Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Reverse (-)

93021726 .. 93026055

Gene Structure 4330 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG542100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGAGTCCATCATTTCATTTTGTAATTCACTATATATAAGCCAGGTAACTAATATTAATGAATTGGTTGCATGTATGCAGGAGTGGTATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACCTGGAACTATGTGCCCCATACCCGCGGGGCAGGCGGTGCATTCGGCGGTCTCCGCGTGAATAGTCGTCTAATGATCCCAGTTCCTTATGATACTCCGGAGGATGACTACACTGTCCTCATCGGGGACTGGTACACCAAAAGCCACAACGCTGTGAAGAAACTACTTGACAGCGGTCGCAGTATGGCCAGGCCTGACGGTGTCCTCATCAACGGTAAAGATGCAAAGGGCGACGGTAAAGACGAGCCCCTCTTCACCATGAAAGCCGGCAAGACCTACAAGTATAGGATTTGCAATGTAGGTCTTAAGAACACCCTTAACTTTAGGATCCAAGAACACTGGATGACGTTAGTGGAGATGGAGGGCTCCCACACCGTCCAAAATACGTACCAGTCACTTGATGTGCATCTCGGGCAATGCATGGCGGTGCTAGTCACAGCTGACAAAGACCCCAAAGACTATTACATGGTAGCATCCACAAGATTCACCAAAAGCGTGCTCACCGGTAAGGGCATCATACGTTATGAAAATGGTAAGGGCCCTGCTGACCCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAATCTCACTTCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCACTACGGAAAGATTAACATCAGCCGCACCATCAGACTCGCCAACGCCGCATCCAAGGTGGATGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTATGGAGTGGGTGACAAGGTGTTCAAGACTGACACCATCAAGGATGAACCCCCAGAGGACGAGACCAAGGTAGAGGTCCATCCCAATGTTGTGAATCAAACCCACAGAGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCCTCCAGACATGGCACGTGTCGGGATACGCCATCTTTGCCGTCGCCATCGAGCCAGGAAGATGGGACCCAGAAAAAAGGAAAAACTACAACCTTCTTGACGCTGTGAGCAGGCACACAATCCAAGTGTACCCCAAATCATGGGCTGCCATCATGACCTCATTTGACAACCCCGGAATGTGGAATATTAGGTCAGAACATCCGGAAAGGCGCTACCTAGGGCAACAACTCTATATCGCCGTTCCTAATCCTAGCCATTCTACAAGGGACGAGTACAATATGCCAGACACCGCCCTGGTCTGCGGCATCGTCAAGGACATGCCCAAGCCGCCCCCACCTTACCGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

470

Amino Acids

53.45

Weight (kDa)

6.93

Isoelectric Point (pI)

38.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase	PF00394	76 - 218	1.3e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	299 - 438	1.1e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	236
AccB7I	CCANNNNNTGG	1 cut(s)	1203
AccBSI	CCGCTC	1 cut(s)	726
AccII	CGCG	2 cut(s)	150, 180
AccIII	TCCGGA	2 cut(s)	220, 1264
AclWI	GGATC	3 cut(s)	193, 445, 458
AcoI	YGGCCR	1 cut(s)	309
AcsI	RAATTY	1 cut(s)	104
AcvI	CACGTG	1 cut(s)	1081
AfaI	GTAC	4 cut(s)	257, 512, 1193, 1337
AfiI	CCNNNNNNNGG	4 cut(s)	247, 735, 1203, 1242
AflII	CTTAAG	1 cut(s)	428
AflIII	ACRYGT	1 cut(s)	1080
AgeI	ACCGGT	1 cut(s)	626
AgsI	TTSAA	1 cut(s)	943
AjnI	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
AluBI	AGCT	4 cut(s)	563, 679, 853, 907
AluI	AGCT	4 cut(s)	563, 679, 853, 907
Alw21I	GWGCWC	2 cut(s)	624, 681
