Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Forward (+)

22645397 .. 22647043

Gene Structure 1647 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44201

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGAATATTTTGTTGTTGTGCCTCTTGATTGGCGCAATCTCGGTTGTTCATGGTGAGGATCCTTACCTTTTCTTCACATGGAATGTAACCTATGGAACCATCTCTCCCCTAGGAGTCCCCCAGCAAGGCATTCTCATCAACGGCGAGTTTCCGGGACCTAACATTAACTCCACCACCAATAACAACATCGTCATCAATGTCTTCAACAACCTTGATGAACCATTGATGTTCACATGGAATGGAATCCAACAGAAGAAGAATTCATGGCAAGATGGAACACCAGGGACTATGTGCCCTATTCCTCCTGGTCAGAACTACACGTACCACTTCCAAGTGAAGGACCAGATTGGAAGCTATTTCTACTATCCCATCACCGCCATGCACAGAGCAGGTGGTGCCTTTGGTGGCCTCCGCATTAACAGTCGTCTCTTGATCCCAGTTCCATATGCTGATCCCGAGGATGACTACACCGTCCTCATCGGCGACTGGTACACCAAAAGCCACAGCAGTCTCAGGAAACAATTGGACATGGGTCGCTCCTTGGGAAGGCCTGACGGTGTCCTCATTAATGGCAAGAACGCAAAGGGAGATGGCACTGATGAGCCCCTCTTCAACATGACGCCCGGAAAGACCTACAAGTTCAGAGTCTGCAATGTTGGTCTCAAGAACTCGCTCAACTTCAGGATCCAAGGCCACACAATGAAGCTTGTTGAGATGGAAGGCTCTCACGTCGTCCAGAACATATACGAGTCTCTTGATGTGCATCTCGGGCAATGCTTTTCGGCGCTTGTCACGGCTGACAAAGAACCTATGGACTACTACATGGTGGCTGACACCCGATTCACCAAGACTATGCTCAACGGTTTAGGCATTATTCGATACACCAACGGTAAGGGTCCCGCAAGCCCCGAACTCCCTTCGCCCCCTGTGGGATTGGATTGGTCTCTCAACCAAGCCCGCTCCTTCAGATGGAACCTCACTGCCAGTGCTGCCAGGCCTAACCCTCAAGGCTCCTATCACTATGGTGCCATCAACATCACCCGCACCATCAAGCTCGTCAACTCTGCCAGCAAGGTTGATGGCAAGCTGCGCTATGCCATAAATGGAGTCTCCCACATTGATATTGAAACCCCACTCAAGTATGCCCAGTACTTTGGAGTTGCGGACAAGGTCTTCAAGTACGATATCATCAAGGACGAGCCCTCAGCTGAAGCAGAAGACAAGATCACCTTAGCACCTAATGTTGTCAACCAAACCTACCGGGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCATTCAGTCATGGCATCTGGATGGATTCGCTTTCTTTCCCGCTGCCATTGAGTTTGGGAGGTGGGCACCAGAGAAGAGAAGGAACTACAACCTTCTTGACGCCATAAGCCGACACACCGTCCACGTGTATCCCGGCTCATGGGCCGCCATTATGTTGACATTCGACAACGCTGGAATGTGGAACTTGAGGTCAGCACAGCCGGAGAGGGCGTACCTAGGACAACAGCTCTACCTGAGTGTTGAAAATGTCGCACGCTCTCTCAGGGACGAGTACATGATGCCAGACCAGACACCTCTCTGTGGCATCGTCAAGGGTCTCCCTCAACCCCCTCCATACGGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

548

Amino Acids

61.44

Weight (kDa)

6.68

Isoelectric Point (pI)

41.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	28 - 142	1.7e-39	Multicopper oxidase
