Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Reverse (-)

88361780 .. 88364111

Gene Structure 2332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG576100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGAGTCCATCATTTCATTTTGTAATTCACTATATATAAGCCAGGTAACTAATATTAATGAATTGGTTGCATATATGCAGGAGTGGTATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACCTGGAACTATGTGCCCCATACCTGCGGGGCTGGCGGTGCATTCGGCGGTCTCCGCGTGAATAGTCGTCTAATGATCCCAGTTCCTTATGATACTCCGGAGGATGACTACACTGTCCTCATCGGGGACTGGTACACCAAAAGCCACAACGCTGTCAAGAAACTACTTGACAGCGGTCGCAGTATGGCCAGGCCTGACGGTGTCCTCATCAACGGTAAAGATGCAAAGGGCGACGGTAAAGACGAGCCCCTCTTCACCATGAAAGCCGGCAAGACCTACAAGTATAGGATTTGCAATGTAGGTCTTAAGAACACCCTTAACTTTAGGATCCAAGAACACTGGATGACGTTAGTGGAGATGGAGGGCTCCCACACCGTCCAAAATACGTACCAGTCACTTGATGTGCATCTCGGGCAATGCATGGCGGTGCTAGTCACAGCTGACAAAGACCCCAAAGACTATTACATGGTAGCATCCACAAGATTCACCAAAAGCGTGCTCACCGGTAAGGGCATCATACGTTATGAAAATGGTAAGGGCCCTGCTGACCCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAATCTCACTGCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCACTACGGAAAGATTAACATCAGCCGCACCATCAGACTCGCCAACGCCGCATCCAAGGTGGATGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTATGGAGTGGGTGACAAGGTGTTCAAGACTGACACCATCAAGGATGAACCCCCAGAGGACGAGACCAAGGTAGAGGTCCATCCCAATGTTGTGAATCAAACCCACAGAGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCCTCCAGACATGGCACGTGTCGGGATACGCCATCTTTGCCGTCGCCATCGAGCCAGGGAGATGGGACCCAGAAAAAAGGAAAAACTACAACCTTCTTGACGCTGTGAGCAGGCACACAATCCAAGTGTACCCCAAATCATGGGCTGCCATCATGACCTCATTCGACAACCCCGGAATGTGGAATATTAGGTCAGAACATCCGGAAAGGCGCTACCTAGGGCAACAACTCTATATCGCCGTTCCTAATCCTAGCCGTTCTACAAGGGACGAGTACAATATGCCAGACACCGCCCTGGTCTGCGGCCTCGTTAAGAACATGCCCAAGCCGCCCCCACCTTACGGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

470

Amino Acids

53.36

Weight (kDa)

6.9

Isoelectric Point (pI)

38.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase	PF00394	76 - 218	1.3e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	299 - 438	1e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	236
Acc36I	ACCTGC	1 cut(s)	155
AccB7I	CCANNNNNTGG	1 cut(s)	1203
AccBSI	CCGCTC	1 cut(s)	726
AccII	CGCG	1 cut(s)	180
AccIII	TCCGGA	2 cut(s)	220, 1264
AclWI	GGATC	3 cut(s)	193, 445, 458
AcoI	YGGCCR	1 cut(s)	309
AcsI	RAATTY	1 cut(s)	104
AcvI	CACGTG	1 cut(s)	1081
AfaI	GTAC	4 cut(s)	257, 512, 1193, 1337
AfiI	CCNNNNNNNGG	5 cut(s)	247, 735, 1203, 1242, 1403
AflII	CTTAAG	1 cut(s)	428
AflIII	ACRYGT	1 cut(s)	1080
AgeI	ACCGGT	1 cut(s)	626
AgsI	TTSAA	1 cut(s)	943
AjnI	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
AluBI	AGCT	4 cut(s)	563, 679, 853, 907
AluI	AGCT	4 cut(s)	563, 679, 853, 907
