | 299, 372, 529, 724, 931, 1072, 1105, 1159, 1664 |
| Alw26I | GTCTC | 4 cut(s) | 683, 1132, 1139, 1598 |
| AlwI | GGATC | 3 cut(s) | 310, 366, 445 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1546 |
| AoxI | GGCC | 5 cut(s) | 24, 42, 255, 424, 939 |
| ApeKI | GCWGC | 1 cut(s) | 1463 |
| AseI | ATTAAT | 1 cut(s) | 1050 |
| AspLEI | GCGC | 1 cut(s) | 1007 |
| AspS9I | GGNCC | 6 cut(s) | 64, 76, 173, 255, 914, 940 |
| AsuC2I | CCSGG | 4 cut(s) | 324, 455, 598, 1583 |
| AsuHPI | GGTGA | 3 cut(s) | 241, 1268, 1557 |
| AvaII | GGWCC | 4 cut(s) | 64, 76, 173, 914 |
| AxyI | CCTNAGG | 1 cut(s) | 1641 |
| BalI | TGGCCA | 1 cut(s) | 44 |
| BauI | CACGAG | 2 cut(s) | 1073, 1310 |
| BbrPI | CACGTG | 1 cut(s) | 94 |
| BbsI | GAAGAC | 2 cut(s) | 211, 915 |
| BbvI | GCAGC | 1 cut(s) | 1450 |
| BccI | CCATC | 8 cut(s) | 55, 284, 566, 602, 727, 1073, 1091, 1214 |
| BceAI | ACGGC | 5 cut(s) | 11, 63, 426, 828, 1357 |
| BciT130I | CCWGG | 5 cut(s) | 171, 253, 642, 1374, 1442 |
| BclI | TGATCA | 1 cut(s) | 1228 |
| BcnI | CCSGG | 4 cut(s) | 324, 455, 598, 1583 |
| BcoDI | GTCTC | 4 cut(s) | 683, 1132, 1139, 1598 |
| BfaI | CTAG | 2 cut(s) | 1011, 1415 |
| BfmI | CTRYAG | 1 cut(s) | 1359 |
| BfoI | RGCGCY | 1 cut(s) | 1008 |
| BfuAI | ACCTGC | 1 cut(s) | 943 |
| BisI | GCNGC | 4 cut(s) | 408, 939, 1008, 1464 |
| BlsI | GCNGC | 4 cut(s) | 409, 940, 1009, 1465 |
| BmcAI | AGTACT | 1 cut(s) | 1169 |
| Bme1390I | CCNGG | 9 cut(s) | 171, 253, 324, 455, 598, 642, 1374, 1442, 1583 |
| Bme18I | GGWCC | 4 cut(s) | 64, 76, 173, 914 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1436 |
| BmgT120I | GGNCC | 6 cut(s) | 64, 76, 173, 255, 914, 940 |
| BmiI | GGNNCC | 4 cut(s) | 78, 115, 459, 942 |
| BmrFI | CCNGG | 9 cut(s) | 171, 253, 324, 455, 598, 642, 1374, 1442, 1583 |
| BmsI | GCATC | 4 cut(s) | 128, 409, 695, 1408 |
| BoxI | GACNNNNGTC | 1 cut(s) | 549 |
| BpiI | GAAGAC | 2 cut(s) | 211, 915 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1106 |
| BpuEI | CTTGAG | 3 cut(s) | 515, 665, 1139 |
| BpuMI | CCSGG | 4 cut(s) | 324, 455, 598, 1583 |
| BsaAI | YACGTR | 1 cut(s) | 94 |
| BsaI | GGTCTC | 2 cut(s) | 683, 1132 |
| BsaJI | CCNNGG | 5 cut(s) | 45, 169, 252, 641, 1373 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 106, 136 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 40, 73, 355, 901, 951, 1458, 1658 |
| Bse1I | ACTGG | 2 cut(s) | 509, 1324 |
| Bse21I | CCTNAGG | 1 cut(s) | 1641 |
