Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002312

Physical Location & Seq

Genomic Coordinates Reverse (-)

44122238 .. 44125518

Gene Structure 3281 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG357100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTTTATGGTTGATATTGCTGGTGTTAGGGTCCTCTACACTGGAGATTATTCACGTGAAGAAGACCGACACCTCCGTGCTGCTGAGACCCCACAGTTCTCCCCCGATATATGCATTATTGAGTCCACATATGGTGTCCAGCACCATCAACCTCGAAACATCCGCGAGAAGCGATTCACTGAAGCTATACACACTGCCCTCTCTCGAGGCGGTCGTGTCTTAATTCCTGCATTTGCACTTGGTCGTGCCCAAGAACTTCTCCTGATCCTTGATGAGTATTGGGCAAATCATCCAGAGCTCCAAAATATACCTATATATTATGCTTCCCCACTGGCAAAAAGGTGTTTGTCTGTTTATGAGACATACACCCTTTCAATGAATGATAGGATCCGCAATGCGAAATCAAATCCCTTCATCTTCAAGTACATATCACCACTAAAGAGCATTGAGAATTTCAAAGATGTAGGCCCATCGGTCGTGATGGCAAGCCCTGGTGGTCTTCAAAGCGGGCTGTCAAGGCAGCTATTTGATATGTGGTGCTCTGATAAGAGAAATGCATGTGTGATTCCAGGTTATGTGGTTGAGGGGACACTTGCTAAGACAATCATCAATGAACCGAAAGAGGTTACCCTTATGAATGGGTTAGCCGCTCCGCTCAACATGTCGGTCCATTACATTTCATTCTCTGCTCATGCAGACTCTGTTCAGACAAGTGCATTTTTGGAGGAGCTGAGGCCTCCTAACATAATCCTTGTTCATGGAGAAGCTCATGAGATGGGAAGGCTGAAAGAGAAGCTCATGACTCAGTTTCGTGATCGCAACACAAAAATCCTCACACCAAAGAATTGTCAGTCTGTTGAAATGTATTTTAACTCACAAAAAATGGCTAAAGCTATTGGAAGGCTTGCTGAGAGGACCCCGGAAGTTGGTGAAAAAGTCAGCGGTTTACTGGTAAAAAAAGGTTTCAGTTATCAGATAATGGCTTCTGAAGATCTTCATGTTTTTTCACAGCTGTCCACAGCAAATGTCACTCAACGTATTACTATCCCTTATACTACTGGCTTCATGGTGATAAAACATCGGCTGAGGCAAATATATGAAAGTGTAGAATCTTCTGTGGATGAGGAATCTGGAGTGCCGACGTTGCAAGTGCATGATCGAGTGACTGTGAGGCAGGATACAGATAAACATGTTTCACTGCATTGGATGTCAGATCCTATAAGTGACATGGTGTCAGACTCTATCGTAGCTCTAATTTTGAATATCAACAGAGAAGTCCCCAAGGTAGTCATCGAATCGGAGGACATAAAGACAGAGGAAGAGAATGGCAGGAAAACAGAAAAGGTCATTCATGCACTTCTTGTATCACTCTTTGGGGATGTGAAGCCTGGAGAAAATGGGAAGTTGGTGATCAGTGTTGATGGAAATGTGGCACAACTTGACAAACAGAGTGGGGACGTAGAGAGTGAAAATGAAGGCCTCAAGGAAAGAGTAAAGACAGCATTTCGTCGAATCCAAAGTGCAGTGAAGCCAATTTCTCTCTCTGCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016073 GO:0016180 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF73-100_C Lactamase_B Lactamase_B_6 RMMBL

Protein Analysis

517

Amino Acids

58.03

Weight (kDa)