Alw26I	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
AlwI	GGATC	3 cut(s)	193, 445, 458
Ama87I	CYCGRG	2 cut(s)	533, 674
Aor13HI	TCCGGA	2 cut(s)	220, 1264
AoxI	GGCC	4 cut(s)	309, 314, 661, 687
ApaI	GGGCCC	1 cut(s)	665
ApeKI	GCWGC	2 cut(s)	755, 1208
ApoI	RAATTY	1 cut(s)	104
AseI	ATTAAT	1 cut(s)	57
AsiGI	ACCGGT	1 cut(s)	626
AspA2I	CCTAGG	1 cut(s)	1279
AspLEI	GCGC	1 cut(s)	1275
AspS9I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
AsuC2I	CCSGG	1 cut(s)	1236
AsuHPI	GGTGA	4 cut(s)	370, 601, 616, 941
AvaI	CYCGRG	2 cut(s)	533, 674
AvaII	GGWCC	3 cut(s)	886, 994, 1129
AvrII	CCTAGG	1 cut(s)	1279
AxyI	CCTNAGG	2 cut(s)	684, 771
BaeGI	GKGCMC	2 cut(s)	141, 665
BalI	TGGCCA	1 cut(s)	311
BamHI	GGATCC	1 cut(s)	450
BanII	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
BauI	CACGAG	1 cut(s)	1055
BbrPI	CACGTG	1 cut(s)	1081
Bbv12I	GWGCWC	2 cut(s)	624, 681
BbvI	GCAGC	2 cut(s)	742, 1195
BceAI	ACGGC	2 cut(s)	1088, 1286
BciT130I	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BciVI	GTATCC	2 cut(s)	99, 1082
BcnI	CCSGG	1 cut(s)	1236
BcoDI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BfaI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
BfoI	RGCGCY	1 cut(s)	1276
BfrI	CTTAAG	1 cut(s)	428
BfuI	GTATCC	2 cut(s)	99, 1082
BisI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
BlnI	CCTAGG	1 cut(s)	1279
BlsI	GCNGC	6 cut(s)	757, 809, 832, 1210, 1367, 1392
Bme1390I	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
Bme18I	GGWCC	3 cut(s)	886, 994, 1129
BmeT110I	CYCGRG	2 cut(s)	533, 674
BmgT120I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
BmiI	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
BmrFI	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
BmrI	ACTGGG	1 cut(s)	197
BmsI	GCATC	6 cut(s)	334, 538, 605, 645, 842, 1377
BmuI	ACTGGG	1 cut(s)	197
BoxI	GACNNNNGTC	1 cut(s)	297
BpmI	CTGGAG	1 cut(s)	1052
BpuEI	CTTGAG	1 cut(s)	887
BpuMI	CCSGG	1 cut(s)	1236
BsaAI	YACGTR	2 cut(s)	510, 1081
BsaBI	GATNNNNATC	2 cut(s)	528, 800
BsaI	GGTCTC	3 cut(s)	179, 714, 974
BsaJI	CCNNGG	6 cut(s)	148, 837, 984, 1234, 1279, 1356
BsaWI	WCCGGW	4 cut(s)	220, 626, 1264, 1404
BsaXI	ACNNNNNCTCC	2 cut(s)	860, 890
Bsc4I	CCNNNNNNNGG	4 cut(s)	247, 735, 1203, 1242
Bse118I	RCCGGY	2 cut(s)	389, 626
Bse1I	ACTGG	5 cut(s)	203, 257, 467, 514, 718
Bse21I	CCTNAGG	2 cut(s)	684, 771
Bse3DI	GCAATG	2 cut(s)	424, 545
Bse8I	GATNNNNATC	2 cut(s)	528, 800
BseAI	TCCGGA	2 cut(s)	220, 1264
BseBI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BseDI	CCNNGG	6 cut(s)	148, 837, 984, 1234, 1279, 1356
BseGI	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BseJI	GATNNNNATC	2 cut(s)	528, 800
