Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Forward (+)

38231205 .. 38234498

Gene Structure 3294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g46080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTCGGGAATGATGCATCTGCTGCTTCTATGTCTCTCACTGGGGACAATTTCAGTCGTGCACTGCGGAGACCCTACCATATTCTTCGAATGGAATGTCTCTCACGGAACCCTCTCTCCACTGGGATCCCCACAGCAAGTCATTCTCATCAATGGCCAGTTTCCTGGGCCGAACATCAATTCCACCACAAACAACAACGTAGTGGTGAACGTGTTCAATAACCTGGACGAGCCATTCCTTTTGACATGGAGTGGCATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACTTGGAACTATGTGCCCCATACCCGCTGGTACGAACTTCACCTATCACTTCCAAGTGAAGGATCAGATTGGCAGCTTTATATACTATCCAACAACTGCTATGCACAGGGCGGGGGGTGCATTTGGCGGTCTCCGCGTGAATAGTCGTCCACTGATCCCAGTTCCCTATGATACACCGGAGGAGGACTACACTGTCCTCATCGGGGACTGGTACAAAAAAAGCCACATTGCTCTCAAGCAACAACTGGACAGCGGCCGCACTCTGGCCAGGCCTGACGGCGTCCTCATCAACGGTAAGGATGCAAAGGGAGATGGTAAAGACGAGCCCCTCTTCACCATGAAGGCCGGCAAGACATACAAGTTTAGGATCTGCAATATAGGTGTCAAGAGCAGCCTTAACTTTAGGATCCAAGAGCACTGGATGATGTTGGTGGAAATGGAGGGCTCCCACACCGTCCAAAACACGTACCAGTCACTTGACGTGCATCTCGGTCAATGCATGGCCGTGCTAGTCACAGCCGACCAAACCCCGAAAGACTATTACATGGTAGCATCCACAAGATTCACCAAAACCGTGCTCACCGGTAAGGGCATCTTACGGTATGAAAATGGTAAGGGCCCTGCTGACTCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTCAACCAATTCCGTTCCTTCCGTTGGAATCTCTCCTCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCATTACGGTAGGATTAACATCACCCGCACCATGAAACTCGTCAACGCCGCCACCCAGGTGGACGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTTCGGAGTGGGTGACAAGGTGTTCAAGACCGGCAGCATCAAGGATGACCCCCCAGCTGACGTGGACACCAAGGCCGTCATACTACCCAACGTTGTGGATCAAACCCACAGAGATTTTGTGGAGATCATCTTTGAGAACCACGAGAAGAGCCTGCAGACATGGCACGTCTCGGGATACGCCGTCTTCGCTGTCGCCATCGAGCCAGGGACATGGACACCGGAAAAGAGAAAAAACTACAACCTTCTTGACGCCGTGAGCAGGCACACAATCCAAGTGTACCCCAACTCATGGGCTGCCATCATGACAGCATTCGACAACCCCGGAATGTGGAATATTAGGTCTGAAAATCCGGAAAGGCGCTACTTAGGGCAGCAACTCTATGTCACCGTTCCTAATACTGCGCGTTCTATCAGGGACGAGTACAACATGCCAGATAGCGCCCAGCTCTGCGGCATCGTTAAGGAATTGCCCAGGCCCCCACCTTACGGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

553

Amino Acids

61.78

Weight (kDa)

7.67

Isoelectric Point (pI)

37.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	9.5e-39	Multicopper oxidase
Cu-oxidase	PF00394	158 - 300	5.5e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	382 - 520	2.7e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	482
AccB7I	CCANNNNNTGG	1 cut(s)	1452
AccII	CGCG	2 cut(s)	426, 1567
AccIII	TCCGGA	1 cut(s)	1513
AclI	AACGTT	1 cut(s)	1254