Cu-oxidase	PF00394	154 - 296	1.4e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	378 - 516	5.9e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	380
AasI	GACNNNNNNGTC	1 cut(s)	470
Acc36I	ACCTGC	1 cut(s)	380
AccB1I	GGYRCC	3 cut(s)	395, 1025, 1366
AccBSI	CCGCTC	1 cut(s)	960
AciI	CCGC	8 cut(s)	375, 412, 900, 958, 1042, 1163, 1341, 1446
AclWI	GGATC	6 cut(s)	53, 66, 427, 446, 679, 692
AcsI	RAATTY	1 cut(s)	259
AcuI	CTGAAG	3 cut(s)	664, 949, 1230
AcvI	CACGTG	1 cut(s)	1426
AcyI	GRCGYC	2 cut(s)	620, 1401
AfaI	GTAC	6 cut(s)	323, 491, 1151, 1181, 1514, 1574
AfiI	CCNNNNNNNGG	8 cut(s)	125, 337, 546, 929, 969, 1440, 1601, 1637
AflIII	ACRYGT	2 cut(s)	318, 1425
AgsI	TTSAA	5 cut(s)	205, 613, 1127, 1177, 1544
AhdI	GACNNNNNGTC	1 cut(s)	1418
AjiI	CACGTC	1 cut(s)	730
AjnI	CCWGG	3 cut(s)	280, 304, 992
AleI	CACNNNNGTG	1 cut(s)	1023
AloI	GAACNNNNNNTCC	2 cut(s)	88, 120
AluBI	AGCT	6 cut(s)	354, 706, 1054, 1087, 1208, 1528
AluI	AGCT	6 cut(s)	354, 706, 1054, 1087, 1208, 1528
Alw26I	GTCTC	7 cut(s)	431, 515, 665, 756, 948, 1114, 1622
AlwI	GGATC	6 cut(s)	53, 66, 427, 446, 679, 692
AlwNI	CAGNNNCTG	1 cut(s)	648
Ama87I	CYCGRG	2 cut(s)	455, 767
AoxI	GGCC	6 cut(s)	406, 548, 691, 995, 1443, 1639
ApeKI	GCWGC	3 cut(s)	989, 1087, 1343
ApoI	RAATTY	1 cut(s)	259
AseI	ATTAAT	1 cut(s)	567
AspA2I	CCTAGG	2 cut(s)	109, 1516
AspLEI	GCGC	3 cut(s)	35, 787, 1092
AspS9I	GGNCC	5 cut(s)	155, 340, 896, 1443, 1640
AsuC2I	CCSGG	4 cut(s)	153, 624, 1262, 1434
AsuHPI	GGTGA	5 cut(s)	65, 364, 835, 1030, 1219
AvaI	CYCGRG	2 cut(s)	455, 767
AvaII	GGWCC	3 cut(s)	155, 340, 896
AvrII	CCTAGG	2 cut(s)	109, 1516
BaeGI	GKGCMC	2 cut(s)	296, 1369
BamHI	GGATCC	2 cut(s)	58, 684
BanI	GGYRCC	3 cut(s)	395, 1025, 1366
BanII	GRGCYC	2 cut(s)	606, 1203
BauI	CACGAG	1 cut(s)	1292
BbrPI	CACGTG	1 cut(s)	1426
BbsI	GAAGAC	3 cut(s)	193, 1165, 1224
BbvCI	CCTCAGC	1 cut(s)	1204
BbvI	GCAGC	3 cut(s)	976, 1074, 1330
BceAI	ACGGC	2 cut(s)	157, 810
BciT130I	CCWGG	3 cut(s)	282, 306, 994
BciVI	GTATCC	1 cut(s)	1440
BcnI	CCSGG	4 cut(s)	153, 624, 1262, 1434
BcoDI	GTCTC	7 cut(s)	431, 515, 665, 756, 948, 1114, 1622
BfaI	CTAG	2 cut(s)	110, 1517
BfoI	RGCGCY	1 cut(s)	788
BfuAI	ACCTGC	1 cut(s)	380
BfuI	GTATCC	1 cut(s)	1440
BisI	GCNGC	4 cut(s)	990, 1088, 1344, 1446
