Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Forward (+)

60144 .. 62540

Gene Structure 2397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1000300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTCTGGGATGATGCTTATGCTGCTGCTATGCCTTTCAGTGGGGACAATGTCGGTAGTCCACTGTGGAGATCCTACCATTTTCTTCACATGGAACGTGACCTACGGAACCCTCTCACCCCTCGGAGTTCCCCAGCAAGTCATTCTCATAAATGGCCAATTTCCTGGACCCAACATCAACTCCACCACCAACAACAACGTTATCGTCAACGTCTTCAATAACCTTGACGAGCCATTCCTCATCACATGGGTGGGTGTCCAGCAGAGGAAGAATTCATGGCAAGATGGAGTTCTTGGAACCATGTGCCCCATCCCCCCCGGAACGAACTACACCTACAAATTCCAAGTCAAGGATCAGATTGGGAGCTTCATGTACTACCCTGTAACGGCCATGCATAGGGCAGCCGGTGGCTTTGGAGGCCTCCGCATCAACAGCCGTAATTTGATTCCCGTTCCTTACGCTGCTCCCGAGGATGATTACACTGTCATGATCGGTGACTGGTACTCCAAAAGCCATAGTCAACTCAAGAAATTCTTGGATAGCGGCCGCGCCATGGCCAGGCCTGACGGCGTCCTCATTAACGGCAAATCAGCAAAAGGAGATGGCAAGGACGAGCCCCTCTTCACCATGAAGGCTGGCAAAACTTACAAGTACAGGATCTGCAACGTGGGGCTCAAGAACTCCCTCAACTTTAGGATACAAGGCCACCAAATGAAGCTTGTTGAGACGGAGGGCTCCCACACCGTCCAAAACACCTACGATTCGCTTGATGTGCATATTGGCCAATGCTTCGCGGTGCTTGTCACAGCCGACAAGGAGCCCAAGGACTACTATATGGTGGCTTCCACCCGATTCTCCAAGAGCGTGCTCACCGGCAAAGGCATCATCCGCTACGAAAATGGTAAGGGACCCGCCTCCCCTGAAGTCCCCAAGGCTCCAGTGGGATGGGCCTGGTCTCTCAACCAGTTCCGTTCCTTCCGCTGGAACCTCACTGCCAGCGCTGCCAGGCCTAACCCTCAGGGCTCCTACCACTATGGAAAGATTAACATCACCCGCACCATCAAGCTCATCAACTCTGCTAGCAAGGCCGACGGGAAGCTTCGCTATGCCATCAACGGAATCTCCCACGTGGACCCTGAAACCCCACTCAAGTTGGCCGACTACTATGGAATCCGTGAGAAGGTCTTCAAGTTCGACACCATGAAGGTTGATCCCCAATCGACACCTGCAGAAAAGATCACCATGGAACCCAATGTTCTTAATATAACAATCAAAGACTTCGTGGAGATCATCTTTGAGAACCCCGAGAAGAGCCTCCAGACATGGCATTTGAACGGATACTCCTTCTTCGCTGTCGCCGTGGAGCCCGGGAAGTGGACCCCAGAAAAGAGGAAGAACTACAACCTTCTCGACGCCTTGAGCAGGCACACCATCCAAGTGTTCCCCAAATCTTGGGCTGCCATCCTGCTGACATTCGACAACGCCGGAATGTGGAATCTTAGGTCAGAGCAGCCGGAGAGGCGCTACCTAGGACAACAGCTCTACGTGGGAGTTGAAAATATTAAACGCTCCCTCAGGAATGAGTACAACATGCCAGACACTGCCCTTGTCTGTGGCCTCGTCAAGGGCATGCCTAAGCCCCCGCCTTACAGCACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

553

Amino Acids

61.91

Weight (kDa)

9.32

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 147	5e-41	Multicopper oxidase
Cu-oxidase	PF00394	158 - 300	1.1e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	381 - 519	9.9e-27	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1234
Acc36I	ACCTGC	1 cut(s)	1234
AccB7I	CCANNNNNTGG	1 cut(s)	1452
AccII	CGCG	2 cut(s)	549, 794