AclWI	GGATC	8 cut(s)	120, 133, 360, 439, 665, 691, 704, 1269
AcoI	YGGCCR	4 cut(s)	154, 544, 555, 792
AcsI	RAATTY	1 cut(s)	271
AcyI	GRCGYC	2 cut(s)	570, 1413
AfaI	GTAC	5 cut(s)	322, 503, 758, 1442, 1586
AfiI	CCNNNNNNNGG	8 cut(s)	349, 493, 553, 981, 1422, 1452, 1491, 1649
AflIII	ACRYGT	2 cut(s)	210, 753
AgeI	ACCGGT	1 cut(s)	872
AgsI	TTSAA	2 cut(s)	217, 1189
AjiI	CACGTC	3 cut(s)	772, 1225, 1330
AjnI	CCWGG	6 cut(s)	163, 222, 557, 1083, 1366, 1634
AleI	CACNNNNGTG	1 cut(s)	1085
AloI	GAACNNNNNNTCC	4 cut(s)	100, 132, 164, 196
AluBI	AGCT	6 cut(s)	366, 925, 1099, 1153, 1220, 1609
AluI	AGCT	6 cut(s)	366, 925, 1099, 1153, 1220, 1609
Alw21I	GWGCWC	4 cut(s)	63, 708, 870, 927
Alw26I	GTCTC	7 cut(s)	38, 63, 103, 425, 960, 1126, 1336
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	8 cut(s)	120, 133, 360, 439, 665, 691, 704, 1269
Ama87I	CYCGRG	1 cut(s)	1333
Aor13HI	TCCGGA	1 cut(s)	1513
ApaI	GGGCCC	1 cut(s)	911
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	7 cut(s)	22, 363, 681, 1001, 1197, 1457, 1534
ApoI	RAATTY	1 cut(s)	271
ArsI	GACNNNNNNTTYG	2 cut(s)	81, 113
AsiGI	ACCGGT	1 cut(s)	872
Asp700I	GAANNNNTTC	1 cut(s)	212
AspLEI	GCGC	3 cut(s)	1524, 1567, 1604
AspS9I	GGNCC	6 cut(s)	167, 907, 908, 934, 1132, 1638
AsuC2I	CCSGG	1 cut(s)	1485
AsuHPI	GGTGA	8 cut(s)	217, 322, 616, 847, 862, 1042, 1187, 1540
AsuII	TTCGAA	1 cut(s)	87
AvaI	CYCGRG	1 cut(s)	1333
AvaII	GGWCC	1 cut(s)	1132
AxyI	CCTNAGG	2 cut(s)	930, 1017
BaeGI	GKGCMC	3 cut(s)	63, 308, 911
BalI	TGGCCA	2 cut(s)	156, 557
BamHI	GGATCC	2 cut(s)	125, 696
BanII	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
BauI	CACGAG	1 cut(s)	1304
BbsI	GAAGAC	1 cut(s)	1339
Bbv12I	GWGCWC	4 cut(s)	63, 708, 870, 927
BbvI	GCAGC	7 cut(s)	9, 375, 693, 988, 1209, 1444, 1546
BccI	CCATC	4 cut(s)	596, 939, 1367, 1469
BceAI	ACGGC	6 cut(s)	583, 779, 1108, 1223, 1328, 1400
BciT130I	CCWGG	6 cut(s)	165, 224, 559, 1085, 1368, 1636
BciVI	GTATCC	1 cut(s)	1331
BcnI	CCSGG	1 cut(s)	1485
BcoDI	GTCTC	7 cut(s)	38, 63, 103, 425, 960, 1126, 1336
BfaI	CTAG	3 cut(s)	800, 996, 1005
BfmI	CTRYAG	1 cut(s)	1316
BfoI	RGCGCY	2 cut(s)	1525, 1605
BfuI	GTATCC	1 cut(s)	1331
Bme1390I	CCNGG	7 cut(s)	165, 224, 559, 1085, 1368, 1485, 1636
Bme18I	GGWCC	1 cut(s)	1132
BmeT110I	CYCGRG	1 cut(s)	1333
BmgBI	CACGTC	3 cut(s)	772, 1225, 1330
BmgT120I	GGNCC	6 cut(s)	167, 907, 908, 934, 1132, 1638
BmiI	GGNNCC	9 cut(s)	109, 127, 698, 736, 909, 936, 1024, 1134, 1640
BmrFI	CCNGG	7 cut(s)	165, 224, 559, 1085, 1368, 1485, 1636
