Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002002.1

Orthogroup ID

OG0002312

Physical Location & Seq

Genomic Coordinates Forward (+)

53054 .. 58894

Gene Structure 5841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002002.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

atgagccgggctggggtggcccgttatgggatagcacttggaaatcttgataggggtgttggtgttcttaagcaactttattctgtcgtcttttcggcatcgaaaagacaaaatcacctacttagcagtgatttacgaaggagaagattgataagatcaagaggctggacatcccaacttgcagataattggtttgactgtgttcgaaattcacggcttggattagcagaagactacagattcagttttaccaaaatggcttcgatggggggacaaaagaggcgtgaagcatcatcgtcttcagcagcaaaacaggaggataagctgattgtgactccgttaggaggtggtagcgaagttggtcgctcgtgcgtgtacatgtcctacaaaggcaaaaatgtcttgtttgattgcggaatcaatcccgctttctcgggcatggctgctttgccctactttgatgagattgatccttccacaattgatgtccttctcataacccattttcacttggatcatgctgcatccctaccttacttccttcagaagaccactttcaagggccgagtctttatgacttatgctacaaaggctatctataggttgcttttggcagattatatgaaagtgagcaaagtttcagttgaagatatgttgttcgatgagaaggacatagctgcttctacggataaaattgaggttattgatttccaccaaacagtagaagttgagggcatccggttttggtgctacactgcaggtcatgtccttggtgctgctatgttcatggttgatattgccggtgttagggtcctctacactggagattattcacgtgaagaagaccgacacctccatgctgctgagatgccacagttctcccctgatatatgcatcattgagtccacatttggtgtccagcaccatcaacctcgaaacgtccgagagaagcgattcactgaagctatacacacagcaatctctcgagggggtcgtgtcttaattcctgcatatgcacttggccgtgcccaagaacttctcctgattcttgatgagtattggtcaaaccatcccgagctccataatattcctatatattatgcttccccactggcaaaaaaatgtttgtctgtttatgagacgtacaccctttcaatgaacgataggatccgcaatgccaagtcaaatcccttcatcttcactcatatatcaccattaaacagtgttgagaatttcaaagatgtgggcccctcagtggtgatggcaagccctggtactcttcaaagcgggctgtcaaggcagctatttgataagtggtgctctgataagagaaatgcgtgtgtgattccgggttatgtgattgaggggacacttgctaagacaatcatgaatgaaccgaaagaggttacccttatgaatgggcttgccgctcctctcaacatgtcaatccattacatttcattcgctgctcatgcagattctgttcagacatgtgcatttttggaggagctgaggcctcctaacataatccttgttcatggagaagctcatgagatgggaaggctgaaagagaagctcatgactcaatttcgtgatcgcaacacaaaaatcctcacaccaaagaattgtcagtctgttgaaatgtattttaactcgcagaaaatggctaaagctattggaaggcttgctgagagaaccccggaagttggtgaaacagtcggcggtttactggttaaaaaaggtttcagttatcagataatggcctctgaagatcttcatgtgttctcacagctgtccacggcaaatgtcactcaacgtattactatcccgtatactactggcttcatggtgataagacatcggctgaggcaaatgtatgagagcgtagaatcttctgtggatgaggaatctggagtgccgacgttgcgagtgcatgatcgagtgactgtgaggcaggatacagataaacatgtttcactgcattggatgtcagatcctataagtgacatggtgtcagactccattgtggctctaattttgaatatcaacagagaagtccccaaggtagtcattgaatcggaagatataacaacagaggaagagaatgggaggaagacggaaaaggtcattcgtgcacttcttgtatcactctttggggatgtgaagcctggagaaaatgggaagttggtgatcagtgttgatggaaatgtggcgcagcttgataaacagagtggggacgttgaaagtgaaaatgaaggcctcaaggaaagagtacagacagcatttcgtcgaatccaaagtgcggtgaaaccaattcctctttcttcatcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016073 GO:0016180 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF73-100_C Lactamase_B Lactamase_B_6 RMMBL

Protein Analysis

777

Amino Acids

87.12

Weight (kDa)

