Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002312

Physical Location & Seq

Genomic Coordinates Reverse (-)

6334282 .. 6339277

Gene Structure 4996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g07000.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGCTTCTTCGACGGCGGGAGTAAAGCGGCGCGAGACGTCGTCGTCTTCGGCGGCAAAAGCGGAAGACAAGCTGGTCGTGACTCCATTAGGCGCCGGAAACGAAGTGGGTCGGTCTTGCGTTCACATGACCTACAAGGGCAAAACCGTCCTTTTTGATTGCGGAATCCACCCGGCTTTCTCCGGCATGGCTGCTTTGCCCTACTTCGATGAGATTGATCCTTCCACTATCGATGTCCTTCTCGTTACCCATTTTCACTTGGATCATGCTGCATCCCTCCCTTACTTCCTTGAGAAGACCACTTTCAAGGGCCGAGTCTTCATGACATATGCAACGAAGGCTATCTACCATTTGCTTTTGAAAGATTATGTGAAAGTCAGCAAATTTTCAGTTGAAGATATGTTGTTCGACGAGAAGGACATAAATGCTTCTATGGATAAAATTGAGGTTATTGATTTCCACCAAACAGTAGAAGTGGAGGGCATCCGGTTTTGGTGCTACACTGCAGGTCATGTCCTTGGTGCTGCTATGTTTATGGTTGATATTGCTGGTGTTCGGGTCCTCTACACTGGAGATTATTCACGTGAAGAAGACCGACACCTCCGTGCTGCTGAGATCCCACAGTTCTCCCCTGATATATGCATCATTGAGTCCACATATGGTGTCCAGCACCATCAACCTCGAACCATCCGAGAGAAGCGATTCACAGAAGCTATACACACAGCCATCTCTCGAGGGGGTCGTGTCTTGATTCCTGCATTTGCTCTTGGTCGTGCCCAAGAGCTGCTCCTGATTCTTGATGAGTATTGGGCAAACCATCCAGAGCTCCATAATATTCCTATATACTATGCTTCCCCACTGGCAAAAAAATGTTTGTCTGTTTATGAGACGTACACCCTCTCAATGAACGATAGGATCCAGAATGCCAAATCAAATCCCTTCATCTTCAAGCACATATCACCACTAAAGAGCATTGAGAATTTCAAAGATGTTGGTCCCTCAGTGGTGATGGCAAGCCCTGGTACTCTTCAAAGCGGGCTGTCAAGGCAGCTATTTGATATGTGGTGCTCTGATAAGAGAAATGCATGTGTGATTCCAGGTTATGTGATTGAGGGGACACTTGCTAAGACAATCATCAATGAACCGAAAGAGGTTACTCTTATGAATGGGCTTGCCGCTCCTCTCAACATGTCCATCCATTACATTTCATTCTCTGCTCATGCAGACTCTGTTCAGACAAGTGCATTTTTGGAGGAGCTGAGGCCTCCTAACATCATTCTTGTTCATGGAGAATCTCATGAGATGGGAAGGTTGAAAGAGAAGCTAATGACTCAATTTCGTGATCGGAACACAAAGATCCTCACACCAAGGAATTGTCAGTCGGTTGAAATGCACTTCAACTCGCAGAAGATGGCTAAAGCCATTGGAAAAATTGCTGAAAGGACCCCTGAAGTTGGTGAAAAAGTTAGCGGTTTAATGGTTAAGAAAGGCTTCAGTTATCAGATAATGGCCTCTGAAGATCTTCATGTTTTCTCACAGCTGTCCACAGCAAATGTCACTCAGCGCATTACTATCCCGTACGCTACTAGCTTCATGGTGATAAATCATAGACTGAGGCAAATATATGAGATCGTAGAGCCTTCTGAGGATGCGGAATCTGGAGTGCCAACTTTGAAAGTGCATGATCGAGTCACAGTGAGGCAGGACACAGACAAACATATTTCACTGCATTGGACATCAGATCCGATAAGTGACATGGTGTCGGACTCAATTGTGGCTCTAATCTTGAATATCAACCGGGAAGTCCCCAGGGTTGTCATTGAAGCGGAGGACACAACAGCAGAGGAAGAGAATGGTAGGAGGACAGAAAGGGTCATTCATGCACTTCTTGTATCACTCTTTGGGGATGTGAAGCCTGGAGAAAATGGGAAGTTGGTGATCAGTGTTGATGGAAATGTGGCACAGCTTGATAAACAAAGTGGCGACGTTGAGAGTGAAAATGAAGGCCTCAAGGAAAGAGTGAAGACAGCATTTCGTCGAATCCAAAGTGCGGTCAGGCCAATTCCTCTCTTTGCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016073 GO:0016180 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF73-100_C Lactamase_B Lactamase_B_6 RMMBL