BseLI	CCNNNNNNNGG	4 cut(s)	247, 735, 1203, 1242
BseMI	GCAATG	2 cut(s)	424, 545
BseMII	CTCAG	2 cut(s)	675, 785
BseNI	ACTGG	5 cut(s)	203, 257, 467, 514, 718
BseSI	GKGCMC	2 cut(s)	141, 665
BseXI	GCAGC	2 cut(s)	742, 1195
Bsh1236I	CGCG	2 cut(s)	150, 180
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	4 cut(s)	311, 316, 663, 689
BshTI	ACCGGT	1 cut(s)	626
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	624, 681
BsiHKCI	CYCGRG	2 cut(s)	533, 674
BsiSI	CCGG	6 cut(s)	221, 390, 627, 1236, 1265, 1405
BslFI	GGGAC	3 cut(s)	263, 1142, 1343
BslI	CCNNNNNNNGG	4 cut(s)	247, 735, 1203, 1242
BsmAI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BsmFI	GGGAC	3 cut(s)	263, 1142, 1343
BsmI	GAATGC	1 cut(s)	164
BsnI	GGCC	4 cut(s)	311, 316, 663, 689
Bso31I	GGTCTC	3 cut(s)	179, 714, 974
BsoBI	CYCGRG	2 cut(s)	533, 674
Bsp120I	GGGCCC	1 cut(s)	661
Bsp1286I	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
Bsp13I	TCCGGA	2 cut(s)	220, 1264
Bsp143I	GATC	2 cut(s)	198, 450
BspANI	GGCC	4 cut(s)	311, 316, 663, 689
BspCNI	CTCAG	2 cut(s)	676, 784
BspEI	TCCGGA	2 cut(s)	220, 1264
BspFNI	CGCG	2 cut(s)	150, 180
BspHI	TCATGA	1 cut(s)	1215
BspLI	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
BspPI	GGATC	3 cut(s)	193, 445, 458
BspQI	GCTCTTC	1 cut(s)	1055
BspTI	CTTAAG	1 cut(s)	428
BspTNI	GGTCTC	3 cut(s)	179, 714, 974
BsrBI	CCGCTC	1 cut(s)	726
BsrDI	GCAATG	2 cut(s)	424, 545
BsrFI	RCCGGY	2 cut(s)	389, 626
BsrI	ACTGG	5 cut(s)	203, 257, 467, 514, 718
BssAI	RCCGGY	2 cut(s)	389, 626
BssECI	CCNNGG	6 cut(s)	148, 837, 984, 1234, 1279, 1356
BssMI	GATC	2 cut(s)	198, 450
BssSI	CACGAG	1 cut(s)	1055
BssT1I	CCWWGG	3 cut(s)	837, 984, 1279
Bst2BI	CACGAG	1 cut(s)	1055
Bst2UI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
Bst4CI	ACNGT	5 cut(s)	238, 323, 338, 359, 499
Bst6I	CTCTTC	2 cut(s)	380, 1055
BstAFI	CTTAAG	1 cut(s)	428
BstAPI	GCANNNNNTGC	1 cut(s)	161
BstBAI	YACGTR	2 cut(s)	510, 1081
BstC8I	GCNNGC	6 cut(s)	157, 391, 620, 851, 909, 1175
BstDEI	CTNAG	2 cut(s)	684, 771
BstDSI	CCRYGG	1 cut(s)	148
BstF5I	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BstFNI	CGCG	2 cut(s)	150, 180
BstH2I	RGCGCY	1 cut(s)	1276
BstHHI	GCGC	1 cut(s)	1275
BstKTI	GATC	2 cut(s)	201, 453
BstMAI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BstMBI	GATC	2 cut(s)	198, 450
BstMCI	CGRYCG	1 cut(s)	301
BstMWI	GCNNNNNNNGC	8 cut(s)	156, 161, 177, 535, 830, 855, 1100, 1390
BstNI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BstNSI	RCATGY	2 cut(s)	75, 1384
BstPAI	GACNNNNGTC	1 cut(s)	297
BstSCI	CCNGG	6 cut(s)	42, 125, 311, 1117, 1234, 1356
BstSLI	GKGCMC	2 cut(s)	141, 665
BstSNI	TACGTA	1 cut(s)	510
BstUI	CGCG	2 cut(s)	150, 180
