Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002105.1

Orthogroup ID

OG0002312

Physical Location & Seq

Genomic Coordinates Forward (+)

84086 .. 86994

Gene Structure 2909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002105.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

atgggttctacagggggagtaaagaggcgcgaggcatcatcgtcttcggcggcaaaagaggaagataagctgattgtgactccgttaggagccggcaatgaagtgggtcgctcttgcgtttacatgtcctacaagggcaaaactgtcttgtttgattgcggcatccatcccgcttactccggcatggctgctctcccctactttgatgagattgatccttccactattgatgtccttctcattacccattttcacttggatcatgctgcatccctgccttacttccttgagaagaccacattcaaaggccgagtctttatgacctatgcaaccaaggctatctacaagttgcttttgacagattatgtgaaagtcagcaaagtttcagttgaagatatgttgttcgatgagcaggacataaatgcttctatggataaaattgaggttattgatttccaccaaacagtagaagttgagggcattcggttctggtgctacactgcaggtcatgtccttggtgctgctatgtttatggttgatattgctggtgttagggtcctctacactggagattattcacgtgaagaagaccgacacctccgtgctgctgagaccccacagttctcccccgatatatgcattattgagtccacatatggtgtccagcaccatcaacctcgaaacatccgtgagaagcgattcactgaagctatacacactgccctctctcgaggcggtcgtgtcttaattcctgcatttgcacttggccgtgcccaagaacttctcctgatccttgatgagtattgggcaaatcatccagagctccaaaatatacctatatattatgcttccccactggcaaaaagatgtttgtctgtttatgagacatacaccctttcaatgaatgataggatccgcaatgcaaagtcaaatcccttcatcttcaagtacatatcaccactaaagagcattgagaatttcaaagatgtaggcccatcggtcgtgatggcaagccctggtggtcttcaaagcgggctgtcaaggcagctatttgatatgtggtgctctgataagagaaatgcatgtgtgattccgggttatgtggttgaggggacacttgctaagacaatcatcaatgaaccgaaagaggttacccttatgaatgggttagccgctccgctcaacatgtcggtccattacatttcattctctgctcatgcagactctgttcagacaagtgcatttttggaggagctgaggcctcctaacataatccttgttcatggagaagctcatgagatgggaaggctgaaagagaagctcatgactcagtttcgtgatcgcaacacaaaaatcctcacaccaaagaattgtcagtctgttgaaatgtattttaactcacaaaaaatggctaaagctattggaaggcttgctgagaggaccccggaagttggtgaaaaagtcagcggtttactggtaaaaaaaggtttcagttatcagataatggcttctgaagatcttcatgttttttcgcagctgtccacagcaaatgtcactcaacgtattaccatcccttatactactggcttcatggtgataaaacatcggctcaggcaaatatatgaaagtgtagaatcttctgtggatgaggaatctggagtgccgacgttgcaagtgcatgatcgagtgactgtgaggcaggatacagataaacatgtttcactgctttggatgtcagatcctataagtgacatggtgtcagactctatcgtagctctaattttgaatatcaacagagaagtcccgaaggtagtcatcgaatcggaggacataaagacagaggaagagaatggcaggaaaacagaaaaggtcattcatgcacttcttgtatcactctttggggatgtgaagcctggagaaaatgggaagttggtgatcagtgttgatggaaatgtggcacaacttgataaacagagtggggacgtagagagtgaaaatgaaggcctcaaggaaagagtaaagacagcatttcgtcgaatccaaagtgcagtgaagccaatttctctctctgcatcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016073 GO:0016180 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Beta-Casp CPSF73-100_C Lactamase_B Lactamase_B_6 RMMBL

Protein Analysis

692

Amino Acids

77.35

Weight (kDa)