Protein Analysis

694

Amino Acids

77.57

Weight (kDa)

6.31

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B_6	PF16661	13 - 100	9.2e-10	Metallo-beta-lactamase superfamily domain
Beta-Casp	PF10996	152 - 271	6.1e-29	Beta-Casp domain
RMMBL	PF07521	287 - 339	7e-13	Zn-dependent metallo-hydrolase RNA specificity domain
CPSF73-100_C	PF11718	381 - 580	7.3e-50	Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61010 AT1G61010 AT1G61010 AT1G61010 AT1G61010
fragaria_vesca	FvH4_4g07000 FvH4_4g07000 FvH4_5g28761 FvH4_5g28770 FvH4_7g26770
malus_domestica	MD08G1237400.v1.1 MD15G1429300.v1.1
prunus_persica	Prupe.1G574800_v2.0.a1 Prupe.1G574800_v2.0.a1 Prupe.1G574900_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006200_v2.0.a1
pyrus_communis	pycom08g20590 pycom08g20600 pycom15g37980 pycom15g37990
rosa_chinensis	RchiOBHm_Chr1g0363271 RchiOBHm_Chr4g0399131 RchiOBHm_Chr7g0220981
rosa_laevigata	RLG00000002186 RLG00000009298
rosa_multiflora	Rmu_sc0002002.1_g000015 Rmu_sc0002105.1_g000022
rosa_roxburghii	Rroxscaffold_3G00238830 Rroxscaffold_5G00344090
rosa_rugosa	Rorug04G0014100 Rorug07G0199100
rosa_samantha	Rh1DG309200 Rh4BG089900 Rh4DG084500 Rh7AG339000 Rh7BG329800 Rh7CG357100 Rh7DG337800
rosa_wichuraiana	Rw4G007590 Rw7G028840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	43, 74
AatII	GACGTC	1 cut(s)	41
Acc36I	ACCTGC	1 cut(s)	497
AccB1I	GGYRCC	1 cut(s)	92
AccBSI	CCGCTC	1 cut(s)	1178
AccII	CGCG	1 cut(s)	33
AclWI	GGATC	7 cut(s)	212, 270, 610, 910, 923, 1351, 1736
AcsI	RAATTY	2 cut(s)	383, 979
AcuI	CTGAAG	3 cut(s)	1470, 1477, 1536
AcvI	CACGTG	1 cut(s)	584
AcyI	GRCGYC	2 cut(s)	38, 93
AfaI	GTAC	3 cut(s)	893, 1024, 1580
AfiI	CCNNNNNNNGG	2 cut(s)	1454, 2050
AflIII	ACRYGT	1 cut(s)	1188
AhdI	GACNNNNNGTC	1 cut(s)	1759
AjnI	CCWGG	4 cut(s)	1018, 1096, 1808, 1915
AleI	CACNNNNGTG	1 cut(s)	603
Alw21I	GWGCWC	2 cut(s)	828, 1070
Alw26I	GTCTC	2 cut(s)	29, 881
AlwI	GGATC	7 cut(s)	212, 270, 610, 910, 923, 1351, 1736
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	1 cut(s)	732
AoxI	GGCC	5 cut(s)	310, 1262, 1509, 2005, 2057
ApeKI	GCWGC	6 cut(s)	191, 269, 524, 608, 784, 1048
ApoI	RAATTY	2 cut(s)	383, 979
Asp700I	GAANNNNTTC	3 cut(s)	701, 1490, 1521