BstV1I	GCAGC	2 cut(s)	742, 1195
BstX2I	RGATCY	1 cut(s)	450
BstXI	CCANNNNNNTGG	2 cut(s)	699, 1125
BstYI	RGATCY	1 cut(s)	450
Bsu36I	CCTNAGG	2 cut(s)	684, 771
BsuI	GTATCC	2 cut(s)	99, 1082
BsuRI	GGCC	4 cut(s)	311, 316, 663, 689
BtgI	CCRYGG	1 cut(s)	148
BtsCI	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BtsIMutI	CAGTG	2 cut(s)	234, 460
Cac8I	GCNNGC	6 cut(s)	157, 391, 620, 851, 909, 1175
CciI	TCATGA	1 cut(s)	1215
CfoI	GCGC	1 cut(s)	1275
Cfr10I	RCCGGY	2 cut(s)	389, 626
Cfr13I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
Cfr42I	CCGCGG	1 cut(s)	151
CseI	GACGC	1 cut(s)	1172
Csp6I	GTAC	4 cut(s)	256, 511, 1192, 1336
CspAI	ACCGGT	1 cut(s)	626
CviQI	GTAC	4 cut(s)	256, 511, 1192, 1336
DdeI	CTNAG	2 cut(s)	684, 771
DpnI	GATC	2 cut(s)	200, 452
DpnII	GATC	2 cut(s)	198, 450
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	1 cut(s)	309
Eam1104I	CTCTTC	2 cut(s)	380, 1055
EarI	CTCTTC	2 cut(s)	380, 1055
Ecl136II	GAGCTC	1 cut(s)	679
Eco105I	TACGTA	1 cut(s)	510
Eco130I	CCWWGG	3 cut(s)	837, 984, 1279
Eco147I	AGGCCT	1 cut(s)	316
Eco24I	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
Eco31I	GGTCTC	3 cut(s)	179, 714, 974
Eco47I	GGWCC	3 cut(s)	886, 994, 1129
Eco53kI	GAGCTC	1 cut(s)	679
Eco72I	CACGTG	1 cut(s)	1081
Eco81I	CCTNAGG	2 cut(s)	684, 771
Eco88I	CYCGRG	2 cut(s)	533, 674
EcoICRI	GAGCTC	1 cut(s)	679
EcoO109I	RGGNCCY	4 cut(s)	661, 662, 688, 1129
EcoRI	GAATTC	1 cut(s)	104
EcoRII	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
EcoT14I	CCWWGG	3 cut(s)	837, 984, 1279
EcoT22I	ATGCAT	1 cut(s)	545
EcoT38I	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
ErhI	CCWWGG	3 cut(s)	837, 984, 1279
FaqI	GGGAC	3 cut(s)	263, 1142, 1343
FauI	CCCGC	2 cut(s)	143, 155
Fnu4HI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
FokI	GGATG	9 cut(s)	239, 478, 583, 711, 820, 857, 974, 984, 1248
FriOI	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
Fsp4HI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
FspBI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
GlaI	GCGC	1 cut(s)	1274
GluI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
GsuI	CTGGAG	1 cut(s)	1052
HaeII	RGCGCY	1 cut(s)	1276
HaeIII	GGCC	4 cut(s)	311, 316, 663, 689
HapII	CCGG	6 cut(s)	221, 390, 627, 1236, 1265, 1405
HgaI	GACGC	1 cut(s)	1172
HhaI	GCGC	1 cut(s)	1275
Hin6I	GCGC	1 cut(s)	1273
HinP1I	GCGC	1 cut(s)	1273
HindIII	AAGCTT	1 cut(s)	905
HinfI	GANTC	6 cut(s)	5, 606, 739, 819, 873, 1012
HpaII	CCGG	6 cut(s)	221, 390, 627, 1236, 1265, 1405
HphI	GGTGA	4 cut(s)	370, 601, 616, 941
Hpy166II	GTNNAC	3 cut(s)	258, 886, 1192
Hpy188I	TCNGA	2 cut(s)	818, 1258
Hpy188III	TCNNGA	7 cut(s)	221, 943, 1069, 1086, 1160, 1216, 1265
