Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0001996

Physical Location & Seq

Genomic Coordinates Forward (+)

63844 .. 65624

Gene Structure 1781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g00060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGCTTCCGTGATGTATGCGCTGTTGCTGTGCCTCTCAGCCGGAGCACTTTCGGTGGTCCAGGGTGAAGACCCTTACCTGTTCTTCACATGGAATGTCACCTACGGAACCATCTCTCCCCTCGGAGTCCCCCAGCAAGCAATTCTCATCAATGGCCAGTTCCCAGGACCCAACATCAACTCCACCAGCAACAACAACATCGTCCTCAACGTCTTCAACAACCTCGATGAGCCATTCCTTTTGACATGGAATGGCGTCCAGCAGAGGAAGAATTCGTGGCAGGATGGAACCCTCGGAACCATGTGCCCCATCGCCCCTGGTACCAACTTCACCTACCGCTTCCAAGTCAAGGATCAGATCCGGAGCTTCATGTACTATCCCGTCACTGCCATGCACAGGGCAGCAGGCGGCTTCGGTGGGCTCCGCATCAACAGTCGTCTGCTCATTCCCGTCCCATATGCTGATCCCGAGGATGAATACACCGTCATGATCGGCGACTGGTACACCAAAAGCCACACCGCTCTCAAGAAAATCTTGGACAGCGGCCGCTCCATGGGAAGACCCGTCGGCGTCCTAATCAACGGCAAGAACGCCAAGGGAGACGGCAAAGACGAGCCCCTGTTCACCATGAAGCCAGGGAAGACCTACAAGTACAGGGTCTGCAACGTGGGGCTCAAGAACTCCCTCAACTTCAGGATCCAAGGCCATCCCTTGAAGCTTGTCGAGATGGAGGGCTCCCACACCGTCCAGAACACCTACGAGTCCCTTGACGTGCACGTGGGGCAATGCTTCTCGTTGCTAGTCACTGCAGACAAAGAGCCCAAGGACTACTACATGGTGGCCTCCACCCGATTCACCAAGACCGTGCTCACCGGCAAAGGCATTATCCGCTACGAAAATGGTAACGGCCCTGCATCCCCCGAGCTCCCCGAGGCTCCCGTAGGATGGGCCTGGTCTCTTAACCAGTTCCGTTCCTTCCGCTGGAACCTCACTGCCAGCGCTGCCAGGCCTAACCCTCAGGGCTCCTACCACTACGGAAAGATCGATATCACCCGCACCATCAAGATCGTCAACTCCGCCTCCAGGGTGGATGGCAAGCTCCGGTATGCCGTCAACGGAGGCTCCCACGTGGAATCCGAAACCCCACTCAAGCTGGCTGAGTACTTTGGTGTGGCCGACAAGGTCTTCAAGTACGACACAATCGAGGATGAACCCCCAGCCACCGTGGAGGACAAGATCACCTTGGCACCCAACGTTGTCAACCAGACCTTCCGTGACTTTGTAGATCGATCATCTTTGAGAACCACGAGAAGAGCATTCAGTCATGGCATTTGGATGGATACTCCTTCTTTGCCGTCGCGTAACATTGAACCCGGGAGGTGGACCCCAGAAAAGAGAAAGAACTACAACCTTCTTGACGGAGTGAGCAGGCACACCATCCAAGTGTTCCCCAAATCCTGGGCTGCCGTCATGTTGACCTTCGACAACGCAGGAATGTGGAACGTGAGGTCTGAACAACCGGAGAGGCGCTACCTCGGACAACAGTTCTACGTGAGCGTCCTGTCCCCTGCACGCTCCCTCAGGGACGAGTACAACCTCCCAGAAACCGCCCAACTCTGTGGCATTGTCAAGGATTCGCCTAAGCCCCCTCCATACAGCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

555

Amino Acids

62.07

Weight (kDa)

9.17

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 146	3e-39	Multicopper oxidase