AciI	CCGC	9 cut(s)	424, 543, 547, 794, 889, 912, 979, 1054, 1643
AclI	AACGTT	1 cut(s)	198
AclWI	GGATC	4 cut(s)	65, 360, 665, 1205
AcoI	YGGCCR	6 cut(s)	154, 387, 544, 555, 781, 1155
AcsI	RAATTY	3 cut(s)	271, 338, 530
AcuI	CTGAAG	1 cut(s)	942
AcvI	CACGTG	1 cut(s)	1129
AcyI	GRCGYC	2 cut(s)	570, 1413
AfaI	GTAC	4 cut(s)	374, 503, 653, 1586
AfeI	AGCGCT	1 cut(s)	1000
AgsI	TTSAA	4 cut(s)	217, 1189, 1333, 1556
AjnI	CCWGG	4 cut(s)	163, 557, 950, 1004
AleI	CACNNNNGTG	1 cut(s)	248
AloI	GAACNNNNNNTCC	2 cut(s)	1325, 1357
AluBI	AGCT	5 cut(s)	366, 718, 1066, 1099, 1540
AluI	AGCT	5 cut(s)	366, 718, 1066, 1099, 1540
Alw21I	GWGCWC	1 cut(s)	870
Alw26I	GTCTC	2 cut(s)	719, 960
AlwI	GGATC	4 cut(s)	65, 360, 665, 1205
AlwNI	CAGNNNCTG	2 cut(s)	660, 1601
Ama87I	CYCGRG	3 cut(s)	467, 1304, 1367
Aor51HI	AGCGCT	1 cut(s)	1000
ApeKI	GCWGC	7 cut(s)	22, 25, 401, 461, 1001, 1457, 1510
ApoI	RAATTY	3 cut(s)	271, 338, 530
ArsI	GACNNNNNNTTYG	4 cut(s)	330, 362, 1312, 1344
Asp700I	GAANNNNTTC	1 cut(s)	1184
AspA2I	CCTAGG	1 cut(s)	1528
AspLEI	GCGC	3 cut(s)	551, 1001, 1524
AspS9I	GGNCC	5 cut(s)	167, 908, 948, 1132, 1377
AsuC2I	CCSGG	3 cut(s)	318, 1368, 1369
AsuHPI	GGTGA	6 cut(s)	108, 506, 616, 862, 1042, 1231
AsuNHI	GCTAGC	1 cut(s)	1079
AvaI	CYCGRG	3 cut(s)	467, 1304, 1367
AvaII	GGWCC	4 cut(s)	167, 908, 1132, 1377
AvrII	CCTAGG	1 cut(s)	1528
AxyI	CCTNAGG	2 cut(s)	1017, 1574
BaeGI	GKGCMC	1 cut(s)	308
BalI	TGGCCA	3 cut(s)	156, 557, 783
BanII	GRGCYC	6 cut(s)	618, 675, 737, 822, 1025, 1368
BbrPI	CACGTG	1 cut(s)	1129
BbsI	GAAGAC	2 cut(s)	205, 1177
Bbv12I	GWGCWC	1 cut(s)	870
BbvI	GCAGC	7 cut(s)	9, 12, 413, 448, 988, 1444, 1522
BccI	CCATC	8 cut(s)	278, 317, 596, 939, 1067, 1118, 1439, 1469
BceAI	ACGGC	5 cut(s)	402, 420, 583, 598, 1343
BciT130I	CCWGG	4 cut(s)	165, 559, 952, 1006
BciVI	GTATCC	2 cut(s)	690, 1331
BcnI	CCSGG	3 cut(s)	318, 1368, 1369
BcoDI	GTCTC	2 cut(s)	719, 960
BfaI	CTAG	2 cut(s)	1080, 1529
BfmI	CTRYAG	1 cut(s)	1227
BfoI	RGCGCY	2 cut(s)	1002, 1525
BfuAI	ACCTGC	1 cut(s)	1234
BfuI	GTATCC	2 cut(s)	690, 1331
BglI	GCCNNNNNGGC	1 cut(s)	1519
BisI	GCNGC	9 cut(s)	23, 26, 402, 462, 544, 547, 1002, 1458, 1511
BlnI	CCTAGG	1 cut(s)	1528
BlsI	GCNGC	9 cut(s)	24, 27, 403, 463, 545, 548, 1003, 1459, 1512
Bme1390I	CCNGG	7 cut(s)	165, 318, 559, 952, 1006, 1368, 1369
Bme18I	GGWCC	4 cut(s)	167, 908, 1132, 1377
BmeT110I	CYCGRG	3 cut(s)	467, 1304, 1367