| BseBI | CCWGG | 5 cut(s) | 171, 253, 642, 1374, 1442 |
| BseDI | CCNNGG | 5 cut(s) | 45, 169, 252, 641, 1373 |
| BseGI | GGATG | 1 cut(s) | 147 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 40, 73, 355, 901, 951, 1458, 1658 |
| BseMII | CTCAG | 5 cut(s) | 539, 941, 1097, 1134, 1155 |
| BseNI | ACTGG | 2 cut(s) | 509, 1324 |
| BseRI | GAGGAG | 2 cut(s) | 114, 1330 |
| BseXI | GCAGC | 1 cut(s) | 1450 |
| Bsh1236I | CGCG | 1 cut(s) | 1115 |
| Bsh1285I | CGRYCG | 1 cut(s) | 54 |
| BshFI | GGCC | 5 cut(s) | 26, 44, 257, 426, 941 |
| BsiEI | CGRYCG | 1 cut(s) | 54 |
| BsiSI | CCGG | 7 cut(s) | 258, 323, 455, 597, 1582, 1601, 1659 |
| BsiWI | CGTACG | 1 cut(s) | 108 |
| BslFI | GGGAC | 3 cut(s) | 1390, 1551, 1598 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 40, 73, 355, 901, 951, 1458, 1658 |
| BsmAI | GTCTC | 4 cut(s) | 683, 1132, 1139, 1598 |
| BsmFI | GGGAC | 3 cut(s) | 1390, 1551, 1598 |
| BsmI | GAATGC | 1 cut(s) | 576 |
| BsnI | GGCC | 5 cut(s) | 26, 44, 257, 426, 941 |
| Bso31I | GGTCTC | 2 cut(s) | 683, 1132 |
| Bsp143I | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| BspACI | CCGC | 9 cut(s) | 71, 117, 408, 895, 938, 1008, 1122, 1279, 1364 |
| BspANI | GGCC | 5 cut(s) | 26, 44, 257, 426, 941 |
| BspCNI | CTCAG | 5 cut(s) | 538, 940, 1096, 1135, 1156 |
| BspFNI | CGCG | 1 cut(s) | 1115 |
| BspHI | TCATGA | 1 cut(s) | 57 |
| BspLI | GGNNCC | 4 cut(s) | 78, 115, 459, 942 |
| BspMI | ACCTGC | 1 cut(s) | 943 |
| BspPI | GGATC | 3 cut(s) | 310, 366, 445 |
| BspTNI | GGTCTC | 2 cut(s) | 683, 1132 |
| BsrBI | CCGCTC | 1 cut(s) | 1122 |
| BsrI | ACTGG | 2 cut(s) | 509, 1324 |
| BssECI | CCNNGG | 5 cut(s) | 45, 169, 252, 641, 1373 |
| BssMI | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| BssSI | CACGAG | 2 cut(s) | 1073, 1310 |
| Bst2BI | CACGAG | 2 cut(s) | 1073, 1310 |
| Bst2UI | CCWGG | 5 cut(s) | 171, 253, 642, 1374, 1442 |
| Bst4CI | ACNGT | 7 cut(s) | 55, 161, 548, 590, 1438, 1490, 1548 |
| Bst6I | CTCTTC | 1 cut(s) | 1388 |
| BstBAI | YACGTR | 1 cut(s) | 94 |
| BstC8I | GCNNGC | 6 cut(s) | 284, 1003, 1103, 1161, 1555, 1637 |
| BstDEI | CTNAG | 7 cut(s) | 525, 927, 1083, 1106, 1143, 1164, 1641 |
| BstDSI | CCRYGG | 1 cut(s) | 45 |
| BstF5I | GGATG | 1 cut(s) | 147 |
| BstFNI | CGCG | 1 cut(s) | 1115 |
| BstH2I | RGCGCY | 1 cut(s) | 1008 |
| BstHHI | GCGC | 1 cut(s) | 1007 |
| BstKTI | GATC | 7 cut(s) | 318, 361, 453, 980, 1231, 1236, 1251 |