Cu-oxidase	PF00394	158 - 300	8.2e-42	Multicopper oxidase
Cu-oxidase_2	PF07731	442 - 523	5.3e-13	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55560 AT1G55570 AT3G13390 AT3G13400 AT3G13400
fragaria_vesca	FvH4_3g46080 FvH4_6g20700
malus_domestica	MD03G1000200.v1.1 MD03G1000500.v1.1 MD11G1000300.v1.1 MD11G1000400.v1.1
prunus_persica	Prupe.6G000400_v2.0.a1 Prupe.6G000500_v2.0.a1
pyrus_communis	pycom03g00050 pycom11g00060
rosa_chinensis	RchiOBHm_Chr3g0476601 RchiOBHm_Chr3g0476621 RchiOBHm_Chr5g0084141
rosa_laevigata	RLG00000001981 RLG00000001982 RLG00000023759 RLG00000037086
rosa_multiflora	Rmu_co7980006.1_g000001 Rmu_sc0008241.1_g000008 Rmu_sc0008241.1_g000011 Rmu_sc0014688.1_g000001 Rmu_sc0035447.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000500 Rroxscaffold_6G00405150 Rroxscaffold_6G00405170
rosa_rugosa	Rorug03G0155600 Rorug03G0155900 Rorug05G0489500
rosa_samantha	Rh3AG206200 Rh3CG232600 Rh3DG232400 Rh3DG232600 Rh5AG542100 Rh5CG589700 Rh5DG576100 Rh7DG309900
rosa_wichuraiana	Rw3G018780 Rw3G018790 Rw5G050430 Rw7G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	320
AccB1I	GGYRCC	2 cut(s)	320, 1246
AccB7I	CCANNNNNTGG	1 cut(s)	1458
AccBSI	CCGCTC	2 cut(s)	521, 549
AccII	CGCG	1 cut(s)	1360
AccIII	TCCGGA	1 cut(s)	360
AclI	AACGTT	1 cut(s)	1254
AclWI	GGATC	5 cut(s)	352, 360, 458, 691, 704
AcoI	YGGCCR	3 cut(s)	154, 544, 1173
AcsI	RAATTY	1 cut(s)	271
AcuI	CTGAAG	1 cut(s)	676
AcvI	CACGTG	2 cut(s)	778, 1129
AcyI	GRCGYC	2 cut(s)	255, 570
AfaI	GTAC	7 cut(s)	322, 374, 503, 653, 1163, 1193, 1592
AfeI	AGCGCT	1 cut(s)	1000
AfiI	CCNNNNNNNGG	8 cut(s)	349, 396, 553, 945, 981, 1083, 1380, 1458
AgsI	TTSAA	4 cut(s)	217, 715, 1189, 1370
AjiI	CACGTC	1 cut(s)	772
AjnI	CCWGG	8 cut(s)	60, 163, 316, 634, 950, 1004, 1082, 1457
AloI	GAACNNNNNNTCC	2 cut(s)	100, 132
AluBI	AGCT	6 cut(s)	366, 718, 925, 1099, 1153, 1659
AluI	AGCT	6 cut(s)	366, 718, 925, 1099, 1153, 1659
Alw21I	GWGCWC	4 cut(s)	49, 777, 870, 927
Alw26I	GTCTC	2 cut(s)	594, 960
Alw44I	GTGCAC	1 cut(s)	773
AlwI	GGATC	5 cut(s)	352, 360, 458, 691, 704
AlwNI	CAGNNNCTG	1 cut(s)	660
Ama87I	CYCGRG	4 cut(s)	467, 920, 929, 1373
Aor13HI	TCCGGA	1 cut(s)	360