BlnI	CCTAGG	2 cut(s)	109, 1516
BlsI	GCNGC	4 cut(s)	991, 1089, 1345, 1447
BmcAI	AGTACT	1 cut(s)	1151
Bme1390I	CCNGG	7 cut(s)	153, 282, 306, 624, 994, 1262, 1434
Bme18I	GGWCC	3 cut(s)	155, 340, 896
BmeRI	GACNNNNNGTC	1 cut(s)	1418
BmeT110I	CYCGRG	2 cut(s)	455, 767
BmgBI	CACGTC	1 cut(s)	730
BmgT120I	GGNCC	5 cut(s)	155, 340, 896, 1443, 1640
BmrFI	CCNGG	7 cut(s)	153, 282, 306, 624, 994, 1262, 1434
BmrI	ACTGGG	2 cut(s)	431, 1141
BmsI	GCATC	4 cut(s)	772, 1324, 1569, 1614
BmuI	ACTGGG	2 cut(s)	431, 1141
BoxI	GACNNNNGTC	1 cut(s)	531
BpiI	GAAGAC	3 cut(s)	193, 1165, 1224
Bpu10I	CCTNAGC	2 cut(s)	1204, 1231
BpuEI	CTTGAG	4 cut(s)	647, 990, 1121, 1507
BpuMI	CCSGG	4 cut(s)	153, 624, 1262, 1434
BsaAI	YACGTR	2 cut(s)	321, 1426
BsaBI	GATNNNNATC	1 cut(s)	762
BsaHI	GRCGYC	2 cut(s)	620, 1401
BsaI	GGTCTC	3 cut(s)	665, 948, 1622
BsaJI	CCNNGG	6 cut(s)	109, 281, 456, 540, 688, 1516
BsaXI	ACNNNNNCTCC	6 cut(s)	88, 118, 152, 182, 1496, 1526
Bsc4I	CCNNNNNNNGG	8 cut(s)	125, 337, 546, 929, 969, 1440, 1601, 1637
Bse1I	ACTGG	4 cut(s)	437, 491, 984, 1147
Bse3DI	GCAATG	2 cut(s)	658, 779
Bse8I	GATNNNNATC	1 cut(s)	762
BseBI	CCWGG	3 cut(s)	282, 306, 994
BseDI	CCNNGG	6 cut(s)	109, 281, 456, 540, 688, 1516
BseGI	GGATG	2 cut(s)	466, 1327
BseJI	GATNNNNATC	1 cut(s)	762
BseLI	CCNNNNNNNGG	8 cut(s)	125, 337, 546, 929, 969, 1440, 1601, 1637
BseMI	GCAATG	2 cut(s)	658, 779
BseMII	CTCAG	4 cut(s)	526, 1218, 1526, 1576
BseNI	ACTGG	4 cut(s)	437, 491, 984, 1147
BseSI	GKGCMC	2 cut(s)	296, 1369
BseXI	GCAGC	3 cut(s)	976, 1074, 1330
BseYI	CCCAGC	1 cut(s)	120
BshFI	GGCC	6 cut(s)	408, 550, 693, 997, 1445, 1641
BshNI	GGYRCC	3 cut(s)	395, 1025, 1366
BsiHKCI	CYCGRG	2 cut(s)	455, 767
BsiSI	CCGG	5 cut(s)	152, 624, 1261, 1434, 1502
BslFI	GGGAC	6 cut(s)	101, 168, 298, 882, 1277, 1580
BslI	CCNNNNNNNGG	8 cut(s)	125, 337, 546, 929, 969, 1440, 1601, 1637
BsmAI	GTCTC	7 cut(s)	431, 515, 665, 756, 948, 1114, 1622
BsmBI	CGTCTC	1 cut(s)	431
BsmFI	GGGAC	6 cut(s)	101, 168, 298, 882, 1277, 1580
BsmI	GAATGC	2 cut(s)	129, 1302
BsnI	GGCC	6 cut(s)	408, 550, 693, 997, 1445, 1641
Bso31I	GGTCTC	3 cut(s)	665, 948, 1622
BsoBI	CYCGRG	2 cut(s)	455, 767
Bsp1286I	GDGCHC	4 cut(s)	296, 606, 1203, 1369