Alw21I	GWGCWC	2 cut(s)	624, 681
Alw26I	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
AlwI	GGATC	3 cut(s)	193, 445, 458
Ama87I	CYCGRG	2 cut(s)	533, 674
Aor13HI	TCCGGA	2 cut(s)	220, 1264
AoxI	GGCC	5 cut(s)	309, 314, 661, 687, 1366
ApaI	GGGCCC	1 cut(s)	665
ApeKI	GCWGC	2 cut(s)	755, 1208
ApoI	RAATTY	1 cut(s)	104
AseI	ATTAAT	1 cut(s)	57
AsiGI	ACCGGT	1 cut(s)	626
AspA2I	CCTAGG	1 cut(s)	1279
AspLEI	GCGC	1 cut(s)	1275
AspS9I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
AsuC2I	CCSGG	1 cut(s)	1236
AsuHPI	GGTGA	4 cut(s)	370, 601, 616, 941
AvaI	CYCGRG	2 cut(s)	533, 674
AvaII	GGWCC	3 cut(s)	886, 994, 1129
AvrII	CCTAGG	1 cut(s)	1279
AxyI	CCTNAGG	2 cut(s)	684, 771
BaeGI	GKGCMC	2 cut(s)	141, 665
BalI	TGGCCA	1 cut(s)	311
BamHI	GGATCC	1 cut(s)	450
BanII	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
BauI	CACGAG	1 cut(s)	1055
BbrPI	CACGTG	1 cut(s)	1081
Bbv12I	GWGCWC	2 cut(s)	624, 681
BbvI	GCAGC	2 cut(s)	742, 1195
BceAI	ACGGC	3 cut(s)	1088, 1286, 1302
BciT130I	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BciVI	GTATCC	2 cut(s)	99, 1082
BcnI	CCSGG	1 cut(s)	1236
BcoDI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BfaI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
BfoI	RGCGCY	1 cut(s)	1276
BfrI	CTTAAG	1 cut(s)	428
BfuAI	ACCTGC	1 cut(s)	155
BfuI	GTATCC	2 cut(s)	99, 1082
BisI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
BlnI	CCTAGG	1 cut(s)	1279
BlsI	GCNGC	6 cut(s)	757, 809, 832, 1210, 1367, 1392
Bme1390I	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
Bme18I	GGWCC	3 cut(s)	886, 994, 1129
BmeT110I	CYCGRG	2 cut(s)	533, 674
BmgT120I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
BmiI	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
BmrFI	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
BmrI	ACTGGG	1 cut(s)	197
BmsI	GCATC	5 cut(s)	334, 538, 605, 645, 842
BmuI	ACTGGG	1 cut(s)	197
BoxI	GACNNNNGTC	1 cut(s)	297
BpmI	CTGGAG	1 cut(s)	1052
BpuEI	CTTGAG	1 cut(s)	887
BpuMI	CCSGG	1 cut(s)	1236
BsaAI	YACGTR	2 cut(s)	510, 1081
BsaBI	GATNNNNATC	2 cut(s)	528, 800
BsaI	GGTCTC	3 cut(s)	179, 714, 974
BsaJI	CCNNGG	6 cut(s)	837, 984, 1118, 1234, 1279, 1356
BsaWI	WCCGGW	3 cut(s)	220, 626, 1264
BsaXI	ACNNNNNCTCC	2 cut(s)	860, 890
Bsc4I	CCNNNNNNNGG	5 cut(s)	247, 735, 1203, 1242, 1403
Bse118I	RCCGGY	2 cut(s)	389, 626
Bse1I	ACTGG	5 cut(s)	203, 257, 467, 514, 718
Bse21I	CCTNAGG	2 cut(s)	684, 771
Bse3DI	GCAATG	2 cut(s)	424, 545
Bse8I	GATNNNNATC	2 cut(s)	528, 800
BseAI	TCCGGA	2 cut(s)	220, 1264
BseBI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BseDI	CCNNGG	6 cut(s)	837, 984, 1118, 1234, 1279, 1356
