Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Forward (+)

4354923 .. 4357482

Gene Structure 2560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G13400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCAGGGTGGTAGGCTTTTGACGGTGTTGGTGTGCCTCGCCTCCACGGTGGCGTTGGTGAGCGCCGGTGACCCTTACTTCTACTACACGTGGAACGTAACCTACGGAACCGCCGCGCCTCTCGGAATTCCTCAACAGGTGATTCTCATCAACGGACAGTTCCCTGGTCCTAACCTAAACTCAACCTCCAACAACAATGTCGTCATCAATGTCTTCAACAACCTCGACGAGCCTTTCCTCTTGACCTGGAGTGGACTCCAGCACAGGAAGAACTCATGGCAAGATGGTGTGACTGGGACCTCATGCCCAATCCCAGCAGGCACCAACTTCACTTACCATTTCCAGCCTAAGGACCAGATCGGTAGCTACTTCTACTACCCATCCACCGCTCTCCACCGCTTCGCCGGTGGTTTCGGTGGCCTCCGTGTCAACAGCCGTCTCCTCATCCCAGTCCCATACGCTGACCCCGAAGACGACCGCACCATCCTCATCAACGACTGGTACGCCAAGAGCCACACCGCCCTCAAGAACTTCCTTGACAGCGGACGTACTCTAGGATCCCCCGACGGTGTTCTCATCAATGGGAAATCTGGTAAACTAGGCGGAAACAACGCTCCTCTCTTCACCATGAAGCCCGGAAAGACTTACAAGTACAGGATCTGCAATGTTGGATTCAAATCCACTCTTAACTTCAGGATCCAAGGACACAAGATGAAGCTTGTTGAGATGGAAGGCTCCCACGTTCTCCAGAACGACTACGACTCTCTTGATGTCCACGTTGGACAGTGCTTCGCCGTTCTAGTGACCGCTGACCAAGTGGCCAAGAACTACTACATGGTTGCATCCACTAGGTTCCTCAAGAAGGAAGTGAGCACTGTTGGTGTGATGAGCTACGAAGGAAGCAACGTTCAGGCTTCAAGCGATATCCCCAAGGCTCCCGTCGGCTGGGCTTGGTCTCTCAATCAGTTCAGATCCTTCAGATGGAACTTAACCGCCAGTGCTGCTAGACCTAACCCCCAGGGATCTTACCATTACGGAAAGATCAACATCACCCGTACCATCAAGCTCGCCAACACCAAGAATTTGGTGAATGGAAAGGTCAGGTTTGGATTCAACGGTGTATCACACGTTGACACCGAGACTCCCTTGAAGCTCGCTGAGTACTTCGGCATGTCCGAGAAGGTCTTCAAATACAACGTCATCAAGGACGAACCAGCAGCCAAGATCACAACACTAACCGTCGAGCCCAATGTCCTCAACATCACTTTCCGTACCTTTGTCGAAGTCGTCTTCGAGAACCACGAGAAAAGCATGCAATCCTTCCATTTGGACGGTTACTCCTTCTTCGCTGTCGCTTCCGAGCCAGGAAGATGGACACCAGAGAAGAGAAACAACTACAACTTGCTCGATGCCGTTAGCAGACACACCGTGCAGGTATACCCCAAATCCTGGTCAGCCATTCTCTTGACATTCGACAATGCCGGTATGTGGAACATCAGATCAGAGAACTGGGAGAGAAGATACTTGGGCCAGCAATTGTACGTCAGTGTTCTGTCCCCTGAAAAATCACTAAGAGACGAGTACAACATCCCACTCAACACCAACCTTTGCGGCATCGTCAAGGGCTTGCCATTACCTACACCCTACACTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

551

Amino Acids

61.65

Weight (kDa)

9.21

Isoelectric Point (pI)

34.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 146	9.3e-39	Multicopper oxidase
Cu-oxidase	PF00394	159 - 300	2.1e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	381 - 521	1.2e-31	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1423