| BstMAI | GTCTC | 4 cut(s) | 683, 1132, 1139, 1598 |
| BstMBI | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| BstMCI | CGRYCG | 1 cut(s) | 54 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 423, 1007 |
| BstNI | CCWGG | 5 cut(s) | 171, 253, 642, 1374, 1442 |
| BstNSI | RCATGY | 2 cut(s) | 749, 1600 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 549 |
| BstSCI | CCNGG | 9 cut(s) | 169, 251, 322, 453, 596, 640, 1372, 1440, 1581 |
| BstSFI | CTRYAG | 1 cut(s) | 1359 |
| BstUI | CGCG | 1 cut(s) | 1115 |
| BstV1I | GCAGC | 1 cut(s) | 1450 |
| BstV2I | GAAGAC | 2 cut(s) | 211, 915 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1380 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1641 |
| BsuRI | GGCC | 5 cut(s) | 26, 44, 257, 426, 941 |
| BtgI | CCRYGG | 1 cut(s) | 45 |
| BtsCI | GGATG | 1 cut(s) | 147 |
| BtsI | GCAGTG | 1 cut(s) | 1428 |
| BtsIMutI | CAGTG | 3 cut(s) | 553, 797, 1428 |
| BveI | ACCTGC | 1 cut(s) | 943 |
| Cac8I | GCNNGC | 6 cut(s) | 284, 1003, 1103, 1161, 1555, 1637 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1546 |
| CciI | TCATGA | 1 cut(s) | 57 |
| CfoI | GCGC | 1 cut(s) | 1007 |
| Cfr13I | GGNCC | 6 cut(s) | 64, 76, 173, 255, 914, 940 |
| CseI | GACGC | 3 cut(s) | 909, 1536, 1546 |
| Csp6I | GTAC | 9 cut(s) | 109, 508, 555, 973, 1033, 1111, 1168, 1198, 1549 |
| CviAII | CATG | 7 cut(s) | 58, 397, 746, 782, 841, 1380, 1597 |
| CviQI | GTAC | 9 cut(s) | 109, 508, 555, 973, 1033, 1111, 1168, 1198, 1549 |
| DdeI | CTNAG | 7 cut(s) | 525, 927, 1083, 1106, 1143, 1164, 1641 |
| DpnI | GATC | 7 cut(s) | 317, 360, 452, 979, 1230, 1235, 1250 |
| DpnII | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| DraIII | CACNNNGTG | 1 cut(s) | 94 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1436 |
| EaeI | YGGCCR | 2 cut(s) | 24, 42 |
| Eam1104I | CTCTTC | 1 cut(s) | 1388 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1436 |
| EarI | CTCTTC | 1 cut(s) | 1388 |
| Eco31I | GGTCTC | 2 cut(s) | 683, 1132 |
| Eco47I | GGWCC | 4 cut(s) | 64, 76, 173, 914 |
| Eco57I | CTGAAG | 2 cut(s) | 495, 682 |
| Eco72I | CACGTG | 1 cut(s) | 94 |
| Eco81I | CCTNAGG | 1 cut(s) | 1641 |
| EcoO109I | RGGNCCY | 2 cut(s) | 76, 914 |
| EcoRII | CCWGG | 5 cut(s) | 169, 251, 640, 1372, 1440 |
| EcoT22I | ATGCAT | 1 cut(s) | 402 |
| FaeI | CATG | 7 cut(s) | 61, 400, 749, 785, 844, 1383, 1600 |
| FaqI | GGGAC | 3 cut(s) | 1390, 1551, 1598 |
| FatI | CATG | 7 cut(s) | 57, 396, 745, 781, 840, 1379, 1596 |