BmgT120I	GGNCC	5 cut(s)	167, 908, 948, 1132, 1377
BmrFI	CCNGG	7 cut(s)	165, 318, 559, 952, 1006, 1368, 1369
BmsI	GCATC	3 cut(s)	3, 435, 891
BmtI	GCTAGC	1 cut(s)	1083
BpiI	GAAGAC	2 cut(s)	205, 1177
BpmI	CTGGAG	2 cut(s)	921, 1301
Bpu10I	CCTNAGC	1 cut(s)	1635
BpuEI	CTTGAG	4 cut(s)	509, 659, 1133, 1438
BpuMI	CCSGG	3 cut(s)	318, 1368, 1369
BsaAI	YACGTR	3 cut(s)	1129, 1546, 1656
BsaBI	GATNNNNATC	1 cut(s)	1046
BsaHI	GRCGYC	2 cut(s)	570, 1413
BsaI	GGTCTC	1 cut(s)	960
BsaXI	ACNNNNNCTCC	8 cut(s)	164, 194, 488, 518, 1106, 1136, 1325, 1355
Bse118I	RCCGGY	2 cut(s)	404, 872
Bse1I	ACTGG	3 cut(s)	503, 938, 964
Bse21I	CCTNAGG	2 cut(s)	1017, 1574
Bse8I	GATNNNNATC	1 cut(s)	1046
BseBI	CCWGG	4 cut(s)	165, 559, 952, 1006
BseGI	GGATG	7 cut(s)	15, 309, 478, 885, 950, 1431, 1461
BseJI	GATNNNNATC	1 cut(s)	1046
BseMII	CTCAG	2 cut(s)	1031, 1588
BseNI	ACTGG	3 cut(s)	503, 938, 964
BseSI	GKGCMC	1 cut(s)	308
BseX3I	CGGCCG	1 cut(s)	544
BseXI	GCAGC	7 cut(s)	9, 12, 413, 448, 988, 1444, 1522
BseYI	CCCAGC	1 cut(s)	132
Bsh1236I	CGCG	2 cut(s)	549, 794
Bsh1285I	CGRYCG	1 cut(s)	547
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	1 cut(s)	870
BsiHKCI	CYCGRG	3 cut(s)	467, 1304, 1367
BsiSI	CCGG	6 cut(s)	318, 405, 873, 1368, 1485, 1514
BslFI	GGGAC	3 cut(s)	58, 911, 921
BsmAI	GTCTC	2 cut(s)	719, 960
BsmBI	CGTCTC	1 cut(s)	719
BsmFI	GGGAC	3 cut(s)	58, 911, 921
Bso31I	GGTCTC	1 cut(s)	960
BsoBI	CYCGRG	3 cut(s)	467, 1304, 1367
Bsp1286I	GDGCHC	8 cut(s)	308, 618, 675, 737, 822, 870, 1025, 1368
Bsp143I	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
Bsp19I	CCATGG	2 cut(s)	552, 1242
BspACI	CCGC	9 cut(s)	424, 543, 547, 794, 889, 912, 979, 1054, 1643
BspCNI	CTCAG	2 cut(s)	1030, 1587
BspFNI	CGCG	2 cut(s)	549, 794
BspHI	TCATGA	1 cut(s)	486
BspMAI	CTGCAG	1 cut(s)	1231
BspMI	ACCTGC	1 cut(s)	1234
BspOI	GCTAGC	1 cut(s)	1083
BspPI	GGATC	4 cut(s)	65, 360, 665, 1205
BspQI	GCTCTTC	1 cut(s)	1304
BspTNI	GGTCTC	1 cut(s)	960
BsrFI	RCCGGY	2 cut(s)	404, 872
BsrI	ACTGG	3 cut(s)	503, 938, 964
BssAI	RCCGGY	2 cut(s)	404, 872
BssMI	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
BssNI	GRCGYC	2 cut(s)	570, 1413
BssT1I	CCWWGG	5 cut(s)	552, 822, 930, 1242, 1528
Bst2UI	CCWGG	4 cut(s)	165, 559, 952, 1006
Bst4CI	ACNGT	3 cut(s)	65, 484, 745
Bst6I	CTCTTC	2 cut(s)	626, 1304
BstACI	GRCGYC	2 cut(s)	570, 1413
BstBAI	YACGTR	3 cut(s)	1129, 1546, 1656