AccB1I	GGYRCC	1 cut(s)	320
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccBSI	CCGCTC	1 cut(s)	389
AccI	GTMKAC	1 cut(s)	1437
AccII	CGCG	1 cut(s)	116
AclI	AACGTT	1 cut(s)	906
AclWI	GGATC	7 cut(s)	552, 565, 665, 691, 704, 966, 1030
AcoI	YGGCCR	1 cut(s)	819
AcsI	RAATTY	2 cut(s)	126, 1081
AcuI	CTGAAG	2 cut(s)	676, 961
AcvI	CACGTG	1 cut(s)	90
AdeI	CACNNNGTG	1 cut(s)	1429
AfaI	GTAC	8 cut(s)	503, 550, 653, 1057, 1163, 1273, 1541, 1583
AfiI	CCNNNNNNNGG	6 cut(s)	349, 862, 945, 981, 1449, 1488
AflIII	ACRYGT	2 cut(s)	87, 1126
AgsI	TTSAA	6 cut(s)	217, 676, 918, 1114, 1150, 1189
AjnI	CCWGG	5 cut(s)	163, 245, 1017, 1363, 1448
AloI	GAACNNNNNNTCC	2 cut(s)	891, 923
AluBI	AGCT	5 cut(s)	366, 718, 891, 1066, 1153
AluI	AGCT	5 cut(s)	366, 718, 891, 1066, 1153
Alw21I	GWGCWC	1 cut(s)	875
Alw26I	GTCTC	4 cut(s)	443, 960, 1133, 1569
AlwI	GGATC	7 cut(s)	552, 565, 665, 691, 704, 966, 1030
AlwNI	CAGNNNCTG	1 cut(s)	660
AoxI	GGCC	3 cut(s)	418, 819, 1528
ApeKI	GCWGC	2 cut(s)	1001, 1217
ApoI	RAATTY	2 cut(s)	126, 1081
ArsI	GACNNNNNNTTYG	2 cut(s)	1182, 1214
Asp700I	GAANNNNTTC	1 cut(s)	1184
AspLEI	GCGC	2 cut(s)	65, 118
AspS9I	GGNCC	4 cut(s)	167, 297, 352, 1528
AsuC2I	CCSGG	1 cut(s)	636
AsuHPI	GGTGA	6 cut(s)	70, 80, 151, 616, 1042, 1099
AvaII	GGWCC	3 cut(s)	167, 297, 352
AxyI	CCTNAGG	1 cut(s)	348
BalI	TGGCCA	1 cut(s)	821
BamHI	GGATCC	2 cut(s)	557, 696
BanI	GGYRCC	1 cut(s)	320
BanII	GRGCYC	1 cut(s)	1248
BauI	CACGAG	1 cut(s)	1301
BbrPI	CACGTG	1 cut(s)	90
BbsI	GAAGAC	4 cut(s)	205, 477, 1177, 1282
Bbv12I	GWGCWC	1 cut(s)	875
BbvI	GCAGC	2 cut(s)	988, 1229
BccI	CCATC	7 cut(s)	278, 388, 491, 721, 975, 1067, 1365
BceAI	ACGGC	3 cut(s)	420, 779, 1397
BciT130I	CCWGG	5 cut(s)	165, 247, 1019, 1365, 1450
BcnI	CCSGG	1 cut(s)	636
BcoDI	GTCTC	4 cut(s)	443, 960, 1133, 1569
BfaI	CTAG	5 cut(s)	554, 599, 800, 849, 1005
BfoI	RGCGCY	1 cut(s)	66
BfuAI	ACCTGC	1 cut(s)	1423
BisI	GCNGC	4 cut(s)	114, 1002, 1218, 1612
BlsI	GCNGC	4 cut(s)	115, 1003, 1219, 1613
BmcAI	AGTACT	1 cut(s)	1163
Bme1390I	CCNGG	6 cut(s)	165, 247, 636, 1019, 1365, 1450
Bme18I	GGWCC	3 cut(s)	167, 297, 352
BmgT120I	GGNCC	4 cut(s)	167, 297, 352, 1528