| FauI | CCCGC | 1 cut(s) | 1115 |
| FbaI | TGATCA | 1 cut(s) | 1228 |
| FblI | GTMKAC | 1 cut(s) | 1446 |
| Fnu4HI | GCNGC | 4 cut(s) | 408, 939, 1008, 1464 |
| FokI | GGATG | 1 cut(s) | 134 |
| Fsp4HI | GCNGC | 4 cut(s) | 408, 939, 1008, 1464 |
| FspBI | CTAG | 2 cut(s) | 1011, 1415 |
| GlaI | GCGC | 1 cut(s) | 1006 |
| GluI | GCNGC | 4 cut(s) | 408, 939, 1008, 1464 |
| HaeII | RGCGCY | 1 cut(s) | 1008 |
| HaeIII | GGCC | 5 cut(s) | 26, 44, 257, 426, 941 |
| HapII | CCGG | 7 cut(s) | 258, 323, 455, 597, 1582, 1601, 1659 |
| HgaI | GACGC | 3 cut(s) | 909, 1536, 1546 |
| HhaI | GCGC | 1 cut(s) | 1007 |
| Hin1II | CATG | 7 cut(s) | 61, 400, 749, 785, 844, 1383, 1600 |
| Hin6I | GCGC | 1 cut(s) | 1005 |
| HinP1I | GCGC | 1 cut(s) | 1005 |
| HincII | GTYRAC | 1 cut(s) | 1648 |
| HindII | GTYRAC | 1 cut(s) | 1648 |
| HindIII | AAGCTT | 3 cut(s) | 722, 1103, 1157 |
| HinfI | GANTC | 4 cut(s) | 261, 703, 767, 967 |
| HpaI | GTTAAC | 1 cut(s) | 1648 |
| HpaII | CCGG | 7 cut(s) | 258, 323, 455, 597, 1582, 1601, 1659 |
| HphI | GGTGA | 3 cut(s) | 241, 1268, 1557 |
| Hpy166II | GTNNAC | 5 cut(s) | 436, 510, 1078, 1447, 1648 |
| Hpy188I | TCNGA | 8 cut(s) | 315, 330, 616, 708, 876, 1213, 1233, 1513 |
| Hpy8I | GTNNAC | 5 cut(s) | 436, 510, 1078, 1447, 1648 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 6 cut(s) | 437, 731, 1294, 1360, 1421, 1622 |
| HpyCH4III | ACNGT | 7 cut(s) | 55, 161, 548, 590, 1438, 1490, 1548 |
| HpyCH4IV | ACGT | 5 cut(s) | 93, 102, 107, 204, 672 |
| HpyCH4V | TGCA | 3 cut(s) | 400, 1421, 1466 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 423, 1007 |
| HpyF3I | CTNAG | 7 cut(s) | 525, 927, 1083, 1106, 1143, 1164, 1641 |
| HpySE526I | ACGT | 5 cut(s) | 93, 102, 107, 204, 672 |
| Hsp92II | CATG | 7 cut(s) | 61, 400, 749, 785, 844, 1383, 1600 |
| HspAI | GCGC | 1 cut(s) | 1005 |
| Ksp22I | TGATCA | 1 cut(s) | 1228 |
| KspAI | GTTAAC | 1 cut(s) | 1648 |
| Kzo9I | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| LmnI | GCTCC | 2 cut(s) | 897, 1661 |
| Lsp1109I | GCAGC | 1 cut(s) | 1450 |
| LweI | GCATC | 4 cut(s) | 128, 409, 695, 1408 |
| MaeI | CTAG | 2 cut(s) | 1011, 1415 |
| MaeII | ACGT | 5 cut(s) | 93, 102, 107, 204, 672 |
| MaeIII | GTNAC | 4 cut(s) | 103, 668, 808, 1563 |
| MalI | GATC | 7 cut(s) | 317, 360, 452, 979, 1230, 1235, 1250 |
| MbiI | CCGCTC | 1 cut(s) | 1122 |
| MboI | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| MboII | GAAGA | 8 cut(s) | 211, 286, 488, 877, 915, 1345, 1405, 1411 |
