Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Reverse (-)

87017550 .. 87019409

Gene Structure 1860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G050430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGTCCGGAATGATGCTTCTGCTGCTGCTATGTCTCTCACTGGGGACAATTTCAGTCGTGCACTGTGGAGACCCTACCATAAACTTCGAATGGAATGTCACCCATGGAACCCTCTCTCCACTGGGAGTCCCACAGCAAGTCATTCTCATCAATGGCCAATTTCCTGGTCCCAACATTAATTCCACCACAAACAACAACATAGTCTTGAACGTGTTCAATAACCTGGACGAGCCATTCCTTTTGACATGGAGTGGTATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACCTGGAACTATGTGCCCCATACCCGCGGGTAAGAACTTCACCTATCAGTTCCAGGTGAAGGATCAGATTGGCAGCTTTATATACTATCCAACAACTGCTATGCACAGGGCTGGCGGTGCATTCGGCGGTCTCCGCGTGAATAGTCGTCTACTGATCCCAGTTCCTTATGATACTCCGGAGGATGACTACACTGTCCTCATCGGGGACTGGTACACCAAAAGCCACAACGCTATCAAGAAACTACTTGACAGCGGTCGCAGTATGGCCAGGCCTGACGGTGTCCTCATCAACGGTAAAGATGCAAAGGGCGACGGTAAAGACGAGCCCCTCTTCACCATGAAAGCCGGCAAGACCTACAAGTATAGGATTTGCAATGTAGGTCTTAAGAACACCCTTAACTTTAGGATCCAAGAACACTGGATGACGTTAGTGGAGATGGAGGGCTCCCACACCGTCCAAAATACGTACCAGTCACTTGATGTGCATCTCGGGCAATGCATGCGATTCACCAAAAGCGTGCTCACCGGTAAGGGCATCATACGTTATGAAAATGGTAAGGGCCCTGCTGACCCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAATCTCACTTCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCACTACGGAAAGATTAACATCAGCCGCACCATCAGACTCGCCAACGCCGCATCCAAGGTGGATGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTATGGAGTGGGTGACAAGGTGTTCAAGACTGACACCATCAAGGATGAACCCCCAGAGGACGAGACCAAGGTAGAGGTCCATCCCAATGTTGTGAATCAAACCCACAGAGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCCTCCAGACATGGCACGTGTCGGGATACGCCATCTTTGCCGTCGCCATCGAGCCAGGGAGATGGGACCCAGAAAAAAGGAAAAACTACAACCTTCTTGACGCTGTGAGCAGGCACACAATCCAAGTGTACCCCAAATCATGGGCTGCCATCATGACCTCATTCGACAACCCCGGAATGTGGAATATTAGGTCAGAACATCCGGAAAGGCGCTACCTAGGGCAACAACTCTATATCGCCGTTCCTAATCCTAGCCATTCTACAAGGGACGAGTACAATATGCCAGACACCGCCCTGGTCTGCGGCATCGTTAAGGACATGCCCAAGCCGCCCCCACCTTACCGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

533

Amino Acids

60.04

Weight (kDa)

8.06

Isoelectric Point (pI)

33.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	5.1e-39	Multicopper oxidase
Cu-oxidase	PF00394	158 - 266	9.9e-31	Multicopper oxidase
Cu-oxidase_2	PF07731	362 - 501	1.4e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	482
AccB7I	CCANNNNNTGG	1 cut(s)	1392
AccBSI	CCGCTC	1 cut(s)	915
AccI	GTMKAC	1 cut(s)	439
AccII	CGCG	2 cut(s)	317, 426
AccIII	TCCGGA	3 cut(s)	5, 466, 1453
AclWI	GGATC	4 cut(s)	360, 439, 691, 704
AcoI	YGGCCR	2 cut(s)	154, 555
AcsI	RAATTY	1 cut(s)	271