AspLEI	GCGC	3 cut(s)	33, 95, 1566
AspS9I	GGNCC	4 cut(s)	310, 559, 995, 1443
AsuC2I	CCSGG	2 cut(s)	173, 1799
AsuHPI	GGTGA	5 cut(s)	951, 1018, 1469, 1609, 1948
AvaI	CYCGRG	1 cut(s)	732
AvaII	GGWCC	3 cut(s)	559, 995, 1443
BaeGI	GKGCMC	1 cut(s)	778
BamHI	GGATCC	1 cut(s)	915
BanI	GGYRCC	1 cut(s)	92
BanII	GRGCYC	1 cut(s)	828
BarI	GAAGNNNNNNTAC	2 cut(s)	329, 361
BbrPI	CACGTG	1 cut(s)	584
BbsI	GAAGAC	6 cut(s)	39, 72, 302, 310, 597, 2030
Bbv12I	GWGCWC	2 cut(s)	828, 1070
BbvCI	CCTCAGC	1 cut(s)	1259
BbvI	GCAGC	6 cut(s)	178, 256, 511, 595, 771, 1060
BccI	CCATC	9 cut(s)	681, 695, 734, 825, 1003, 1202, 1297, 1405, 1943
BceAI	ACGGC	1 cut(s)	30
BciT130I	CCWGG	4 cut(s)	1020, 1098, 1810, 1917
BclI	TGATCA	1 cut(s)	1938
BcnI	CCSGG	2 cut(s)	173, 1799
BcoDI	GTCTC	2 cut(s)	29, 881
BfaI	CTAG	1 cut(s)	1587
BfmI	CTRYAG	1 cut(s)	504
BfoI	RGCGCY	1 cut(s)	96
BfuAI	ACCTGC	1 cut(s)	497
BglII	AGATCT	1 cut(s)	1519
BisI	GCNGC	9 cut(s)	29, 54, 192, 270, 525, 609, 785, 1049, 1176
BlsI	GCNGC	9 cut(s)	30, 55, 193, 271, 526, 610, 786, 1050, 1177
Bme1390I	CCNGG	6 cut(s)	173, 1020, 1098, 1799, 1810, 1917
Bme18I	GGWCC	3 cut(s)	559, 995, 1443
BmeRI	GACNNNNNGTC	1 cut(s)	1759
BmeT110I	CYCGRG	1 cut(s)	732
BmgT120I	GGNCC	4 cut(s)	310, 559, 995, 1443
BmiI	GGNNCC	5 cut(s)	94, 560, 917, 997, 1445
BmrFI	CCNGG	6 cut(s)	173, 1020, 1098, 1799, 1810, 1917
BmsI	GCATC	4 cut(s)	281, 492, 651, 1639
BpiI	GAAGAC	6 cut(s)	39, 72, 302, 310, 597, 2030
BpmI	CTGGAG	3 cut(s)	591, 1680, 1938
Bpu10I	CCTNAGC	1 cut(s)	1259
BpuEI	CTTGAG	2 cut(s)	311, 1994
BpuMI	CCSGG	2 cut(s)	173, 1799
Bsa29I	ATCGAT	1 cut(s)	231
BsaAI	YACGTR	1 cut(s)	584
BsaHI	GRCGYC	2 cut(s)	38, 93
BsaJI	CCNNGG	5 cut(s)	517, 1018, 1367, 1808, 1809
BsaWI	WCCGGW	1 cut(s)	486
Bsc4I	CCNNNNNNNGG	2 cut(s)	1454, 2050
Bse1I	ACTGG	2 cut(s)	574, 864
BseBI	CCWGG	4 cut(s)	1020, 1098, 1810, 1917
BseCI	ATCGAT	1 cut(s)	231
BseDI	CCNNGG	5 cut(s)	517, 1018, 1367, 1808, 1809
BseGI	GGATG	7 cut(s)	272, 483, 687, 817, 1194, 1654, 1912
BseLI	CCNNNNNNNGG	2 cut(s)	1454, 2050
BseMII	CTCAG	6 cut(s)	603, 1014, 1250, 1574, 1604, 1635
BseNI	ACTGG	2 cut(s)	574, 864
BseRI	GAGGAG	2 cut(s)	1170, 1268
BseSI	GKGCMC	1 cut(s)	778
BseXI	GCAGC	6 cut(s)	178, 256, 511, 595, 771, 1060
Bsh1236I	CGCG	1 cut(s)	33
BshFI	GGCC	5 cut(s)	312, 1264, 1511, 2007, 2059
BshNI	GGYRCC	1 cut(s)	92
BshVI	ATCGAT	1 cut(s)	231