| MlsI | TGGCCA | 1 cut(s) | 44 |
| MluCI | AATT | 2 cut(s) | 164, 1047 |
| MluI | ACGCGT | 1 cut(s) | 1113 |
| MluNI | TGGCCA | 1 cut(s) | 44 |
| MlyI | GAGTC | 1 cut(s) | 761 |
| MmeI | TCCRAC | 1 cut(s) | 1491 |
| Mox20I | TGGCCA | 1 cut(s) | 44 |
| Mph1103I | ATGCAT | 1 cut(s) | 402 |
| MscI | TGGCCA | 1 cut(s) | 44 |
| MseI | TTAA | 7 cut(s) | 15, 213, 693, 1050, 1266, 1647, 1666 |
| MslI | CAYNNNNRTG | 1 cut(s) | 395 |
| Msp20I | TGGCCA | 1 cut(s) | 44 |
| MspA1I | CMGCKG | 2 cut(s) | 299, 410 |
| MspI | CCGG | 7 cut(s) | 258, 323, 455, 597, 1582, 1601, 1659 |
| MspR9I | CCNGG | 9 cut(s) | 171, 253, 324, 455, 598, 642, 1374, 1442, 1583 |
| Mva1269I | GAATGC | 1 cut(s) | 576 |
| MvaI | CCWGG | 5 cut(s) | 171, 253, 642, 1374, 1442 |
| MvnI | CGCG | 1 cut(s) | 1115 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 423, 1007 |
| NciI | CCSGG | 4 cut(s) | 324, 455, 598, 1583 |
| NdeII | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| NlaIII | CATG | 7 cut(s) | 61, 400, 749, 785, 844, 1383, 1600 |
| NlaIV | GGNNCC | 4 cut(s) | 78, 115, 459, 942 |
| NmeAIII | GCCGAG | 1 cut(s) | 108 |
| NmuCI | GTSAC | 3 cut(s) | 103, 808, 1563 |
| NsiI | ATGCAT | 1 cut(s) | 402 |
| NspI | RCATGY | 2 cut(s) | 749, 1600 |
| PagI | TCATGA | 1 cut(s) | 57 |
| PciI | ACATGT | 1 cut(s) | 745 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 99, 1308 |
| PctI | GAATGC | 1 cut(s) | 576 |
| PfeI | GAWTC | 3 cut(s) | 261, 703, 967 |
| Pfl23II | CGTACG | 1 cut(s) | 108 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1458 |
| PfoI | TCCNGGA | 2 cut(s) | 596, 1581 |
| PkrI | GCNGC | 4 cut(s) | 409, 940, 1009, 1465 |
| PleI | GAGTC | 1 cut(s) | 761 |
| PmaCI | CACGTG | 1 cut(s) | 94 |
| PmlI | CACGTG | 1 cut(s) | 94 |
| PpsI | GAGTC | 1 cut(s) | 761 |
| Ppu21I | YACGTR | 1 cut(s) | 94 |
| PpuMI | RGGWCCY | 2 cut(s) | 76, 914 |
| PscI | ACATGT | 1 cut(s) | 745 |
| PshAI | GACNNNNGTC | 1 cut(s) | 549 |
| PshBI | ATTAAT | 1 cut(s) | 1050 |
| Psp5II | RGGWCCY | 2 cut(s) | 76, 914 |
| Psp6I | CCWGG | 5 cut(s) | 169, 251, 640, 1372, 1440 |
| PspCI | CACGTG | 1 cut(s) | 94 |
| PspGI | CCWGG | 5 cut(s) | 169, 251, 640, 1372, 1440 |
| PspLI | CGTACG | 1 cut(s) | 108 |
| PspN4I | GGNNCC | 4 cut(s) | 78, 115, 459, 942 |
| PspPI | GGNCC | 6 cut(s) | 64, 76, 173, 255, 914, 940 |