6.59

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-Casp	PF10996	83 - 202	5.7e-29	Beta-Casp domain
RMMBL	PF07521	218 - 270	5.1e-13	Zn-dependent metallo-hydrolase RNA specificity domain
CPSF73-100_C	PF11718	312 - 511	6.7e-52	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61010 AT1G61010 AT1G61010 AT1G61010 AT1G61010
fragaria_vesca	FvH4_4g07000 FvH4_4g07000 FvH4_5g28761 FvH4_5g28770 FvH4_7g26770
malus_domestica	MD08G1237400.v1.1 MD15G1429300.v1.1
prunus_persica	Prupe.1G574800_v2.0.a1 Prupe.1G574800_v2.0.a1 Prupe.1G574900_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006200_v2.0.a1
pyrus_communis	pycom08g20590 pycom08g20600 pycom15g37980 pycom15g37990
rosa_chinensis	RchiOBHm_Chr1g0363271 RchiOBHm_Chr4g0399131 RchiOBHm_Chr7g0220981
rosa_laevigata	RLG00000002186 RLG00000009298
rosa_multiflora	Rmu_sc0002002.1_g000015 Rmu_sc0002105.1_g000022
rosa_roxburghii	Rroxscaffold_3G00238830 Rroxscaffold_5G00344090
rosa_rugosa	Rorug04G0014100 Rorug07G0199100
rosa_samantha	Rh1DG309200 Rh4BG089900 Rh4DG084500 Rh7AG339000 Rh7BG329800 Rh7CG357100 Rh7DG337800
rosa_wichuraiana	Rw4G007590 Rw7G028840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	650, 655
AccII	CGCG	1 cut(s)	165
AciI	CCGC	7 cut(s)	163, 210, 391, 507, 648, 653, 942
AclWI	GGATC	4 cut(s)	259, 382, 395, 1208
AcsI	RAATTY	1 cut(s)	451
AcuI	CTGAAG	2 cut(s)	201, 1008
AcvI	CACGTG	1 cut(s)	56
AfaI	GTAC	1 cut(s)	425
AfiI	CCNNNNNNNGG	1 cut(s)	926
AflIII	ACRYGT	2 cut(s)	660, 1189
AgsI	TTSAA	6 cut(s)	375, 421, 457, 503, 860, 1261
AhdI	GACNNNNNGTC	1 cut(s)	1231
AjnI	CCWGG	3 cut(s)	490, 568, 1387
AleI	CACNNNNGTG	1 cut(s)	75
AluBI	AGCT	9 cut(s)	185, 298, 523, 730, 767, 796, 893, 1012, 1250
AluI	AGCT	9 cut(s)	185, 298, 523, 730, 767, 796, 893, 1012, 1250
Alw21I	GWGCWC	2 cut(s)	300, 542
Alw26I	GTCTC	2 cut(s)	80, 353
AlwI	GGATC	4 cut(s)	259, 382, 395, 1208
AlwNI	CAGNNNCTG	1 cut(s)	701
Ama87I	CYCGRG	1 cut(s)	204
AoxI	GGCC	3 cut(s)	466, 734, 1477
ApeKI	GCWGC	2 cut(s)	80, 520
ApoI	RAATTY	1 cut(s)	451
Asp700I	GAANNNNTTC	2 cut(s)	173, 993
AspS9I	GGNCC	4 cut(s)	31, 467, 667, 915
AsuC2I	CCSGG	1 cut(s)	920
AsuHPI	GGTGA	4 cut(s)	423, 941, 1081, 1420
AvaI	CYCGRG	1 cut(s)	204
AvaII	GGWCC	3 cut(s)	31, 667, 915
BaeGI	GKGCMC	1 cut(s)	250
BamHI	GGATCC	1 cut(s)	387
BanII	GRGCYC	1 cut(s)	300
BbrPI	CACGTG	1 cut(s)	56
BbsI	GAAGAC	2 cut(s)	69, 491