BsiHKAI	GWGCWC	2 cut(s)	828, 1070
BsiHKCI	CYCGRG	1 cut(s)	732
BsiSI	CCGG	5 cut(s)	96, 173, 183, 487, 1798
BsiWI	CGTACG	1 cut(s)	1578
BslFI	GGGAC	3 cut(s)	981, 1129, 1790
BslI	CCNNNNNNNGG	2 cut(s)	1454, 2050
BsmAI	GTCTC	2 cut(s)	29, 881
BsmBI	CGTCTC	2 cut(s)	29, 881
BsmFI	GGGAC	3 cut(s)	981, 1129, 1790
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	5 cut(s)	312, 1264, 1511, 2007, 2059
BsoBI	CYCGRG	1 cut(s)	732
Bsp1286I	GDGCHC	3 cut(s)	778, 828, 1070
BspANI	GGCC	5 cut(s)	312, 1264, 1511, 2007, 2059
BspCNI	CTCAG	6 cut(s)	604, 1013, 1251, 1573, 1605, 1636
BspDI	ATCGAT	1 cut(s)	231
BspFNI	CGCG	1 cut(s)	33
BspHI	TCATGA	2 cut(s)	321, 1297
BspLI	GGNNCC	5 cut(s)	94, 560, 917, 997, 1445
BspMAI	CTGCAG	1 cut(s)	508
BspMI	ACCTGC	1 cut(s)	497
BspPI	GGATC	7 cut(s)	212, 270, 610, 910, 923, 1351, 1736
BspT107I	GGYRCC	1 cut(s)	92
BsrBI	CCGCTC	1 cut(s)	1178
BsrI	ACTGG	2 cut(s)	574, 864
BssECI	CCNNGG	5 cut(s)	517, 1018, 1367, 1808, 1809
BssNI	GRCGYC	2 cut(s)	38, 93
BssT1I	CCWWGG	2 cut(s)	517, 1367
Bst2UI	CCWGG	4 cut(s)	1020, 1098, 1810, 1917
Bst4CI	ACNGT	4 cut(s)	148, 469, 624, 1696
Bst6I	CTCTTC	2 cut(s)	1032, 1842
BstACI	GRCGYC	2 cut(s)	38, 93
BstBAI	YACGTR	1 cut(s)	584
BstC8I	GCNNGC	3 cut(s)	1015, 1037, 1173
BstDEI	CTNAG	8 cut(s)	612, 1000, 1125, 1259, 1560, 1613, 1644, 2079
BstF5I	GGATG	7 cut(s)	272, 483, 687, 817, 1194, 1654, 1912
BstFNI	CGCG	1 cut(s)	33
BstH2I	RGCGCY	1 cut(s)	96
BstHHI	GCGC	3 cut(s)	33, 95, 1566
BstMAI	GTCTC	2 cut(s)	29, 881
BstMWI	GCNNNNNNNGC	3 cut(s)	59, 338, 1045
BstNI	CCWGG	4 cut(s)	1020, 1098, 1810, 1917
BstNSI	RCATGY	2 cut(s)	1089, 1192
BstSCI	CCNGG	6 cut(s)	171, 1018, 1096, 1797, 1808, 1915
BstSFI	CTRYAG	1 cut(s)	504
BstSLI	GKGCMC	1 cut(s)	778
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	6 cut(s)	178, 256, 511, 595, 771, 1060
BstV2I	GAAGAC	6 cut(s)	39, 72, 302, 310, 597, 2030
BstX2I	RGATCY	5 cut(s)	615, 915, 1356, 1519, 1741
BstYI	RGATCY	5 cut(s)	615, 915, 1356, 1519, 1741
Bsu15I	ATCGAT	1 cut(s)	231
BsuRI	GGCC	5 cut(s)	312, 1264, 1511, 2007, 2059
BsuTUI	ATCGAT	1 cut(s)	231
BtsCI	GGATG	7 cut(s)	272, 483, 687, 817, 1194, 1654, 1912
BtsI	GCAGTG	2 cut(s)	501, 1724
BtsIMutI	CAGTG	7 cut(s)	501, 567, 857, 1008, 1701, 1724, 1948
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	3 cut(s)	1015, 1037, 1173
CaiI	CAGNNNCTG	1 cut(s)	1229
CciI	TCATGA	2 cut(s)	321, 1297
