Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Reverse (-)

88199379 .. 88201240

Gene Structure 1862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000037086

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGTCCGGAATGATGCTTCTGCTGCTGCTATGTCTCTCACTGGGGACAATTTCAGTCGTGCACTGTGGAGACCCTACCATAAACTTCGAATGGAATGTCACACATGGAACCCTCTCTCCACTGGGAGTCCCACAGCAAGTCATTCTCATCAATGGCCAATTTCCTGGTCCCAACATTAATTCCACCACAAACAACAACGTAGTCGTGAACGTGTTCAATAACCTGGACGAGCCATTCCTTTTGACATGGAGTGGTATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACCTGGAACTATGTGCCCCATACCTGCGGGTAAGAACTTCACCTATCAGTTCCAGGTGAAGGATCAGATTGGCAGCTTTATATACTATCCAACAACTGCTATGCACAGGGCTGGCGGTGCATTCGGCGGTCTCCGAGTGAATAGTCGTCTAATGATCCCAGTTCCTTATGATACTCCGGAGGATGACTACACTGTCCTCATCGGGGACTGGTACACCAAAAGCCACAACGCTCTCAAGAAACTACTTGACAGCGGTCGCAGTATGGCCAGGCCTGACGGTGTCCTCATCAACGGTAAAGATGCAAAGGGCGACGGTAAAGACGAGCCCCTCTTCACCATGAAAGCCGGCAAGACCTACAAGTATAGGATTTGCAATGTAGGTATTAAGAACACCCTTAACTTTAGGATCCAAGAACACTGGATGACGTTAGTGGAGATGGAGGGCTCCCACACAGTCCAAAATACGTACCAGTCACTTGATGTGCATCTCGGGCAATGCATGGCGGTGCTAGTCACAGCTGACAAAGACCCCAAAGACTATTACATGGTAGCATCCACAAGATTCACCAAAAGCGTGCTAACCGGTAAGGGCATCATACGTTATGAAAATGGTAAGGGCCCTGCTGACCCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAATCTCACTGCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCACTACGGAAAGATTAACATCAGCCGCACCATCAGACTCGCCAACGCCGCATCCAAGGTGGATGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTATGGAGTGGGTGACAAGGTGTTCAAGACTGACACCATCAAGGATGAACCCCCAGAGGACGAGACCAAGGTAGAGGTCCATCCCAATGTTGTGAATCAAACCCACAGAGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCCTCCAGACATGGCACGTGTCGGGATACGCCATCTTTGCCGTCGCCATCGAGCCAGGGAGATGGGACCCAGAAAAAAGGAAAAACTACAACCTTCTTGACGCTGTGAGCAGGCACACAATCCAAGTGTACCCCAAATCATGGGCTGCCATCATGACCTCATTCGACAACCCCGGAATGTGGAATATTAGGTCAGAACATCCGGAAAGGCGCTACCTAGGGCAACAACTCTATGTCGCCGTTCCTAATCCTAGCCGTTCTACAAGGGACGAGTACAATATGCCAGACACCGCCCTGGTCTGCGGCATCGTTAAGGACATGCCCAAGCCGCCCCCACCTTACGGAAGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

554

Amino Acids

62.08

Weight (kDa)

7.66

Isoelectric Point (pI)

33.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	1.7e-39	Multicopper oxidase
Cu-oxidase	PF00394	158 - 300	1.7e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	381 - 520	7e-26	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	482
Acc36I	ACCTGC	1 cut(s)	322
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccBSI	CCGCTC	1 cut(s)	972