7.64

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61010 AT1G61010 AT1G61010 AT1G61010 AT1G61010
fragaria_vesca	FvH4_4g07000 FvH4_4g07000 FvH4_5g28761 FvH4_5g28770 FvH4_7g26770
malus_domestica	MD08G1237400.v1.1 MD15G1429300.v1.1
prunus_persica	Prupe.1G574800_v2.0.a1 Prupe.1G574800_v2.0.a1 Prupe.1G574900_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006200_v2.0.a1
pyrus_communis	pycom08g20590 pycom08g20600 pycom15g37980 pycom15g37990
rosa_chinensis	RchiOBHm_Chr1g0363271 RchiOBHm_Chr4g0399131 RchiOBHm_Chr7g0220981
rosa_laevigata	RLG00000002186 RLG00000009298
rosa_multiflora	Rmu_sc0002002.1_g000015 Rmu_sc0002105.1_g000022
rosa_roxburghii	Rroxscaffold_3G00238830 Rroxscaffold_5G00344090
rosa_rugosa	Rorug04G0014100 Rorug07G0199100
rosa_samantha	Rh1DG309200 Rh4BG089900 Rh4DG084500 Rh7AG339000 Rh7BG329800 Rh7CG357100 Rh7DG337800
rosa_wichuraiana	Rw4G007590 Rw7G028840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	749
AccBSI	CCGCTC	1 cut(s)	1430
AccI	GTMKAC	1 cut(s)	1832
AciI	CCGC	7 cut(s)	414, 426, 1171, 1287, 1428, 1722, 2303
AclWI	GGATC	5 cut(s)	464, 522, 1162, 1175, 1988
AcoI	YGGCCR	1 cut(s)	1021
AcsI	RAATTY	2 cut(s)	208, 1231
AcuI	CTGAAG	4 cut(s)	285, 527, 981, 1788
AcvI	CACGTG	1 cut(s)	836
AfaI	GTAC	4 cut(s)	377, 1145, 1276, 2274
AfiI	CCNNNNNNNGG	7 cut(s)	13, 27, 344, 807, 1255, 1706, 2302
AflII	CTTAAG	1 cut(s)	68
AflIII	ACRYGT	4 cut(s)	378, 1440, 1490, 1969
AgsI	TTSAA	9 cut(s)	559, 647, 1155, 1237, 1283, 1640, 2041, 2075, 2243
AhdI	GACNNNNNGTC	1 cut(s)	2011
AjnI	CCWGG	2 cut(s)	1270, 2167
AjuI	GAANNNNNNNTTGG	1 cut(s)	2305
Alw21I	GWGCWC	3 cut(s)	1080, 1322, 2137
Alw26I	GTCTC	1 cut(s)	1133
Alw44I	GTGCAC	1 cut(s)	2133
AlwI	GGATC	5 cut(s)	464, 522, 1162, 1175, 1988
AlwNI	CAGNNNCTG	1 cut(s)	1481
Ama87I	CYCGRG	3 cut(s)	433, 984, 1073
AoxI	GGCC	7 cut(s)	18, 562, 1021, 1246, 1514, 1761, 2257
ApaI	GGGCCC	1 cut(s)	1250
ApaLI	GTGCAC	1 cut(s)	2133
ApeKI	GCWGC	9 cut(s)	305, 443, 521, 677, 776, 860, 1300, 1466, 2215
ApoI	RAATTY	2 cut(s)	208, 1231
Asp700I	GAANNNNTTC	2 cut(s)	953, 1773
AspLEI	GCGC	1 cut(s)	2215
AspS9I	GGNCC	5 cut(s)	19, 562, 811, 1246, 1247
AsuC2I	CCSGG	3 cut(s)	8, 1350, 1700
AsuHPI	GGTGA	7 cut(s)	107, 1203, 1270, 1721, 1861, 2200, 2317
AsuII	TTCGAA	1 cut(s)	205
AvaI	CYCGRG	3 cut(s)	433, 984, 1073
AvaII	GGWCC	1 cut(s)	811
BaeGI	GKGCMC	3 cut(s)	1030, 1250, 2137
BamHI	GGATCC	1 cut(s)	1167
