AT1G61010

Cleavage and polyadenylation specificity factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002312
Physical Location & Seq
Reverse (-)
22474267 .. 22477765
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61010.2

Sequence Viewer

Length: 2082 bp
ATGGCTTCTTCTTCTACTTCTCTGAAAAGAAGAGAGCAACCAATTTCGCGAGATGGAGATCAACTTATCGTTACTCCGTTAGGAGCCGGAAGTGAAGTGGGTCGTTCCTGTGTTTACATGTCCTTCCGAGGCAAAAATATTCTGTTTGATTGTGGGATTCATCCTGCGTACTCGGGCATGGCTGCGTTGCCTTACTTCGATGAGATTGATCCTTCTTCCATTGATGTCCTCTTGATTACTCACTTTCATATAGATCATGCAGCATCTCTACCTTATTTTCTGGAGAAGACGACATTCAATGGGCGGGTTTTCATGACACATGCAACAAAGGCCATCTACAAGCTGTTGCTTACAGATTATGTAAAAGTGAGCAAAGTGTCTGTGGAAGATATGTTGTTCGATGAACAAGACATCAACAAGTCTATGGACAAAATTGAGGTAATTGACTTCCATCAAACAGTTGAAGTGAATGGCATAAAGTTCTGGTGTTACACGGCAGGCCATGTTTTGGGTGCAGCCATGTTTATGGTGGATATAGCTGGTGTCCGAATCCTCTATACAGGCGACTATTCCCGTGAGGAAGACCGACATCTGAGAGCAGCTGAGCTTCCTCAATTCTCCCCTGACATATGCATCATTGAATCCACTTCTGGTGTCCAGCTTCATCAATCTCGTCATATTCGTGAGAAACGCTTCACTGATGTAATCCATTCAACGGTTGCTCAGGGTGGACGTGTGCTGATCCCGGCTTTTGCACTGGGCCGTGCTCAGGAACTTCTCTTGATTCTTGATGAATACTGGGCGAACCACCCAGATCTACACAATATCCCAATCTACTATGCATCACCACTCGCCAAAAAGTGTATGGCGGTTTACCAAACCTACATATTATCTATGAACGACAGAATCCGCAACCAGTTTGCAAATTCTAATCCGTTTGTGTTCAAGCACATTTCTCCATTAAACAGCATCGATGATTTTAATGATGTCGGTCCATCTGTGGTAATGGCTACTCCTGGAGGTCTTCAAAGCGGTCTCTCAAGGCAACTCTTTGACAGCTGGTGTTCAGATAAGAAGAATGCTTGTATCATACCAGGTTATATGGTGGAAGGTACACTGGCCAAGACGATAATTAATGAACCAAAGGAGGTGACTCTTATGAATGGTCTTACTGCTCCGCTCAACATGCAAGTGCACTATATATCGTTCTCTGCTCATGCAGATTACGCGCAGACGAGCACGTTCTTGAAAGAGCTCATGCCTCCTAACATCATCCTTGTTCACGGTGAAGCTAACGAGATGATGAGGCTCAAACAGAAGCTCTTAACAGAGTTTCCTGATGGAAACACAAAGATCATGACCCCGAAGAACTGTGAGTCAGTGGAAATGTATTTTAATTCTGAGAAATTGGCGAAAACCATTGGGAGATTGGCGGAAAAGACACCTGATGTTGGCGATACAGTAAGCGGGATTCTGGTGAAGAAAGGGTTCACTTATCAGATAATGGCACCTGACGAACTCCATGTTTTCTCACAGCTATCAACAGCAACTGTAACTCAGCGAATTACAATCCCGTTTGTAGGAGCTTTTGGTGTGATAAAACATCGCCTGGAGAAGATTTTCGAGAGCGTGGAATTTTCAACAGATGAGGAATCGGGGCTTCCAGCACTGAAAGTTCATGAAAGAGTAACGGTGAAACAAGAGTCAGAGAAGCACATCTCACTTCAGTGGTCATCAGATCCAATAAGTGACATGGTTTCAGACTCCATTGTAGCTCTGATTCTCAACATCAGCCGAGAAGTCCCCAAGATCGTTATGGAAGAAGAAGATGCTGTGAAATCCGAGGAAGAGAACGGGAAGAAAGTTGAGAAAGTGATATACGCACTTCTTGTTTCGCTTTTCGGGGATGTGAAACTAGGAGAAAACGGGAAACTGGTGATTAGGGTCGATGGCAATGTCGCTCAGCTGGATAAAGAGAGTGGAGAGGTAGAGAGTGAGCATTCAGGTCTTAAGGAAAGAGTGAGAGTAGCTTTTGAGCGGATTCAGAGCGCTGTGAAACCAATCCCTCTCTCAGCTTCTTAG