BmiI	GGNNCC	8 cut(s)	109, 298, 322, 559, 698, 736, 854, 936
BmrFI	CCNGG	6 cut(s)	165, 247, 636, 1019, 1365, 1450
BmrI	ACTGGG	3 cut(s)	303, 443, 1519
BmsI	GCATC	3 cut(s)	851, 1399, 1623
BmuI	ACTGGG	3 cut(s)	303, 443, 1519
BpiI	GAAGAC	4 cut(s)	205, 477, 1177, 1282
BpmI	CTGGAG	3 cut(s)	242, 268, 731
BpuEI	CTTGAG	2 cut(s)	509, 842
BpuMI	CCSGG	1 cut(s)	636
BsaAI	YACGTR	1 cut(s)	90
BsaBI	GATNNNNATC	3 cut(s)	146, 676, 1046
BsaI	GGTCTC	1 cut(s)	960
BsaJI	CCNNGG	6 cut(s)	45, 163, 700, 930, 1017, 1018
BsaXI	ACNNNNNCTCC	6 cut(s)	170, 200, 1126, 1156, 1322, 1352
Bsc4I	CCNNNNNNNGG	6 cut(s)	349, 862, 945, 981, 1449, 1488
Bse118I	RCCGGY	3 cut(s)	65, 404, 1481
Bse1I	ACTGG	5 cut(s)	298, 449, 503, 996, 1514
Bse21I	CCTNAGG	1 cut(s)	348
Bse3DI	GCAATG	1 cut(s)	670
Bse8I	GATNNNNATC	3 cut(s)	146, 676, 1046
BseBI	CCWGG	5 cut(s)	165, 247, 1019, 1365, 1450
BseDI	CCNNGG	6 cut(s)	45, 163, 700, 930, 1017, 1018
BseGI	GGATG	5 cut(s)	380, 444, 483, 842, 1587
BseJI	GATNNNNATC	3 cut(s)	146, 676, 1046
BseLI	CCNNNNNNNGG	6 cut(s)	349, 862, 945, 981, 1449, 1488
BseMI	GCAATG	1 cut(s)	670
BseMII	CTCAG	1 cut(s)	1149
BseNI	ACTGG	5 cut(s)	298, 449, 503, 996, 1514
BseRI	GAGGAG	2 cut(s)	431, 606
BseXI	GCAGC	2 cut(s)	988, 1229
BseYI	CCCAGC	2 cut(s)	313, 945
BsgI	GTGCAG	1 cut(s)	1451
Bsh1236I	CGCG	1 cut(s)	116
Bsh1285I	CGRYCG	1 cut(s)	478
BshFI	GGCC	3 cut(s)	420, 821, 1530
BshNI	GGYRCC	1 cut(s)	320
BsiEI	CGRYCG	1 cut(s)	478
BsiHKAI	GWGCWC	1 cut(s)	875
BsiSI	CCGG	4 cut(s)	66, 405, 636, 1482
BslFI	GGGAC	3 cut(s)	310, 437, 1540
BslI	CCNNNNNNNGG	6 cut(s)	349, 862, 945, 981, 1449, 1488
BsmAI	GTCTC	4 cut(s)	443, 960, 1133, 1569
BsmBI	CGTCTC	2 cut(s)	443, 1569
BsmFI	GGGAC	3 cut(s)	310, 437, 1540
BsnI	GGCC	3 cut(s)	420, 821, 1530
Bso31I	GGTCTC	1 cut(s)	960
Bsp1286I	GDGCHC	2 cut(s)	875, 1248
Bsp143I	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
BspANI	GGCC	3 cut(s)	420, 821, 1530
BspCNI	CTCAG	1 cut(s)	1150
BspFNI	CGCG	1 cut(s)	116
BspLI	GGNNCC	8 cut(s)	109, 298, 322, 559, 698, 736, 854, 936
BspMI	ACCTGC	1 cut(s)	1423
BspPI	GGATC	7 cut(s)	552, 565, 665, 691, 704, 966, 1030
BspT107I	GGYRCC	1 cut(s)	320
BspTNI	GGTCTC	1 cut(s)	960
BsrBI	CCGCTC	1 cut(s)	389
BsrDI	GCAATG	1 cut(s)	670