BstC8I	GCNNGC	6 cut(s)	637, 866, 997, 1081, 1424, 1631
BstDEI	CTNAG	4 cut(s)	1017, 1499, 1574, 1635
BstDSI	CCRYGG	3 cut(s)	552, 1242, 1359
BstENI	CCTNNNNNAGG	2 cut(s)	1420, 1622
BstF5I	GGATG	7 cut(s)	15, 309, 478, 885, 950, 1431, 1461
BstFNI	CGCG	2 cut(s)	549, 794
BstH2I	RGCGCY	2 cut(s)	1002, 1525
BstHHI	GCGC	3 cut(s)	551, 1001, 1524
BstKTI	GATC	7 cut(s)	73, 355, 492, 660, 1213, 1239, 1290
BstMAI	GTCTC	2 cut(s)	719, 960
BstMBI	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	8 cut(s)	22, 417, 432, 772, 888, 1001, 1085, 1519
BstNI	CCWGG	4 cut(s)	165, 559, 952, 1006
BstNSI	RCATGY	2 cut(s)	1594, 1633
BstSCI	CCNGG	7 cut(s)	163, 316, 557, 950, 1004, 1366, 1367
BstSFI	CTRYAG	1 cut(s)	1227
BstSLI	GKGCMC	1 cut(s)	308
BstUI	CGCG	2 cut(s)	549, 794
BstV1I	GCAGC	7 cut(s)	9, 12, 413, 448, 988, 1444, 1522
BstV2I	GAAGAC	2 cut(s)	205, 1177
BstX2I	RGATCY	2 cut(s)	70, 657
BstXI	CCANNNNNNTGG	2 cut(s)	164, 945
BstYI	RGATCY	2 cut(s)	70, 657
BstZI	CGGCCG	1 cut(s)	544
Bsu36I	CCTNAGG	2 cut(s)	1017, 1574
BsuI	GTATCC	2 cut(s)	690, 1331
BtgI	CCRYGG	3 cut(s)	552, 1242, 1359
BtsCI	GGATG	7 cut(s)	15, 309, 478, 885, 950, 1431, 1461
BtsI	GCAGTG	2 cut(s)	990, 1599
BtsIMutI	CAGTG	6 cut(s)	45, 61, 480, 945, 990, 1599
BveI	ACCTGC	1 cut(s)	1234
Cac8I	GCNNGC	6 cut(s)	637, 866, 997, 1081, 1424, 1631
CaiI	CAGNNNCTG	2 cut(s)	660, 1601
CciI	TCATGA	1 cut(s)	486
CciNI	GCGGCCGC	1 cut(s)	544
CfoI	GCGC	3 cut(s)	551, 1001, 1524
Cfr10I	RCCGGY	2 cut(s)	404, 872
Cfr13I	GGNCC	5 cut(s)	167, 908, 948, 1132, 1377
Cfr9I	CCCGGG	1 cut(s)	1367
CseI	GACGC	2 cut(s)	559, 1421
Csp6I	GTAC	4 cut(s)	373, 502, 652, 1585
CspCI	CAANNNNNGTGG	2 cut(s)	1134, 1169
CviQI	GTAC	4 cut(s)	373, 502, 652, 1585
DdeI	CTNAG	4 cut(s)	1017, 1499, 1574, 1635
DpnI	GATC	7 cut(s)	72, 354, 491, 659, 1212, 1238, 1289
DpnII	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
EaeI	YGGCCR	6 cut(s)	154, 387, 544, 555, 781, 1155
EagI	CGGCCG	1 cut(s)	544
Eam1104I	CTCTTC	2 cut(s)	626, 1304
EarI	CTCTTC	2 cut(s)	626, 1304
EclXI	CGGCCG	1 cut(s)	544
Eco130I	CCWWGG	5 cut(s)	552, 822, 930, 1242, 1528
Eco147I	AGGCCT	3 cut(s)	420, 562, 1009
Eco24I	GRGCYC	6 cut(s)	618, 675, 737, 822, 1025, 1368
Eco31I	GGTCTC	1 cut(s)	960
Eco47I	GGWCC	4 cut(s)	167, 908, 1132, 1377
Eco47III	AGCGCT	1 cut(s)	1000
Eco52I	CGGCCG	1 cut(s)	544
Eco57I	CTGAAG	1 cut(s)	942
Eco72I	CACGTG	1 cut(s)	1129