Aor51HI	AGCGCT	1 cut(s)	1000
AoxI	GGCC	8 cut(s)	154, 544, 703, 840, 907, 948, 1007, 1173
ApaLI	GTGCAC	1 cut(s)	773
ApeKI	GCWGC	3 cut(s)	401, 1001, 1463
ApoI	RAATTY	1 cut(s)	271
Asp718I	GGTACC	1 cut(s)	320
AspLEI	GCGC	3 cut(s)	22, 1001, 1530
AspS9I	GGNCC	5 cut(s)	58, 167, 908, 948, 1383
AsuC2I	CCSGG	2 cut(s)	1374, 1375
AsuHPI	GGTGA	8 cut(s)	77, 91, 322, 616, 847, 862, 1042, 1231
AvaI	CYCGRG	4 cut(s)	467, 920, 929, 1373
AvaII	GGWCC	3 cut(s)	58, 167, 1383
AxyI	CCTNAGG	2 cut(s)	1017, 1580
BaeGI	GKGCMC	2 cut(s)	308, 777
BalI	TGGCCA	1 cut(s)	156
BamHI	GGATCC	1 cut(s)	696
BanI	GGYRCC	2 cut(s)	320, 1246
BanII	GRGCYC	7 cut(s)	423, 618, 675, 737, 822, 927, 1025
BauI	CACGAG	1 cut(s)	1306
BbrPI	CACGTG	2 cut(s)	778, 1129
BbsI	GAAGAC	5 cut(s)	75, 205, 565, 647, 1177
Bbv12I	GWGCWC	4 cut(s)	49, 777, 870, 927
BbvI	GCAGC	3 cut(s)	413, 988, 1450
BceAI	ACGGC	6 cut(s)	598, 619, 922, 1094, 1339, 1451
BciT130I	CCWGG	8 cut(s)	62, 165, 318, 636, 952, 1006, 1084, 1459
BciVI	GTATCC	1 cut(s)	1333
BcnI	CCSGG	2 cut(s)	1374, 1375
BcoDI	GTCTC	2 cut(s)	594, 960
BfaI	CTAG	1 cut(s)	800
BfmI	CTRYAG	1 cut(s)	807
BfoI	RGCGCY	2 cut(s)	1002, 1531
BfuI	GTATCC	1 cut(s)	1333
BisI	GCNGC	6 cut(s)	402, 409, 544, 547, 1002, 1464
BlsI	GCNGC	6 cut(s)	403, 410, 545, 548, 1003, 1465
BmcAI	AGTACT	1 cut(s)	1163
Bme18I	GGWCC	3 cut(s)	58, 167, 1383
BmeT110I	CYCGRG	4 cut(s)	467, 920, 929, 1373
BmgBI	CACGTC	1 cut(s)	772
BmgT120I	GGNCC	5 cut(s)	58, 167, 908, 948, 1383
BmsI	GCATC	2 cut(s)	435, 923
BpiI	GAAGAC	5 cut(s)	75, 205, 565, 647, 1177
BpmI	CTGGAG	1 cut(s)	1066
Bpu10I	CCTNAGC	1 cut(s)	1641
BpuEI	CTTGAG	3 cut(s)	509, 659, 1133
BpuMI	CCSGG	2 cut(s)	1374, 1375
Bsa29I	ATCGAT	2 cut(s)	1044, 1288
BsaAI	YACGTR	3 cut(s)	778, 1129, 1552
BsaBI	GATNNNNATC	1 cut(s)	1046
BsaHI	GRCGYC	2 cut(s)	255, 570
BsaI	GGTCTC	1 cut(s)	960
BsaWI	WCCGGW	3 cut(s)	360, 1101, 1519
BsaXI	ACNNNNNCTCC	8 cut(s)	100, 130, 164, 194, 1064, 1094, 1106, 1136
Bsc4I	CCNNNNNNNGG	8 cut(s)	349, 396, 553, 945, 981, 1083, 1380, 1458
Bse118I	RCCGGY	1 cut(s)	872
Bse1I	ACTGG	3 cut(s)	157, 503, 964
Bse21I	CCTNAGG	2 cut(s)	1017, 1580
Bse3DI	GCAATG	1 cut(s)	791