AcvI	CACGTG	1 cut(s)	1270
AfaI	GTAC	4 cut(s)	503, 758, 1382, 1526
AfiI	CCNNNNNNNGG	5 cut(s)	349, 493, 924, 1392, 1431
AflII	CTTAAG	1 cut(s)	674
AflIII	ACRYGT	2 cut(s)	210, 1269
AgeI	ACCGGT	1 cut(s)	815
AgsI	TTSAA	3 cut(s)	208, 217, 1132
AjnI	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1306, 1545
AloI	GAACNNNNNNTCC	2 cut(s)	100, 132
AluBI	AGCT	4 cut(s)	366, 868, 1042, 1096
AluI	AGCT	4 cut(s)	366, 868, 1042, 1096
Alw21I	GWGCWC	3 cut(s)	63, 813, 870
Alw26I	GTCTC	7 cut(s)	38, 63, 425, 903, 1069, 1163, 1209
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	4 cut(s)	360, 439, 691, 704
Ama87I	CYCGRG	2 cut(s)	779, 863
Aor13HI	TCCGGA	3 cut(s)	5, 466, 1453
AoxI	GGCC	5 cut(s)	154, 555, 560, 850, 876
ApaI	GGGCCC	1 cut(s)	854
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	5 cut(s)	22, 25, 363, 944, 1397
ApoI	RAATTY	1 cut(s)	271
ArsI	GACNNNNNNTTYG	2 cut(s)	81, 113
AseI	ATTAAT	1 cut(s)	177
AsiGI	ACCGGT	1 cut(s)	815
Asp700I	GAANNNNTTC	1 cut(s)	212
AspA2I	CCTAGG	1 cut(s)	1468
AspLEI	GCGC	1 cut(s)	1464
AspS9I	GGNCC	7 cut(s)	167, 850, 851, 877, 1075, 1183, 1318
AsuC2I	CCSGG	1 cut(s)	1425
AsuHPI	GGTGA	7 cut(s)	91, 322, 358, 616, 790, 805, 1130
AsuII	TTCGAA	1 cut(s)	87
AvaI	CYCGRG	2 cut(s)	779, 863
AvaII	GGWCC	4 cut(s)	167, 1075, 1183, 1318
AvrII	CCTAGG	1 cut(s)	1468
AxyI	CCTNAGG	2 cut(s)	873, 960
BaeGI	GKGCMC	3 cut(s)	63, 308, 854
BalI	TGGCCA	2 cut(s)	156, 557
BamHI	GGATCC	1 cut(s)	696
BanII	GRGCYC	5 cut(s)	618, 737, 854, 870, 968
BauI	CACGAG	1 cut(s)	1244
BbrPI	CACGTG	1 cut(s)	1270
Bbv12I	GWGCWC	3 cut(s)	63, 813, 870
BbvI	GCAGC	5 cut(s)	9, 12, 375, 931, 1384
BceAI	ACGGC	2 cut(s)	1277, 1475
BciT130I	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1308, 1547
BciVI	GTATCC	2 cut(s)	266, 1271
BcnI	CCSGG	1 cut(s)	1425
BcoDI	GTCTC	7 cut(s)	38, 63, 425, 903, 1069, 1163, 1209
BfaI	CTAG	4 cut(s)	939, 948, 1469, 1503
BfoI	RGCGCY	1 cut(s)	1465
BfrI	CTTAAG	1 cut(s)	674
BfuI	GTATCC	2 cut(s)	266, 1271
BisI	GCNGC	9 cut(s)	23, 26, 364, 945, 997, 1020, 1398, 1555, 1580
BlnI	CCTAGG	1 cut(s)	1468
BlsI	GCNGC	9 cut(s)	24, 27, 365, 946, 998, 1021, 1399, 1556, 1581
Bme1390I	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1308, 1425, 1547
Bme18I	GGWCC	4 cut(s)	167, 1075, 1183, 1318
BmeT110I	CYCGRG	2 cut(s)	779, 863
BmgT120I	GGNCC	7 cut(s)	167, 850, 851, 877, 1075, 1183, 1318
BmrFI	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1308, 1425, 1547
BmrI	ACTGGG	3 cut(s)	50, 131, 443
BmsI	GCATC	6 cut(s)	3, 580, 784, 834, 1031, 1566