Eco81I	CCTNAGG	2 cut(s)	1017, 1574
Eco88I	CYCGRG	3 cut(s)	467, 1304, 1367
EcoNI	CCTNNNNNAGG	2 cut(s)	1420, 1622
EcoO109I	RGGNCCY	1 cut(s)	908
EcoRI	GAATTC	1 cut(s)	271
EcoRII	CCWGG	4 cut(s)	163, 557, 950, 1004
EcoT14I	CCWWGG	5 cut(s)	552, 822, 930, 1242, 1528
EcoT22I	ATGCAT	1 cut(s)	396
EcoT38I	GRGCYC	6 cut(s)	618, 675, 737, 822, 1025, 1368
ErhI	CCWWGG	5 cut(s)	552, 822, 930, 1242, 1528
Esp3I	CGTCTC	1 cut(s)	719
FalI	AAGNNNNNCTT	2 cut(s)	518, 550
FaqI	GGGAC	3 cut(s)	58, 911, 921
FauI	CCCGC	3 cut(s)	919, 1061, 1650
Fnu4HI	GCNGC	9 cut(s)	23, 26, 402, 462, 544, 547, 1002, 1458, 1511
FokI	GGATG	7 cut(s)	22, 296, 485, 872, 957, 1418, 1448
FriOI	GRGCYC	6 cut(s)	618, 675, 737, 822, 1025, 1368
Fsp4HI	GCNGC	9 cut(s)	23, 26, 402, 462, 544, 547, 1002, 1458, 1511
FspBI	CTAG	2 cut(s)	1080, 1529
GlaI	GCGC	3 cut(s)	550, 1000, 1523
GluI	GCNGC	9 cut(s)	23, 26, 402, 462, 544, 547, 1002, 1458, 1511
GsaI	CCCAGC	1 cut(s)	136
GsuI	CTGGAG	2 cut(s)	921, 1301
HaeII	RGCGCY	2 cut(s)	1002, 1525
HapII	CCGG	6 cut(s)	318, 405, 873, 1368, 1485, 1514
HgaI	GACGC	2 cut(s)	559, 1421
HhaI	GCGC	3 cut(s)	551, 1001, 1524
Hin1I	GRCGYC	2 cut(s)	570, 1413
Hin6I	GCGC	3 cut(s)	549, 999, 1522
HinP1I	GCGC	3 cut(s)	549, 999, 1522
HincII	GTYRAC	2 cut(s)	208, 521
HindII	GTYRAC	2 cut(s)	208, 521
HindIII	AAGCTT	2 cut(s)	716, 1097
HinfI	GANTC	6 cut(s)	445, 761, 852, 1119, 1170, 1495
HpaII	CCGG	6 cut(s)	318, 405, 873, 1368, 1485, 1514
HphI	GGTGA	6 cut(s)	108, 506, 616, 862, 1042, 1231
Hpy166II	GTNNAC	5 cut(s)	61, 208, 521, 1132, 1377
Hpy188I	TCNGA	3 cut(s)	125, 357, 1507
Hpy188III	TCNNGA	7 cut(s)	467, 487, 526, 676, 1318, 1409, 1576
Hpy8I	GTNNAC	5 cut(s)	61, 208, 521, 1132, 1377
Hpy99I	CGWCG	2 cut(s)	1094, 1415
HpyAV	CCTTC	6 cut(s)	625, 985, 1174, 1198, 1354, 1415
HpyCH4III	ACNGT	3 cut(s)	65, 484, 745
HpyCH4IV	ACGT	7 cut(s)	96, 198, 210, 666, 1128, 1545, 1655
HpyCH4V	TGCA	4 cut(s)	394, 663, 775, 1229
HpyF10VI	GCNNNNNNNGC	8 cut(s)	22, 417, 432, 772, 888, 1001, 1085, 1519
HpyF3I	CTNAG	4 cut(s)	1017, 1499, 1574, 1635
HpySE526I	ACGT	7 cut(s)	96, 198, 210, 666, 1128, 1545, 1655
Hsp92I	GRCGYC	2 cut(s)	570, 1413
HspAI	GCGC	3 cut(s)	549, 999, 1522
KflI	GGGWCCC	1 cut(s)	908
Kzo9I	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
LguI	GCTCTTC	1 cut(s)	1304
LmnI	GCTCC	8 cut(s)	363, 469, 740, 817, 940, 1028, 1363, 1574