Bse8I	GATNNNNATC	1 cut(s)	1046
BseAI	TCCGGA	1 cut(s)	360
BseBI	CCWGG	8 cut(s)	62, 165, 318, 636, 952, 1006, 1084, 1459
BseCI	ATCGAT	2 cut(s)	1044, 1288
BseGI	GGATG	9 cut(s)	289, 478, 706, 914, 950, 1096, 1213, 1341, 1437
BseJI	GATNNNNATC	1 cut(s)	1046
BseLI	CCNNNNNNNGG	8 cut(s)	349, 396, 553, 945, 981, 1083, 1380, 1458
BseMI	GCAATG	1 cut(s)	791
BseMII	CTCAG	4 cut(s)	51, 1031, 1149, 1594
BseNI	ACTGG	3 cut(s)	157, 503, 964
BseSI	GKGCMC	2 cut(s)	308, 777
BseX3I	CGGCCG	1 cut(s)	544
BseXI	GCAGC	3 cut(s)	413, 988, 1450
BseYI	CCCAGC	2 cut(s)	132, 1216
BsgI	GTGCAG	1 cut(s)	1554
Bsh1236I	CGCG	1 cut(s)	1360
Bsh1285I	CGRYCG	1 cut(s)	547
BshFI	GGCC	8 cut(s)	156, 546, 705, 842, 909, 950, 1009, 1175
BshNI	GGYRCC	2 cut(s)	320, 1246
BshVI	ATCGAT	2 cut(s)	1044, 1288
BsiEI	CGRYCG	1 cut(s)	547
BsiHKAI	GWGCWC	4 cut(s)	49, 777, 870, 927
BsiHKCI	CYCGRG	4 cut(s)	467, 920, 929, 1373
BsiSI	CCGG	6 cut(s)	42, 361, 873, 1102, 1374, 1520
BslFI	GGGAC	5 cut(s)	113, 437, 748, 1549, 1598
BslI	CCNNNNNNNGG	8 cut(s)	349, 396, 553, 945, 981, 1083, 1380, 1458
BsmAI	GTCTC	2 cut(s)	594, 960
BsmBI	CGTCTC	1 cut(s)	594
BsmFI	GGGAC	5 cut(s)	113, 437, 748, 1549, 1598
BsmI	GAATGC	1 cut(s)	1316
BsnI	GGCC	8 cut(s)	156, 546, 705, 842, 909, 950, 1009, 1175
Bso31I	GGTCTC	1 cut(s)	960
BsoBI	CYCGRG	4 cut(s)	467, 920, 929, 1373
Bsp13I	TCCGGA	1 cut(s)	360
Bsp19I	CCATGG	1 cut(s)	552
BspANI	GGCC	8 cut(s)	156, 546, 705, 842, 909, 950, 1009, 1175
BspCNI	CTCAG	4 cut(s)	50, 1030, 1150, 1593
BspDI	ATCGAT	2 cut(s)	1044, 1288
BspEI	TCCGGA	1 cut(s)	360
BspFNI	CGCG	1 cut(s)	1360
BspHI	TCATGA	1 cut(s)	486
BspMAI	CTGCAG	1 cut(s)	811
BspPI	GGATC	5 cut(s)	352, 360, 458, 691, 704
BspQI	GCTCTTC	1 cut(s)	1306
BspT107I	GGYRCC	2 cut(s)	320, 1246
BspTNI	GGTCTC	1 cut(s)	960
BsrBI	CCGCTC	2 cut(s)	521, 549
BsrDI	GCAATG	1 cut(s)	791
BsrFI	RCCGGY	1 cut(s)	872
BsrI	ACTGG	3 cut(s)	157, 503, 964
BssAI	RCCGGY	1 cut(s)	872
BssNI	GRCGYC	2 cut(s)	255, 570
BssSI	CACGAG	1 cut(s)	1306
BssT1I	CCWWGG	5 cut(s)	552, 594, 700, 822, 1242
Bst2BI	CACGAG	1 cut(s)	1306
Bst2UI	CCWGG	8 cut(s)	62, 165, 318, 636, 952, 1006, 1084, 1459
Bst4CI	ACNGT	6 cut(s)	434, 484, 745, 865, 1225, 1545