BmrI	ACTGGG	3 cut(s)	50, 131, 443
BmsI	GCATC	9 cut(s)	3, 25, 264, 580, 784, 851, 891, 1209, 1626
BmuI	ACTGGG	3 cut(s)	50, 131, 443
BpiI	GAAGAC	1 cut(s)	1339
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	2 cut(s)	509, 1133
BpuMI	CCSGG	1 cut(s)	1485
BsaAI	YACGTR	1 cut(s)	756
BsaBI	GATNNNNATC	1 cut(s)	1046
BsaHI	GRCGYC	2 cut(s)	570, 1413
BsaI	GGTCTC	3 cut(s)	63, 425, 960
BsaJI	CCNNGG	6 cut(s)	164, 1083, 1233, 1367, 1483, 1634
BsaWI	WCCGGW	4 cut(s)	466, 872, 1381, 1513
BsaXI	ACNNNNNCTCC	4 cut(s)	100, 130, 1106, 1136
Bsc4I	CCNNNNNNNGG	8 cut(s)	349, 493, 553, 981, 1422, 1452, 1491, 1649
Bse118I	RCCGGY	3 cut(s)	635, 872, 1193
Bse1I	ACTGG	8 cut(s)	45, 126, 157, 449, 503, 540, 713, 760
Bse21I	CCTNAGG	2 cut(s)	930, 1017
Bse3DI	GCAATG	1 cut(s)	516
Bse8I	GATNNNNATC	1 cut(s)	1046
BseAI	TCCGGA	1 cut(s)	1513
BseBI	CCWGG	6 cut(s)	165, 224, 559, 1085, 1368, 1636
BseDI	CCNNGG	6 cut(s)	164, 1083, 1233, 1367, 1483, 1634
BseGI	GGATG	6 cut(s)	255, 595, 717, 842, 950, 1213
BseJI	GATNNNNATC	1 cut(s)	1046
BseLI	CCNNNNNNNGG	8 cut(s)	349, 493, 553, 981, 1422, 1452, 1491, 1649
BseMI	GCAATG	1 cut(s)	516
BseMII	CTCAG	2 cut(s)	921, 1031
BseNI	ACTGG	8 cut(s)	45, 126, 157, 449, 503, 540, 713, 760
BseRI	GAGGAG	2 cut(s)	485, 982
BseSI	GKGCMC	3 cut(s)	63, 308, 911
BseX3I	CGGCCG	1 cut(s)	544
BseXI	GCAGC	7 cut(s)	9, 375, 693, 988, 1209, 1444, 1546
BseYI	CCCAGC	2 cut(s)	1216, 1605
Bsh1236I	CGCG	2 cut(s)	426, 1567
Bsh1285I	CGRYCG	1 cut(s)	547
BshTI	ACCGGT	1 cut(s)	872
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	4 cut(s)	63, 708, 870, 927
BsiHKCI	CYCGRG	1 cut(s)	1333
BsiSI	CCGG	7 cut(s)	467, 636, 873, 1194, 1382, 1485, 1514
BslFI	GGGAC	4 cut(s)	58, 509, 1384, 1592
BslI	CCNNNNNNNGG	8 cut(s)	349, 493, 553, 981, 1422, 1452, 1491, 1649
BsmAI	GTCTC	7 cut(s)	38, 63, 103, 425, 960, 1126, 1336
BsmBI	CGTCTC	1 cut(s)	1336
BsmFI	GGGAC	4 cut(s)	58, 509, 1384, 1592
BsmI	GAATGC	1 cut(s)	1472
Bso31I	GGTCTC	3 cut(s)	63, 425, 960
BsoBI	CYCGRG	1 cut(s)	1333
Bsp119I	TTCGAA	1 cut(s)	87
Bsp120I	GGGCCC	1 cut(s)	907
Bsp1286I	GDGCHC	9 cut(s)	63, 308, 618, 708, 737, 870, 911, 927, 1025
Bsp13I	TCCGGA	1 cut(s)	1513
Bsp143I	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
BspCNI	CTCAG	2 cut(s)	922, 1030
BspEI	TCCGGA	1 cut(s)	1513
BspFNI	CGCG	2 cut(s)	426, 1567
BspHI	TCATGA	1 cut(s)	1464
BspLI	GGNNCC	9 cut(s)	109, 127, 698, 736, 909, 936, 1024, 1134, 1640
BspMAI	CTGCAG	1 cut(s)	1320