BsrFI	RCCGGY	3 cut(s)	65, 404, 1481
BsrI	ACTGG	5 cut(s)	298, 449, 503, 996, 1514
BssAI	RCCGGY	3 cut(s)	65, 404, 1481
BssECI	CCNNGG	6 cut(s)	45, 163, 700, 930, 1017, 1018
BssMI	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
BssNAI	GTATAC	1 cut(s)	1438
BssSI	CACGAG	1 cut(s)	1301
BssT1I	CCWWGG	2 cut(s)	700, 930
Bst1107I	GTATAC	1 cut(s)	1438
Bst2BI	CACGAG	1 cut(s)	1301
Bst2UI	CCWGG	5 cut(s)	165, 247, 1019, 1365, 1450
Bst6I	CTCTTC	2 cut(s)	626, 1379
BstBAI	YACGTR	1 cut(s)	90
BstC8I	GCNNGC	6 cut(s)	319, 1068, 1155, 1313, 1532, 1628
BstDEI	CTNAG	3 cut(s)	348, 1158, 1571
BstDSI	CCRYGG	1 cut(s)	45
BstEII	GGTNACC	1 cut(s)	68
BstENI	CCTNNNNNAGG	1 cut(s)	860
BstF5I	GGATG	5 cut(s)	380, 444, 483, 842, 1587
BstFNI	CGCG	1 cut(s)	116
BstH2I	RGCGCY	1 cut(s)	66
BstHHI	GCGC	2 cut(s)	65, 118
BstKTI	GATC	9 cut(s)	360, 560, 660, 699, 974, 1025, 1044, 1227, 1502
BstMAI	GTCTC	4 cut(s)	443, 960, 1133, 1569
BstMBI	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
BstMCI	CGRYCG	1 cut(s)	478
BstMWI	GCNNNNNNNGC	1 cut(s)	1001
BstNI	CCWGG	5 cut(s)	165, 247, 1019, 1365, 1450
BstNSI	RCATGY	2 cut(s)	1174, 1315
BstPI	GGTNACC	1 cut(s)	68
BstSCI	CCNGG	6 cut(s)	163, 245, 634, 1017, 1363, 1448
BstUI	CGCG	1 cut(s)	116
BstV1I	GCAGC	2 cut(s)	988, 1229
BstV2I	GAAGAC	4 cut(s)	205, 477, 1177, 1282
BstX2I	RGATCY	5 cut(s)	557, 657, 696, 971, 1022
BstXI	CCANNNNNNTGG	2 cut(s)	1084, 1371
BstYI	RGATCY	5 cut(s)	557, 657, 696, 971, 1022
BstZ17I	GTATAC	1 cut(s)	1438
Bsu36I	CCTNAGG	1 cut(s)	348
BsuRI	GGCC	3 cut(s)	420, 821, 1530
BtgI	CCRYGG	1 cut(s)	45
BtsCI	GGATG	5 cut(s)	380, 444, 483, 842, 1587
BtsIMutI	CAGTG	4 cut(s)	791, 873, 1003, 1552
BveI	ACCTGC	1 cut(s)	1423
Cac8I	GCNNGC	6 cut(s)	319, 1068, 1155, 1313, 1532, 1628
CaiI	CAGNNNCTG	1 cut(s)	660
CfoI	GCGC	2 cut(s)	65, 118
Cfr10I	RCCGGY	3 cut(s)	65, 404, 1481
Cfr13I	GGNCC	4 cut(s)	167, 297, 352, 1528
Csp6I	GTAC	8 cut(s)	502, 549, 652, 1056, 1162, 1272, 1540, 1582
CviAII	CATG	6 cut(s)	276, 303, 628, 835, 1171, 1312
CviQI	GTAC	8 cut(s)	502, 549, 652, 1056, 1162, 1272, 1540, 1582
DdeI	CTNAG	3 cut(s)	348, 1158, 1571
DpnI	GATC	9 cut(s)	359, 559, 659, 698, 973, 1024, 1043, 1226, 1501
DpnII	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