Bst6I	CTCTTC	1 cut(s)	1306
BstACI	GRCGYC	2 cut(s)	255, 570
BstBAI	YACGTR	3 cut(s)	778, 1129, 1552
BstC8I	GCNNGC	7 cut(s)	138, 406, 997, 1097, 1155, 1430, 1573
BstDEI	CTNAG	5 cut(s)	37, 1017, 1158, 1580, 1641
BstDSI	CCRYGG	2 cut(s)	552, 1224
BstF5I	GGATG	9 cut(s)	289, 478, 706, 914, 950, 1096, 1213, 1341, 1437
BstFNI	CGCG	1 cut(s)	1360
BstH2I	RGCGCY	2 cut(s)	1002, 1531
BstHHI	GCGC	3 cut(s)	22, 1001, 1530
BstMAI	GTCTC	2 cut(s)	594, 960
BstMCI	CGRYCG	1 cut(s)	547
BstMWI	GCNNNNNNNGC	3 cut(s)	781, 888, 1001
BstNI	CCWGG	8 cut(s)	62, 165, 318, 636, 952, 1006, 1084, 1459
BstSFI	CTRYAG	1 cut(s)	807
BstSLI	GKGCMC	2 cut(s)	308, 777
BstUI	CGCG	1 cut(s)	1360
BstV1I	GCAGC	3 cut(s)	413, 988, 1450
BstV2I	GAAGAC	5 cut(s)	75, 205, 565, 647, 1177
BstX2I	RGATCY	2 cut(s)	357, 696
BstXI	CCANNNNNNTGG	1 cut(s)	1619
BstYI	RGATCY	2 cut(s)	357, 696
BstZI	CGGCCG	1 cut(s)	544
Bsu15I	ATCGAT	2 cut(s)	1044, 1288
Bsu36I	CCTNAGG	2 cut(s)	1017, 1580
BsuI	GTATCC	1 cut(s)	1333
BsuRI	GGCC	8 cut(s)	156, 546, 705, 842, 909, 950, 1009, 1175
BsuTUI	ATCGAT	2 cut(s)	1044, 1288
BtgI	CCRYGG	2 cut(s)	552, 1224
BtgZI	GCGATG	1 cut(s)	295
BtrI	CACGTC	1 cut(s)	772
BtsCI	GGATG	9 cut(s)	289, 478, 706, 914, 950, 1096, 1213, 1341, 1437
BtsI	GCAGTG	3 cut(s)	384, 804, 990
BtsIMutI	CAGTG	3 cut(s)	384, 804, 990
Cac8I	GCNNGC	7 cut(s)	138, 406, 997, 1097, 1155, 1430, 1573
CaiI	CAGNNNCTG	1 cut(s)	660
CciI	TCATGA	1 cut(s)	486
CciNI	GCGGCCGC	1 cut(s)	544
CfoI	GCGC	3 cut(s)	22, 1001, 1530
Cfr10I	RCCGGY	1 cut(s)	872
Cfr13I	GGNCC	5 cut(s)	58, 167, 908, 948, 1383
Cfr9I	CCCGGG	1 cut(s)	1373
ClaI	ATCGAT	2 cut(s)	1044, 1288
CseI	GACGC	3 cut(s)	244, 559, 1546
Csp6I	GTAC	7 cut(s)	321, 373, 502, 652, 1162, 1192, 1591
CviQI	GTAC	7 cut(s)	321, 373, 502, 652, 1162, 1192, 1591
DdeI	CTNAG	5 cut(s)	37, 1017, 1158, 1580, 1641
EaeI	YGGCCR	3 cut(s)	154, 544, 1173
EagI	CGGCCG	1 cut(s)	544
Eam1104I	CTCTTC	1 cut(s)	1306
EarI	CTCTTC	1 cut(s)	1306
EciI	GGCGGA	1 cut(s)	1066
Ecl136II	GAGCTC	1 cut(s)	925
EclXI	CGGCCG	1 cut(s)	544
Eco130I	CCWWGG	5 cut(s)	552, 594, 700, 822, 1242
Eco147I	AGGCCT	1 cut(s)	1009
Eco24I	GRGCYC	7 cut(s)	423, 618, 675, 737, 822, 927, 1025