BspPI	GGATC	8 cut(s)	120, 133, 360, 439, 665, 691, 704, 1269
BspQI	GCTCTTC	1 cut(s)	1304
BspT104I	TTCGAA	1 cut(s)	87
BspTNI	GGTCTC	3 cut(s)	63, 425, 960
BsrDI	GCAATG	1 cut(s)	516
BsrFI	RCCGGY	3 cut(s)	635, 872, 1193
BsrI	ACTGG	8 cut(s)	45, 126, 157, 449, 503, 540, 713, 760
BssAI	RCCGGY	3 cut(s)	635, 872, 1193
BssECI	CCNNGG	6 cut(s)	164, 1083, 1233, 1367, 1483, 1634
BssMI	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
BssNI	GRCGYC	2 cut(s)	570, 1413
BssSI	CACGAG	1 cut(s)	1304
BssT1I	CCWWGG	1 cut(s)	1233
Bst2BI	CACGAG	1 cut(s)	1304
Bst2UI	CCWGG	6 cut(s)	165, 224, 559, 1085, 1368, 1636
Bst4CI	ACNGT	7 cut(s)	484, 584, 745, 865, 891, 1037, 1552
Bst6I	CTCTTC	2 cut(s)	626, 1304
BstACI	GRCGYC	2 cut(s)	570, 1413
BstAPI	GCANNNNNTGC	1 cut(s)	22
BstBAI	YACGTR	1 cut(s)	756
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	5 cut(s)	637, 1097, 1155, 1316, 1424
BstDEI	CTNAG	3 cut(s)	930, 1017, 1528
BstF5I	GGATG	6 cut(s)	255, 595, 717, 842, 950, 1213
BstFNI	CGCG	2 cut(s)	426, 1567
BstH2I	RGCGCY	2 cut(s)	1525, 1605
BstHHI	GCGC	3 cut(s)	1524, 1567, 1604
BstKTI	GATC	7 cut(s)	128, 355, 447, 660, 699, 1264, 1290
BstMAI	GTCTC	7 cut(s)	38, 63, 103, 425, 960, 1126, 1336
BstMBI	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 407, 423, 1101, 1324, 1349
BstNI	CCWGG	6 cut(s)	165, 224, 559, 1085, 1368, 1636
BstNSI	RCATGY	1 cut(s)	1594
BstSCI	CCNGG	7 cut(s)	163, 222, 557, 1083, 1366, 1483, 1634
BstSFI	CTRYAG	1 cut(s)	1316
BstSLI	GKGCMC	3 cut(s)	63, 308, 911
BstUI	CGCG	2 cut(s)	426, 1567
BstV1I	GCAGC	7 cut(s)	9, 375, 693, 988, 1209, 1444, 1546
BstV2I	GAAGAC	1 cut(s)	1339
BstX2I	RGATCY	3 cut(s)	125, 657, 696
BstXI	CCANNNNNNTGG	5 cut(s)	164, 945, 1087, 1258, 1374
BstYI	RGATCY	3 cut(s)	125, 657, 696
BstZI	CGGCCG	1 cut(s)	544
Bsu36I	CCTNAGG	2 cut(s)	930, 1017
BsuI	GTATCC	1 cut(s)	1331
BtrI	CACGTC	3 cut(s)	772, 1225, 1330
BtsCI	GGATG	6 cut(s)	255, 595, 717, 842, 950, 1213
BtsI	GCAGTG	1 cut(s)	61
BtsIMutI	CAGTG	6 cut(s)	38, 61, 119, 440, 480, 706
Cac8I	GCNNGC	5 cut(s)	637, 1097, 1155, 1316, 1424
CciI	TCATGA	1 cut(s)	1464
CciNI	GCGGCCGC	1 cut(s)	544
CfoI	GCGC	3 cut(s)	1524, 1567, 1604
Cfr10I	RCCGGY	3 cut(s)	635, 872, 1193
Cfr13I	GGNCC	6 cut(s)	167, 907, 908, 934, 1132, 1638
CseI	GACGC	2 cut(s)	559, 1421
Csp6I	GTAC	5 cut(s)	321, 502, 757, 1441, 1585
CspAI	ACCGGT	1 cut(s)	872
CviQI	GTAC	5 cut(s)	321, 502, 757, 1441, 1585
DdeI	CTNAG	3 cut(s)	930, 1017, 1528
DpnI	GATC	7 cut(s)	127, 354, 446, 659, 698, 1263, 1289