BanII	GRGCYC	2 cut(s)	1080, 1250
BauI	CACGAG	1 cut(s)	367
BbrPI	CACGTG	1 cut(s)	836
BbsI	GAAGAC	5 cut(s)	237, 291, 554, 849, 2120
Bbv12I	GWGCWC	3 cut(s)	1080, 1322, 2137
BbvCI	CCTCAGC	2 cut(s)	1511, 1865
BbvI	GCAGC	9 cut(s)	317, 430, 508, 664, 763, 847, 1312, 1453, 2227
BccI	CCATC	6 cut(s)	259, 933, 1077, 1255, 1549, 2195
BceAI	ACGGC	3 cut(s)	230, 1008, 1815
BciT130I	CCWGG	2 cut(s)	1272, 2169
BciVI	GTATCC	1 cut(s)	1951
BclI	TGATCA	1 cut(s)	2190
BcnI	CCSGG	3 cut(s)	8, 1350, 1700
BcoDI	GTCTC	1 cut(s)	1133
BfmI	CTRYAG	3 cut(s)	235, 598, 756
BfrI	CTTAAG	1 cut(s)	68
BfuAI	ACCTGC	1 cut(s)	749
BfuI	GTATCC	1 cut(s)	1951
BglII	AGATCT	1 cut(s)	1771
Bme1390I	CCNGG	5 cut(s)	8, 1272, 1350, 1700, 2169
Bme18I	GGWCC	1 cut(s)	811
BmeRI	GACNNNNNGTC	1 cut(s)	2011
BmeT110I	CYCGRG	3 cut(s)	433, 984, 1073
BmgT120I	GGNCC	5 cut(s)	19, 562, 811, 1246, 1247
BmiI	GGNNCC	4 cut(s)	812, 1169, 1248, 1249
BmrFI	CCNGG	5 cut(s)	8, 1272, 1350, 1700, 2169
BmsI	GCATC	6 cut(s)	107, 299, 533, 744, 858, 903
BpiI	GAAGAC	5 cut(s)	237, 291, 554, 849, 2120
BpmI	CTGGAG	3 cut(s)	843, 1932, 2190
Bpu10I	CCTNAGC	2 cut(s)	1511, 1865
Bpu14I	TTCGAA	1 cut(s)	205
BpuEI	CTTGAG	1 cut(s)	2246
BpuMI	CCSGG	3 cut(s)	8, 1350, 1700
BsaAI	YACGTR	1 cut(s)	836
BsaJI	CCNNGG	5 cut(s)	769, 1270, 1698, 1797, 2061
BsaWI	WCCGGW	1 cut(s)	738
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 27, 344, 807, 1255, 1706, 2302
Bse118I	RCCGGY	1 cut(s)	800
Bse1I	ACTGG	4 cut(s)	826, 1116, 1734, 1843
Bse3DI	GCAATG	1 cut(s)	1180
BseBI	CCWGG	2 cut(s)	1272, 2169
BseDI	CCNNGG	5 cut(s)	769, 1270, 1698, 1797, 2061
BseGI	GGATG	7 cut(s)	170, 524, 735, 1069, 1906, 1992, 2164
BseLI	CCNNNNNNNGG	7 cut(s)	13, 27, 344, 807, 1255, 1706, 2302
BseMI	GCAATG	1 cut(s)	1180
BseMII	CTCAG	5 cut(s)	855, 1266, 1502, 1680, 1856
BseNI	ACTGG	4 cut(s)	826, 1116, 1734, 1843
BseRI	GAGGAG	2 cut(s)	1422, 1520
BseSI	GKGCMC	3 cut(s)	1030, 1250, 2137
BseXI	GCAGC	9 cut(s)	317, 430, 508, 664, 763, 847, 1312, 1453, 2227
BseYI	CCCAGC	1 cut(s)	11
BshFI	GGCC	7 cut(s)	20, 564, 1023, 1248, 1516, 1763, 2259
BsiHKAI	GWGCWC	3 cut(s)	1080, 1322, 2137
BsiHKCI	CYCGRG	3 cut(s)	433, 984, 1073
BsiSI	CCGG	5 cut(s)	7, 739, 801, 1349, 1700
BslFI	GGGAC	4 cut(s)	285, 1381, 2042, 2249
BslI	CCNNNNNNNGG	7 cut(s)	13, 27, 344, 807, 1255, 1706, 2302
BsmAI	GTCTC	1 cut(s)	1133
BsmBI	CGTCTC	1 cut(s)	1133
BsmFI	GGGAC	4 cut(s)	285, 1381, 2042, 2249