DraIII	CACNNNGTG	1 cut(s)	1429
EaeI	YGGCCR	1 cut(s)	819
Eam1104I	CTCTTC	2 cut(s)	626, 1379
EarI	CTCTTC	2 cut(s)	626, 1379
EciI	GGCGGA	1 cut(s)	618
Eco130I	CCWWGG	2 cut(s)	700, 930
Eco24I	GRGCYC	1 cut(s)	1248
Eco31I	GGTCTC	1 cut(s)	960
Eco32I	GATATC	1 cut(s)	925
Eco47I	GGWCC	3 cut(s)	167, 297, 352
Eco57I	CTGAAG	2 cut(s)	676, 961
Eco72I	CACGTG	1 cut(s)	90
Eco81I	CCTNAGG	1 cut(s)	348
Eco91I	GGTNACC	1 cut(s)	68
EcoNI	CCTNNNNNAGG	1 cut(s)	860
EcoO109I	RGGNCCY	1 cut(s)	297
EcoO65I	GGTNACC	1 cut(s)	68
EcoRI	GAATTC	1 cut(s)	126
EcoRII	CCWGG	5 cut(s)	163, 245, 1017, 1363, 1448
EcoRV	GATATC	1 cut(s)	925
EcoT14I	CCWWGG	2 cut(s)	700, 930
EcoT38I	GRGCYC	1 cut(s)	1248
ErhI	CCWWGG	2 cut(s)	700, 930
Esp3I	CGTCTC	2 cut(s)	443, 1569
FaeI	CATG	6 cut(s)	279, 306, 631, 838, 1174, 1315
FaiI	YATR	9 cut(s)	277, 304, 457, 629, 836, 1172, 1313, 1438, 1487
FaqI	GGGAC	3 cut(s)	310, 437, 1540
FatI	CATG	6 cut(s)	275, 302, 627, 834, 1170, 1311
FblI	GTMKAC	1 cut(s)	1437
Fnu4HI	GCNGC	4 cut(s)	114, 1002, 1218, 1612
FokI	GGATG	5 cut(s)	367, 431, 470, 829, 1574
FriOI	GRGCYC	1 cut(s)	1248
Fsp4HI	GCNGC	4 cut(s)	114, 1002, 1218, 1612
FspBI	CTAG	5 cut(s)	554, 599, 800, 849, 1005
GlaI	GCGC	2 cut(s)	64, 117
GluI	GCNGC	4 cut(s)	114, 1002, 1218, 1612
GsaI	CCCAGC	2 cut(s)	317, 949
GsuI	CTGGAG	3 cut(s)	242, 268, 731
HaeII	RGCGCY	1 cut(s)	66
HaeIII	GGCC	3 cut(s)	420, 821, 1530
HapII	CCGG	4 cut(s)	66, 405, 636, 1482
HhaI	GCGC	2 cut(s)	65, 118
Hin1II	CATG	6 cut(s)	279, 306, 631, 838, 1174, 1315
Hin6I	GCGC	2 cut(s)	63, 116
HinP1I	GCGC	2 cut(s)	63, 116
HincII	GTYRAC	2 cut(s)	430, 1132
HindII	GTYRAC	2 cut(s)	430, 1132
HindIII	AAGCTT	1 cut(s)	716
HinfI	GANTC	6 cut(s)	142, 255, 672, 761, 1110, 1141
HpaII	CCGG	4 cut(s)	66, 405, 636, 1482
HphI	GGTGA	6 cut(s)	70, 80, 151, 616, 1042, 1099
Hpy166II	GTNNAC	6 cut(s)	254, 430, 596, 775, 1132, 1438
Hpy188I	TCNGA	7 cut(s)	125, 971, 980, 1177, 1360, 1499, 1504
Hpy188III	TCNNGA	8 cut(s)	241, 526, 694, 748, 767, 859, 1294, 1465
Hpy8I	GTNNAC	6 cut(s)	254, 430, 596, 775, 1132, 1438
Hpy99I	CGWCG	4 cut(s)	230, 569, 944, 1244
HpyAV	CCTTC	7 cut(s)	725, 856, 890, 985, 1174, 1330, 1351
HpyCH4IV	ACGT	9 cut(s)	89, 96, 547, 741, 777, 906, 1128, 1197, 1542