DpnII	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
DrdI	GACNNNNNNGTC	1 cut(s)	482
DseDI	GACNNNNNNGTC	1 cut(s)	482
EaeI	YGGCCR	4 cut(s)	154, 544, 555, 792
EagI	CGGCCG	1 cut(s)	544
Eam1104I	CTCTTC	2 cut(s)	626, 1304
EarI	CTCTTC	2 cut(s)	626, 1304
Ecl136II	GAGCTC	1 cut(s)	925
EclXI	CGGCCG	1 cut(s)	544
Eco130I	CCWWGG	1 cut(s)	1233
Eco147I	AGGCCT	1 cut(s)	562
Eco24I	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
Eco31I	GGTCTC	3 cut(s)	63, 425, 960
Eco47I	GGWCC	1 cut(s)	1132
Eco52I	CGGCCG	1 cut(s)	544
Eco53kI	GAGCTC	1 cut(s)	925
Eco81I	CCTNAGG	2 cut(s)	930, 1017
Eco88I	CYCGRG	1 cut(s)	1333
EcoICRI	GAGCTC	1 cut(s)	925
EcoO109I	RGGNCCY	4 cut(s)	907, 908, 934, 1638
EcoRI	GAATTC	1 cut(s)	271
EcoRII	CCWGG	6 cut(s)	163, 222, 557, 1083, 1366, 1634
EcoT14I	CCWWGG	1 cut(s)	1233
EcoT22I	ATGCAT	2 cut(s)	18, 791
EcoT38I	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
ErhI	CCWWGG	1 cut(s)	1233
Esp3I	CGTCTC	1 cut(s)	1336
FalI	AAGNNNNNCTT	2 cut(s)	869, 901
FaqI	GGGAC	4 cut(s)	58, 509, 1384, 1592
FauI	CCCGC	3 cut(s)	322, 394, 1061
FokI	GGATG	6 cut(s)	242, 602, 724, 829, 957, 1220
FriOI	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
FspBI	CTAG	3 cut(s)	800, 996, 1005
GlaI	GCGC	3 cut(s)	1523, 1566, 1603
GsaI	CCCAGC	2 cut(s)	1220, 1609
HaeII	RGCGCY	2 cut(s)	1525, 1605
HapII	CCGG	7 cut(s)	467, 636, 873, 1194, 1382, 1485, 1514
HgaI	GACGC	2 cut(s)	559, 1421
HhaI	GCGC	3 cut(s)	1524, 1567, 1604
Hin1I	GRCGYC	2 cut(s)	570, 1413
Hin6I	GCGC	3 cut(s)	1522, 1565, 1602
HinP1I	GCGC	3 cut(s)	1522, 1565, 1602
HincII	GTYRAC	1 cut(s)	1072
HindII	GTYRAC	1 cut(s)	1072
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	4 cut(s)	852, 917, 985, 1119
HpaII	CCGG	7 cut(s)	467, 636, 873, 1194, 1382, 1485, 1514
HphI	GGTGA	8 cut(s)	217, 322, 616, 847, 862, 1042, 1187, 1540
Hpy166II	GTNNAC	8 cut(s)	61, 208, 440, 1072, 1090, 1132, 1228, 1441
Hpy188I	TCNGA	4 cut(s)	357, 922, 1169, 1507
Hpy188III	TCNNGA	7 cut(s)	6, 676, 1189, 1335, 1409, 1465, 1514
Hpy8I	GTNNAC	8 cut(s)	61, 208, 440, 1072, 1090, 1132, 1228, 1441
HpyAV	CCTTC	5 cut(s)	343, 625, 935, 985, 1415
HpyCH4III	ACNGT	7 cut(s)	484, 584, 745, 865, 891, 1037, 1552
HpyCH4IV	ACGT	7 cut(s)	198, 210, 755, 771, 1224, 1254, 1329
HpyCH4V	TGCA	9 cut(s)	16, 61, 394, 410, 593, 663, 775, 789, 1318
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 407, 423, 1101, 1324, 1349
HpyF3I	CTNAG	3 cut(s)	930, 1017, 1528
HpySE526I	ACGT	7 cut(s)	198, 210, 755, 771, 1224, 1254, 1329