CfoI	GCGC	3 cut(s)	33, 95, 1566
Cfr13I	GGNCC	4 cut(s)	310, 559, 995, 1443
ClaI	ATCGAT	1 cut(s)	231
Csp6I	GTAC	3 cut(s)	892, 1023, 1579
CviQI	GTAC	3 cut(s)	892, 1023, 1579
DdeI	CTNAG	8 cut(s)	612, 1000, 1125, 1259, 1560, 1613, 1644, 2079
DinI	GGCGCC	1 cut(s)	94
DrdI	GACNNNNNNGTC	2 cut(s)	43, 74
DriI	GACNNNNNGTC	1 cut(s)	1759
DseDI	GACNNNNNNGTC	2 cut(s)	43, 74
Eam1104I	CTCTTC	2 cut(s)	1032, 1842
Eam1105I	GACNNNNNGTC	1 cut(s)	1759
EarI	CTCTTC	2 cut(s)	1032, 1842
Ecl136II	GAGCTC	1 cut(s)	826
Eco130I	CCWWGG	2 cut(s)	517, 1367
Eco147I	AGGCCT	2 cut(s)	1264, 2007
Eco24I	GRGCYC	1 cut(s)	828
Eco47I	GGWCC	3 cut(s)	559, 995, 1443
Eco53kI	GAGCTC	1 cut(s)	826
Eco57I	CTGAAG	3 cut(s)	1470, 1477, 1536
Eco72I	CACGTG	1 cut(s)	584
Eco88I	CYCGRG	1 cut(s)	732
EcoICRI	GAGCTC	1 cut(s)	826
EcoO109I	RGGNCCY	2 cut(s)	559, 1443
EcoRII	CCWGG	4 cut(s)	1018, 1096, 1808, 1915
EcoT14I	CCWWGG	2 cut(s)	517, 1367
EcoT22I	ATGCAT	2 cut(s)	644, 1087
EcoT38I	GRGCYC	1 cut(s)	828
EgeI	GGCGCC	1 cut(s)	94
EheI	GGCGCC	1 cut(s)	94
ErhI	CCWWGG	2 cut(s)	517, 1367
Esp3I	CGTCTC	2 cut(s)	29, 881
FalI	AAGNNNNNCTT	2 cut(s)	1475, 1507
FaqI	GGGAC	3 cut(s)	981, 1129, 1790
FauI	CCCGC	2 cut(s)	10, 1028
FauNDI	CATATG	2 cut(s)	328, 658
FbaI	TGATCA	1 cut(s)	1938
Fnu4HI	GCNGC	9 cut(s)	29, 54, 192, 270, 525, 609, 785, 1049, 1176
FokI	GGATG	7 cut(s)	259, 470, 674, 804, 1181, 1661, 1919
FriOI	GRGCYC	1 cut(s)	828
Fsp4HI	GCNGC	9 cut(s)	29, 54, 192, 270, 525, 609, 785, 1049, 1176
FspBI	CTAG	1 cut(s)	1587
GlaI	GCGC	3 cut(s)	32, 94, 1565
GluI	GCNGC	9 cut(s)	29, 54, 192, 270, 525, 609, 785, 1049, 1176
GsuI	CTGGAG	3 cut(s)	591, 1680, 1938
HaeII	RGCGCY	1 cut(s)	96
HaeIII	GGCC	5 cut(s)	312, 1264, 1511, 2007, 2059
HapII	CCGG	5 cut(s)	96, 173, 183, 487, 1798
HhaI	GCGC	3 cut(s)	33, 95, 1566
Hin1I	GRCGYC	2 cut(s)	38, 93
Hin6I	GCGC	3 cut(s)	31, 93, 1564
HinP1I	GCGC	3 cut(s)	31, 93, 1564
HpaII	CCGG	5 cut(s)	96, 173, 183, 487, 1798
HphI	GGTGA	5 cut(s)	951, 1018, 1469, 1609, 1948
Hpy166II	GTNNAC	4 cut(s)	124, 654, 894, 1545
Hpy8I	GTNNAC	4 cut(s)	124, 654, 894, 1545
Hpy99I	CGWCG	6 cut(s)	16, 43, 46, 413, 1988, 2040
HpyAV	CCTTC	8 cut(s)	231, 248, 331, 409, 949, 1302, 1650, 1997
HpyCH4III	ACNGT	4 cut(s)	148, 469, 624, 1696
HpyCH4IV	ACGT	4 cut(s)	38, 583, 890, 1986
HpyF10VI	GCNNNNNNNGC	3 cut(s)	59, 338, 1045
HpyF3I	CTNAG	8 cut(s)	612, 1000, 1125, 1259, 1560, 1613, 1644, 2079