Hpy8I	GTNNAC	3 cut(s)	258, 886, 1192
Hpy99I	CGWCG	2 cut(s)	359, 1109
HpyAV	CCTTC	3 cut(s)	689, 739, 1166
HpyCH4III	ACNGT	5 cut(s)	238, 323, 338, 359, 499
HpyCH4IV	ACGT	4 cut(s)	470, 509, 643, 1080
HpyCH4V	TGCA	7 cut(s)	71, 79, 164, 347, 417, 529, 543
HpyF10VI	GCNNNNNNNGC	8 cut(s)	156, 161, 177, 535, 830, 855, 1100, 1390
HpyF3I	CTNAG	2 cut(s)	684, 771
HpySE526I	ACGT	4 cut(s)	470, 509, 643, 1080
HspAI	GCGC	1 cut(s)	1273
KflI	GGGWCCC	1 cut(s)	1129
Kpn2I	TCCGGA	2 cut(s)	220, 1264
KroI	GCCGGC	1 cut(s)	389
KroNI	GCCGGC	1 cut(s)	391
KspI	CCGCGG	1 cut(s)	151
Kzo9I	GATC	2 cut(s)	198, 450
LguI	GCTCTTC	1 cut(s)	1055
LmnI	GCTCC	4 cut(s)	494, 684, 731, 782
Lsp1109I	GCAGC	2 cut(s)	742, 1195
LweI	GCATC	6 cut(s)	334, 538, 605, 645, 842, 1377
MaeI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
MaeII	ACGT	4 cut(s)	470, 509, 643, 1080
MaeIII	GTNAC	4 cut(s)	46, 516, 556, 929
MalI	GATC	2 cut(s)	200, 452
MbiI	CCGCTC	1 cut(s)	726
MboI	GATC	2 cut(s)	198, 450
MboII	GAAGA	5 cut(s)	113, 292, 367, 1072, 1134
MflI	RGATCY	1 cut(s)	450
MhlI	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
MlsI	TGGCCA	1 cut(s)	311
MluCI	AATT	3 cut(s)	25, 62, 104
MluNI	TGGCCA	1 cut(s)	311
MlyI	GAGTC	3 cut(s)	14, 813, 882
MmeI	TCCRAC	1 cut(s)	716
Mox20I	TGGCCA	1 cut(s)	311
Mph1103I	ATGCAT	1 cut(s)	545
MroI	TCCGGA	2 cut(s)	220, 1264
MroNI	GCCGGC	1 cut(s)	389
MscI	TGGCCA	1 cut(s)	311
MseI	TTAA	5 cut(s)	57, 429, 441, 714, 798
MslI	CAYNNNNRTG	2 cut(s)	548, 1002
Msp20I	TGGCCA	1 cut(s)	311
MspA1I	CMGCKG	3 cut(s)	150, 297, 563
MspCI	CTTAAG	1 cut(s)	428
MspI	CCGG	6 cut(s)	221, 390, 627, 1236, 1265, 1405
MspR9I	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
Mva1269I	GAATGC	1 cut(s)	164
MvaI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
MvnI	CGCG	2 cut(s)	150, 180
MwoI	GCNNNNNNNGC	8 cut(s)	156, 161, 177, 535, 830, 855, 1100, 1390
NaeI	GCCGGC	1 cut(s)	391
NciI	CCSGG	1 cut(s)	1236
NdeII	GATC	2 cut(s)	198, 450
NgoMIV	GCCGGC	1 cut(s)	389
NlaIV	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
NmuCI	GTSAC	3 cut(s)	516, 556, 929
NsiI	ATGCAT	1 cut(s)	545
NspI	RCATGY	2 cut(s)	75, 1384
PagI	TCATGA	1 cut(s)	1215
PceI	AGGCCT	1 cut(s)	316
PciSI	GCTCTTC	1 cut(s)	1055
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PctI	GAATGC	1 cut(s)	164
PdiI	GCCGGC	1 cut(s)	391
PfeI	GAWTC	3 cut(s)	606, 739, 1012
PflFI	GACNNNGTC	1 cut(s)	323
PflMI	CCANNNNNTGG	1 cut(s)	1203
PinAI	ACCGGT	1 cut(s)	626
PkrI	GCNGC	6 cut(s)	757, 809, 832, 1210, 1367, 1392
PleI	GAGTC	3 cut(s)	13, 813, 881
PmaCI	CACGTG	1 cut(s)	1081
PmlI	CACGTG	1 cut(s)	1081
PpsI	GAGTC	3 cut(s)	13, 813, 881