BmuI	ACTGGG	3 cut(s)	50, 131, 443
BoxI	GACNNNNGTC	1 cut(s)	543
BpmI	CTGGAG	1 cut(s)	1241
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	1 cut(s)	1076
BpuMI	CCSGG	1 cut(s)	1425
BsaAI	YACGTR	2 cut(s)	756, 1270
BsaBI	GATNNNNATC	2 cut(s)	774, 989
BsaI	GGTCTC	4 cut(s)	63, 425, 903, 1163
BsaJI	CCNNGG	8 cut(s)	103, 315, 1026, 1173, 1307, 1423, 1468, 1545
BsaWI	WCCGGW	5 cut(s)	5, 466, 815, 1453, 1593
BsaXI	ACNNNNNCTCC	4 cut(s)	100, 130, 1049, 1079
Bsc4I	CCNNNNNNNGG	5 cut(s)	349, 493, 924, 1392, 1431
Bse118I	RCCGGY	2 cut(s)	635, 815
Bse1I	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 907
Bse21I	CCTNAGG	2 cut(s)	873, 960
Bse3DI	GCAATG	2 cut(s)	670, 791
Bse8I	GATNNNNATC	2 cut(s)	774, 989
BseAI	TCCGGA	3 cut(s)	5, 466, 1453
BseBI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1308, 1547
BseDI	CCNNGG	8 cut(s)	103, 315, 1026, 1173, 1307, 1423, 1468, 1545
BseGI	GGATG	8 cut(s)	478, 717, 893, 1022, 1039, 1156, 1186, 1450
BseJI	GATNNNNATC	2 cut(s)	774, 989
BseLI	CCNNNNNNNGG	5 cut(s)	349, 493, 924, 1392, 1431
BseMI	GCAATG	2 cut(s)	670, 791
BseMII	CTCAG	2 cut(s)	864, 974
BseNI	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 907
BseSI	GKGCMC	3 cut(s)	63, 308, 854
BseXI	GCAGC	5 cut(s)	9, 12, 375, 931, 1384
Bsh1236I	CGCG	2 cut(s)	317, 426
Bsh1285I	CGRYCG	1 cut(s)	547
BshFI	GGCC	5 cut(s)	156, 557, 562, 852, 878
BshTI	ACCGGT	1 cut(s)	815
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	3 cut(s)	63, 813, 870
BsiHKCI	CYCGRG	2 cut(s)	779, 863
BsiSI	CCGG	7 cut(s)	6, 467, 636, 816, 1425, 1454, 1594
BslFI	GGGAC	6 cut(s)	58, 113, 153, 509, 1331, 1532
BslI	CCNNNNNNNGG	5 cut(s)	349, 493, 924, 1392, 1431
BsmAI	GTCTC	7 cut(s)	38, 63, 425, 903, 1069, 1163, 1209
BsmFI	GGGAC	6 cut(s)	58, 113, 153, 509, 1331, 1532
BsmI	GAATGC	1 cut(s)	410
BsnI	GGCC	5 cut(s)	156, 557, 562, 852, 878
Bso31I	GGTCTC	4 cut(s)	63, 425, 903, 1163
BsoBI	CYCGRG	2 cut(s)	779, 863
Bsp119I	TTCGAA	1 cut(s)	87
Bsp120I	GGGCCC	1 cut(s)	850
Bsp1286I	GDGCHC	8 cut(s)	63, 308, 618, 737, 813, 854, 870, 968
Bsp13I	TCCGGA	3 cut(s)	5, 466, 1453
Bsp143I	GATC	3 cut(s)	352, 444, 696
Bsp19I	CCATGG	1 cut(s)	103
BspANI	GGCC	5 cut(s)	156, 557, 562, 852, 878
BspCNI	CTCAG	2 cut(s)	865, 973
BspEI	TCCGGA	3 cut(s)	5, 466, 1453
BspFNI	CGCG	2 cut(s)	317, 426
BspHI	TCATGA	1 cut(s)	1404
BspPI	GGATC	4 cut(s)	360, 439, 691, 704
BspQI	GCTCTTC	1 cut(s)	1244
BspT104I	TTCGAA	1 cut(s)	87
BspTI	CTTAAG	1 cut(s)	674
BspTNI	GGTCTC	4 cut(s)	63, 425, 903, 1163
BsrBI	CCGCTC	1 cut(s)	915