Hsp92I	GRCGYC	2 cut(s)	570, 1413
HspAI	GCGC	3 cut(s)	1522, 1565, 1602
Kpn2I	TCCGGA	1 cut(s)	1513
KroI	GCCGGC	1 cut(s)	635
KroNI	GCCGGC	1 cut(s)	637
Kzo9I	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
LguI	GCTCTTC	1 cut(s)	1304
LmnI	GCTCC	3 cut(s)	740, 930, 1028
Lsp1109I	GCAGC	7 cut(s)	9, 375, 693, 988, 1209, 1444, 1546
LweI	GCATC	9 cut(s)	3, 25, 264, 580, 784, 851, 891, 1209, 1626
MaeI	CTAG	3 cut(s)	800, 996, 1005
MaeII	ACGT	7 cut(s)	198, 210, 755, 771, 1224, 1254, 1329
MaeIII	GTNAC	4 cut(s)	762, 802, 1175, 1546
MalI	GATC	7 cut(s)	127, 354, 446, 659, 698, 1263, 1289
MboI	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
MboII	GAAGA	5 cut(s)	76, 280, 613, 1321, 1339
MflI	RGATCY	3 cut(s)	125, 657, 696
MhlI	GDGCHC	9 cut(s)	63, 308, 618, 708, 737, 870, 911, 927, 1025
MlsI	TGGCCA	2 cut(s)	156, 557
MluCI	AATT	5 cut(s)	48, 178, 271, 965, 1628
MluNI	TGGCCA	2 cut(s)	156, 557
MlyI	GAGTC	2 cut(s)	911, 1128
MmeI	TCCRAC	2 cut(s)	404, 962
Mox20I	TGGCCA	2 cut(s)	156, 557
Mph1103I	ATGCAT	2 cut(s)	18, 791
MroI	TCCGGA	1 cut(s)	1513
MroNI	GCCGGC	1 cut(s)	635
MroXI	GAANNNNTTC	1 cut(s)	212
MscI	TGGCCA	2 cut(s)	156, 557
MseI	TTAA	3 cut(s)	687, 1044, 1623
MslI	CAYNNNNRTG	2 cut(s)	794, 1085
Msp20I	TGGCCA	2 cut(s)	156, 557
MspA1I	CMGCKG	3 cut(s)	317, 543, 1220
MspI	CCGG	7 cut(s)	467, 636, 873, 1194, 1382, 1485, 1514
MspR9I	CCNGG	7 cut(s)	165, 224, 559, 1085, 1368, 1485, 1636
Mva1269I	GAATGC	1 cut(s)	1472
MvaI	CCWGG	6 cut(s)	165, 224, 559, 1085, 1368, 1636
MvnI	CGCG	2 cut(s)	426, 1567
MwoI	GCNNNNNNNGC	6 cut(s)	22, 407, 423, 1101, 1324, 1349
NaeI	GCCGGC	1 cut(s)	637
NciI	CCSGG	1 cut(s)	1485
NdeII	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
NgoMIV	GCCGGC	1 cut(s)	635
NlaIV	GGNNCC	9 cut(s)	109, 127, 698, 736, 909, 936, 1024, 1134, 1640
NmuCI	GTSAC	4 cut(s)	762, 802, 1175, 1546
NotI	GCGGCCGC	1 cut(s)	544
NsiI	ATGCAT	2 cut(s)	18, 791
NspI	RCATGY	1 cut(s)	1594
NspV	TTCGAA	1 cut(s)	87
OliI	CACNNNNGTG	1 cut(s)	1085
PagI	TCATGA	1 cut(s)	1464
PceI	AGGCCT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1304
PctI	GAATGC	1 cut(s)	1472
PdiI	GCCGGC	1 cut(s)	637
PdmI	GAANNNNTTC	1 cut(s)	212
PfeI	GAWTC	2 cut(s)	852, 985
PflFI	GACNNNGTC	1 cut(s)	569
PflMI	CCANNNNNTGG	1 cut(s)	1452
PinAI	ACCGGT	1 cut(s)	872
PleI	GAGTC	2 cut(s)	911, 1127
PpsI	GAGTC	2 cut(s)	911, 1127
Ppu21I	YACGTR	1 cut(s)	756
Psp124BI	GAGCTC	1 cut(s)	927
Psp1406I	AACGTT	1 cut(s)	1254
Psp6I	CCWGG	6 cut(s)	163, 222, 557, 1083, 1366, 1634