Bbv12I	GWGCWC	2 cut(s)	300, 542
BbvCI	CCTCAGC	2 cut(s)	731, 1085
BbvI	GCAGC	2 cut(s)	67, 532
BccI	CCATC	5 cut(s)	153, 475, 478, 769, 1415
BciT130I	CCWGG	3 cut(s)	492, 570, 1389
BciVI	GTATCC	1 cut(s)	1171
BclI	TGATCA	1 cut(s)	1410
BcnI	CCSGG	1 cut(s)	920
BcoDI	GTCTC	2 cut(s)	80, 353
BfuI	GTATCC	1 cut(s)	1171
BglII	AGATCT	1 cut(s)	991
BisI	GCNGC	3 cut(s)	81, 521, 648
BlsI	GCNGC	3 cut(s)	82, 522, 649
Bme1390I	CCNGG	4 cut(s)	492, 570, 920, 1389
Bme18I	GGWCC	3 cut(s)	31, 667, 915
BmeRI	GACNNNNNGTC	1 cut(s)	1231
BmeT110I	CYCGRG	1 cut(s)	204
BmgT120I	GGNCC	4 cut(s)	31, 467, 667, 915
BmiI	GGNNCC	3 cut(s)	32, 389, 917
BmrFI	CCNGG	4 cut(s)	492, 570, 920, 1389
BpiI	GAAGAC	2 cut(s)	69, 491
BpmI	CTGGAG	3 cut(s)	63, 1152, 1410
Bpu10I	CCTNAGC	2 cut(s)	731, 1085
BpuEI	CTTGAG	1 cut(s)	1466
BpuMI	CCSGG	1 cut(s)	920
BsaAI	YACGTR	1 cut(s)	56
BsaI	GGTCTC	1 cut(s)	80
BsaJI	CCNNGG	3 cut(s)	490, 918, 1281
Bsc4I	CCNNNNNNNGG	1 cut(s)	926
Bse1I	ACTGG	4 cut(s)	46, 336, 954, 1063
Bse3DI	GCAATG	1 cut(s)	400
BseBI	CCWGG	3 cut(s)	492, 570, 1389
BseDI	CCNNGG	3 cut(s)	490, 918, 1281
BseGI	GGATG	5 cut(s)	159, 289, 1126, 1212, 1384
BseLI	CCNNNNNNNGG	1 cut(s)	926
BseMI	GCAATG	1 cut(s)	400
BseMII	CTCAG	5 cut(s)	75, 722, 818, 900, 1076
BseNI	ACTGG	4 cut(s)	46, 336, 954, 1063
BseRI	GAGGAG	1 cut(s)	740
BseSI	GKGCMC	1 cut(s)	250
BseXI	GCAGC	2 cut(s)	67, 532
BsgI	GTGCAG	1 cut(s)	1542
Bsh1236I	CGCG	1 cut(s)	165
Bsh1285I	CGRYCG	2 cut(s)	214, 477
BshFI	GGCC	3 cut(s)	468, 736, 1479
BsiEI	CGRYCG	2 cut(s)	214, 477
BsiHKAI	GWGCWC	2 cut(s)	300, 542
BsiHKCI	CYCGRG	1 cut(s)	204
BsiSI	CCGG	1 cut(s)	920
BslFI	GGGAC	3 cut(s)	601, 1262, 1469
BslI	CCNNNNNNNGG	1 cut(s)	926
BsmAI	GTCTC	2 cut(s)	80, 353
BsmFI	GGGAC	3 cut(s)	601, 1262, 1469
BsnI	GGCC	3 cut(s)	468, 736, 1479
Bso31I	GGTCTC	1 cut(s)	80
BsoBI	CYCGRG	1 cut(s)	204
Bsp1286I	GDGCHC	3 cut(s)	250, 300, 542
Bsp143I	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
BspACI	CCGC	7 cut(s)	163, 210, 391, 507, 648, 653, 942
BspANI	GGCC	3 cut(s)	468, 736, 1479
BspCNI	CTCAG	5 cut(s)	76, 723, 817, 901, 1077
BspFNI	CGCG	1 cut(s)	165
BspHI	TCATGA	2 cut(s)	769, 798
BspLI	GGNNCC	3 cut(s)	32, 389, 917
BspPI	GGATC	4 cut(s)	259, 382, 395, 1208
BspTNI	GGTCTC	1 cut(s)	80
BsrBI	CCGCTC	2 cut(s)	650, 655
BsrDI	GCAATG	1 cut(s)	400
BsrI	ACTGG	4 cut(s)	46, 336, 954, 1063
BssECI	CCNNGG	3 cut(s)	490, 918, 1281