AccIII	TCCGGA	3 cut(s)	5, 466, 1510
AclWI	GGATC	4 cut(s)	360, 439, 691, 704
AcoI	YGGCCR	2 cut(s)	154, 555
AcsI	RAATTY	1 cut(s)	271
AcvI	CACGTG	1 cut(s)	1327
AfaI	GTAC	4 cut(s)	503, 758, 1439, 1583
AfiI	CCNNNNNNNGG	6 cut(s)	349, 493, 981, 1449, 1488, 1649
AflIII	ACRYGT	2 cut(s)	210, 1326
AgeI	ACCGGT	1 cut(s)	872
AgsI	TTSAA	2 cut(s)	217, 1189
AjnI	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1363, 1602
AloI	GAACNNNNNNTCC	2 cut(s)	100, 132
AluBI	AGCT	5 cut(s)	366, 809, 925, 1099, 1153
AluI	AGCT	5 cut(s)	366, 809, 925, 1099, 1153
Alw21I	GWGCWC	2 cut(s)	63, 927
Alw26I	GTCTC	7 cut(s)	38, 63, 425, 960, 1126, 1220, 1266
Alw44I	GTGCAC	1 cut(s)	59
AlwI	GGATC	4 cut(s)	360, 439, 691, 704
Ama87I	CYCGRG	2 cut(s)	779, 920
Aor13HI	TCCGGA	3 cut(s)	5, 466, 1510
AoxI	GGCC	5 cut(s)	154, 555, 560, 907, 933
ApaI	GGGCCC	1 cut(s)	911
ApaLI	GTGCAC	1 cut(s)	59
ApeKI	GCWGC	5 cut(s)	22, 25, 363, 1001, 1454
ApoI	RAATTY	1 cut(s)	271
ArsI	GACNNNNNNTTYG	2 cut(s)	81, 113
AseI	ATTAAT	1 cut(s)	177
AsiGI	ACCGGT	1 cut(s)	872
Asp700I	GAANNNNTTC	1 cut(s)	212
AspA2I	CCTAGG	1 cut(s)	1525
AspLEI	GCGC	1 cut(s)	1521
AspS9I	GGNCC	7 cut(s)	167, 907, 908, 934, 1132, 1240, 1375
AsuC2I	CCSGG	1 cut(s)	1482
AsuHPI	GGTGA	5 cut(s)	322, 358, 616, 847, 1187
AsuII	TTCGAA	1 cut(s)	87
AvaI	CYCGRG	2 cut(s)	779, 920
AvaII	GGWCC	4 cut(s)	167, 1132, 1240, 1375
AvrII	CCTAGG	1 cut(s)	1525
AxyI	CCTNAGG	2 cut(s)	930, 1017
BaeGI	GKGCMC	3 cut(s)	63, 308, 911
BalI	TGGCCA	2 cut(s)	156, 557
BamHI	GGATCC	1 cut(s)	696
BanII	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
BauI	CACGAG	1 cut(s)	1301
BbrPI	CACGTG	1 cut(s)	1327
Bbv12I	GWGCWC	2 cut(s)	63, 927
BbvI	GCAGC	5 cut(s)	9, 12, 375, 988, 1441
BceAI	ACGGC	3 cut(s)	1334, 1532, 1548
BciT130I	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1365, 1604
BciVI	GTATCC	2 cut(s)	266, 1328
BcnI	CCSGG	1 cut(s)	1482
BcoDI	GTCTC	7 cut(s)	38, 63, 425, 960, 1126, 1220, 1266
BfaI	CTAG	5 cut(s)	800, 996, 1005, 1526, 1560
BfoI	RGCGCY	1 cut(s)	1522
BfuAI	ACCTGC	1 cut(s)	322
BfuI	GTATCC	2 cut(s)	266, 1328
BisI	GCNGC	9 cut(s)	23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
BlnI	CCTAGG	1 cut(s)	1525
BlsI	GCNGC	9 cut(s)	24, 27, 365, 1003, 1055, 1078, 1456, 1613, 1638
Bme1390I	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1365, 1482, 1604
Bme18I	GGWCC	4 cut(s)	167, 1132, 1240, 1375
BmeT110I	CYCGRG	2 cut(s)	779, 920
BmgT120I	GGNCC	7 cut(s)	167, 907, 908, 934, 1132, 1240, 1375