PspFI	CCCAGC	2 cut(s)	1216, 1605
PspGI	CCWGG	6 cut(s)	163, 222, 557, 1083, 1366, 1634
PspN4I	GGNNCC	9 cut(s)	109, 127, 698, 736, 909, 936, 1024, 1134, 1640
PspOMI	GGGCCC	1 cut(s)	907
PspPI	GGNCC	6 cut(s)	167, 907, 908, 934, 1132, 1638
PstI	CTGCAG	1 cut(s)	1320
PsuI	RGATCY	3 cut(s)	125, 657, 696
PsyI	GACNNNGTC	1 cut(s)	569
PvuII	CAGCTG	1 cut(s)	1220
RsaI	GTAC	5 cut(s)	322, 503, 758, 1442, 1586
RsaNI	GTAC	5 cut(s)	321, 502, 757, 1441, 1585
RseI	CAYNNNNRTG	2 cut(s)	794, 1085
SacI	GAGCTC	1 cut(s)	927
SapI	GCTCTTC	1 cut(s)	1304
SaqAI	TTAA	3 cut(s)	687, 1044, 1623
Sau3AI	GATC	7 cut(s)	125, 352, 444, 657, 696, 1261, 1287
Sau96I	GGNCC	6 cut(s)	167, 907, 908, 934, 1132, 1638
SchI	GAGTC	2 cut(s)	911, 1128
ScrFI	CCNGG	7 cut(s)	165, 224, 559, 1085, 1368, 1485, 1636
SduI	GDGCHC	9 cut(s)	63, 308, 618, 708, 737, 870, 911, 927, 1025
SfaNI	GCATC	9 cut(s)	3, 25, 264, 580, 784, 851, 891, 1209, 1626
SfcI	CTRYAG	1 cut(s)	1316
SfuI	TTCGAA	1 cut(s)	87
SinI	GGWCC	1 cut(s)	1132
SmiMI	CAYNNNNRTG	2 cut(s)	794, 1085
SmlI	CTYRAG	2 cut(s)	524, 1148
SmoI	CTYRAG	2 cut(s)	524, 1148
Sse9I	AATT	5 cut(s)	48, 178, 271, 965, 1628
SseBI	AGGCCT	1 cut(s)	562
SspI	AATATT	1 cut(s)	1498
SspMI	CTAG	3 cut(s)	800, 996, 1005
SstI	GAGCTC	1 cut(s)	927
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	7 cut(s)	163, 222, 557, 1083, 1366, 1483, 1634
StyI	CCWWGG	1 cut(s)	1233
TaaI	ACNGT	7 cut(s)	484, 584, 745, 865, 891, 1037, 1552
TaiI	ACGT	7 cut(s)	201, 213, 758, 774, 1227, 1257, 1332
TaqI	TCGA	3 cut(s)	87, 1362, 1476
TaqII	GACCGA	1 cut(s)	770
TasI	AATT	5 cut(s)	48, 178, 271, 965, 1628
TatI	WGTACW	1 cut(s)	1584
TauI	GCSGC	4 cut(s)	546, 549, 1079, 1617
TfiI	GAWTC	2 cut(s)	852, 985
Tru1I	TTAA	3 cut(s)	687, 1044, 1623
Tru9I	TTAA	3 cut(s)	687, 1044, 1623
TscAI	CASTG	6 cut(s)	45, 68, 126, 447, 487, 713
TseFI	GTSAC	4 cut(s)	762, 802, 1175, 1546
TseI	GCWGC	7 cut(s)	22, 363, 681, 1001, 1197, 1457, 1534
Tsp45I	GTSAC	4 cut(s)	762, 802, 1175, 1546
TspDTI	ATGAA	4 cut(s)	264, 644, 909, 1076
TspGWI	ACGGA	5 cut(s)	120, 300, 959, 968, 1131
TspRI	CASTG	6 cut(s)	45, 68, 126, 447, 487, 713
Tth111I	GACNNNGTC	1 cut(s)	569
Van91I	CCANNNNNTGG	1 cut(s)	1452
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	1 cut(s)	1132
XapI	RAATTY	1 cut(s)	271
XceI	RCATGY	1 cut(s)	1594
XmnI	GAANNNNTTC	1 cut(s)	212
XspI	CTAG	3 cut(s)	800, 996, 1005
Zsp2I	ATGCAT	2 cut(s)	18, 791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.