Protein Analysis

693

Amino Acids

77.36

Weight (kDa)

5.69

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lactamase_B PF00753 35 - 196 2.3e-18 Metallo-beta-lactamase superfamily
Anti-Pycsar_Apyc1 PF23023 40 - 195 2.8e-08 Anti-Pycsar protein Apyc1
Lactamase_B_6 PF16661 41 - 204 1.6e-18 Metallo-beta-lactamase superfamily domain
Lactamase_B_2 PF12706 46 - 196 3.4e-07 Beta-lactamase superfamily domain
Beta-Casp PF10996 256 - 377 3.6e-30 Beta-Casp domain
RMMBL PF07521 392 - 445 1.6e-14 Zn-dependent metallo-hydrolase RNA specificity domain
CPSF73-100_C PF11718 487 - 687 4.4e-51 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1507
AccB7I CCANNNNNTGG 1 cut(s) 508
AccBSI CCGCTC 2 cut(s) 1180, 2038
AccII CGCG 2 cut(s) 49, 1229
AciI CCGC 8 cut(s) 304, 869, 910, 1032, 1178, 1433, 1467, 2038
AclWI GGATC 3 cut(s) 203, 736, 1733
AcoI YGGCCR 1 cut(s) 1119
AcsI RAATTY 2 cut(s) 925, 1634
AcuI CTGAAG 1 cut(s) 1709
AfaI GTAC 2 cut(s) 170, 1114
AfeI AGCGCT 1 cut(s) 2050
AfiI CCNNNNNNNGG 5 cut(s) 508, 715, 769, 1451, 1580
AflII CTTAAG 1 cut(s) 2009
AflIII ACRYGT 2 cut(s) 117, 733
AgsI TTSAA 8 cut(s) 298, 464, 641, 714, 946, 1028, 1249, 1641
AjiI CACGTC 1 cut(s) 734
AjnI CCWGG 3 cut(s) 1015, 1093, 1608
AleI CACNNNNGTG 1 cut(s) 1726
Alw21I GWGCWC 4 cut(s) 769, 1197, 1241, 1257
Alw26I GTCTC 1 cut(s) 1040
Alw44I GTGCAC 1 cut(s) 1193
AlwI GGATC 3 cut(s) 203, 736, 1733
AlwNI CAGNNNCTG 1 cut(s) 1550
Ama87I CYCGRG 1 cut(s) 172
Aor51HI AGCGCT 1 cut(s) 2050
AoxI GGCC 4 cut(s) 330, 499, 760, 1119
ApaLI GTGCAC 1 cut(s) 1193
ApeKI GCWGC 4 cut(s) 182, 260, 515, 599
ApoI RAATTY 2 cut(s) 925, 1634
AseI ATTAAT 1 cut(s) 1134
Asp700I GAANNNNTTC 3 cut(s) 692, 1487, 1619
AspLEI GCGC 2 cut(s) 1231, 2051
AspS9I GGNCC 2 cut(s) 760, 992
AsuC2I CCSGG 1 cut(s) 746
AsuHPI GGTGA 6 cut(s) 837, 1162, 1298, 1489, 1705, 1948
AvaI CYCGRG 1 cut(s) 172