BmrFI	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1365, 1482, 1604
BmrI	ACTGGG	3 cut(s)	50, 131, 443
BmsI	GCATC	7 cut(s)	3, 580, 784, 851, 891, 1088, 1623
BmuI	ACTGGG	3 cut(s)	50, 131, 443
BoxI	GACNNNNGTC	1 cut(s)	543
BpmI	CTGGAG	1 cut(s)	1298
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	2 cut(s)	509, 1133
BpuMI	CCSGG	1 cut(s)	1482
BsaAI	YACGTR	2 cut(s)	756, 1327
BsaBI	GATNNNNATC	2 cut(s)	774, 1046
BsaI	GGTCTC	4 cut(s)	63, 425, 960, 1220
BsaJI	CCNNGG	6 cut(s)	1083, 1230, 1364, 1480, 1525, 1602
BsaWI	WCCGGW	4 cut(s)	5, 466, 872, 1510
BsaXI	ACNNNNNCTCC	4 cut(s)	100, 130, 1106, 1136
Bsc4I	CCNNNNNNNGG	6 cut(s)	349, 493, 981, 1449, 1488, 1649
Bse118I	RCCGGY	2 cut(s)	635, 872
Bse1I	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 964
Bse21I	CCTNAGG	2 cut(s)	930, 1017
Bse3DI	GCAATG	2 cut(s)	670, 791
Bse8I	GATNNNNATC	2 cut(s)	774, 1046
BseAI	TCCGGA	3 cut(s)	5, 466, 1510
BseBI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1365, 1604
BseDI	CCNNGG	6 cut(s)	1083, 1230, 1364, 1480, 1525, 1602
BseGI	GGATG	9 cut(s)	478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BseJI	GATNNNNATC	2 cut(s)	774, 1046
BseLI	CCNNNNNNNGG	6 cut(s)	349, 493, 981, 1449, 1488, 1649
BseMI	GCAATG	2 cut(s)	670, 791
BseMII	CTCAG	2 cut(s)	921, 1031
BseNI	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 964
BseSI	GKGCMC	3 cut(s)	63, 308, 911
BseXI	GCAGC	5 cut(s)	9, 12, 375, 988, 1441
Bsh1285I	CGRYCG	1 cut(s)	547
BshFI	GGCC	5 cut(s)	156, 557, 562, 909, 935
BshTI	ACCGGT	1 cut(s)	872
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	2 cut(s)	63, 927
BsiHKCI	CYCGRG	2 cut(s)	779, 920
BsiSI	CCGG	6 cut(s)	6, 467, 636, 873, 1482, 1511
BslFI	GGGAC	6 cut(s)	58, 113, 153, 509, 1388, 1589
BslI	CCNNNNNNNGG	6 cut(s)	349, 493, 981, 1449, 1488, 1649
BsmAI	GTCTC	7 cut(s)	38, 63, 425, 960, 1126, 1220, 1266
BsmFI	GGGAC	6 cut(s)	58, 113, 153, 509, 1388, 1589
BsmI	GAATGC	1 cut(s)	410
BsnI	GGCC	5 cut(s)	156, 557, 562, 909, 935
Bso31I	GGTCTC	4 cut(s)	63, 425, 960, 1220
BsoBI	CYCGRG	2 cut(s)	779, 920
Bsp119I	TTCGAA	1 cut(s)	87
Bsp120I	GGGCCC	1 cut(s)	907
Bsp1286I	GDGCHC	7 cut(s)	63, 308, 618, 737, 911, 927, 1025
Bsp13I	TCCGGA	3 cut(s)	5, 466, 1510
Bsp143I	GATC	3 cut(s)	352, 444, 696
BspANI	GGCC	5 cut(s)	156, 557, 562, 909, 935
BspCNI	CTCAG	2 cut(s)	922, 1030
BspEI	TCCGGA	3 cut(s)	5, 466, 1510
BspHI	TCATGA	1 cut(s)	1461
BspMI	ACCTGC	1 cut(s)	322
BspPI	GGATC	4 cut(s)	360, 439, 691, 704