Lsp1109I	GCAGC	7 cut(s)	9, 12, 413, 448, 988, 1444, 1522
LweI	GCATC	3 cut(s)	3, 435, 891
MaeI	CTAG	2 cut(s)	1080, 1529
MaeII	ACGT	7 cut(s)	96, 198, 210, 666, 1128, 1545, 1655
MaeIII	GTNAC	4 cut(s)	97, 382, 494, 802
MalI	GATC	7 cut(s)	72, 354, 491, 659, 1212, 1238, 1289
MboI	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
MboII	GAAGA	8 cut(s)	76, 205, 280, 613, 1177, 1321, 1339, 1405
MflI	RGATCY	2 cut(s)	70, 657
MhlI	GDGCHC	8 cut(s)	308, 618, 675, 737, 822, 870, 1025, 1368
MlsI	TGGCCA	3 cut(s)	156, 557, 783
MluCI	AATT	5 cut(s)	158, 271, 338, 439, 530
MluNI	TGGCCA	3 cut(s)	156, 557, 783
Mox20I	TGGCCA	3 cut(s)	156, 557, 783
Mph1103I	ATGCAT	1 cut(s)	396
MroXI	GAANNNNTTC	1 cut(s)	1184
MscI	TGGCCA	3 cut(s)	156, 557, 783
MseI	TTAA	4 cut(s)	579, 1044, 1260, 1563
MslI	CAYNNNNRTG	3 cut(s)	248, 485, 1436
Msp20I	TGGCCA	3 cut(s)	156, 557, 783
MspA1I	CMGCKG	1 cut(s)	981
MspI	CCGG	6 cut(s)	318, 405, 873, 1368, 1485, 1514
MspR9I	CCNGG	7 cut(s)	165, 318, 559, 952, 1006, 1368, 1369
MvaI	CCWGG	4 cut(s)	165, 559, 952, 1006
MvnI	CGCG	2 cut(s)	549, 794
MwoI	GCNNNNNNNGC	8 cut(s)	22, 417, 432, 772, 888, 1001, 1085, 1519
NciI	CCSGG	3 cut(s)	318, 1368, 1369
NcoI	CCATGG	2 cut(s)	552, 1242
NdeII	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
NheI	GCTAGC	1 cut(s)	1079
NmuCI	GTSAC	3 cut(s)	97, 494, 802
NotI	GCGGCCGC	1 cut(s)	544
NsiI	ATGCAT	1 cut(s)	396
NspI	RCATGY	2 cut(s)	1594, 1633
OliI	CACNNNNGTG	1 cut(s)	248
PaeI	GCATGC	1 cut(s)	1633
PagI	TCATGA	1 cut(s)	486
PaqCI	CACCTGC	1 cut(s)	1234
PceI	AGGCCT	3 cut(s)	420, 562, 1009
PciSI	GCTCTTC	1 cut(s)	1304
PcsI	WCGNNNNNNNCGW	2 cut(s)	465, 1356
PdmI	GAANNNNTTC	1 cut(s)	1184
PfeI	GAWTC	6 cut(s)	445, 761, 852, 1119, 1170, 1495
PflFI	GACNNNGTC	2 cut(s)	49, 569
PflMI	CCANNNNNTGG	1 cut(s)	1452
PfoI	TCCNGGA	1 cut(s)	163
PkrI	GCNGC	9 cut(s)	24, 27, 403, 463, 545, 548, 1003, 1459, 1512
PmaCI	CACGTG	1 cut(s)	1129
PmlI	CACGTG	1 cut(s)	1129
Ppu21I	YACGTR	3 cut(s)	1129, 1546, 1656
PpuMI	RGGWCCY	1 cut(s)	908
Psp1406I	AACGTT	1 cut(s)	198
Psp5II	RGGWCCY	1 cut(s)	908
Psp6I	CCWGG	4 cut(s)	163, 557, 950, 1004
PspCI	CACGTG	1 cut(s)	1129
PspFI	CCCAGC	1 cut(s)	132
PspGI	CCWGG	4 cut(s)	163, 557, 950, 1004
PspPI	GGNCC	5 cut(s)	167, 908, 948, 1132, 1377
PspPPI	RGGWCCY	1 cut(s)	908
PsrI	GAACNNNNNNTAC	4 cut(s)	86, 118, 317, 349
PstI	CTGCAG	1 cut(s)	1231
PstNI	CAGNNNCTG	2 cut(s)	660, 1601