AvaII GGWCC 1 cut(s) 992
BaeGI GKGCMC 1 cut(s) 1197
BalI TGGCCA 1 cut(s) 1121
BanI GGYRCC 1 cut(s) 1507
BanII GRGCYC 1 cut(s) 1257
BbsI GAAGAC 3 cut(s) 293, 588, 1016
Bbv12I GWGCWC 4 cut(s) 769, 1197, 1241, 1257
BbvI GCAGC 4 cut(s) 169, 272, 527, 611
BccI CCATC 6 cut(s) 47, 341, 459, 1003, 1334, 1943
BceAI ACGGC 2 cut(s) 510, 747
BciT130I CCWGG 3 cut(s) 1017, 1095, 1610
BcnI CCSGG 1 cut(s) 746
BcoDI GTCTC 1 cut(s) 1040
BfaI CTAG 1 cut(s) 1916
BfoI RGCGCY 1 cut(s) 2052
BfrI CTTAAG 1 cut(s) 2009
BglII AGATCT 1 cut(s) 814
BisI GCNGC 4 cut(s) 183, 261, 516, 600
BlpI GCTNAGC 2 cut(s) 603, 1962
BlsI GCNGC 4 cut(s) 184, 262, 517, 601
Bme1390I CCNGG 4 cut(s) 746, 1017, 1095, 1610
Bme18I GGWCC 1 cut(s) 992
BmeT110I CYCGRG 1 cut(s) 172
BmgBI CACGTC 1 cut(s) 734
BmgT120I GGNCC 2 cut(s) 760, 992
BmiI GGNNCC 2 cut(s) 85, 1509
BmrFI CCNGG 4 cut(s) 746, 1017, 1095, 1610
BmrI ACTGGG 2 cut(s) 767, 808
BmsI GCATC 5 cut(s) 272, 642, 851, 978, 1819
BmuI ACTGGG 2 cut(s) 767, 808
BpiI GAAGAC 3 cut(s) 293, 588, 1016
BpmI CTGGAG 3 cut(s) 302, 1038, 1631
Bpu10I CCTNAGC 2 cut(s) 723, 768
Bpu1102I GCTNAGC 2 cut(s) 603, 1962
BpuEI CTTGAG 1 cut(s) 1024
BpuMI CCSGG 1 cut(s) 746
Bsa29I ATCGAT 1 cut(s) 972
BsaBI GATNNNNATC 1 cut(s) 57
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 2 cut(s) 127, 1842
Bsc4I CCNNNNNNNGG 5 cut(s) 508, 715, 769, 1451, 1580
Bse1I ACTGG 5 cut(s) 762, 803, 916, 1122, 1938
Bse3DI GCAATG 1 cut(s) 1960
Bse8I GATNNNNATC 1 cut(s) 57
BseBI CCWGG 3 cut(s) 1017, 1095, 1610
BseCI ATCGAT 1 cut(s) 972
BseDI CCNNGG 2 cut(s) 127, 1842
BseGI GGATG 3 cut(s) 160, 1272, 1912
BseJI GATNNNNATC 1 cut(s) 57
BseLI CCNNNNNNNGG 5 cut(s) 508, 715, 769, 1451, 1580
BseMI GCAATG 1 cut(s) 1960
BseMII CTCAG 7 cut(s) 584, 594, 737, 782, 1392, 1571, 1976
BseNI ACTGG 5 cut(s) 762, 803, 916, 1122, 1938
BseSI GKGCMC 1 cut(s) 1197
BseXI GCAGC 4 cut(s) 169, 272, 527, 611
BsgI GTGCAG 1 cut(s) 534
Bsh1236I CGCG 2 cut(s) 49, 1229
BshFI GGCC 4 cut(s) 332, 501, 762, 1121
BshNI GGYRCC 1 cut(s) 1507
BshVI ATCGAT 1 cut(s) 972
BsiHKAI GWGCWC 4 cut(s) 769, 1197, 1241, 1257
BsiHKCI CYCGRG 1 cut(s) 172