BspQI	GCTCTTC	1 cut(s)	1301
BspT104I	TTCGAA	1 cut(s)	87
BspTNI	GGTCTC	4 cut(s)	63, 425, 960, 1220
BsrBI	CCGCTC	1 cut(s)	972
BsrDI	GCAATG	2 cut(s)	670, 791
BsrFI	RCCGGY	2 cut(s)	635, 872
BsrI	ACTGG	7 cut(s)	45, 126, 449, 503, 713, 760, 964
BssAI	RCCGGY	2 cut(s)	635, 872
BssECI	CCNNGG	6 cut(s)	1083, 1230, 1364, 1480, 1525, 1602
BssMI	GATC	3 cut(s)	352, 444, 696
BssSI	CACGAG	1 cut(s)	1301
BssT1I	CCWWGG	3 cut(s)	1083, 1230, 1525
Bst2BI	CACGAG	1 cut(s)	1301
Bst2UI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1365, 1604
Bst4CI	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
Bst6I	CTCTTC	2 cut(s)	626, 1301
BstBAI	YACGTR	2 cut(s)	756, 1327
BstBI	TTCGAA	1 cut(s)	87
BstC8I	GCNNGC	6 cut(s)	403, 637, 866, 1097, 1155, 1421
BstDEI	CTNAG	2 cut(s)	930, 1017
BstF5I	GGATG	9 cut(s)	478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BstH2I	RGCGCY	1 cut(s)	1522
BstHHI	GCGC	1 cut(s)	1521
BstKTI	GATC	3 cut(s)	355, 447, 699
BstMAI	GTCTC	7 cut(s)	38, 63, 425, 960, 1126, 1220, 1266
BstMBI	GATC	3 cut(s)	352, 444, 696
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 407, 781, 1001, 1076, 1101, 1346, 1636
BstNI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1365, 1604
BstNSI	RCATGY	1 cut(s)	1630
BstPAI	GACNNNNGTC	1 cut(s)	543
BstSCI	CCNGG	8 cut(s)	163, 222, 292, 342, 557, 1363, 1480, 1602
BstSLI	GKGCMC	3 cut(s)	63, 308, 911
BstSNI	TACGTA	1 cut(s)	756
BstV1I	GCAGC	5 cut(s)	9, 12, 375, 988, 1441
BstX2I	RGATCY	1 cut(s)	696
BstXI	CCANNNNNNTGG	3 cut(s)	164, 945, 1371
BstYI	RGATCY	1 cut(s)	696
Bsu36I	CCTNAGG	2 cut(s)	930, 1017
BsuI	GTATCC	2 cut(s)	266, 1328
BsuRI	GGCC	5 cut(s)	156, 557, 562, 909, 935
BtsCI	GGATG	9 cut(s)	478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BtsI	GCAGTG	1 cut(s)	990
BtsIMutI	CAGTG	6 cut(s)	38, 61, 119, 480, 706, 990
BveI	ACCTGC	1 cut(s)	322
Cac8I	GCNNGC	6 cut(s)	403, 637, 866, 1097, 1155, 1421
CciI	TCATGA	1 cut(s)	1461
CfoI	GCGC	1 cut(s)	1521
Cfr10I	RCCGGY	2 cut(s)	635, 872
Cfr13I	GGNCC	7 cut(s)	167, 907, 908, 934, 1132, 1240, 1375
CseI	GACGC	1 cut(s)	1418
Csp6I	GTAC	4 cut(s)	502, 757, 1438, 1582
CspAI	ACCGGT	1 cut(s)	872
CviQI	GTAC	4 cut(s)	502, 757, 1438, 1582
DdeI	CTNAG	2 cut(s)	930, 1017
DpnI	GATC	3 cut(s)	354, 446, 698
DpnII	GATC	3 cut(s)	352, 444, 696
DrdI	GACNNNNNNGTC	1 cut(s)	482
DseDI	GACNNNNNNGTC	1 cut(s)	482
EaeI	YGGCCR	2 cut(s)	154, 555
Eam1104I	CTCTTC	2 cut(s)	626, 1301
EarI	CTCTTC	2 cut(s)	626, 1301