Bsp143I	GATC	5 cut(s)	58, 432, 451, 684, 1224
BspACI	CCGC	8 cut(s)	375, 412, 900, 958, 1042, 1163, 1341, 1446
BspANI	GGCC	6 cut(s)	408, 550, 693, 997, 1445, 1641
BspCNI	CTCAG	4 cut(s)	525, 1217, 1527, 1575
BspMI	ACCTGC	1 cut(s)	380
BspPI	GGATC	6 cut(s)	53, 66, 427, 446, 679, 692
BspQI	GCTCTTC	1 cut(s)	1292
BspT107I	GGYRCC	3 cut(s)	395, 1025, 1366
BspTNI	GGTCTC	3 cut(s)	665, 948, 1622
BsrBI	CCGCTC	1 cut(s)	960
BsrDI	GCAATG	2 cut(s)	658, 779
BsrI	ACTGG	4 cut(s)	437, 491, 984, 1147
BssECI	CCNNGG	6 cut(s)	109, 281, 456, 540, 688, 1516
BssMI	GATC	5 cut(s)	58, 432, 451, 684, 1224
BssNI	GRCGYC	2 cut(s)	620, 1401
BssSI	CACGAG	1 cut(s)	1292
BssT1I	CCWWGG	4 cut(s)	109, 540, 688, 1516
Bst2BI	CACGAG	1 cut(s)	1292
Bst2UI	CCWGG	3 cut(s)	282, 306, 994
Bst4CI	ACNGT	6 cut(s)	422, 472, 557, 863, 890, 1420
Bst6I	CTCTTC	3 cut(s)	614, 1292, 1370
BstACI	GRCGYC	2 cut(s)	620, 1401
BstAPI	GCANNNNNTGC	1 cut(s)	395
BstBAI	YACGTR	2 cut(s)	321, 1426
BstC8I	GCNNGC	5 cut(s)	904, 958, 1069, 1085, 1555
BstDEI	CTNAG	5 cut(s)	512, 1204, 1231, 1535, 1562
BstENI	CCTNNNNNAGG	1 cut(s)	544
BstF5I	GGATG	2 cut(s)	466, 1327
BstH2I	RGCGCY	1 cut(s)	788
BstHHI	GCGC	3 cut(s)	35, 787, 1092
BstKTI	GATC	5 cut(s)	61, 435, 454, 687, 1227
BstMAI	GTCTC	7 cut(s)	431, 515, 665, 756, 948, 1114, 1622
BstMBI	GATC	5 cut(s)	58, 432, 451, 684, 1224
BstMWI	GCNNNNNNNGC	4 cut(s)	395, 769, 989, 1089
BstNI	CCWGG	3 cut(s)	282, 306, 994
BstPAI	GACNNNNGTC	1 cut(s)	531
BstSCI	CCNGG	7 cut(s)	151, 280, 304, 622, 992, 1260, 1432
BstSLI	GKGCMC	2 cut(s)	296, 1369
BstV1I	GCAGC	3 cut(s)	976, 1074, 1330
BstV2I	GAAGAC	3 cut(s)	193, 1165, 1224
BstX2I	RGATCY	2 cut(s)	58, 684
BstXI	CCANNNNNNTGG	1 cut(s)	1154
BstYI	RGATCY	2 cut(s)	58, 684
BsuI	GTATCC	1 cut(s)	1440
BsuRI	GGCC	6 cut(s)	408, 550, 693, 997, 1445, 1641
BtrI	CACGTC	1 cut(s)	730
BtsCI	GGATG	2 cut(s)	466, 1327
BtsI	GCAGTG	1 cut(s)	978
BtsIMutI	CAGTG	3 cut(s)	594, 978, 991
BveI	ACCTGC	1 cut(s)	380
Cac8I	GCNNGC	5 cut(s)	904, 958, 1069, 1085, 1555
CaiI	CAGNNNCTG	1 cut(s)	648
CfoI	GCGC	3 cut(s)	35, 787, 1092
Cfr13I	GGNCC	5 cut(s)	155, 340, 896, 1443, 1640
CseI	GACGC	2 cut(s)	628, 1409
Csp6I	GTAC	6 cut(s)	322, 490, 1150, 1180, 1513, 1573