BsiSI CCGG 2 cut(s) 87, 746
BslFI GGGAC 1 cut(s) 1787
BslI CCNNNNNNNGG 5 cut(s) 508, 715, 769, 1451, 1580
BsmAI GTCTC 1 cut(s) 1040
BsmFI GGGAC 1 cut(s) 1787
BsmI GAATGC 2 cut(s) 1084, 1999
BsnI GGCC 4 cut(s) 332, 501, 762, 1121
Bso31I GGTCTC 1 cut(s) 1040
BsoBI CYCGRG 1 cut(s) 172
Bsp1286I GDGCHC 4 cut(s) 769, 1197, 1241, 1257
Bsp143I GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
Bsp1720I GCTNAGC 2 cut(s) 603, 1962
Bsp68I TCGCGA 1 cut(s) 49
BspACI CCGC 8 cut(s) 304, 869, 910, 1032, 1178, 1433, 1467, 2038
BspANI GGCC 4 cut(s) 332, 501, 762, 1121
BspCNI CTCAG 7 cut(s) 585, 595, 736, 781, 1393, 1570, 1975
BspDI ATCGAT 1 cut(s) 972
BspFNI CGCG 2 cut(s) 49, 1229
BspHI TCATGA 3 cut(s) 312, 1356, 1678
BspLI GGNNCC 2 cut(s) 85, 1509
BspPI GGATC 3 cut(s) 203, 736, 1733
BspT107I GGYRCC 1 cut(s) 1507
BspTI CTTAAG 1 cut(s) 2009
BspTNI GGTCTC 1 cut(s) 1040
BsrBI CCGCTC 2 cut(s) 1180, 2038
BsrDI GCAATG 1 cut(s) 1960
BsrI ACTGG 5 cut(s) 762, 803, 916, 1122, 1938
BssECI CCNNGG 2 cut(s) 127, 1842
BssMI GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
Bst2UI CCWGG 3 cut(s) 1017, 1095, 1610
Bst4CI ACNGT 7 cut(s) 460, 718, 1286, 1373, 1462, 1552, 1693
Bst6I CTCTTC 2 cut(s) 25, 1842
BstAFI CTTAAG 1 cut(s) 2009
BstC8I GCNNGC 1 cut(s) 499
BstDEI CTNAG 9 cut(s) 593, 603, 723, 768, 1401, 1557, 1962, 2071, 2079
BstF5I GGATG 3 cut(s) 160, 1272, 1912
BstFNI CGCG 2 cut(s) 49, 1229
BstH2I RGCGCY 1 cut(s) 2052
BstHHI GCGC 2 cut(s) 1231, 2051
BstKTI GATC 8 cut(s) 61, 211, 256, 744, 817, 1356, 1741, 1812
BstMAI GTCTC 1 cut(s) 1040
BstMBI GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
BstMWI GCNNNNNNNGC 3 cut(s) 329, 1186, 1226
BstNI CCWGG 3 cut(s) 1017, 1095, 1610
BstNSI RCATGY 3 cut(s) 121, 323, 1189
BstSCI CCNGG 4 cut(s) 744, 1015, 1093, 1608
BstSLI GKGCMC 1 cut(s) 1197
BstUI CGCG 2 cut(s) 49, 1229
BstV1I GCAGC 4 cut(s) 169, 272, 527, 611
BstV2I GAAGAC 3 cut(s) 293, 588, 1016
BstX2I RGATCY 2 cut(s) 814, 1738
BstXI CCANNNNNNTGG 1 cut(s) 526
BstYI RGATCY 2 cut(s) 814, 1738
Bsu15I ATCGAT 1 cut(s) 972
BsuRI GGCC 4 cut(s) 332, 501, 762, 1121