Ecl136II	GAGCTC	1 cut(s)	925
Eco105I	TACGTA	1 cut(s)	756
Eco130I	CCWWGG	3 cut(s)	1083, 1230, 1525
Eco147I	AGGCCT	1 cut(s)	562
Eco24I	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
Eco31I	GGTCTC	4 cut(s)	63, 425, 960, 1220
Eco47I	GGWCC	4 cut(s)	167, 1132, 1240, 1375
Eco53kI	GAGCTC	1 cut(s)	925
Eco72I	CACGTG	1 cut(s)	1327
Eco81I	CCTNAGG	2 cut(s)	930, 1017
Eco88I	CYCGRG	2 cut(s)	779, 920
EcoICRI	GAGCTC	1 cut(s)	925
EcoO109I	RGGNCCY	4 cut(s)	907, 908, 934, 1375
EcoRI	GAATTC	1 cut(s)	271
EcoRII	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1363, 1602
EcoT14I	CCWWGG	3 cut(s)	1083, 1230, 1525
EcoT22I	ATGCAT	1 cut(s)	791
EcoT38I	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
ErhI	CCWWGG	3 cut(s)	1083, 1230, 1525
FaqI	GGGAC	6 cut(s)	58, 113, 153, 509, 1388, 1589
FauI	CCCGC	1 cut(s)	310
Fnu4HI	GCNGC	9 cut(s)	23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
FokI	GGATG	9 cut(s)	485, 724, 829, 957, 1066, 1103, 1220, 1230, 1494
FriOI	GRGCYC	5 cut(s)	618, 737, 911, 927, 1025
Fsp4HI	GCNGC	9 cut(s)	23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
FspBI	CTAG	5 cut(s)	800, 996, 1005, 1526, 1560
GlaI	GCGC	1 cut(s)	1520
GluI	GCNGC	9 cut(s)	23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
GsuI	CTGGAG	1 cut(s)	1298
HaeII	RGCGCY	1 cut(s)	1522
HaeIII	GGCC	5 cut(s)	156, 557, 562, 909, 935
HapII	CCGG	6 cut(s)	6, 467, 636, 873, 1482, 1511
HgaI	GACGC	1 cut(s)	1418
HhaI	GCGC	1 cut(s)	1521
Hin6I	GCGC	1 cut(s)	1519
HinP1I	GCGC	1 cut(s)	1519
HindIII	AAGCTT	1 cut(s)	1151
HinfI	GANTC	6 cut(s)	126, 852, 985, 1065, 1119, 1258
HpaII	CCGG	6 cut(s)	6, 467, 636, 873, 1482, 1511
HphI	GGTGA	5 cut(s)	322, 358, 616, 847, 1187
Hpy166II	GTNNAC	5 cut(s)	61, 208, 504, 1132, 1438
Hpy188I	TCNGA	4 cut(s)	357, 425, 1064, 1504
Hpy8I	GTNNAC	5 cut(s)	61, 208, 504, 1132, 1438
Hpy99I	CGWCG	2 cut(s)	605, 1355
HpyAV	CCTTC	4 cut(s)	343, 935, 985, 1412
HpyCH4III	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
HpyCH4IV	ACGT	6 cut(s)	198, 210, 716, 755, 889, 1326
HpyCH4V	TGCA	7 cut(s)	61, 394, 410, 593, 663, 775, 789
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 407, 781, 1001, 1076, 1101, 1346, 1636
HpyF3I	CTNAG	2 cut(s)	930, 1017
HpySE526I	ACGT	6 cut(s)	198, 210, 716, 755, 889, 1326
HspAI	GCGC	1 cut(s)	1519
KflI	GGGWCCC	1 cut(s)	1375
Kpn2I	TCCGGA	3 cut(s)	5, 466, 1510
KroI	GCCGGC	1 cut(s)	635
KroNI	GCCGGC	1 cut(s)	637
Kzo9I	GATC	3 cut(s)	352, 444, 696