Eco31I	GGTCTC	1 cut(s)	960
Eco32I	GATATC	1 cut(s)	1048
Eco47I	GGWCC	3 cut(s)	58, 167, 1383
Eco47III	AGCGCT	1 cut(s)	1000
Eco52I	CGGCCG	1 cut(s)	544
Eco53kI	GAGCTC	1 cut(s)	925
Eco57I	CTGAAG	1 cut(s)	676
Eco72I	CACGTG	2 cut(s)	778, 1129
Eco81I	CCTNAGG	2 cut(s)	1017, 1580
Eco88I	CYCGRG	4 cut(s)	467, 920, 929, 1373
EcoICRI	GAGCTC	1 cut(s)	925
EcoO109I	RGGNCCY	1 cut(s)	167
EcoRI	GAATTC	1 cut(s)	271
EcoRII	CCWGG	8 cut(s)	60, 163, 316, 634, 950, 1004, 1082, 1457
EcoRV	GATATC	1 cut(s)	1048
EcoT14I	CCWWGG	5 cut(s)	552, 594, 700, 822, 1242
EcoT38I	GRGCYC	7 cut(s)	423, 618, 675, 737, 822, 927, 1025
ErhI	CCWWGG	5 cut(s)	552, 594, 700, 822, 1242
Esp3I	CGTCTC	1 cut(s)	594
FalI	AAGNNNNNCTT	4 cut(s)	518, 550, 1226, 1258
FaqI	GGGAC	5 cut(s)	113, 437, 748, 1549, 1598
FauI	CCCGC	1 cut(s)	1061
FauNDI	CATATG	1 cut(s)	457
Fnu4HI	GCNGC	6 cut(s)	402, 409, 544, 547, 1002, 1464
FokI	GGATG	9 cut(s)	296, 485, 693, 901, 957, 1103, 1220, 1348, 1424
FriOI	GRGCYC	7 cut(s)	423, 618, 675, 737, 822, 927, 1025
Fsp4HI	GCNGC	6 cut(s)	402, 409, 544, 547, 1002, 1464
FspBI	CTAG	1 cut(s)	800
GlaI	GCGC	3 cut(s)	21, 1000, 1529
GluI	GCNGC	6 cut(s)	402, 409, 544, 547, 1002, 1464
GsaI	CCCAGC	2 cut(s)	136, 1220
GsuI	CTGGAG	1 cut(s)	1066
HaeII	RGCGCY	2 cut(s)	1002, 1531
HaeIII	GGCC	8 cut(s)	156, 546, 705, 842, 909, 950, 1009, 1175
HapII	CCGG	6 cut(s)	42, 361, 873, 1102, 1374, 1520
HgaI	GACGC	3 cut(s)	244, 559, 1546
HhaI	GCGC	3 cut(s)	22, 1001, 1530
Hin1I	GRCGYC	2 cut(s)	255, 570
Hin6I	GCGC	3 cut(s)	20, 999, 1528
HinP1I	GCGC	3 cut(s)	20, 999, 1528
HincII	GTYRAC	4 cut(s)	1072, 1114, 1261, 1476
HindII	GTYRAC	4 cut(s)	1072, 1114, 1261, 1476
HindIII	AAGCTT	1 cut(s)	716
HinfI	GANTC	5 cut(s)	126, 761, 852, 1133, 1634
HpaII	CCGG	6 cut(s)	42, 361, 873, 1102, 1374, 1520
HphI	GGTGA	8 cut(s)	77, 91, 322, 616, 847, 862, 1042, 1231
Hpy166II	GTNNAC	8 cut(s)	504, 624, 775, 1072, 1114, 1261, 1383, 1476
Hpy188I	TCNGA	6 cut(s)	125, 296, 357, 1138, 1513, 1538
Hpy8I	GTNNAC	8 cut(s)	504, 624, 775, 1072, 1114, 1261, 1383, 1476
Hpy99I	CGWCG	2 cut(s)	569, 1360
HpyAV	CCTTC	5 cut(s)	985, 1279, 1356, 1421, 1489
HpyCH4III	ACNGT	6 cut(s)	434, 484, 745, 865, 1225, 1545