BssMI	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
BssT1I	CCWWGG	1 cut(s)	1281
Bst2UI	CCWGG	3 cut(s)	492, 570, 1389
Bst4CI	ACNGT	2 cut(s)	96, 1168
Bst6I	CTCTTC	1 cut(s)	1314
BstBAI	YACGTR	1 cut(s)	56
BstC8I	GCNNGC	3 cut(s)	487, 509, 906
BstDEI	CTNAG	7 cut(s)	84, 597, 731, 804, 909, 1085, 1551
BstEII	GGTNACC	1 cut(s)	625
BstF5I	GGATG	5 cut(s)	159, 289, 1126, 1212, 1384
BstFNI	CGCG	1 cut(s)	165
BstKTI	GATC	7 cut(s)	267, 390, 817, 994, 1159, 1216, 1413
BstMAI	GTCTC	2 cut(s)	80, 353
BstMBI	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
BstMCI	CGRYCG	2 cut(s)	214, 477
BstMWI	GCNNNNNNNGC	2 cut(s)	517, 1144
BstNI	CCWGG	3 cut(s)	492, 570, 1389
BstNSI	RCATGY	3 cut(s)	561, 664, 1193
BstPI	GGTNACC	1 cut(s)	625
BstSCI	CCNGG	4 cut(s)	490, 568, 918, 1387
BstSLI	GKGCMC	1 cut(s)	250
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	2 cut(s)	67, 532
BstV2I	GAAGAC	2 cut(s)	69, 491
BstX2I	RGATCY	3 cut(s)	387, 991, 1213
BstYI	RGATCY	3 cut(s)	387, 991, 1213
BsuI	GTATCC	1 cut(s)	1171
BsuRI	GGCC	3 cut(s)	468, 736, 1479
BtsCI	GGATG	5 cut(s)	159, 289, 1126, 1212, 1384
BtsI	GCAGTG	3 cut(s)	192, 1196, 1530
BtsIMutI	CAGTG	7 cut(s)	39, 177, 192, 329, 1196, 1420, 1530
Cac8I	GCNNGC	3 cut(s)	487, 509, 906
CaiI	CAGNNNCTG	1 cut(s)	701
CciI	TCATGA	2 cut(s)	769, 798
Cfr13I	GGNCC	4 cut(s)	31, 467, 667, 915
Csp6I	GTAC	1 cut(s)	424
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviQI	GTAC	1 cut(s)	424
DdeI	CTNAG	7 cut(s)	84, 597, 731, 804, 909, 1085, 1551
DpnI	GATC	7 cut(s)	266, 389, 816, 993, 1158, 1215, 1412
DpnII	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
DriI	GACNNNNNGTC	1 cut(s)	1231
Eam1104I	CTCTTC	1 cut(s)	1314
Eam1105I	GACNNNNNGTC	1 cut(s)	1231
EarI	CTCTTC	1 cut(s)	1314
Ecl136II	GAGCTC	1 cut(s)	298
Eco130I	CCWWGG	1 cut(s)	1281
Eco147I	AGGCCT	2 cut(s)	736, 1479
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	1 cut(s)	80
Eco47I	GGWCC	3 cut(s)	31, 667, 915
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	2 cut(s)	201, 1008
Eco72I	CACGTG	1 cut(s)	56
Eco88I	CYCGRG	1 cut(s)	204
Eco91I	GGTNACC	1 cut(s)	625
EcoICRI	GAGCTC	1 cut(s)	298
EcoO109I	RGGNCCY	2 cut(s)	31, 915
EcoO65I	GGTNACC	1 cut(s)	625
EcoRII	CCWGG	3 cut(s)	490, 568, 1387
EcoT14I	CCWWGG	1 cut(s)	1281
EcoT22I	ATGCAT	2 cut(s)	116, 559
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	1281
FaqI	GGGAC	3 cut(s)	601, 1262, 1469