LguI	GCTCTTC	1 cut(s)	1301
LmnI	GCTCC	4 cut(s)	740, 930, 977, 1028
Lsp1109I	GCAGC	5 cut(s)	9, 12, 375, 988, 1441
LweI	GCATC	7 cut(s)	3, 580, 784, 851, 891, 1088, 1623
MaeI	CTAG	5 cut(s)	800, 996, 1005, 1526, 1560
MaeII	ACGT	6 cut(s)	198, 210, 716, 755, 889, 1326
MaeIII	GTNAC	4 cut(s)	97, 762, 802, 1175
MalI	GATC	3 cut(s)	354, 446, 698
MbiI	CCGCTC	1 cut(s)	972
MboI	GATC	3 cut(s)	352, 444, 696
MboII	GAAGA	3 cut(s)	280, 613, 1318
MflI	RGATCY	1 cut(s)	696
MhlI	GDGCHC	7 cut(s)	63, 308, 618, 737, 911, 927, 1025
MlsI	TGGCCA	2 cut(s)	156, 557
MluCI	AATT	5 cut(s)	48, 158, 178, 271, 1657
MluNI	TGGCCA	2 cut(s)	156, 557
MlyI	GAGTC	3 cut(s)	135, 1059, 1128
MmeI	TCCRAC	2 cut(s)	404, 962
Mox20I	TGGCCA	2 cut(s)	156, 557
Mph1103I	ATGCAT	1 cut(s)	791
MroI	TCCGGA	3 cut(s)	5, 466, 1510
MroNI	GCCGGC	1 cut(s)	635
MroXI	GAANNNNTTC	1 cut(s)	212
MscI	TGGCCA	2 cut(s)	156, 557
MseI	TTAA	7 cut(s)	177, 675, 687, 960, 1044, 1620, 1660
MslI	CAYNNNNRTG	2 cut(s)	794, 1248
Msp20I	TGGCCA	2 cut(s)	156, 557
MspA1I	CMGCKG	2 cut(s)	543, 809
MspI	CCGG	6 cut(s)	6, 467, 636, 873, 1482, 1511
MspR9I	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1365, 1482, 1604
Mva1269I	GAATGC	1 cut(s)	410
MvaI	CCWGG	7 cut(s)	165, 224, 294, 344, 559, 1365, 1604
MwoI	GCNNNNNNNGC	8 cut(s)	22, 407, 781, 1001, 1076, 1101, 1346, 1636
NaeI	GCCGGC	1 cut(s)	637
NciI	CCSGG	1 cut(s)	1482
NdeII	GATC	3 cut(s)	352, 444, 696
NgoMIV	GCCGGC	1 cut(s)	635
NmuCI	GTSAC	4 cut(s)	97, 762, 802, 1175
NsiI	ATGCAT	1 cut(s)	791
NspI	RCATGY	1 cut(s)	1630
NspV	TTCGAA	1 cut(s)	87
PagI	TCATGA	1 cut(s)	1461
PceI	AGGCCT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1301
PcsI	WCGNNNNNNNCGW	1 cut(s)	609
PctI	GAATGC	1 cut(s)	410
PdiI	GCCGGC	1 cut(s)	637
PdmI	GAANNNNTTC	1 cut(s)	212
PfeI	GAWTC	3 cut(s)	852, 985, 1258
PflFI	GACNNNGTC	1 cut(s)	569
PflMI	CCANNNNNTGG	1 cut(s)	1449
PinAI	ACCGGT	1 cut(s)	872
PkrI	GCNGC	9 cut(s)	24, 27, 365, 1003, 1055, 1078, 1456, 1613, 1638
PleI	GAGTC	3 cut(s)	134, 1059, 1127
PmaCI	CACGTG	1 cut(s)	1327
PmlI	CACGTG	1 cut(s)	1327
PpsI	GAGTC	3 cut(s)	134, 1059, 1127
Ppu21I	YACGTR	2 cut(s)	756, 1327
PpuMI	RGGWCCY	1 cut(s)	1375
PshAI	GACNNNNGTC	1 cut(s)	543
PshBI	ATTAAT	1 cut(s)	177
Psp124BI	GAGCTC	1 cut(s)	927
Psp5II	RGGWCCY	1 cut(s)	1375
Psp6I	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1363, 1602
PspCI	CACGTG	1 cut(s)	1327
PspGI	CCWGG	7 cut(s)	163, 222, 292, 342, 557, 1363, 1602