BseGI	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BseJI	GATNNNNATC	2 cut(s)	528, 800
BseLI	CCNNNNNNNGG	5 cut(s)	247, 735, 1203, 1242, 1403
BseMI	GCAATG	2 cut(s)	424, 545
BseMII	CTCAG	2 cut(s)	675, 785
BseNI	ACTGG	5 cut(s)	203, 257, 467, 514, 718
BseSI	GKGCMC	2 cut(s)	141, 665
BseXI	GCAGC	2 cut(s)	742, 1195
Bsh1236I	CGCG	1 cut(s)	180
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	5 cut(s)	311, 316, 663, 689, 1368
BshTI	ACCGGT	1 cut(s)	626
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	624, 681
BsiHKCI	CYCGRG	2 cut(s)	533, 674
BsiSI	CCGG	5 cut(s)	221, 390, 627, 1236, 1265
BslFI	GGGAC	3 cut(s)	263, 1142, 1343
BslI	CCNNNNNNNGG	5 cut(s)	247, 735, 1203, 1242, 1403
BsmAI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BsmFI	GGGAC	3 cut(s)	263, 1142, 1343
BsmI	GAATGC	1 cut(s)	164
BsnI	GGCC	5 cut(s)	311, 316, 663, 689, 1368
Bso31I	GGTCTC	3 cut(s)	179, 714, 974
BsoBI	CYCGRG	2 cut(s)	533, 674
Bsp120I	GGGCCC	1 cut(s)	661
Bsp1286I	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
Bsp13I	TCCGGA	2 cut(s)	220, 1264
Bsp143I	GATC	2 cut(s)	198, 450
BspANI	GGCC	5 cut(s)	311, 316, 663, 689, 1368
BspCNI	CTCAG	2 cut(s)	676, 784
BspEI	TCCGGA	2 cut(s)	220, 1264
BspFNI	CGCG	1 cut(s)	180
BspHI	TCATGA	1 cut(s)	1215
BspLI	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
BspMI	ACCTGC	1 cut(s)	155
BspPI	GGATC	3 cut(s)	193, 445, 458
BspQI	GCTCTTC	1 cut(s)	1055
BspTI	CTTAAG	1 cut(s)	428
BspTNI	GGTCTC	3 cut(s)	179, 714, 974
BsrBI	CCGCTC	1 cut(s)	726
BsrDI	GCAATG	2 cut(s)	424, 545
BsrFI	RCCGGY	2 cut(s)	389, 626
BsrI	ACTGG	5 cut(s)	203, 257, 467, 514, 718
BssAI	RCCGGY	2 cut(s)	389, 626
BssECI	CCNNGG	6 cut(s)	837, 984, 1118, 1234, 1279, 1356
BssMI	GATC	2 cut(s)	198, 450
BssSI	CACGAG	1 cut(s)	1055
BssT1I	CCWWGG	3 cut(s)	837, 984, 1279
Bst2BI	CACGAG	1 cut(s)	1055
Bst2UI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
Bst4CI	ACNGT	5 cut(s)	238, 323, 338, 359, 499
Bst6I	CTCTTC	2 cut(s)	380, 1055
BstAFI	CTTAAG	1 cut(s)	428
BstBAI	YACGTR	2 cut(s)	510, 1081
BstC8I	GCNNGC	6 cut(s)	157, 391, 620, 851, 909, 1175
BstDEI	CTNAG	2 cut(s)	684, 771
BstF5I	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BstFNI	CGCG	1 cut(s)	180
BstH2I	RGCGCY	1 cut(s)	1276
BstHHI	GCGC	1 cut(s)	1275
BstKTI	GATC	2 cut(s)	201, 453
BstMAI	GTCTC	5 cut(s)	179, 714, 880, 974, 1020
BstMBI	GATC	2 cut(s)	198, 450
BstMCI	CGRYCG	1 cut(s)	301
BstMWI	GCNNNNNNNGC	9 cut(s)	156, 161, 177, 535, 755, 830, 855, 1100, 1390
BstNI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
BstNSI	RCATGY	1 cut(s)	1384
BstPAI	GACNNNNGTC	1 cut(s)	297
BstSCI	CCNGG	6 cut(s)	42, 125, 311, 1117, 1234, 1356