BsnI	GGCC	7 cut(s)	20, 564, 1023, 1248, 1516, 1763, 2259
BsoBI	CYCGRG	3 cut(s)	433, 984, 1073
Bsp119I	TTCGAA	1 cut(s)	205
Bsp120I	GGGCCC	1 cut(s)	1246
Bsp1286I	GDGCHC	5 cut(s)	1030, 1080, 1250, 1322, 2137
Bsp1407I	TGTACA	1 cut(s)	375
Bsp143I	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
BspACI	CCGC	7 cut(s)	414, 426, 1171, 1287, 1428, 1722, 2303
BspANI	GGCC	7 cut(s)	20, 564, 1023, 1248, 1516, 1763, 2259
BspCNI	CTCAG	5 cut(s)	856, 1265, 1503, 1681, 1857
BspHI	TCATGA	3 cut(s)	1386, 1549, 1578
BspLI	GGNNCC	4 cut(s)	812, 1169, 1248, 1249
BspMAI	CTGCAG	1 cut(s)	760
BspMI	ACCTGC	1 cut(s)	749
BspPI	GGATC	5 cut(s)	464, 522, 1162, 1175, 1988
BspT104I	TTCGAA	1 cut(s)	205
BspTI	CTTAAG	1 cut(s)	68
BsrBI	CCGCTC	1 cut(s)	1430
BsrDI	GCAATG	1 cut(s)	1180
BsrFI	RCCGGY	1 cut(s)	800
BsrGI	TGTACA	1 cut(s)	375
BsrI	ACTGG	4 cut(s)	826, 1116, 1734, 1843
BssAI	RCCGGY	1 cut(s)	800
BssECI	CCNNGG	5 cut(s)	769, 1270, 1698, 1797, 2061
BssMI	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
BssNAI	GTATAC	1 cut(s)	1833
BssSI	CACGAG	1 cut(s)	367
BssT1I	CCWWGG	2 cut(s)	769, 2061
Bst1107I	GTATAC	1 cut(s)	1833
Bst2BI	CACGAG	1 cut(s)	367
Bst2UI	CCWGG	2 cut(s)	1272, 2169
Bst4CI	ACNGT	6 cut(s)	200, 721, 876, 1223, 1717, 1948
Bst6I	CTCTTC	2 cut(s)	1284, 2094
BstAFI	CTTAAG	1 cut(s)	68
BstAUI	TGTACA	1 cut(s)	375
BstBAI	YACGTR	1 cut(s)	836
BstBI	TTCGAA	1 cut(s)	205
BstC8I	GCNNGC	4 cut(s)	1267, 1289, 1425, 1686
BstDEI	CTNAG	8 cut(s)	122, 864, 1252, 1377, 1511, 1689, 1865, 2331
BstDSI	CCRYGG	1 cut(s)	1797
BstEII	GGTNACC	1 cut(s)	1405
BstF5I	GGATG	7 cut(s)	170, 524, 735, 1069, 1906, 1992, 2164
BstHHI	GCGC	1 cut(s)	2215
BstKTI	GATC	9 cut(s)	158, 472, 517, 1170, 1597, 1774, 1939, 1996, 2193
BstMAI	GTCTC	1 cut(s)	1133
BstMBI	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
BstMWI	GCNNNNNNNGC	5 cut(s)	17, 590, 1297, 1472, 1924
BstNI	CCWGG	2 cut(s)	1272, 2169
BstNSI	RCATGY	4 cut(s)	382, 1444, 1494, 1973
BstPI	GGTNACC	1 cut(s)	1405
BstSCI	CCNGG	5 cut(s)	6, 1270, 1348, 1698, 2167
BstSFI	CTRYAG	3 cut(s)	235, 598, 756
BstSLI	GKGCMC	3 cut(s)	1030, 1250, 2137
BstV1I	GCAGC	9 cut(s)	317, 430, 508, 664, 763, 847, 1312, 1453, 2227
BstV2I	GAAGAC	5 cut(s)	237, 291, 554, 849, 2120
BstX2I	RGATCY	3 cut(s)	1167, 1771, 1993
BstYI	RGATCY	3 cut(s)	1167, 1771, 1993
BstZ17I	GTATAC	1 cut(s)	1833
BsuI	GTATCC	1 cut(s)	1951