PsuI	RGATCY	2 cut(s)	70, 657
PsyI	GACNNNGTC	2 cut(s)	49, 569
RsaI	GTAC	4 cut(s)	374, 503, 653, 1586
RsaNI	GTAC	4 cut(s)	373, 502, 652, 1585
RseI	CAYNNNNRTG	3 cut(s)	248, 485, 1436
SapI	GCTCTTC	1 cut(s)	1304
SaqAI	TTAA	4 cut(s)	579, 1044, 1260, 1563
SatI	GCNGC	9 cut(s)	23, 26, 402, 462, 544, 547, 1002, 1458, 1511
Sau3AI	GATC	7 cut(s)	70, 352, 489, 657, 1210, 1236, 1287
Sau96I	GGNCC	5 cut(s)	167, 908, 948, 1132, 1377
ScrFI	CCNGG	7 cut(s)	165, 318, 559, 952, 1006, 1368, 1369
SduI	GDGCHC	8 cut(s)	308, 618, 675, 737, 822, 870, 1025, 1368
SfaNI	GCATC	3 cut(s)	3, 435, 891
SfcI	CTRYAG	1 cut(s)	1227
SinI	GGWCC	4 cut(s)	167, 908, 1132, 1377
SmaI	CCCGGG	1 cut(s)	1369
SmiMI	CAYNNNNRTG	3 cut(s)	248, 485, 1436
SmlI	CTYRAG	4 cut(s)	524, 674, 1148, 1417
SmoI	CTYRAG	4 cut(s)	524, 674, 1148, 1417
SphI	GCATGC	1 cut(s)	1633
Sse9I	AATT	5 cut(s)	158, 271, 338, 439, 530
SseBI	AGGCCT	3 cut(s)	420, 562, 1009
SsiI	CCGC	9 cut(s)	424, 543, 547, 794, 889, 912, 979, 1054, 1643
SspI	AATATT	1 cut(s)	1561
SspMI	CTAG	2 cut(s)	1080, 1529
StuI	AGGCCT	3 cut(s)	420, 562, 1009
StyD4I	CCNGG	7 cut(s)	163, 316, 557, 950, 1004, 1366, 1367
StyI	CCWWGG	5 cut(s)	552, 822, 930, 1242, 1528
TaaI	ACNGT	3 cut(s)	65, 484, 745
TaiI	ACGT	7 cut(s)	99, 201, 213, 669, 1131, 1548, 1658
TaqI	TCGA	4 cut(s)	1194, 1220, 1410, 1476
TasI	AATT	5 cut(s)	158, 271, 338, 439, 530
TatI	WGTACW	3 cut(s)	372, 651, 1584
TauI	GCSGC	2 cut(s)	546, 549
TfiI	GAWTC	6 cut(s)	445, 761, 852, 1119, 1170, 1495
Tru1I	TTAA	4 cut(s)	579, 1044, 1260, 1563
Tru9I	TTAA	4 cut(s)	579, 1044, 1260, 1563
TscAI	CASTG	6 cut(s)	45, 68, 487, 945, 997, 1606
TseFI	GTSAC	3 cut(s)	97, 494, 802
TseI	GCWGC	7 cut(s)	22, 25, 401, 461, 1001, 1457, 1510
Tsp45I	GTSAC	3 cut(s)	97, 494, 802
TspDTI	ATGAA	5 cut(s)	264, 358, 644, 728, 1217
TspGWI	ACGGA	6 cut(s)	120, 743, 959, 1131, 1163, 1350
TspMI	CCCGGG	1 cut(s)	1367
TspRI	CASTG	6 cut(s)	45, 68, 487, 945, 997, 1606
Tth111I	GACNNNGTC	2 cut(s)	49, 569
Van91I	CCANNNNNTGG	1 cut(s)	1452
VpaK11BI	GGWCC	4 cut(s)	167, 908, 1132, 1377
XagI	CCTNNNNNAGG	2 cut(s)	1420, 1622
XapI	RAATTY	3 cut(s)	271, 338, 530
XceI	RCATGY	2 cut(s)	1594, 1633
XcmI	CCANNNNNNNNNTGG	1 cut(s)	937
XmaI	CCCGGG	1 cut(s)	1367
XmaJI	CCTAGG	1 cut(s)	1528
XmnI	GAANNNNTTC	1 cut(s)	1184
XspI	CTAG	2 cut(s)	1080, 1529
Zsp2I	ATGCAT	1 cut(s)	396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.