FauI	CCCGC	1 cut(s)	500
FauNDI	CATATG	1 cut(s)	130
FbaI	TGATCA	1 cut(s)	1410
Fnu4HI	GCNGC	3 cut(s)	81, 521, 648
FokI	GGATG	5 cut(s)	146, 276, 1133, 1219, 1391
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	3 cut(s)	81, 521, 648
GluI	GCNGC	3 cut(s)	81, 521, 648
GsuI	CTGGAG	3 cut(s)	63, 1152, 1410
HaeIII	GGCC	3 cut(s)	468, 736, 1479
HapII	CCGG	1 cut(s)	920
HpaII	CCGG	1 cut(s)	920
HphI	GGTGA	4 cut(s)	423, 941, 1081, 1420
Hpy166II	GTNNAC	3 cut(s)	126, 947, 1017
Hpy188I	TCNGA	7 cut(s)	544, 708, 975, 988, 1213, 1237, 1300
Hpy188III	TCNNGA	8 cut(s)	204, 262, 293, 478, 770, 799, 812, 1131
Hpy8I	GTNNAC	3 cut(s)	126, 947, 1017
Hpy99I	CGWCG	2 cut(s)	1144, 1512
HpyAV	CCTTC	4 cut(s)	421, 774, 894, 1469
HpyCH4III	ACNGT	2 cut(s)	96, 1168
HpyCH4IV	ACGT	4 cut(s)	55, 1036, 1142, 1458
HpyF10VI	GCNNNNNNNGC	2 cut(s)	517, 1144
HpyF3I	CTNAG	7 cut(s)	84, 597, 731, 804, 909, 1085, 1551
HpySE526I	ACGT	4 cut(s)	55, 1036, 1142, 1458
Ksp22I	TGATCA	1 cut(s)	1410
Kzo9I	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
LmnI	GCTCC	3 cut(s)	303, 655, 727
Lsp1109I	GCAGC	2 cut(s)	67, 532
MaeII	ACGT	4 cut(s)	55, 1036, 1142, 1458
MaeIII	GTNAC	4 cut(s)	625, 1027, 1162, 1223
MalI	GATC	7 cut(s)	266, 389, 816, 993, 1158, 1215, 1412
MbiI	CCGCTC	2 cut(s)	650, 655
MboI	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
MboII	GAAGA	8 cut(s)	71, 74, 409, 491, 986, 1001, 1104, 1331
MflI	RGATCY	3 cut(s)	387, 991, 1213
MhlI	GDGCHC	3 cut(s)	250, 300, 542
MluCI	AATT	5 cut(s)	222, 451, 844, 1254, 1533
MlyI	GAGTC	4 cut(s)	131, 692, 796, 1232
Mph1103I	ATGCAT	2 cut(s)	116, 559
MroXI	GAANNNNTTC	2 cut(s)	173, 993
MseI	TTAA	2 cut(s)	221, 870
MslI	CAYNNNNRTG	1 cut(s)	75
MspA1I	CMGCKG	2 cut(s)	942, 1012
MspI	CCGG	1 cut(s)	920
MspR9I	CCNGG	4 cut(s)	492, 570, 920, 1389
MvaI	CCWGG	3 cut(s)	492, 570, 1389
MvnI	CGCG	1 cut(s)	165
MwoI	GCNNNNNNNGC	2 cut(s)	517, 1144
NciI	CCSGG	1 cut(s)	920
NdeI	CATATG	1 cut(s)	130
NdeII	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
NlaIV	GGNNCC	3 cut(s)	32, 389, 917
NmuCI	GTSAC	3 cut(s)	1027, 1162, 1223
NsiI	ATGCAT	2 cut(s)	116, 559
NspI	RCATGY	3 cut(s)	561, 664, 1193
OliI	CACNNNNGTG	1 cut(s)	75
PaeR7I	CTCGAG	1 cut(s)	204
PagI	TCATGA	2 cut(s)	769, 798
PceI	AGGCCT	2 cut(s)	736, 1479
PciI	ACATGT	2 cut(s)	660, 1189
PcsI	WCGNNNNNNNCGW	1 cut(s)	211
PdmI	GAANNNNTTC	2 cut(s)	173, 993