PspOMI	GGGCCC	1 cut(s)	907
PspPI	GGNCC	7 cut(s)	167, 907, 908, 934, 1132, 1240, 1375
PspPPI	RGGWCCY	1 cut(s)	1375
PsuI	RGATCY	1 cut(s)	696
PsyI	GACNNNGTC	1 cut(s)	569
PvuII	CAGCTG	1 cut(s)	809
RsaI	GTAC	4 cut(s)	503, 758, 1439, 1583
RsaNI	GTAC	4 cut(s)	502, 757, 1438, 1582
RseI	CAYNNNNRTG	2 cut(s)	794, 1248
SacI	GAGCTC	1 cut(s)	927
SapI	GCTCTTC	1 cut(s)	1301
SaqAI	TTAA	7 cut(s)	177, 675, 687, 960, 1044, 1620, 1660
SatI	GCNGC	9 cut(s)	23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
Sau3AI	GATC	3 cut(s)	352, 444, 696
Sau96I	GGNCC	7 cut(s)	167, 907, 908, 934, 1132, 1240, 1375
SchI	GAGTC	3 cut(s)	135, 1059, 1128
ScrFI	CCNGG	8 cut(s)	165, 224, 294, 344, 559, 1365, 1482, 1604
SduI	GDGCHC	7 cut(s)	63, 308, 618, 737, 911, 927, 1025
SfaNI	GCATC	7 cut(s)	3, 580, 784, 851, 891, 1088, 1623
SfuI	TTCGAA	1 cut(s)	87
SinI	GGWCC	4 cut(s)	167, 1132, 1240, 1375
SmiMI	CAYNNNNRTG	2 cut(s)	794, 1248
SmlI	CTYRAG	2 cut(s)	524, 1148
SmoI	CTYRAG	2 cut(s)	524, 1148
SnaBI	TACGTA	1 cut(s)	756
Sse9I	AATT	5 cut(s)	48, 158, 178, 271, 1657
SseBI	AGGCCT	1 cut(s)	562
SspI	AATATT	1 cut(s)	1495
SspMI	CTAG	5 cut(s)	800, 996, 1005, 1526, 1560
SstI	GAGCTC	1 cut(s)	927
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	8 cut(s)	163, 222, 292, 342, 557, 1363, 1480, 1602
StyI	CCWWGG	3 cut(s)	1083, 1230, 1525
TaaI	ACNGT	6 cut(s)	65, 484, 569, 584, 605, 745
TaiI	ACGT	6 cut(s)	201, 213, 719, 758, 892, 1329
TaqI	TCGA	3 cut(s)	87, 1359, 1473
TasI	AATT	5 cut(s)	48, 158, 178, 271, 1657
TatI	WGTACW	1 cut(s)	1581
TauI	GCSGC	4 cut(s)	1056, 1079, 1614, 1639
TfiI	GAWTC	3 cut(s)	852, 985, 1258
Tru1I	TTAA	7 cut(s)	177, 675, 687, 960, 1044, 1620, 1660
Tru9I	TTAA	7 cut(s)	177, 675, 687, 960, 1044, 1620, 1660
TscAI	CASTG	6 cut(s)	45, 68, 126, 487, 713, 997
TseFI	GTSAC	4 cut(s)	97, 762, 802, 1175
TseI	GCWGC	5 cut(s)	22, 25, 363, 1001, 1454
Tsp45I	GTSAC	4 cut(s)	97, 762, 802, 1175
TspDTI	ATGAA	4 cut(s)	264, 644, 909, 1224
TspGWI	ACGGA	4 cut(s)	300, 968, 1050, 1131
TspRI	CASTG	6 cut(s)	45, 68, 126, 487, 713, 997
Tth111I	GACNNNGTC	1 cut(s)	569
Van91I	CCANNNNNTGG	1 cut(s)	1449
VneI	GTGCAC	1 cut(s)	59
VpaK11BI	GGWCC	4 cut(s)	167, 1132, 1240, 1375
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	1 cut(s)	271
XceI	RCATGY	1 cut(s)	1630
XmaJI	CCTAGG	1 cut(s)	1525
XmnI	GAANNNNTTC	1 cut(s)	212
XspI	CTAG	5 cut(s)	800, 996, 1005, 1526, 1560
Zsp2I	ATGCAT	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.