HpyCH4V	TGCA	5 cut(s)	4, 663, 842, 1315, 1432
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1001
HpyF3I	CTNAG	3 cut(s)	348, 1158, 1571
HpySE526I	ACGT	9 cut(s)	89, 96, 547, 741, 777, 906, 1128, 1197, 1542
Hsp92II	CATG	6 cut(s)	279, 306, 631, 838, 1174, 1315
HspAI	GCGC	2 cut(s)	63, 116
Kzo9I	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
LmnI	GCTCC	3 cut(s)	619, 740, 940
Lsp1109I	GCAGC	2 cut(s)	988, 1229
LweI	GCATC	3 cut(s)	851, 1399, 1623
MaeI	CTAG	5 cut(s)	554, 599, 800, 849, 1005
MaeII	ACGT	9 cut(s)	89, 96, 547, 741, 777, 906, 1128, 1197, 1542
MaeIII	GTNAC	5 cut(s)	68, 97, 289, 802, 1334
MalI	GATC	9 cut(s)	359, 559, 659, 698, 973, 1024, 1043, 1226, 1501
MbiI	CCGCTC	1 cut(s)	389
MboI	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
MfeI	CAATTG	1 cut(s)	1535
MflI	RGATCY	5 cut(s)	557, 657, 696, 971, 1022
MhlI	GDGCHC	2 cut(s)	875, 1248
MlsI	TGGCCA	1 cut(s)	821
MluCI	AATT	3 cut(s)	126, 1081, 1535
MluNI	TGGCCA	1 cut(s)	821
MlyI	GAGTC	3 cut(s)	249, 755, 1135
MmeI	TCCRAC	3 cut(s)	213, 649, 760
Mox20I	TGGCCA	1 cut(s)	821
MroXI	GAANNNNTTC	1 cut(s)	1184
MscI	TGGCCA	1 cut(s)	821
MseI	TTAA	3 cut(s)	687, 989, 1654
Msp20I	TGGCCA	1 cut(s)	821
MspA1I	CMGCKG	2 cut(s)	543, 809
MspI	CCGG	4 cut(s)	66, 405, 636, 1482
MspR9I	CCNGG	6 cut(s)	165, 247, 636, 1019, 1365, 1450
MunI	CAATTG	1 cut(s)	1535
MvaI	CCWGG	5 cut(s)	165, 247, 1019, 1365, 1450
MvnI	CGCG	1 cut(s)	116
MwoI	GCNNNNNNNGC	1 cut(s)	1001
NciI	CCSGG	1 cut(s)	636
NdeII	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
NlaIII	CATG	6 cut(s)	279, 306, 631, 838, 1174, 1315
NlaIV	GGNNCC	8 cut(s)	109, 298, 322, 559, 698, 736, 854, 936
NmuCI	GTSAC	3 cut(s)	68, 289, 802
NspI	RCATGY	2 cut(s)	1174, 1315
PaeI	GCATGC	1 cut(s)	1315
PasI	CCCWGGG	1 cut(s)	1018
PcsI	WCGNNNNNNNCGW	4 cut(s)	465, 1134, 1173, 1299
PdmI	GAANNNNTTC	1 cut(s)	1184
PfeI	GAWTC	3 cut(s)	142, 672, 1110
PflMI	CCANNNNNTGG	1 cut(s)	1449
PkrI	GCNGC	4 cut(s)	115, 1003, 1219, 1613
PleI	GAGTC	3 cut(s)	249, 755, 1135
PmaCI	CACGTG	1 cut(s)	90
PmlI	CACGTG	1 cut(s)	90
PpsI	GAGTC	3 cut(s)	249, 755, 1135
Ppu21I	YACGTR	1 cut(s)	90
PpuMI	RGGWCCY	1 cut(s)	297
Psp1406I	AACGTT	1 cut(s)	906
Psp5II	RGGWCCY	1 cut(s)	297