BsrDI	GCAATG	2 cut(s)	670, 791
BsrFI	RCCGGY	2 cut(s)	635, 815
BsrI	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 907
BssAI	RCCGGY	2 cut(s)	635, 815
BssECI	CCNNGG	8 cut(s)	103, 315, 1026, 1173, 1307, 1423, 1468, 1545
BssMI	GATC	3 cut(s)	352, 444, 696
BssSI	CACGAG	1 cut(s)	1244
BssT1I	CCWWGG	4 cut(s)	103, 1026, 1173, 1468
Bst2BI	CACGAG	1 cut(s)	1244
Bst2UI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1308, 1547
Bst4CI	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
Bst6I	CTCTTC	2 cut(s)	626, 1244
BstAFI	CTTAAG	1 cut(s)	674
BstAPI	GCANNNNNTGC	1 cut(s)	790
BstBAI	YACGTR	2 cut(s)	756, 1270
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	7 cut(s)	403, 637, 791, 809, 1040, 1098, 1364
BstDEI	CTNAG	2 cut(s)	873, 960
BstDSI	CCRYGG	2 cut(s)	103, 315
BstF5I	GGATG	8 cut(s)	478, 717, 893, 1022, 1039, 1156, 1186, 1450
BstFNI	CGCG	2 cut(s)	317, 426
BstH2I	RGCGCY	1 cut(s)	1465
BstHHI	GCGC	1 cut(s)	1464
BstKTI	GATC	3 cut(s)	355, 447, 699
BstMAI	GTCTC	7 cut(s)	38, 63, 425, 903, 1069, 1163, 1209
BstMBI	GATC	3 cut(s)	352, 444, 696
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	9 cut(s)	22, 407, 423, 781, 790, 1019, 1044, 1289, 1579
BstNI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1308, 1547
BstNSI	RCATGY	2 cut(s)	793, 1573
BstPAI	GACNNNNGTC	1 cut(s)	543
BstSCI	CCNGG	8 cut(s)	163, 222, 292, 342, 557, 1306, 1423, 1545
BstSLI	GKGCMC	3 cut(s)	63, 308, 854
BstSNI	TACGTA	1 cut(s)	756
BstUI	CGCG	2 cut(s)	317, 426
BstV1I	GCAGC	5 cut(s)	9, 12, 375, 931, 1384
BstX2I	RGATCY	1 cut(s)	696
BstXI	CCANNNNNNTGG	3 cut(s)	164, 888, 1314
BstYI	RGATCY	1 cut(s)	696
Bsu36I	CCTNAGG	2 cut(s)	873, 960
BsuI	GTATCC	2 cut(s)	266, 1271
BsuRI	GGCC	5 cut(s)	156, 557, 562, 852, 878
BtgI	CCRYGG	2 cut(s)	103, 315
BtsCI	GGATG	8 cut(s)	478, 717, 893, 1022, 1039, 1156, 1186, 1450
BtsIMutI	CAGTG	5 cut(s)	38, 61, 119, 480, 706
Cac8I	GCNNGC	7 cut(s)	403, 637, 791, 809, 1040, 1098, 1364
CciI	TCATGA	1 cut(s)	1404
CfoI	GCGC	1 cut(s)	1464
Cfr10I	RCCGGY	2 cut(s)	635, 815
Cfr13I	GGNCC	7 cut(s)	167, 850, 851, 877, 1075, 1183, 1318
Cfr42I	CCGCGG	1 cut(s)	318
CseI	GACGC	1 cut(s)	1361
Csp6I	GTAC	4 cut(s)	502, 757, 1381, 1525
CspAI	ACCGGT	1 cut(s)	815
CviQI	GTAC	4 cut(s)	502, 757, 1381, 1525
DdeI	CTNAG	2 cut(s)	873, 960
DpnI	GATC	3 cut(s)	354, 446, 698
DpnII	GATC	3 cut(s)	352, 444, 696
DrdI	GACNNNNNNGTC	1 cut(s)	482
DseDI	GACNNNNNNGTC	1 cut(s)	482
EaeI	YGGCCR	2 cut(s)	154, 555
Eam1104I	CTCTTC	2 cut(s)	626, 1244
EarI	CTCTTC	2 cut(s)	626, 1244