| PspPPI | RGGWCCY | 2 cut(s) | 76, 914 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 92, 124, 323, 355 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1546 |
| PvuII | CAGCTG | 1 cut(s) | 299 |
| RsaI | GTAC | 9 cut(s) | 110, 509, 556, 974, 1034, 1112, 1169, 1199, 1550 |
| RsaNI | GTAC | 9 cut(s) | 109, 508, 555, 973, 1033, 1111, 1168, 1198, 1549 |
| RseI | CAYNNNNRTG | 1 cut(s) | 395 |
| SaqAI | TTAA | 7 cut(s) | 15, 213, 693, 1050, 1266, 1647, 1666 |
| SatI | GCNGC | 4 cut(s) | 408, 939, 1008, 1464 |
| Sau3AI | GATC | 7 cut(s) | 315, 358, 450, 977, 1228, 1233, 1248 |
| Sau96I | GGNCC | 6 cut(s) | 64, 76, 173, 255, 914, 940 |
| ScaI | AGTACT | 1 cut(s) | 1169 |
| SchI | GAGTC | 1 cut(s) | 761 |
| ScrFI | CCNGG | 9 cut(s) | 171, 253, 324, 455, 598, 642, 1374, 1442, 1583 |
| SfaNI | GCATC | 4 cut(s) | 128, 409, 695, 1408 |
| SfcI | CTRYAG | 1 cut(s) | 1359 |
| SinI | GGWCC | 4 cut(s) | 64, 76, 173, 914 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 395 |
| SmlI | CTYRAG | 3 cut(s) | 530, 680, 1154 |
| SmoI | CTYRAG | 3 cut(s) | 530, 680, 1154 |
| Sse9I | AATT | 2 cut(s) | 164, 1047 |
| SsiI | CCGC | 9 cut(s) | 71, 117, 408, 895, 938, 1008, 1122, 1279, 1364 |
| SspMI | CTAG | 2 cut(s) | 1011, 1415 |
| StyD4I | CCNGG | 9 cut(s) | 169, 251, 322, 453, 596, 640, 1372, 1440, 1581 |
| TaaI | ACNGT | 7 cut(s) | 55, 161, 548, 590, 1438, 1490, 1548 |
| TaiI | ACGT | 5 cut(s) | 96, 105, 110, 207, 675 |
| TaqI | TCGA | 8 cut(s) | 188, 231, 543, 729, 1095, 1251, 1302, 1482 |
| TaqII | GACCGA | 1 cut(s) | 776 |
| TasI | AATT | 2 cut(s) | 164, 1047 |
| TatI | WGTACW | 1 cut(s) | 1167 |
| TauI | GCSGC | 3 cut(s) | 410, 941, 1010 |
| TfiI | GAWTC | 3 cut(s) | 261, 703, 967 |
| Tru1I | TTAA | 7 cut(s) | 15, 213, 693, 1050, 1266, 1647, 1666 |
| Tru9I | TTAA | 7 cut(s) | 15, 213, 693, 1050, 1266, 1647, 1666 |
| TscAI | CASTG | 3 cut(s) | 553, 797, 1428 |
| TseFI | GTSAC | 3 cut(s) | 103, 808, 1563 |
| TseI | GCWGC | 1 cut(s) | 1463 |
| Tsp45I | GTSAC | 3 cut(s) | 103, 808, 1563 |
| TspDTI | ATGAA | 3 cut(s) | 17, 734, 1276 |
| TspGWI | ACGGA | 2 cut(s) | 126, 1056 |
| TspRI | CASTG | 3 cut(s) | 553, 797, 1428 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1458 |
| VpaK11BI | GGWCC | 4 cut(s) | 64, 76, 173, 914 |
| VspI | ATTAAT | 1 cut(s) | 1050 |
| XbaI | TCTAGA | 1 cut(s) | 1414 |
| XceI | RCATGY | 2 cut(s) | 749, 1600 |
| XmiI | GTMKAC | 1 cut(s) | 1446 |
| XspI | CTAG | 2 cut(s) | 1011, 1415 |
| ZrmI | AGTACT | 1 cut(s) | 1169 |
| Zsp2I | ATGCAT | 1 cut(s) | 402 |