BsuTUI ATCGAT 1 cut(s) 972
BtgZI GCGATG 1 cut(s) 1589
BtrI CACGTC 1 cut(s) 734
BtsCI GGATG 3 cut(s) 160, 1272, 1912
BtsIMutI CAGTG 6 cut(s) 696, 755, 1115, 1386, 1667, 1733
BtuMI TCGCGA 1 cut(s) 49
Cac8I GCNNGC 1 cut(s) 499
CaiI CAGNNNCTG 1 cut(s) 1550
CciI TCATGA 3 cut(s) 312, 1356, 1678
CfoI GCGC 2 cut(s) 1231, 2051
Cfr13I GGNCC 2 cut(s) 760, 992
ClaI ATCGAT 1 cut(s) 972
CsiI ACCWGGT 1 cut(s) 1093
Csp6I GTAC 2 cut(s) 169, 1113
CviQI GTAC 2 cut(s) 169, 1113
DdeI CTNAG 9 cut(s) 593, 603, 723, 768, 1401, 1557, 1962, 2071, 2079
DpnI GATC 8 cut(s) 60, 210, 255, 743, 816, 1355, 1740, 1811
DpnII GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
EaeI YGGCCR 1 cut(s) 1119
Eam1104I CTCTTC 2 cut(s) 25, 1842
EarI CTCTTC 2 cut(s) 25, 1842
EciI GGCGGA 1 cut(s) 1448
Ecl136II GAGCTC 1 cut(s) 1255
Eco24I GRGCYC 1 cut(s) 1257
Eco31I GGTCTC 1 cut(s) 1040
Eco47I GGWCC 1 cut(s) 992
Eco47III AGCGCT 1 cut(s) 2050
Eco53kI GAGCTC 1 cut(s) 1255
Eco57I CTGAAG 1 cut(s) 1709
Eco88I CYCGRG 1 cut(s) 172
EcoICRI GAGCTC 1 cut(s) 1255
EcoRII CCWGG 3 cut(s) 1015, 1093, 1608
EcoT22I ATGCAT 2 cut(s) 635, 844
EcoT38I GRGCYC 1 cut(s) 1257
FaqI GGGAC 1 cut(s) 1787
FauI CCCGC 2 cut(s) 297, 1460
FauNDI CATATG 1 cut(s) 629
Fnu4HI GCNGC 4 cut(s) 183, 261, 516, 600
FokI GGATG 3 cut(s) 147, 1259, 1919
FriOI GRGCYC 1 cut(s) 1257
Fsp4HI GCNGC 4 cut(s) 183, 261, 516, 600
FspBI CTAG 1 cut(s) 1916
GlaI GCGC 2 cut(s) 1230, 2050
GluI GCNGC 4 cut(s) 183, 261, 516, 600
GsuI CTGGAG 3 cut(s) 302, 1038, 1631
HaeII RGCGCY 1 cut(s) 2052
HaeIII GGCC 4 cut(s) 332, 501, 762, 1121
HapII CCGG 2 cut(s) 87, 746
HhaI GCGC 2 cut(s) 1231, 2051
Hin6I GCGC 2 cut(s) 1229, 2049
HinP1I GCGC 2 cut(s) 1229, 2049
HpaII CCGG 2 cut(s) 87, 746
HphI GGTGA 6 cut(s) 837, 1162, 1298, 1489, 1705, 1948
Hpy166II GTNNAC 7 cut(s) 115, 731, 874, 1115, 1195, 1282, 1491
Hpy8I GTNNAC 7 cut(s) 115, 731, 874, 1115, 1195, 1282, 1491
HpyAV CCTTC 3 cut(s) 133, 222, 1103
HpyCH4III ACNGT 7 cut(s) 460, 718, 1286, 1373, 1462, 1552, 1693
HpyCH4IV ACGT 2 cut(s) 733, 1241
HpyF10VI GCNNNNNNNGC 3 cut(s) 329, 1186, 1226
HpyF3I CTNAG 9 cut(s) 593, 603, 723, 768, 1401, 1557, 1962, 2071, 2079