PfeI	GAWTC	6 cut(s)	174, 565, 1109, 1127, 1295, 1512
PkrI	GCNGC	3 cut(s)	82, 522, 649
PleI	GAGTC	4 cut(s)	130, 692, 796, 1232
PmaCI	CACGTG	1 cut(s)	56
PmlI	CACGTG	1 cut(s)	56
PpsI	GAGTC	4 cut(s)	130, 692, 796, 1232
Ppu21I	YACGTR	1 cut(s)	56
PpuMI	RGGWCCY	2 cut(s)	31, 915
PscI	ACATGT	2 cut(s)	660, 1189
Psp124BI	GAGCTC	1 cut(s)	300
Psp5II	RGGWCCY	2 cut(s)	31, 915
Psp6I	CCWGG	3 cut(s)	490, 568, 1387
PspCI	CACGTG	1 cut(s)	56
PspEI	GGTNACC	1 cut(s)	625
PspGI	CCWGG	3 cut(s)	490, 568, 1387
PspN4I	GGNNCC	3 cut(s)	32, 389, 917
PspPI	GGNCC	4 cut(s)	31, 467, 667, 915
PspPPI	RGGWCCY	2 cut(s)	31, 915
PstNI	CAGNNNCTG	1 cut(s)	701
PsuI	RGATCY	3 cut(s)	387, 991, 1213
PvuII	CAGCTG	1 cut(s)	1012
RsaI	GTAC	1 cut(s)	425
RsaNI	GTAC	1 cut(s)	424
RseI	CAYNNNNRTG	1 cut(s)	75
SacI	GAGCTC	1 cut(s)	300
SaqAI	TTAA	2 cut(s)	221, 870
SatI	GCNGC	3 cut(s)	81, 521, 648
Sau3AI	GATC	7 cut(s)	264, 387, 814, 991, 1156, 1213, 1410
Sau96I	GGNCC	4 cut(s)	31, 467, 667, 915
SchI	GAGTC	4 cut(s)	131, 692, 796, 1232
ScrFI	CCNGG	4 cut(s)	492, 570, 920, 1389
SduI	GDGCHC	3 cut(s)	250, 300, 542
Sfr274I	CTCGAG	1 cut(s)	204
SinI	GGWCC	3 cut(s)	31, 667, 915
SlaI	CTCGAG	1 cut(s)	204
SmiMI	CAYNNNNRTG	1 cut(s)	75
SmlI	CTYRAG	2 cut(s)	204, 1481
SmoI	CTYRAG	2 cut(s)	204, 1481
Sse9I	AATT	5 cut(s)	222, 451, 844, 1254, 1533
SseBI	AGGCCT	2 cut(s)	736, 1479
SsiI	CCGC	7 cut(s)	163, 210, 391, 507, 648, 653, 942
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	2 cut(s)	736, 1479
StyD4I	CCNGG	4 cut(s)	490, 568, 918, 1387
StyI	CCWWGG	1 cut(s)	1281
TaaI	ACNGT	2 cut(s)	96, 1168
TaiI	ACGT	4 cut(s)	58, 1039, 1145, 1461
TaqI	TCGA	5 cut(s)	154, 205, 1159, 1293, 1510
TaqII	GACCGA	3 cut(s)	81, 463, 655
TasI	AATT	5 cut(s)	222, 451, 844, 1254, 1533
TatI	WGTACW	1 cut(s)	423
TauI	GCSGC	1 cut(s)	650
TfiI	GAWTC	6 cut(s)	174, 565, 1109, 1127, 1295, 1512
Tru1I	TTAA	2 cut(s)	221, 870
Tru9I	TTAA	2 cut(s)	221, 870
TscAI	CASTG	7 cut(s)	46, 184, 199, 336, 1203, 1420, 1530
TseFI	GTSAC	3 cut(s)	1027, 1162, 1223
TseI	GCWGC	2 cut(s)	80, 520
Tsp45I	GTSAC	3 cut(s)	1027, 1162, 1223
TspGWI	ACGGA	1 cut(s)	65
TspRI	CASTG	7 cut(s)	46, 184, 199, 336, 1203, 1420, 1530
VpaK11BI	GGWCC	3 cut(s)	31, 667, 915
XapI	RAATTY	1 cut(s)	451
XceI	RCATGY	3 cut(s)	561, 664, 1193
XhoI	CTCGAG	1 cut(s)	204
XmnI	GAANNNNTTC	2 cut(s)	173, 993
Zsp2I	ATGCAT	2 cut(s)	116, 559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.