BsuRI	GGCC	7 cut(s)	20, 564, 1023, 1248, 1516, 1763, 2259
BtgI	CCRYGG	1 cut(s)	1797
BtsCI	GGATG	7 cut(s)	170, 524, 735, 1069, 1906, 1992, 2164
BtsI	GCAGTG	3 cut(s)	133, 753, 1976
BtsIMutI	CAGTG	9 cut(s)	133, 753, 819, 957, 1109, 1228, 1260, 1976, 2200
BveI	ACCTGC	1 cut(s)	749
Cac8I	GCNNGC	4 cut(s)	1267, 1289, 1425, 1686
CaiI	CAGNNNCTG	1 cut(s)	1481
CciI	TCATGA	3 cut(s)	1386, 1549, 1578
CfoI	GCGC	1 cut(s)	2215
Cfr10I	RCCGGY	1 cut(s)	800
Cfr13I	GGNCC	5 cut(s)	19, 562, 811, 1246, 1247
Csp6I	GTAC	4 cut(s)	376, 1144, 1275, 2273
CviQI	GTAC	4 cut(s)	376, 1144, 1275, 2273
DdeI	CTNAG	8 cut(s)	122, 864, 1252, 1377, 1511, 1689, 1865, 2331
DpnI	GATC	9 cut(s)	157, 471, 516, 1169, 1596, 1773, 1938, 1995, 2192
DpnII	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
DriI	GACNNNNNGTC	1 cut(s)	2011
EaeI	YGGCCR	1 cut(s)	1021
Eam1104I	CTCTTC	2 cut(s)	1284, 2094
Eam1105I	GACNNNNNGTC	1 cut(s)	2011
EarI	CTCTTC	2 cut(s)	1284, 2094
Ecl136II	GAGCTC	1 cut(s)	1078
Eco130I	CCWWGG	2 cut(s)	769, 2061
Eco147I	AGGCCT	2 cut(s)	1516, 2259
Eco24I	GRGCYC	2 cut(s)	1080, 1250
Eco47I	GGWCC	1 cut(s)	811
Eco53kI	GAGCTC	1 cut(s)	1078
Eco57I	CTGAAG	4 cut(s)	285, 527, 981, 1788
Eco72I	CACGTG	1 cut(s)	836
Eco88I	CYCGRG	3 cut(s)	433, 984, 1073
Eco91I	GGTNACC	1 cut(s)	1405
EcoICRI	GAGCTC	1 cut(s)	1078
EcoO109I	RGGNCCY	2 cut(s)	811, 1247
EcoO65I	GGTNACC	1 cut(s)	1405
EcoRII	CCWGG	2 cut(s)	1270, 2167
EcoT14I	CCWWGG	2 cut(s)	769, 2061
EcoT22I	ATGCAT	1 cut(s)	896
EcoT38I	GRGCYC	2 cut(s)	1080, 1250
ErhI	CCWWGG	2 cut(s)	769, 2061
Esp3I	CGTCTC	1 cut(s)	1133
FaqI	GGGAC	4 cut(s)	285, 1381, 2042, 2249
FauI	CCCGC	2 cut(s)	433, 1280
FauNDI	CATATG	1 cut(s)	1012
FbaI	TGATCA	1 cut(s)	2190
FblI	GTMKAC	1 cut(s)	1832
FokI	GGATG	7 cut(s)	157, 511, 722, 1056, 1913, 1999, 2171
FriOI	GRGCYC	2 cut(s)	1080, 1250
GlaI	GCGC	1 cut(s)	2214
GsaI	CCCAGC	1 cut(s)	15
GsuI	CTGGAG	3 cut(s)	843, 1932, 2190
HaeIII	GGCC	7 cut(s)	20, 564, 1023, 1248, 1516, 1763, 2259
HapII	CCGG	5 cut(s)	7, 739, 801, 1349, 1700
HhaI	GCGC	1 cut(s)	2215
Hin6I	GCGC	1 cut(s)	2213
HinP1I	GCGC	1 cut(s)	2213
HpaII	CCGG	5 cut(s)	7, 739, 801, 1349, 1700
HphI	GGTGA	7 cut(s)	107, 1203, 1270, 1721, 1861, 2200, 2317
Hpy166II	GTNNAC	7 cut(s)	376, 906, 1146, 1727, 1797, 1833, 2135
Hpy188I	TCNGA	9 cut(s)	546, 944, 1324, 1488, 1755, 1768, 1993, 2017, 2080
Hpy8I	GTNNAC	7 cut(s)	376, 906, 1146, 1727, 1797, 1833, 2135
Hpy99I	CGWCG	2 cut(s)	1924, 2292