HpySE526I ACGT 2 cut(s) 733, 1241
HspAI GCGC 2 cut(s) 1229, 2049
Kzo9I GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
LmnI GCTCC 3 cut(s) 83, 1180, 1583
Lsp1109I GCAGC 4 cut(s) 169, 272, 527, 611
LweI GCATC 5 cut(s) 272, 642, 851, 978, 1819
MabI ACCWGGT 1 cut(s) 1093
MaeI CTAG 1 cut(s) 1916
MaeII ACGT 2 cut(s) 733, 1241
MaeIII GTNAC 6 cut(s) 70, 488, 1150, 1552, 1687, 1748
MalI GATC 8 cut(s) 60, 210, 255, 743, 816, 1355, 1740, 1811
MbiI CCGCTC 2 cut(s) 1180, 2038
MboI GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
MflI RGATCY 2 cut(s) 814, 1738
MhlI GDGCHC 4 cut(s) 769, 1197, 1241, 1257
MlsI TGGCCA 1 cut(s) 1121
MluNI TGGCCA 1 cut(s) 1121
MlyI GAGTC 4 cut(s) 1147, 1385, 1712, 1757
Mox20I TGGCCA 1 cut(s) 1121
Mph1103I ATGCAT 2 cut(s) 635, 844
MroXI GAANNNNTTC 3 cut(s) 692, 1487, 1619
MscI TGGCCA 1 cut(s) 1121
MseI TTAA 6 cut(s) 962, 981, 1134, 1325, 1395, 2010
MslI CAYNNNNRTG 4 cut(s) 524, 681, 1190, 1726
Msp20I TGGCCA 1 cut(s) 1121
MspA1I CMGCKG 3 cut(s) 602, 1059, 1966
MspCI CTTAAG 1 cut(s) 2009
MspI CCGG 2 cut(s) 87, 746
MspR9I CCNGG 4 cut(s) 746, 1017, 1095, 1610
Mva1269I GAATGC 2 cut(s) 1084, 1999
MvaI CCWGG 3 cut(s) 1017, 1095, 1610
MvnI CGCG 2 cut(s) 49, 1229
MwoI GCNNNNNNNGC 3 cut(s) 329, 1186, 1226
NciI CCSGG 1 cut(s) 746
NdeI CATATG 1 cut(s) 629
NdeII GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
NlaIV GGNNCC 2 cut(s) 85, 1509
NmeAIII GCCGAG 1 cut(s) 1820
NmuCI GTSAC 2 cut(s) 1150, 1748
NruI TCGCGA 1 cut(s) 49
NsiI ATGCAT 2 cut(s) 635, 844
NspI RCATGY 3 cut(s) 121, 323, 1189
OliI CACNNNNGTG 1 cut(s) 1726
PagI TCATGA 3 cut(s) 312, 1356, 1678
PciI ACATGT 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 679
PctI GAATGC 2 cut(s) 1084, 1999
PdmI GAANNNNTTC 3 cut(s) 692, 1487, 1619
PfeI GAWTC 9 cut(s) 157, 549, 641, 784, 906, 1471, 1652, 1780, 2041
PflMI CCANNNNNTGG 1 cut(s) 508
PfoI TCCNGGA 1 cut(s) 1015
PkrI GCNGC 4 cut(s) 184, 262, 517, 601
PleI GAGTC 4 cut(s) 1147, 1384, 1711, 1757
PpsI GAGTC 4 cut(s) 1147, 1384, 1711, 1757
PscI ACATGT 1 cut(s) 117
PshBI ATTAAT 1 cut(s) 1134
Psp124BI GAGCTC 1 cut(s) 1257