BstSLI	GKGCMC	2 cut(s)	141, 665
BstSNI	TACGTA	1 cut(s)	510
BstUI	CGCG	1 cut(s)	180
BstV1I	GCAGC	2 cut(s)	742, 1195
BstX2I	RGATCY	1 cut(s)	450
BstXI	CCANNNNNNTGG	2 cut(s)	699, 1125
BstYI	RGATCY	1 cut(s)	450
Bsu36I	CCTNAGG	2 cut(s)	684, 771
BsuI	GTATCC	2 cut(s)	99, 1082
BsuRI	GGCC	5 cut(s)	311, 316, 663, 689, 1368
BtsCI	GGATG	9 cut(s)	232, 471, 596, 704, 833, 850, 967, 997, 1261
BtsI	GCAGTG	1 cut(s)	744
BtsIMutI	CAGTG	3 cut(s)	234, 460, 744
BveI	ACCTGC	1 cut(s)	155
Cac8I	GCNNGC	6 cut(s)	157, 391, 620, 851, 909, 1175
CciI	TCATGA	1 cut(s)	1215
CfoI	GCGC	1 cut(s)	1275
Cfr10I	RCCGGY	2 cut(s)	389, 626
Cfr13I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
CseI	GACGC	1 cut(s)	1172
Csp6I	GTAC	4 cut(s)	256, 511, 1192, 1336
CspAI	ACCGGT	1 cut(s)	626
CviQI	GTAC	4 cut(s)	256, 511, 1192, 1336
DdeI	CTNAG	2 cut(s)	684, 771
DpnI	GATC	2 cut(s)	200, 452
DpnII	GATC	2 cut(s)	198, 450
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	1 cut(s)	309
Eam1104I	CTCTTC	2 cut(s)	380, 1055
EarI	CTCTTC	2 cut(s)	380, 1055
Ecl136II	GAGCTC	1 cut(s)	679
Eco105I	TACGTA	1 cut(s)	510
Eco130I	CCWWGG	3 cut(s)	837, 984, 1279
Eco147I	AGGCCT	1 cut(s)	316
Eco24I	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
Eco31I	GGTCTC	3 cut(s)	179, 714, 974
Eco47I	GGWCC	3 cut(s)	886, 994, 1129
Eco53kI	GAGCTC	1 cut(s)	679
Eco72I	CACGTG	1 cut(s)	1081
Eco81I	CCTNAGG	2 cut(s)	684, 771
Eco88I	CYCGRG	2 cut(s)	533, 674
EcoICRI	GAGCTC	1 cut(s)	679
EcoO109I	RGGNCCY	4 cut(s)	661, 662, 688, 1129
EcoRI	GAATTC	1 cut(s)	104
EcoRII	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
EcoT14I	CCWWGG	3 cut(s)	837, 984, 1279
EcoT22I	ATGCAT	1 cut(s)	545
EcoT38I	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
ErhI	CCWWGG	3 cut(s)	837, 984, 1279
FaqI	GGGAC	3 cut(s)	263, 1142, 1343
FauI	CCCGC	1 cut(s)	143
Fnu4HI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
FokI	GGATG	9 cut(s)	239, 478, 583, 711, 820, 857, 974, 984, 1248
FriOI	GRGCYC	5 cut(s)	372, 491, 665, 681, 779
Fsp4HI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
FspBI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
GlaI	GCGC	1 cut(s)	1274
GluI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
GsuI	CTGGAG	1 cut(s)	1052
HaeII	RGCGCY	1 cut(s)	1276
HaeIII	GGCC	5 cut(s)	311, 316, 663, 689, 1368
HapII	CCGG	5 cut(s)	221, 390, 627, 1236, 1265
HgaI	GACGC	1 cut(s)	1172
HhaI	GCGC	1 cut(s)	1275
Hin6I	GCGC	1 cut(s)	1273
HinP1I	GCGC	1 cut(s)	1273
HindIII	AAGCTT	1 cut(s)	905
HinfI	GANTC	6 cut(s)	5, 606, 739, 819, 873, 1012
HpaII	CCGG	5 cut(s)	221, 390, 627, 1236, 1265
HphI	GGTGA	4 cut(s)	370, 601, 616, 941