HpySE526I	ACGT	4 cut(s)	38, 583, 890, 1986
Hsp92I	GRCGYC	2 cut(s)	38, 93
HspAI	GCGC	3 cut(s)	31, 93, 1564
KasI	GGCGCC	1 cut(s)	92
Ksp22I	TGATCA	1 cut(s)	1938
LmnI	GCTCC	4 cut(s)	792, 831, 1183, 1255
Lsp1109I	GCAGC	6 cut(s)	178, 256, 511, 595, 771, 1060
LweI	GCATC	4 cut(s)	281, 492, 651, 1639
MaeI	CTAG	1 cut(s)	1587
MaeII	ACGT	4 cut(s)	38, 583, 890, 1986
MaeIII	GTNAC	6 cut(s)	79, 244, 1153, 1555, 1690, 1751
MbiI	CCGCTC	1 cut(s)	1178
MfeI	CAATTG	1 cut(s)	1770
MflI	RGATCY	5 cut(s)	615, 915, 1356, 1519, 1741
MhlI	GDGCHC	3 cut(s)	778, 828, 1070
MluCI	AATT	8 cut(s)	383, 441, 979, 1334, 1372, 1431, 1770, 2061
Mly113I	GGCGCC	1 cut(s)	93
MlyI	GAGTC	7 cut(s)	76, 324, 659, 1220, 1324, 1698, 1760
MmeI	TCCRAC	1 cut(s)	1743
Mph1103I	ATGCAT	2 cut(s)	644, 1087
MroXI	GAANNNNTTC	3 cut(s)	701, 1490, 1521
MseI	TTAA	2 cut(s)	1475, 1482
MslI	CAYNNNNRTG	1 cut(s)	603
MspA1I	CMGCKG	1 cut(s)	1540
MspI	CCGG	5 cut(s)	96, 173, 183, 487, 1798
MspR9I	CCNGG	6 cut(s)	173, 1020, 1098, 1799, 1810, 1917
MunI	CAATTG	1 cut(s)	1770
Mva1269I	GAATGC	1 cut(s)	928
MvaI	CCWGG	4 cut(s)	1020, 1098, 1810, 1917
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	3 cut(s)	59, 338, 1045
NarI	GGCGCC	1 cut(s)	93
NciI	CCSGG	2 cut(s)	173, 1799
NdeI	CATATG	2 cut(s)	328, 658
NlaIV	GGNNCC	5 cut(s)	94, 560, 917, 997, 1445
NmeAIII	GCCGAG	1 cut(s)	338
NmuCI	GTSAC	4 cut(s)	79, 1555, 1690, 1751
NsiI	ATGCAT	2 cut(s)	644, 1087
NspI	RCATGY	2 cut(s)	1089, 1192
OliI	CACNNNNGTG	1 cut(s)	603
PaeR7I	CTCGAG	1 cut(s)	732
PagI	TCATGA	2 cut(s)	321, 1297
PasI	CCCWGGG	1 cut(s)	1809
PceI	AGGCCT	2 cut(s)	1264, 2007
PciI	ACATGT	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	2 cut(s)	688, 739
PctI	GAATGC	1 cut(s)	928
PdmI	GAANNNNTTC	3 cut(s)	701, 1490, 1521
PfeI	GAWTC	8 cut(s)	165, 702, 751, 793, 1093, 1292, 1655, 2040
Pfl23II	CGTACG	1 cut(s)	1578
PflFI	GACNNNGTC	1 cut(s)	40
PkrI	GCNGC	9 cut(s)	30, 55, 193, 271, 526, 610, 786, 1050, 1177
PleI	GAGTC	7 cut(s)	76, 323, 658, 1220, 1324, 1697, 1760
PluTI	GGCGCC	1 cut(s)	96
PmaCI	CACGTG	1 cut(s)	584
PmlI	CACGTG	1 cut(s)	584
PpsI	GAGTC	7 cut(s)	76, 323, 658, 1220, 1324, 1697, 1760
Ppu21I	YACGTR	1 cut(s)	584
PpuMI	RGGWCCY	2 cut(s)	559, 1443
PscI	ACATGT	1 cut(s)	1188
Psp124BI	GAGCTC	1 cut(s)	828
Psp5II	RGGWCCY	2 cut(s)	559, 1443
Psp6I	CCWGG	4 cut(s)	1018, 1096, 1808, 1915
PspCI	CACGTG	1 cut(s)	584
PspGI	CCWGG	4 cut(s)	1018, 1096, 1808, 1915