HpyAV	CCTTC	9 cut(s)	132, 483, 500, 551, 661, 1201, 1554, 1674, 2249
HpyCH4III	ACNGT	6 cut(s)	200, 721, 876, 1223, 1717, 1948
HpyCH4IV	ACGT	6 cut(s)	835, 939, 1142, 1816, 1922, 2238
HpyF10VI	GCNNNNNNNGC	5 cut(s)	17, 590, 1297, 1472, 1924
HpyF3I	CTNAG	8 cut(s)	122, 864, 1252, 1377, 1511, 1689, 1865, 2331
HpySE526I	ACGT	6 cut(s)	835, 939, 1142, 1816, 1922, 2238
HspAI	GCGC	1 cut(s)	2213
Ksp22I	TGATCA	1 cut(s)	2190
Kzo9I	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
LmnI	GCTCC	3 cut(s)	1083, 1435, 1507
Lsp1109I	GCAGC	9 cut(s)	317, 430, 508, 664, 763, 847, 1312, 1453, 2227
LweI	GCATC	6 cut(s)	107, 299, 533, 744, 858, 903
MaeII	ACGT	6 cut(s)	835, 939, 1142, 1816, 1922, 2238
MaeIII	GTNAC	5 cut(s)	331, 1405, 1807, 1942, 2003
MalI	GATC	9 cut(s)	157, 471, 516, 1169, 1596, 1773, 1938, 1995, 2192
MbiI	CCGCTC	1 cut(s)	1430
MboI	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
MfeI	CAATTG	1 cut(s)	480
MflI	RGATCY	3 cut(s)	1167, 1771, 1993
MhlI	GDGCHC	5 cut(s)	1030, 1080, 1250, 1322, 2137
MlyI	GAGTC	5 cut(s)	328, 576, 911, 1576, 2012
Mph1103I	ATGCAT	1 cut(s)	896
MroXI	GAANNNNTTC	2 cut(s)	953, 1773
MseI	TTAA	5 cut(s)	69, 1001, 1217, 1650, 1734
MslI	CAYNNNNRTG	1 cut(s)	855
MspA1I	CMGCKG	1 cut(s)	1792
MspCI	CTTAAG	1 cut(s)	68
MspI	CCGG	5 cut(s)	7, 739, 801, 1349, 1700
MspR9I	CCNGG	5 cut(s)	8, 1272, 1350, 1700, 2169
MunI	CAATTG	1 cut(s)	480
MvaI	CCWGG	2 cut(s)	1272, 2169
MwoI	GCNNNNNNNGC	5 cut(s)	17, 590, 1297, 1472, 1924
NciI	CCSGG	3 cut(s)	8, 1350, 1700
NdeI	CATATG	1 cut(s)	1012
NdeII	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
NlaIV	GGNNCC	4 cut(s)	812, 1169, 1248, 1249
NmeAIII	GCCGAG	1 cut(s)	590
NmuCI	GTSAC	4 cut(s)	331, 1807, 1942, 2003
NsiI	ATGCAT	1 cut(s)	896
NspI	RCATGY	4 cut(s)	382, 1444, 1494, 1973
NspV	TTCGAA	1 cut(s)	205
PaeR7I	CTCGAG	1 cut(s)	984
PagI	TCATGA	3 cut(s)	1386, 1549, 1578
PceI	AGGCCT	2 cut(s)	1516, 2259
PciI	ACATGT	4 cut(s)	378, 1440, 1490, 1969
PcsI	WCGNNNNNNNCGW	2 cut(s)	940, 991
PdmI	GAANNNNTTC	2 cut(s)	953, 1773
PleI	GAGTC	5 cut(s)	328, 575, 910, 1576, 2012
PmaCI	CACGTG	1 cut(s)	836
PmlI	CACGTG	1 cut(s)	836
PpsI	GAGTC	5 cut(s)	328, 575, 910, 1576, 2012
Ppu21I	YACGTR	1 cut(s)	836
PpuMI	RGGWCCY	1 cut(s)	811
PscI	ACATGT	4 cut(s)	378, 1440, 1490, 1969
Psp124BI	GAGCTC	1 cut(s)	1080
Psp5II	RGGWCCY	1 cut(s)	811
Psp6I	CCWGG	2 cut(s)	1270, 2167
PspCI	CACGTG	1 cut(s)	836