HpyCH4IV	ACGT	8 cut(s)	210, 666, 771, 777, 1128, 1254, 1503, 1551
HpyCH4V	TGCA	6 cut(s)	394, 663, 775, 809, 914, 1571
HpyF10VI	GCNNNNNNNGC	3 cut(s)	781, 888, 1001
HpyF3I	CTNAG	5 cut(s)	37, 1017, 1158, 1580, 1641
HpySE526I	ACGT	8 cut(s)	210, 666, 771, 777, 1128, 1254, 1503, 1551
Hsp92I	GRCGYC	2 cut(s)	255, 570
HspAI	GCGC	3 cut(s)	20, 999, 1528
Kpn2I	TCCGGA	1 cut(s)	360
KpnI	GGTACC	1 cut(s)	324
LguI	GCTCTTC	1 cut(s)	1306
Lsp1109I	GCAGC	3 cut(s)	413, 988, 1450
LweI	GCATC	2 cut(s)	435, 923
MaeI	CTAG	1 cut(s)	800
MaeII	ACGT	8 cut(s)	210, 666, 771, 777, 1128, 1254, 1503, 1551
MaeIII	GTNAC	6 cut(s)	97, 382, 802, 902, 1274, 1361
MbiI	CCGCTC	2 cut(s)	521, 549
MboII	GAAGA	8 cut(s)	76, 80, 205, 280, 570, 652, 1177, 1323
MflI	RGATCY	2 cut(s)	357, 696
MlsI	TGGCCA	1 cut(s)	156
MluCI	AATT	2 cut(s)	141, 271
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	2 cut(s)	135, 770
Mox20I	TGGCCA	1 cut(s)	156
MroI	TCCGGA	1 cut(s)	360
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	2 cut(s)	960, 1663
MslI	CAYNNNNRTG	4 cut(s)	389, 485, 1334, 1442
Msp20I	TGGCCA	1 cut(s)	156
MspA1I	CMGCKG	2 cut(s)	543, 981
MspI	CCGG	6 cut(s)	42, 361, 873, 1102, 1374, 1520
Mva1269I	GAATGC	1 cut(s)	1316
MvaI	CCWGG	8 cut(s)	62, 165, 318, 636, 952, 1006, 1084, 1459
MvnI	CGCG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	3 cut(s)	781, 888, 1001
NciI	CCSGG	2 cut(s)	1374, 1375
NcoI	CCATGG	1 cut(s)	552
NdeI	CATATG	1 cut(s)	457
NmuCI	GTSAC	4 cut(s)	97, 382, 802, 1274
NotI	GCGGCCGC	1 cut(s)	544
PagI	TCATGA	1 cut(s)	486
PceI	AGGCCT	1 cut(s)	1009
PciSI	GCTCTTC	1 cut(s)	1306
PcsI	WCGNNNNNNNCGW	5 cut(s)	207, 609, 1041, 1134, 1200
PctI	GAATGC	1 cut(s)	1316
PfeI	GAWTC	3 cut(s)	852, 1133, 1634
PflFI	GACNNNGTC	1 cut(s)	1181
PflMI	CCANNNNNTGG	1 cut(s)	1458
PkrI	GCNGC	6 cut(s)	403, 410, 545, 548, 1003, 1465
PleI	GAGTC	2 cut(s)	134, 769
PmaCI	CACGTG	2 cut(s)	778, 1129
PmlI	CACGTG	2 cut(s)	778, 1129
PpsI	GAGTC	2 cut(s)	134, 769
Ppu21I	YACGTR	3 cut(s)	778, 1129, 1552
PpuMI	RGGWCCY	1 cut(s)	167
Psp124BI	GAGCTC	1 cut(s)	927
Psp1406I	AACGTT	1 cut(s)	1254
Psp5II	RGGWCCY	1 cut(s)	167
Psp6I	CCWGG	8 cut(s)	60, 163, 316, 634, 950, 1004, 1082, 1457