CviQI	GTAC	6 cut(s)	322, 490, 1150, 1180, 1513, 1573
DdeI	CTNAG	5 cut(s)	512, 1204, 1231, 1535, 1562
DpnI	GATC	5 cut(s)	60, 434, 453, 686, 1226
DpnII	GATC	5 cut(s)	58, 432, 451, 684, 1224
DrdI	GACNNNNNNGTC	1 cut(s)	470
DriI	GACNNNNNGTC	1 cut(s)	1418
DseDI	GACNNNNNNGTC	1 cut(s)	470
Eam1104I	CTCTTC	3 cut(s)	614, 1292, 1370
Eam1105I	GACNNNNNGTC	1 cut(s)	1418
EarI	CTCTTC	3 cut(s)	614, 1292, 1370
Eco130I	CCWWGG	4 cut(s)	109, 540, 688, 1516
Eco147I	AGGCCT	2 cut(s)	550, 997
Eco24I	GRGCYC	2 cut(s)	606, 1203
Eco31I	GGTCTC	3 cut(s)	665, 948, 1622
Eco32I	GATATC	1 cut(s)	1186
Eco47I	GGWCC	3 cut(s)	155, 340, 896
Eco57I	CTGAAG	3 cut(s)	664, 949, 1230
Eco72I	CACGTG	1 cut(s)	1426
Eco88I	CYCGRG	2 cut(s)	455, 767
EcoNI	CCTNNNNNAGG	1 cut(s)	544
EcoO109I	RGGNCCY	2 cut(s)	155, 896
EcoRI	GAATTC	1 cut(s)	259
EcoRII	CCWGG	3 cut(s)	280, 304, 992
EcoRV	GATATC	1 cut(s)	1186
EcoT14I	CCWWGG	4 cut(s)	109, 540, 688, 1516
EcoT38I	GRGCYC	2 cut(s)	606, 1203
ErhI	CCWWGG	4 cut(s)	109, 540, 688, 1516
Esp3I	CGTCTC	1 cut(s)	431
FalI	AAGNNNNNCTT	2 cut(s)	1214, 1246
FaqI	GGGAC	6 cut(s)	101, 168, 298, 882, 1277, 1580
FauI	CCCGC	4 cut(s)	907, 965, 1049, 1348
FauNDI	CATATG	1 cut(s)	445
Fnu4HI	GCNGC	4 cut(s)	990, 1088, 1344, 1446
FokI	GGATG	2 cut(s)	473, 1334
FriOI	GRGCYC	2 cut(s)	606, 1203
Fsp4HI	GCNGC	4 cut(s)	990, 1088, 1344, 1446
FspBI	CTAG	2 cut(s)	110, 1517
GlaI	GCGC	3 cut(s)	34, 786, 1091
GluI	GCNGC	4 cut(s)	990, 1088, 1344, 1446
GsaI	CCCAGC	1 cut(s)	124
HaeII	RGCGCY	1 cut(s)	788
HaeIII	GGCC	6 cut(s)	408, 550, 693, 997, 1445, 1641
HapII	CCGG	5 cut(s)	152, 624, 1261, 1434, 1502
HgaI	GACGC	2 cut(s)	628, 1409
HhaI	GCGC	3 cut(s)	35, 787, 1092
Hin1I	GRCGYC	2 cut(s)	620, 1401
Hin6I	GCGC	3 cut(s)	33, 785, 1090
HinP1I	GCGC	3 cut(s)	33, 785, 1090
HincII	GTYRAC	3 cut(s)	1060, 1249, 1458
HindII	GTYRAC	3 cut(s)	1060, 1249, 1458
HindIII	AAGCTT	1 cut(s)	704
HinfI	GANTC	7 cut(s)	114, 243, 645, 749, 840, 1107, 1326
HpaII	CCGG	5 cut(s)	152, 624, 1261, 1434, 1502
HphI	GGTGA	5 cut(s)	65, 364, 835, 1030, 1219
Hpy166II	GTNNAC	6 cut(s)	231, 492, 1060, 1249, 1423, 1458
Hpy188I	TCNGA	3 cut(s)	312, 644, 968
Hpy8I	GTNNAC	6 cut(s)	231, 492, 1060, 1249, 1423, 1458
Hpy99I	CGWCG	1 cut(s)	734