Ecl136II	GAGCTC	1 cut(s)	868
Eco105I	TACGTA	1 cut(s)	756
Eco130I	CCWWGG	4 cut(s)	103, 1026, 1173, 1468
Eco147I	AGGCCT	1 cut(s)	562
Eco24I	GRGCYC	5 cut(s)	618, 737, 854, 870, 968
Eco31I	GGTCTC	4 cut(s)	63, 425, 903, 1163
Eco47I	GGWCC	4 cut(s)	167, 1075, 1183, 1318
Eco53kI	GAGCTC	1 cut(s)	868
Eco72I	CACGTG	1 cut(s)	1270
Eco81I	CCTNAGG	2 cut(s)	873, 960
Eco88I	CYCGRG	2 cut(s)	779, 863
EcoICRI	GAGCTC	1 cut(s)	868
EcoO109I	RGGNCCY	4 cut(s)	850, 851, 877, 1318
EcoRI	GAATTC	1 cut(s)	271
EcoRII	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1306, 1545
EcoT14I	CCWWGG	4 cut(s)	103, 1026, 1173, 1468
EcoT22I	ATGCAT	1 cut(s)	791
EcoT38I	GRGCYC	5 cut(s)	618, 737, 854, 870, 968
ErhI	CCWWGG	4 cut(s)	103, 1026, 1173, 1468
FaqI	GGGAC	6 cut(s)	58, 113, 153, 509, 1331, 1532
FauI	CCCGC	2 cut(s)	310, 322
FblI	GTMKAC	1 cut(s)	439
Fnu4HI	GCNGC	9 cut(s)	23, 26, 364, 945, 997, 1020, 1398, 1555, 1580
FokI	GGATG	8 cut(s)	485, 724, 900, 1009, 1046, 1163, 1173, 1437
FriOI	GRGCYC	5 cut(s)	618, 737, 854, 870, 968
Fsp4HI	GCNGC	9 cut(s)	23, 26, 364, 945, 997, 1020, 1398, 1555, 1580
FspBI	CTAG	4 cut(s)	939, 948, 1469, 1503
GlaI	GCGC	1 cut(s)	1463
GluI	GCNGC	9 cut(s)	23, 26, 364, 945, 997, 1020, 1398, 1555, 1580
GsuI	CTGGAG	1 cut(s)	1241
HaeII	RGCGCY	1 cut(s)	1465
HaeIII	GGCC	5 cut(s)	156, 557, 562, 852, 878
HapII	CCGG	7 cut(s)	6, 467, 636, 816, 1425, 1454, 1594
HgaI	GACGC	1 cut(s)	1361
HhaI	GCGC	1 cut(s)	1464
Hin6I	GCGC	1 cut(s)	1462
HinP1I	GCGC	1 cut(s)	1462
HindIII	AAGCTT	1 cut(s)	1094
HinfI	GANTC	6 cut(s)	126, 795, 928, 1008, 1062, 1201
HpaII	CCGG	7 cut(s)	6, 467, 636, 816, 1425, 1454, 1594
HphI	GGTGA	7 cut(s)	91, 322, 358, 616, 790, 805, 1130
Hpy166II	GTNNAC	5 cut(s)	61, 440, 504, 1075, 1381
Hpy188I	TCNGA	3 cut(s)	357, 1007, 1447
Hpy8I	GTNNAC	5 cut(s)	61, 440, 504, 1075, 1381
Hpy99I	CGWCG	2 cut(s)	605, 1298
HpyAV	CCTTC	4 cut(s)	343, 878, 928, 1355
HpyCH4III	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
HpyCH4IV	ACGT	5 cut(s)	210, 716, 755, 832, 1269
HpyCH4V	TGCA	7 cut(s)	61, 394, 410, 593, 663, 775, 789
HpyF10VI	GCNNNNNNNGC	9 cut(s)	22, 407, 423, 781, 790, 1019, 1044, 1289, 1579
HpyF3I	CTNAG	2 cut(s)	873, 960
HpySE526I	ACGT	5 cut(s)	210, 716, 755, 832, 1269
HspAI	GCGC	1 cut(s)	1462
KflI	GGGWCCC	1 cut(s)	1318
Kpn2I	TCCGGA	3 cut(s)	5, 466, 1453
KroI	GCCGGC	1 cut(s)	635
KroNI	GCCGGC	1 cut(s)	637
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	3 cut(s)	352, 444, 696
LguI	GCTCTTC	1 cut(s)	1244
LmnI	GCTCC	4 cut(s)	740, 873, 920, 971