PspCI	CACGTG	2 cut(s)	778, 1129
PspFI	CCCAGC	2 cut(s)	132, 1216
PspGI	CCWGG	8 cut(s)	60, 163, 316, 634, 950, 1004, 1082, 1457
PspPI	GGNCC	5 cut(s)	58, 167, 908, 948, 1383
PspPPI	RGGWCCY	1 cut(s)	167
PstI	CTGCAG	1 cut(s)	811
PstNI	CAGNNNCTG	1 cut(s)	660
PsuI	RGATCY	2 cut(s)	357, 696
PsyI	GACNNNGTC	1 cut(s)	1181
RsaI	GTAC	7 cut(s)	322, 374, 503, 653, 1163, 1193, 1592
RsaNI	GTAC	7 cut(s)	321, 373, 502, 652, 1162, 1192, 1591
RseI	CAYNNNNRTG	4 cut(s)	389, 485, 1334, 1442
SacI	GAGCTC	1 cut(s)	927
SapI	GCTCTTC	1 cut(s)	1306
SaqAI	TTAA	2 cut(s)	960, 1663
SatI	GCNGC	6 cut(s)	402, 409, 544, 547, 1002, 1464
Sau96I	GGNCC	5 cut(s)	58, 167, 908, 948, 1383
ScaI	AGTACT	1 cut(s)	1163
SchI	GAGTC	2 cut(s)	135, 770
SfaNI	GCATC	2 cut(s)	435, 923
SfcI	CTRYAG	1 cut(s)	807
SinI	GGWCC	3 cut(s)	58, 167, 1383
SmaI	CCCGGG	1 cut(s)	1375
SmiMI	CAYNNNNRTG	4 cut(s)	389, 485, 1334, 1442
SmlI	CTYRAG	3 cut(s)	524, 674, 1148
SmoI	CTYRAG	3 cut(s)	524, 674, 1148
Sse9I	AATT	2 cut(s)	141, 271
SseBI	AGGCCT	1 cut(s)	1009
SspMI	CTAG	1 cut(s)	800
SstI	GAGCTC	1 cut(s)	927
StuI	AGGCCT	1 cut(s)	1009
StyI	CCWWGG	5 cut(s)	552, 594, 700, 822, 1242
TaaI	ACNGT	6 cut(s)	434, 484, 745, 865, 1225, 1545
TaiI	ACGT	8 cut(s)	213, 669, 774, 780, 1131, 1257, 1506, 1554
TaqI	TCGA	6 cut(s)	225, 723, 1044, 1203, 1288, 1482
TasI	AATT	2 cut(s)	141, 271
TatI	WGTACW	4 cut(s)	372, 651, 1161, 1590
TauI	GCSGC	3 cut(s)	411, 546, 549
TfiI	GAWTC	3 cut(s)	852, 1133, 1634
Tru1I	TTAA	2 cut(s)	960, 1663
Tru9I	TTAA	2 cut(s)	960, 1663
TscAI	CASTG	3 cut(s)	391, 811, 997
TseFI	GTSAC	4 cut(s)	97, 382, 802, 1274
TseI	GCWGC	3 cut(s)	401, 1001, 1463
Tsp45I	GTSAC	4 cut(s)	97, 382, 802, 1274
TspDTI	ATGAA	4 cut(s)	358, 489, 644, 1224
TspGWI	ACGGA	6 cut(s)	120, 959, 1050, 1131, 1262, 1434
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	3 cut(s)	391, 811, 997
Tth111I	GACNNNGTC	1 cut(s)	1181
Van91I	CCANNNNNTGG	1 cut(s)	1458
VneI	GTGCAC	1 cut(s)	773
VpaK11BI	GGWCC	3 cut(s)	58, 167, 1383
XapI	RAATTY	1 cut(s)	271
XmaI	CCCGGG	1 cut(s)	1373
XspI	CTAG	1 cut(s)	800
ZrmI	AGTACT	1 cut(s)	1163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.