HpyAV	CCTTC	7 cut(s)	331, 540, 713, 927, 973, 1374, 1403
HpyCH4III	ACNGT	6 cut(s)	422, 472, 557, 863, 890, 1420
HpyCH4IV	ACGT	3 cut(s)	320, 729, 1425
HpyCH4V	TGCA	3 cut(s)	382, 651, 763
HpyF10VI	GCNNNNNNNGC	4 cut(s)	395, 769, 989, 1089
HpyF3I	CTNAG	5 cut(s)	512, 1204, 1231, 1535, 1562
HpySE526I	ACGT	3 cut(s)	320, 729, 1425
Hsp92I	GRCGYC	2 cut(s)	620, 1401
HspAI	GCGC	3 cut(s)	33, 785, 1090
KflI	GGGWCCC	1 cut(s)	896
Kzo9I	GATC	5 cut(s)	58, 432, 451, 684, 1224
LguI	GCTCTTC	1 cut(s)	1292
LmnI	GCTCC	3 cut(s)	542, 965, 1016
Lsp1109I	GCAGC	3 cut(s)	976, 1074, 1330
LweI	GCATC	4 cut(s)	772, 1324, 1569, 1614
MaeI	CTAG	2 cut(s)	110, 1517
MaeII	ACGT	3 cut(s)	320, 729, 1425
MaeIII	GTNAC	2 cut(s)	85, 790
MalI	GATC	5 cut(s)	60, 434, 453, 686, 1226
MbiI	CCGCTC	1 cut(s)	960
MboI	GATC	5 cut(s)	58, 432, 451, 684, 1224
MboII	GAAGA	9 cut(s)	64, 193, 265, 268, 601, 1165, 1229, 1309, 1387
MfeI	CAATTG	1 cut(s)	521
MflI	RGATCY	2 cut(s)	58, 684
MhlI	GDGCHC	4 cut(s)	296, 606, 1203, 1369
MluCI	AATT	2 cut(s)	259, 521
MlyI	GAGTC	4 cut(s)	123, 654, 758, 1116
MmeI	TCCRAC	1 cut(s)	271
MseI	TTAA	4 cut(s)	165, 417, 567, 1645
MslI	CAYNNNNRTG	3 cut(s)	377, 1023, 1320
MspA1I	CMGCKG	2 cut(s)	1208, 1343
MspI	CCGG	5 cut(s)	152, 624, 1261, 1434, 1502
MspR9I	CCNGG	7 cut(s)	153, 282, 306, 624, 994, 1262, 1434
MunI	CAATTG	1 cut(s)	521
Mva1269I	GAATGC	2 cut(s)	129, 1302
MvaI	CCWGG	3 cut(s)	282, 306, 994
MwoI	GCNNNNNNNGC	4 cut(s)	395, 769, 989, 1089
NciI	CCSGG	4 cut(s)	153, 624, 1262, 1434
NdeI	CATATG	1 cut(s)	445
NdeII	GATC	5 cut(s)	58, 432, 451, 684, 1224
NmuCI	GTSAC	1 cut(s)	790
OliI	CACNNNNGTG	1 cut(s)	1023
PaqCI	CACCTGC	1 cut(s)	380
PceI	AGGCCT	2 cut(s)	550, 997
PciSI	GCTCTTC	1 cut(s)	1292
PctI	GAATGC	2 cut(s)	129, 1302
PfeI	GAWTC	3 cut(s)	243, 840, 1326
PflFI	GACNNNGTC	2 cut(s)	557, 1169
PfoI	TCCNGGA	1 cut(s)	151
PkrI	GCNGC	4 cut(s)	991, 1089, 1345, 1447
PleI	GAGTC	4 cut(s)	122, 653, 757, 1115
PmaCI	CACGTG	1 cut(s)	1426
PmlI	CACGTG	1 cut(s)	1426
PpsI	GAGTC	4 cut(s)	122, 653, 757, 1115
Ppu21I	YACGTR	2 cut(s)	321, 1426
PpuMI	RGGWCCY	2 cut(s)	155, 896
PshAI	GACNNNNGTC	1 cut(s)	531
PshBI	ATTAAT	1 cut(s)	567
Psp5II	RGGWCCY	2 cut(s)	155, 896
Psp6I	CCWGG	3 cut(s)	280, 304, 992