Hpy166II	GTNNAC	3 cut(s)	258, 886, 1192
Hpy188I	TCNGA	2 cut(s)	818, 1258
Hpy188III	TCNNGA	8 cut(s)	221, 280, 943, 1069, 1086, 1160, 1216, 1265
Hpy8I	GTNNAC	3 cut(s)	258, 886, 1192
Hpy99I	CGWCG	2 cut(s)	359, 1109
HpyAV	CCTTC	3 cut(s)	689, 739, 1166
HpyCH4III	ACNGT	5 cut(s)	238, 323, 338, 359, 499
HpyCH4IV	ACGT	4 cut(s)	470, 509, 643, 1080
HpyCH4V	TGCA	7 cut(s)	71, 79, 164, 347, 417, 529, 543
HpyF10VI	GCNNNNNNNGC	9 cut(s)	156, 161, 177, 535, 755, 830, 855, 1100, 1390
HpyF3I	CTNAG	2 cut(s)	684, 771
HpySE526I	ACGT	4 cut(s)	470, 509, 643, 1080
HspAI	GCGC	1 cut(s)	1273
KflI	GGGWCCC	1 cut(s)	1129
Kpn2I	TCCGGA	2 cut(s)	220, 1264
KroI	GCCGGC	1 cut(s)	389
KroNI	GCCGGC	1 cut(s)	391
Kzo9I	GATC	2 cut(s)	198, 450
LguI	GCTCTTC	1 cut(s)	1055
LmnI	GCTCC	4 cut(s)	494, 684, 731, 782
Lsp1109I	GCAGC	2 cut(s)	742, 1195
LweI	GCATC	5 cut(s)	334, 538, 605, 645, 842
MaeI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
MaeII	ACGT	4 cut(s)	470, 509, 643, 1080
MaeIII	GTNAC	4 cut(s)	46, 516, 556, 929
MalI	GATC	2 cut(s)	200, 452
MbiI	CCGCTC	1 cut(s)	726
MboI	GATC	2 cut(s)	198, 450
MboII	GAAGA	3 cut(s)	113, 367, 1072
MflI	RGATCY	1 cut(s)	450
MhlI	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
MlsI	TGGCCA	1 cut(s)	311
MluCI	AATT	4 cut(s)	25, 62, 104, 1408
MluNI	TGGCCA	1 cut(s)	311
MlyI	GAGTC	3 cut(s)	14, 813, 882
MmeI	TCCRAC	1 cut(s)	716
Mox20I	TGGCCA	1 cut(s)	311
Mph1103I	ATGCAT	1 cut(s)	545
MroI	TCCGGA	2 cut(s)	220, 1264
MroNI	GCCGGC	1 cut(s)	389
MscI	TGGCCA	1 cut(s)	311
MseI	TTAA	7 cut(s)	57, 429, 441, 714, 798, 1374, 1411
MslI	CAYNNNNRTG	2 cut(s)	548, 1002
Msp20I	TGGCCA	1 cut(s)	311
MspA1I	CMGCKG	2 cut(s)	297, 563
MspCI	CTTAAG	1 cut(s)	428
MspI	CCGG	5 cut(s)	221, 390, 627, 1236, 1265
MspR9I	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
Mva1269I	GAATGC	1 cut(s)	164
MvaI	CCWGG	5 cut(s)	44, 127, 313, 1119, 1358
MvnI	CGCG	1 cut(s)	180
MwoI	GCNNNNNNNGC	9 cut(s)	156, 161, 177, 535, 755, 830, 855, 1100, 1390
NaeI	GCCGGC	1 cut(s)	391
NciI	CCSGG	1 cut(s)	1236
NdeII	GATC	2 cut(s)	198, 450
NgoMIV	GCCGGC	1 cut(s)	389
NlaIV	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
NmuCI	GTSAC	3 cut(s)	516, 556, 929
NsiI	ATGCAT	1 cut(s)	545
NspI	RCATGY	1 cut(s)	1384
PagI	TCATGA	1 cut(s)	1215
PceI	AGGCCT	1 cut(s)	316
PciSI	GCTCTTC	1 cut(s)	1055
PcsI	WCGNNNNNNNCGW	1 cut(s)	363
PctI	GAATGC	1 cut(s)	164
PdiI	GCCGGC	1 cut(s)	391
PfeI	GAWTC	3 cut(s)	606, 739, 1012
PflFI	GACNNNGTC	1 cut(s)	323
PflMI	CCANNNNNTGG	1 cut(s)	1203
PinAI	ACCGGT	1 cut(s)	626
PkrI	GCNGC	6 cut(s)	757, 809, 832, 1210, 1367, 1392
PleI	GAGTC	3 cut(s)	13, 813, 881
PmaCI	CACGTG	1 cut(s)	1081
PmlI	CACGTG	1 cut(s)	1081