Psp6I CCWGG 3 cut(s) 1015, 1093, 1608
PspGI CCWGG 3 cut(s) 1015, 1093, 1608
PspN4I GGNNCC 2 cut(s) 85, 1509
PspPI GGNCC 2 cut(s) 760, 992
PstNI CAGNNNCTG 1 cut(s) 1550
PsuI RGATCY 2 cut(s) 814, 1738
PvuII CAGCTG 3 cut(s) 602, 1059, 1966
RruI TCGCGA 1 cut(s) 49
RsaI GTAC 2 cut(s) 170, 1114
RsaNI GTAC 2 cut(s) 169, 1113
RseI CAYNNNNRTG 4 cut(s) 524, 681, 1190, 1726
SacI GAGCTC 1 cut(s) 1257
SaqAI TTAA 6 cut(s) 962, 981, 1134, 1325, 1395, 2010
SatI GCNGC 4 cut(s) 183, 261, 516, 600
Sau3AI GATC 8 cut(s) 58, 208, 253, 741, 814, 1353, 1738, 1809
Sau96I GGNCC 2 cut(s) 760, 992
SchI GAGTC 4 cut(s) 1147, 1385, 1712, 1757
ScrFI CCNGG 4 cut(s) 746, 1017, 1095, 1610
SduI GDGCHC 4 cut(s) 769, 1197, 1241, 1257
SexAI ACCWGGT 1 cut(s) 1093
SfaNI GCATC 5 cut(s) 272, 642, 851, 978, 1819
SinI GGWCC 1 cut(s) 992
SmiMI CAYNNNNRTG 4 cut(s) 524, 681, 1190, 1726
SmlI CTYRAG 2 cut(s) 1039, 2009
SmoI CTYRAG 2 cut(s) 1039, 2009
SsiI CCGC 8 cut(s) 304, 869, 910, 1032, 1178, 1433, 1467, 2038
SspI AATATT 1 cut(s) 139
SspMI CTAG 1 cut(s) 1916
SstI GAGCTC 1 cut(s) 1257
StyD4I CCNGG 4 cut(s) 744, 1015, 1093, 1608
TaaI ACNGT 7 cut(s) 460, 718, 1286, 1373, 1462, 1552, 1693
TaiI ACGT 2 cut(s) 736, 1244
TaqI TCGA 5 cut(s) 198, 399, 972, 1623, 1947
TaqII GACCGA 2 cut(s) 600, 980
TfiI GAWTC 9 cut(s) 157, 549, 641, 784, 906, 1471, 1652, 1780, 2041
Tru1I TTAA 6 cut(s) 962, 981, 1134, 1325, 1395, 2010
Tru9I TTAA 6 cut(s) 962, 981, 1134, 1325, 1395, 2010
TscAI CASTG 6 cut(s) 703, 762, 1122, 1386, 1674, 1733
TseFI GTSAC 2 cut(s) 1150, 1748
TseI GCWGC 4 cut(s) 182, 260, 515, 599
Tsp45I GTSAC 2 cut(s) 1150, 1748
TspGWI ACGGA 2 cut(s) 66, 924
TspRI CASTG 6 cut(s) 703, 762, 1122, 1386, 1674, 1733
Van91I CCANNNNNTGG 1 cut(s) 508
Vha464I CTTAAG 1 cut(s) 2009
VneI GTGCAC 1 cut(s) 1193
VpaK11BI GGWCC 1 cut(s) 992
VspI ATTAAT 1 cut(s) 1134
XapI RAATTY 2 cut(s) 925, 1634
XceI RCATGY 3 cut(s) 121, 323, 1189
XcmI CCANNNNNNNNNTGG 4 cut(s) 526, 862, 1426, 1813
XmnI GAANNNNTTC 3 cut(s) 692, 1487, 1619
XspI CTAG 1 cut(s) 1916
Zsp2I ATGCAT 2 cut(s) 635, 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.