PspLI	CGTACG	1 cut(s)	1578
PspN4I	GGNNCC	5 cut(s)	94, 560, 917, 997, 1445
PspPI	GGNCC	4 cut(s)	310, 559, 995, 1443
PspPPI	RGGWCCY	2 cut(s)	559, 1443
PstI	CTGCAG	1 cut(s)	508
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	5 cut(s)	615, 915, 1356, 1519, 1741
PsyI	GACNNNGTC	1 cut(s)	40
PvuII	CAGCTG	1 cut(s)	1540
RsaI	GTAC	3 cut(s)	893, 1024, 1580
RsaNI	GTAC	3 cut(s)	892, 1023, 1579
RseI	CAYNNNNRTG	1 cut(s)	603
SacI	GAGCTC	1 cut(s)	828
SaqAI	TTAA	2 cut(s)	1475, 1482
SatI	GCNGC	9 cut(s)	29, 54, 192, 270, 525, 609, 785, 1049, 1176
Sau96I	GGNCC	4 cut(s)	310, 559, 995, 1443
SchI	GAGTC	7 cut(s)	76, 324, 659, 1220, 1324, 1698, 1760
ScrFI	CCNGG	6 cut(s)	173, 1020, 1098, 1799, 1810, 1917
SduI	GDGCHC	3 cut(s)	778, 828, 1070
SfaNI	GCATC	4 cut(s)	281, 492, 651, 1639
SfcI	CTRYAG	1 cut(s)	504
SfoI	GGCGCC	1 cut(s)	94
Sfr274I	CTCGAG	1 cut(s)	732
SinI	GGWCC	3 cut(s)	559, 995, 1443
SlaI	CTCGAG	1 cut(s)	732
SmiMI	CAYNNNNRTG	1 cut(s)	603
SmlI	CTYRAG	3 cut(s)	290, 732, 2009
SmoI	CTYRAG	3 cut(s)	290, 732, 2009
Sse9I	AATT	8 cut(s)	383, 441, 979, 1334, 1372, 1431, 1770, 2061
SseBI	AGGCCT	2 cut(s)	1264, 2007
SspDI	GGCGCC	1 cut(s)	92
SspI	AATATT	1 cut(s)	835
SspMI	CTAG	1 cut(s)	1587
SstI	GAGCTC	1 cut(s)	828
StuI	AGGCCT	2 cut(s)	1264, 2007
StyD4I	CCNGG	6 cut(s)	171, 1018, 1096, 1797, 1808, 1915
StyI	CCWWGG	2 cut(s)	517, 1367
TaaI	ACNGT	4 cut(s)	148, 469, 624, 1696
TaiI	ACGT	4 cut(s)	41, 586, 893, 1989
TaqI	TCGA	8 cut(s)	11, 207, 231, 408, 682, 733, 1687, 2038
TaqII	GACCGA	2 cut(s)	102, 609
TasI	AATT	8 cut(s)	383, 441, 979, 1334, 1372, 1431, 1770, 2061
TauI	GCSGC	3 cut(s)	31, 56, 1178
TfiI	GAWTC	8 cut(s)	165, 702, 751, 793, 1093, 1292, 1655, 2040
Tru1I	TTAA	2 cut(s)	1475, 1482
Tru9I	TTAA	2 cut(s)	1475, 1482
TscAI	CASTG	7 cut(s)	508, 574, 864, 1008, 1701, 1731, 1948
TseFI	GTSAC	4 cut(s)	79, 1555, 1690, 1751
TseI	GCWGC	6 cut(s)	191, 269, 524, 608, 784, 1048
Tsp45I	GTSAC	4 cut(s)	79, 1555, 1690, 1751
TspGWI	ACGGA	1 cut(s)	593
TspRI	CASTG	7 cut(s)	508, 574, 864, 1008, 1701, 1731, 1948
Tth111I	GACNNNGTC	1 cut(s)	40
VpaK11BI	GGWCC	3 cut(s)	559, 995, 1443
XapI	RAATTY	2 cut(s)	383, 979
XceI	RCATGY	2 cut(s)	1089, 1192
XhoI	CTCGAG	1 cut(s)	732
XmnI	GAANNNNTTC	3 cut(s)	701, 1490, 1521
XspI	CTAG	1 cut(s)	1587
ZraI	GACGTC	1 cut(s)	39
Zsp2I	ATGCAT	2 cut(s)	644, 1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.