Psp6I	CCWGG	5 cut(s)	163, 245, 1017, 1363, 1448
PspCI	CACGTG	1 cut(s)	90
PspEI	GGTNACC	1 cut(s)	68
PspFI	CCCAGC	2 cut(s)	313, 945
PspGI	CCWGG	5 cut(s)	163, 245, 1017, 1363, 1448
PspN4I	GGNNCC	8 cut(s)	109, 298, 322, 559, 698, 736, 854, 936
PspPI	GGNCC	4 cut(s)	167, 297, 352, 1528
PspPPI	RGGWCCY	1 cut(s)	297
PsrI	GAACNNNNNNTAC	2 cut(s)	86, 118
PstNI	CAGNNNCTG	1 cut(s)	660
PsuI	RGATCY	5 cut(s)	557, 657, 696, 971, 1022
RsaI	GTAC	8 cut(s)	503, 550, 653, 1057, 1163, 1273, 1541, 1583
RsaNI	GTAC	8 cut(s)	502, 549, 652, 1056, 1162, 1272, 1540, 1582
SaqAI	TTAA	3 cut(s)	687, 989, 1654
SatI	GCNGC	4 cut(s)	114, 1002, 1218, 1612
Sau3AI	GATC	9 cut(s)	357, 557, 657, 696, 971, 1022, 1041, 1224, 1499
Sau96I	GGNCC	4 cut(s)	167, 297, 352, 1528
ScaI	AGTACT	1 cut(s)	1163
SchI	GAGTC	3 cut(s)	249, 755, 1135
ScrFI	CCNGG	6 cut(s)	165, 247, 636, 1019, 1365, 1450
SduI	GDGCHC	2 cut(s)	875, 1248
SfaNI	GCATC	3 cut(s)	851, 1399, 1623
SgrAI	CRCCGGYG	2 cut(s)	65, 404
SinI	GGWCC	3 cut(s)	167, 297, 352
SmlI	CTYRAG	2 cut(s)	524, 857
SmoI	CTYRAG	2 cut(s)	524, 857
SphI	GCATGC	1 cut(s)	1315
Sse9I	AATT	3 cut(s)	126, 1081, 1535
SspMI	CTAG	5 cut(s)	554, 599, 800, 849, 1005
StyD4I	CCNGG	6 cut(s)	163, 245, 634, 1017, 1363, 1448
StyI	CCWWGG	2 cut(s)	700, 930
TaiI	ACGT	9 cut(s)	92, 99, 550, 744, 780, 909, 1131, 1200, 1545
TaqI	TCGA	6 cut(s)	225, 1242, 1281, 1293, 1407, 1473
TasI	AATT	3 cut(s)	126, 1081, 1535
TatI	WGTACW	3 cut(s)	651, 1161, 1581
TauI	GCSGC	2 cut(s)	116, 1614
TfiI	GAWTC	3 cut(s)	142, 672, 1110
Tru1I	TTAA	3 cut(s)	687, 989, 1654
Tru9I	TTAA	3 cut(s)	687, 989, 1654
TscAI	CASTG	4 cut(s)	791, 880, 1003, 1552
TseFI	GTSAC	3 cut(s)	68, 289, 802
TseI	GCWGC	2 cut(s)	1001, 1217
Tsp45I	GTSAC	3 cut(s)	68, 289, 802
TspDTI	ATGAA	2 cut(s)	644, 728
TspGWI	ACGGA	5 cut(s)	120, 168, 413, 1050, 1259
TspRI	CASTG	4 cut(s)	791, 880, 1003, 1552
Van91I	CCANNNNNTGG	1 cut(s)	1449
VpaK11BI	GGWCC	3 cut(s)	167, 297, 352
XagI	CCTNNNNNAGG	1 cut(s)	860
XapI	RAATTY	2 cut(s)	126, 1081
XceI	RCATGY	2 cut(s)	1174, 1315
XcmI	CCANNNNNNNNNTGG	1 cut(s)	52
XmiI	GTMKAC	1 cut(s)	1437
XmnI	GAANNNNTTC	1 cut(s)	1184
XspI	CTAG	5 cut(s)	554, 599, 800, 849, 1005
ZrmI	AGTACT	1 cut(s)	1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.