PspEI	GGTNACC	1 cut(s)	1405
PspFI	CCCAGC	1 cut(s)	11
PspGI	CCWGG	2 cut(s)	1270, 2167
PspN4I	GGNNCC	4 cut(s)	812, 1169, 1248, 1249
PspOMI	GGGCCC	1 cut(s)	1246
PspPI	GGNCC	5 cut(s)	19, 562, 811, 1246, 1247
PspPPI	RGGWCCY	1 cut(s)	811
PstI	CTGCAG	1 cut(s)	760
PstNI	CAGNNNCTG	1 cut(s)	1481
PsuI	RGATCY	3 cut(s)	1167, 1771, 1993
PvuII	CAGCTG	1 cut(s)	1792
RsaI	GTAC	4 cut(s)	377, 1145, 1276, 2274
RsaNI	GTAC	4 cut(s)	376, 1144, 1275, 2273
RseI	CAYNNNNRTG	1 cut(s)	855
SacI	GAGCTC	1 cut(s)	1080
SaqAI	TTAA	5 cut(s)	69, 1001, 1217, 1650, 1734
Sau3AI	GATC	9 cut(s)	155, 469, 514, 1167, 1594, 1771, 1936, 1993, 2190
Sau96I	GGNCC	5 cut(s)	19, 562, 811, 1246, 1247
SchI	GAGTC	5 cut(s)	328, 576, 911, 1576, 2012
ScrFI	CCNGG	5 cut(s)	8, 1272, 1350, 1700, 2169
SduI	GDGCHC	5 cut(s)	1030, 1080, 1250, 1322, 2137
SfaNI	GCATC	6 cut(s)	107, 299, 533, 744, 858, 903
SfcI	CTRYAG	3 cut(s)	235, 598, 756
Sfr274I	CTCGAG	1 cut(s)	984
SfuI	TTCGAA	1 cut(s)	205
SinI	GGWCC	1 cut(s)	811
SlaI	CTCGAG	1 cut(s)	984
SmiMI	CAYNNNNRTG	1 cut(s)	855
SmlI	CTYRAG	3 cut(s)	68, 984, 2261
SmoI	CTYRAG	3 cut(s)	68, 984, 2261
SseBI	AGGCCT	2 cut(s)	1516, 2259
SsiI	CCGC	7 cut(s)	414, 426, 1171, 1287, 1428, 1722, 2303
SspI	AATATT	1 cut(s)	1087
SstI	GAGCTC	1 cut(s)	1080
StuI	AGGCCT	2 cut(s)	1516, 2259
StyD4I	CCNGG	5 cut(s)	6, 1270, 1348, 1698, 2167
StyI	CCWWGG	2 cut(s)	769, 2061
TaaI	ACNGT	6 cut(s)	200, 721, 876, 1223, 1717, 1948
TaiI	ACGT	6 cut(s)	838, 942, 1145, 1819, 1925, 2241
TaqI	TCGA	8 cut(s)	101, 205, 263, 660, 934, 985, 1939, 2290
TaqII	GACCGA	1 cut(s)	861
TatI	WGTACW	2 cut(s)	375, 2272
TauI	GCSGC	1 cut(s)	1430
Tru1I	TTAA	5 cut(s)	69, 1001, 1217, 1650, 1734
Tru9I	TTAA	5 cut(s)	69, 1001, 1217, 1650, 1734
TscAI	CASTG	9 cut(s)	133, 760, 826, 964, 1116, 1228, 1260, 1983, 2200
TseFI	GTSAC	4 cut(s)	331, 1807, 1942, 2003
TseI	GCWGC	9 cut(s)	305, 443, 521, 677, 776, 860, 1300, 1466, 2215
Tsp45I	GTSAC	4 cut(s)	331, 1807, 1942, 2003
TspGWI	ACGGA	3 cut(s)	327, 701, 2132
TspRI	CASTG	9 cut(s)	133, 760, 826, 964, 1116, 1228, 1260, 1983, 2200
Vha464I	CTTAAG	1 cut(s)	68
VneI	GTGCAC	1 cut(s)	2133
VpaK11BI	GGWCC	1 cut(s)	811
XapI	RAATTY	2 cut(s)	208, 1231
XceI	RCATGY	4 cut(s)	382, 1444, 1494, 1973
XhoI	CTCGAG	1 cut(s)	984
XmiI	GTMKAC	1 cut(s)	1832
XmnI	GAANNNNTTC	2 cut(s)	953, 1773
Zsp2I	ATGCAT	1 cut(s)	896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.