PspCI	CACGTG	1 cut(s)	1426
PspFI	CCCAGC	1 cut(s)	120
PspGI	CCWGG	3 cut(s)	280, 304, 992
PspPI	GGNCC	5 cut(s)	155, 340, 896, 1443, 1640
PspPPI	RGGWCCY	2 cut(s)	155, 896
PsrI	GAACNNNNNNTAC	2 cut(s)	305, 337
PstNI	CAGNNNCTG	1 cut(s)	648
PsuI	RGATCY	2 cut(s)	58, 684
PsyI	GACNNNGTC	2 cut(s)	557, 1169
PvuII	CAGCTG	1 cut(s)	1208
RsaI	GTAC	6 cut(s)	323, 491, 1151, 1181, 1514, 1574
RsaNI	GTAC	6 cut(s)	322, 490, 1150, 1180, 1513, 1573
RseI	CAYNNNNRTG	3 cut(s)	377, 1023, 1320
SapI	GCTCTTC	1 cut(s)	1292
SaqAI	TTAA	4 cut(s)	165, 417, 567, 1645
SatI	GCNGC	4 cut(s)	990, 1088, 1344, 1446
Sau3AI	GATC	5 cut(s)	58, 432, 451, 684, 1224
Sau96I	GGNCC	5 cut(s)	155, 340, 896, 1443, 1640
ScaI	AGTACT	1 cut(s)	1151
SchI	GAGTC	4 cut(s)	123, 654, 758, 1116
ScrFI	CCNGG	7 cut(s)	153, 282, 306, 624, 994, 1262, 1434
SduI	GDGCHC	4 cut(s)	296, 606, 1203, 1369
SfaNI	GCATC	4 cut(s)	772, 1324, 1569, 1614
SinI	GGWCC	3 cut(s)	155, 340, 896
SmiMI	CAYNNNNRTG	3 cut(s)	377, 1023, 1320
SmlI	CTYRAG	4 cut(s)	662, 1005, 1136, 1486
SmoI	CTYRAG	4 cut(s)	662, 1005, 1136, 1486
Sse9I	AATT	2 cut(s)	259, 521
SseBI	AGGCCT	2 cut(s)	550, 997
SsiI	CCGC	8 cut(s)	375, 412, 900, 958, 1042, 1163, 1341, 1446
SspI	AATATT	1 cut(s)	7
SspMI	CTAG	2 cut(s)	110, 1517
StuI	AGGCCT	2 cut(s)	550, 997
StyD4I	CCNGG	7 cut(s)	151, 280, 304, 622, 992, 1260, 1432
StyI	CCWWGG	4 cut(s)	109, 540, 688, 1516
TaaI	ACNGT	6 cut(s)	422, 472, 557, 863, 890, 1420
TaiI	ACGT	3 cut(s)	323, 732, 1428
TaqI	TCGA	2 cut(s)	877, 1464
TasI	AATT	2 cut(s)	259, 521
TatI	WGTACW	2 cut(s)	1149, 1572
TauI	GCSGC	1 cut(s)	1448
TfiI	GAWTC	3 cut(s)	243, 840, 1326
Tru1I	TTAA	4 cut(s)	165, 417, 567, 1645
Tru9I	TTAA	4 cut(s)	165, 417, 567, 1645
TscAI	CASTG	3 cut(s)	601, 985, 991
TseFI	GTSAC	1 cut(s)	790
TseI	GCWGC	3 cut(s)	989, 1087, 1343
Tsp45I	GTSAC	1 cut(s)	790
TspDTI	ATGAA	5 cut(s)	17, 38, 231, 252, 716
TspRI	CASTG	3 cut(s)	601, 985, 991
Tth111I	GACNNNGTC	2 cut(s)	557, 1169
VpaK11BI	GGWCC	3 cut(s)	155, 340, 896
VspI	ATTAAT	1 cut(s)	567
XagI	CCTNNNNNAGG	1 cut(s)	544
XapI	RAATTY	1 cut(s)	259
XmaJI	CCTAGG	2 cut(s)	109, 1516
XspI	CTAG	2 cut(s)	110, 1517
ZrmI	AGTACT	1 cut(s)	1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.