PpsI	GAGTC	3 cut(s)	13, 813, 881
Ppu21I	YACGTR	2 cut(s)	510, 1081
PpuMI	RGGWCCY	1 cut(s)	1129
PshAI	GACNNNNGTC	1 cut(s)	297
PshBI	ATTAAT	1 cut(s)	57
Psp124BI	GAGCTC	1 cut(s)	681
Psp5II	RGGWCCY	1 cut(s)	1129
Psp6I	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
PspCI	CACGTG	1 cut(s)	1081
PspGI	CCWGG	5 cut(s)	42, 125, 311, 1117, 1356
PspN4I	GGNNCC	8 cut(s)	452, 490, 663, 690, 778, 888, 1130, 1131
PspOMI	GGGCCC	1 cut(s)	661
PspPI	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
PspPPI	RGGWCCY	1 cut(s)	1129
PsuI	RGATCY	1 cut(s)	450
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	1 cut(s)	563
RsaI	GTAC	4 cut(s)	257, 512, 1193, 1337
RsaNI	GTAC	4 cut(s)	256, 511, 1192, 1336
RseI	CAYNNNNRTG	2 cut(s)	548, 1002
SacI	GAGCTC	1 cut(s)	681
SapI	GCTCTTC	1 cut(s)	1055
SaqAI	TTAA	7 cut(s)	57, 429, 441, 714, 798, 1374, 1411
SatI	GCNGC	6 cut(s)	756, 808, 831, 1209, 1366, 1391
Sau3AI	GATC	2 cut(s)	198, 450
Sau96I	GGNCC	6 cut(s)	661, 662, 688, 886, 994, 1129
SchI	GAGTC	3 cut(s)	14, 813, 882
ScrFI	CCNGG	6 cut(s)	44, 127, 313, 1119, 1236, 1358
SduI	GDGCHC	7 cut(s)	141, 372, 491, 624, 665, 681, 779
SfaNI	GCATC	5 cut(s)	334, 538, 605, 645, 842
SinI	GGWCC	3 cut(s)	886, 994, 1129
SmiMI	CAYNNNNRTG	2 cut(s)	548, 1002
SmlI	CTYRAG	2 cut(s)	428, 902
SmoI	CTYRAG	2 cut(s)	428, 902
SnaBI	TACGTA	1 cut(s)	510
Sse9I	AATT	4 cut(s)	25, 62, 104, 1408
SseBI	AGGCCT	1 cut(s)	316
SspI	AATATT	2 cut(s)	55, 1249
SspMI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
SstI	GAGCTC	1 cut(s)	681
StuI	AGGCCT	1 cut(s)	316
StyD4I	CCNGG	6 cut(s)	42, 125, 311, 1117, 1234, 1356
StyI	CCWWGG	3 cut(s)	837, 984, 1279
TaaI	ACNGT	5 cut(s)	238, 323, 338, 359, 499
TaiI	ACGT	4 cut(s)	473, 512, 646, 1083
TaqI	TCGA	2 cut(s)	1113, 1227
TasI	AATT	4 cut(s)	25, 62, 104, 1408
TatI	WGTACW	1 cut(s)	1335
TauI	GCSGC	4 cut(s)	810, 833, 1368, 1393
TfiI	GAWTC	3 cut(s)	606, 739, 1012
Tru1I	TTAA	7 cut(s)	57, 429, 441, 714, 798, 1374, 1411
Tru9I	TTAA	7 cut(s)	57, 429, 441, 714, 798, 1374, 1411
TscAI	CASTG	3 cut(s)	241, 467, 751
TseFI	GTSAC	3 cut(s)	516, 556, 929
TseI	GCWGC	2 cut(s)	755, 1208
Tsp45I	GTSAC	3 cut(s)	516, 556, 929
TspDTI	ATGAA	6 cut(s)	6, 75, 97, 398, 663, 978
TspGWI	ACGGA	4 cut(s)	133, 722, 804, 885
TspRI	CASTG	3 cut(s)	241, 467, 751
Tth111I	GACNNNGTC	1 cut(s)	323
Van91I	CCANNNNNTGG	1 cut(s)	1203
Vha464I	CTTAAG	1 cut(s)	428
VpaK11BI	GGWCC	3 cut(s)	886, 994, 1129
VspI	ATTAAT	1 cut(s)	57
XapI	RAATTY	1 cut(s)	104
XceI	RCATGY	1 cut(s)	1384
XmaJI	CCTAGG	1 cut(s)	1279
XspI	CTAG	5 cut(s)	554, 750, 759, 1280, 1314
Zsp2I	ATGCAT	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.