Lsp1109I	GCAGC	5 cut(s)	9, 12, 375, 931, 1384
LweI	GCATC	6 cut(s)	3, 580, 784, 834, 1031, 1566
MaeI	CTAG	4 cut(s)	939, 948, 1469, 1503
MaeII	ACGT	5 cut(s)	210, 716, 755, 832, 1269
MaeIII	GTNAC	3 cut(s)	97, 762, 1118
MalI	GATC	3 cut(s)	354, 446, 698
MbiI	CCGCTC	1 cut(s)	915
MboI	GATC	3 cut(s)	352, 444, 696
MboII	GAAGA	3 cut(s)	280, 613, 1261
MflI	RGATCY	1 cut(s)	696
MhlI	GDGCHC	8 cut(s)	63, 308, 618, 737, 813, 854, 870, 968
MlsI	TGGCCA	2 cut(s)	156, 557
MluCI	AATT	4 cut(s)	48, 158, 178, 271
MluNI	TGGCCA	2 cut(s)	156, 557
MlyI	GAGTC	3 cut(s)	135, 1002, 1071
MmeI	TCCRAC	2 cut(s)	404, 905
Mox20I	TGGCCA	2 cut(s)	156, 557
Mph1103I	ATGCAT	1 cut(s)	791
MroI	TCCGGA	3 cut(s)	5, 466, 1453
MroNI	GCCGGC	1 cut(s)	635
MroXI	GAANNNNTTC	1 cut(s)	212
MscI	TGGCCA	2 cut(s)	156, 557
MseI	TTAA	6 cut(s)	177, 675, 687, 903, 987, 1563
MslI	CAYNNNNRTG	1 cut(s)	1191
Msp20I	TGGCCA	2 cut(s)	156, 557
MspA1I	CMGCKG	2 cut(s)	317, 543
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	7 cut(s)	6, 467, 636, 816, 1425, 1454, 1594
MspR9I	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1308, 1425, 1547
Mva1269I	GAATGC	1 cut(s)	410
MvaI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1308, 1547
MvnI	CGCG	2 cut(s)	317, 426
MwoI	GCNNNNNNNGC	9 cut(s)	22, 407, 423, 781, 790, 1019, 1044, 1289, 1579
NaeI	GCCGGC	1 cut(s)	637
NciI	CCSGG	1 cut(s)	1425
NcoI	CCATGG	1 cut(s)	103
NdeII	GATC	3 cut(s)	352, 444, 696
NgoMIV	GCCGGC	1 cut(s)	635
NmuCI	GTSAC	3 cut(s)	97, 762, 1118
NsiI	ATGCAT	1 cut(s)	791
NspI	RCATGY	2 cut(s)	793, 1573
NspV	TTCGAA	1 cut(s)	87
PaeI	GCATGC	1 cut(s)	793
PagI	TCATGA	1 cut(s)	1404
PceI	AGGCCT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1244
PcsI	WCGNNNNNNNCGW	1 cut(s)	609
PctI	GAATGC	1 cut(s)	410
PdiI	GCCGGC	1 cut(s)	637
PdmI	GAANNNNTTC	1 cut(s)	212
PfeI	GAWTC	3 cut(s)	795, 928, 1201
PflFI	GACNNNGTC	1 cut(s)	569
PflMI	CCANNNNNTGG	1 cut(s)	1392
PinAI	ACCGGT	1 cut(s)	815
PkrI	GCNGC	9 cut(s)	24, 27, 365, 946, 998, 1021, 1399, 1556, 1581
PleI	GAGTC	3 cut(s)	134, 1002, 1070
PmaCI	CACGTG	1 cut(s)	1270
PmlI	CACGTG	1 cut(s)	1270
PpsI	GAGTC	3 cut(s)	134, 1002, 1070
Ppu21I	YACGTR	2 cut(s)	756, 1270
PpuMI	RGGWCCY	1 cut(s)	1318
PshAI	GACNNNNGTC	1 cut(s)	543
PshBI	ATTAAT	1 cut(s)	177
Psp124BI	GAGCTC	1 cut(s)	870
Psp5II	RGGWCCY	1 cut(s)	1318
Psp6I	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1306, 1545
PspCI	CACGTG	1 cut(s)	1270
PspGI	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1306, 1545
PspOMI	GGGCCC	1 cut(s)	850