Ppu21I	YACGTR	2 cut(s)	510, 1081
PpuMI	RGGWCCY	1 cut(s)	1129
PshAI	GACNNNNGTC	1 cut(s)	297
PshBI	ATTAAT	1 cut(s)	57
Psp124BI	GAGCTC	1 cut(s)	681
Psp5II	RGGWCCY	1 cut(s)	1129
Psp6I	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
PspCI	CACGTG	1 cut(s)	1081
PspGI	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
PspN4I	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
PspOMI	GGGCCC	1 cut(s)	661
PspPI	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
PspPPI	RGGWCCY	1 cut(s)	1129
PsuI	RGATCY	1 cut(s)	450
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	1 cut(s)	563
RsaI	GTAC	4 cut(s)	257, 512, 1193, 1337
RsaNI	GTAC	4 cut(s)	256, 511, 1192, 1336
RseI	CAYNNNNRTG	2 cut(s)	548, 1002
SacI	GAGCTC	1 cut(s)	681
SacII	CCGCGG	1 cut(s)	151
SapI	GCTCTTC	1 cut(s)	1055
SaqAI	TTAA	5 cut(s)	57, 429, 441, 714, 798
SatI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
Sau3AI	GATC	2 cut(s)	198, 450
Sau96I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
SchI	GAGTC	3 cut(s)	14, 813, 882
ScrFI	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
SduI	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
SfaNI	GCATC	6 cut(s)	334, 538, 605, 645, 842, 1377
Sfr303I	CCGCGG	1 cut(s)	151
SgrBI	CCGCGG	1 cut(s)	151
SinI	GGWCC	3 cut(s)	886, 994, 1129
SmiMI	CAYNNNNRTG	2 cut(s)	548, 1002
SmlI	CTYRAG	2 cut(s)	428, 902
SmoI	CTYRAG	2 cut(s)	428, 902
SnaBI	TACGTA	1 cut(s)	510
Sse9I	AATT	3 cut(s)	25, 62, 104
SseBI	AGGCCT	1 cut(s)	316
SspI	AATATT	2 cut(s)	55, 1249
SspMI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
SstI	GAGCTC	1 cut(s)	681
StuI	AGGCCT	1 cut(s)	316
StyD4I	CCNGG	6 cut(s)	42, 125, 311, 1117, 1234, 1356
StyI	CCWWGG	3 cut(s)	837, 984, 1279
TaaI	ACNGT	5 cut(s)	238, 323, 338, 359, 499
TaiI	ACGT	4 cut(s)	473, 512, 646, 1083
TaqI	TCGA	1 cut(s)	1113
TasI	AATT	3 cut(s)	25, 62, 104
TatI	WGTACW	1 cut(s)	1335
TauI	GCSGC	4 cut(s)	810, 833, 1368, 1393
TfiI	GAWTC	3 cut(s)	606, 739, 1012
Tru1I	TTAA	5 cut(s)	57, 429, 441, 714, 798
Tru9I	TTAA	5 cut(s)	57, 429, 441, 714, 798
TscAI	CASTG	2 cut(s)	241, 467
TseFI	GTSAC	3 cut(s)	516, 556, 929
TseI	GCWGC	2 cut(s)	755, 1208
Tsp45I	GTSAC	3 cut(s)	516, 556, 929
TspDTI	ATGAA	6 cut(s)	6, 75, 97, 398, 663, 978
TspGWI	ACGGA	4 cut(s)	133, 722, 804, 885
TspRI	CASTG	2 cut(s)	241, 467
Tth111I	GACNNNGTC	1 cut(s)	323
Van91I	CCANNNNNTGG	1 cut(s)	1203
Vha464I	CTTAAG	1 cut(s)	428
VpaK11BI	GGWCC	3 cut(s)	886, 994, 1129
VspI	ATTAAT	1 cut(s)	57
XapI	RAATTY	1 cut(s)	104
XceI	RCATGY	2 cut(s)	75, 1384
XmaJI	CCTAGG	1 cut(s)	1279
XspI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
Zsp2I	ATGCAT	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.