PspPI	GGNCC	7 cut(s)	167, 850, 851, 877, 1075, 1183, 1318
PspPPI	RGGWCCY	1 cut(s)	1318
PsuI	RGATCY	1 cut(s)	696
PsyI	GACNNNGTC	1 cut(s)	569
RsaI	GTAC	4 cut(s)	503, 758, 1382, 1526
RsaNI	GTAC	4 cut(s)	502, 757, 1381, 1525
RseI	CAYNNNNRTG	1 cut(s)	1191
SacI	GAGCTC	1 cut(s)	870
SacII	CCGCGG	1 cut(s)	318
SapI	GCTCTTC	1 cut(s)	1244
SaqAI	TTAA	6 cut(s)	177, 675, 687, 903, 987, 1563
SatI	GCNGC	9 cut(s)	23, 26, 364, 945, 997, 1020, 1398, 1555, 1580
Sau3AI	GATC	3 cut(s)	352, 444, 696
Sau96I	GGNCC	7 cut(s)	167, 850, 851, 877, 1075, 1183, 1318
SchI	GAGTC	3 cut(s)	135, 1002, 1071
ScrFI	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1308, 1425, 1547
SduI	GDGCHC	8 cut(s)	63, 308, 618, 737, 813, 854, 870, 968
SfaNI	GCATC	6 cut(s)	3, 580, 784, 834, 1031, 1566
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	87
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	4 cut(s)	167, 1075, 1183, 1318
SmiMI	CAYNNNNRTG	1 cut(s)	1191
SmlI	CTYRAG	2 cut(s)	674, 1091
SmoI	CTYRAG	2 cut(s)	674, 1091
SnaBI	TACGTA	1 cut(s)	756
SphI	GCATGC	1 cut(s)	793
Sse9I	AATT	4 cut(s)	48, 158, 178, 271
SseBI	AGGCCT	1 cut(s)	562
SspI	AATATT	1 cut(s)	1438
SspMI	CTAG	4 cut(s)	939, 948, 1469, 1503
SstI	GAGCTC	1 cut(s)	870
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	8 cut(s)	163, 222, 292, 342, 557, 1306, 1423, 1545
StyI	CCWWGG	4 cut(s)	103, 1026, 1173, 1468
TaaI	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
TaiI	ACGT	5 cut(s)	213, 719, 758, 835, 1272
TaqI	TCGA	3 cut(s)	87, 1302, 1416
TasI	AATT	4 cut(s)	48, 158, 178, 271
TatI	WGTACW	1 cut(s)	1524
TauI	GCSGC	4 cut(s)	999, 1022, 1557, 1582
TfiI	GAWTC	3 cut(s)	795, 928, 1201
Tru1I	TTAA	6 cut(s)	177, 675, 687, 903, 987, 1563
Tru9I	TTAA	6 cut(s)	177, 675, 687, 903, 987, 1563
TscAI	CASTG	5 cut(s)	45, 68, 126, 487, 713
TseFI	GTSAC	3 cut(s)	97, 762, 1118
TseI	GCWGC	5 cut(s)	22, 25, 363, 944, 1397
Tsp45I	GTSAC	3 cut(s)	97, 762, 1118
TspDTI	ATGAA	4 cut(s)	264, 644, 852, 1167
TspGWI	ACGGA	4 cut(s)	300, 911, 993, 1074
TspRI	CASTG	5 cut(s)	45, 68, 126, 487, 713
Tth111I	GACNNNGTC	1 cut(s)	569
Van91I	CCANNNNNTGG	1 cut(s)	1392
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	4 cut(s)	167, 1075, 1183, 1318
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	1 cut(s)	271
XceI	RCATGY	2 cut(s)	793, 1573
XmaJI	CCTAGG	1 cut(s)	1468
XmiI	GTMKAC	1 cut(s)	439
XmnI	GAANNNNTTC	1 cut(s)	212
XspI	CTAG	4 cut(s)	939, 948, 1469, 1503
Zsp2I	ATGCAT	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.