6.16

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61010 AT1G61010 AT1G61010 AT1G61010 AT1G61010
fragaria_vesca	FvH4_4g07000 FvH4_4g07000 FvH4_5g28761 FvH4_5g28770 FvH4_7g26770
malus_domestica	MD08G1237400.v1.1 MD15G1429300.v1.1
prunus_persica	Prupe.1G574800_v2.0.a1 Prupe.1G574800_v2.0.a1 Prupe.1G574900_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006100_v2.0.a1 Prupe.I006200_v2.0.a1
pyrus_communis	pycom08g20590 pycom08g20600 pycom15g37980 pycom15g37990
rosa_chinensis	RchiOBHm_Chr1g0363271 RchiOBHm_Chr4g0399131 RchiOBHm_Chr7g0220981
rosa_laevigata	RLG00000002186 RLG00000009298
rosa_multiflora	Rmu_sc0002002.1_g000015 Rmu_sc0002105.1_g000022
rosa_roxburghii	Rroxscaffold_3G00238830 Rroxscaffold_5G00344090
rosa_rugosa	Rorug04G0014100 Rorug07G0199100
rosa_samantha	Rh1DG309200 Rh4BG089900 Rh4DG084500 Rh7AG339000 Rh7BG329800 Rh7CG357100 Rh7DG337800
rosa_wichuraiana	Rw4G007590 Rw7G028840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	494
AccBSI	CCGCTC	2 cut(s)	1175, 1180
AccII	CGCG	1 cut(s)	30
AciI	CCGC	9 cut(s)	50, 159, 171, 735, 916, 1032, 1173, 1178, 1467
AclWI	GGATC	6 cut(s)	209, 267, 784, 907, 920, 1733
AcoI	YGGCCR	1 cut(s)	766
AcsI	RAATTY	1 cut(s)	976
AcuI	CTGAAG	2 cut(s)	726, 1533
AcvI	CACGTG	1 cut(s)	581
AfaI	GTAC	1 cut(s)	950
AfiI	CCNNNNNNNGG	1 cut(s)	1451
AflIII	ACRYGT	3 cut(s)	123, 1185, 1714
AgsI	TTSAA	8 cut(s)	304, 392, 900, 946, 982, 1028, 1385, 1786
AhdI	GACNNNNNGTC	1 cut(s)	1756
AjnI	CCWGG	2 cut(s)	1015, 1912
AleI	CACNNNNGTG	1 cut(s)	600
Alw21I	GWGCWC	2 cut(s)	825, 1067
Alw26I	GTCTC	2 cut(s)	605, 878
AlwI	GGATC	6 cut(s)	209, 267, 784, 907, 920, 1733
AlwNI	CAGNNNCTG	1 cut(s)	1226
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	5 cut(s)	307, 766, 991, 1259, 2002
ApeKI	GCWGC	6 cut(s)	188, 266, 521, 605, 1045, 1534
ApoI	RAATTY	1 cut(s)	976
ArsI	GACNNNNNNTTYG	2 cut(s)	297, 329
Asp700I	GAANNNNTTC	2 cut(s)	698, 1518
AspLEI	GCGC	1 cut(s)	30
AspS9I	GGNCC	4 cut(s)	556, 992, 1192, 1440
AsuC2I	CCSGG	2 cut(s)	1095, 1445
AsuHPI	GGTGA	4 cut(s)	948, 1466, 1606, 1945
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	3 cut(s)	556, 1192, 1440
BaeGI	GKGCMC	1 cut(s)	775
BamHI	GGATCC	1 cut(s)	912
BanII	GRGCYC	1 cut(s)	825
BbrPI	CACGTG	1 cut(s)	581
BbsI	GAAGAC	4 cut(s)	36, 299, 594, 1016
Bbv12I	GWGCWC	2 cut(s)	825, 1067
BbvCI	CCTCAGC	1 cut(s)	1256
BbvI	GCAGC	6 cut(s)	175, 253, 508, 592, 1057, 1546
BccI	CCATC	7 cut(s)	174, 678, 1000, 1003, 1294, 1577, 1940
BceAI	ACGGC	1 cut(s)	753
BciT130I	CCWGG	2 cut(s)	1017, 1914
BciVI	GTATCC	1 cut(s)	1696
BclI	TGATCA	1 cut(s)	1935
BcnI	CCSGG	2 cut(s)	1095, 1445
BcoDI	GTCTC	2 cut(s)	605, 878
BfmI	CTRYAG	2 cut(s)	9, 501
BfuAI	ACCTGC	1 cut(s)	494
BfuI	GTATCC	1 cut(s)	1696
BglII	AGATCT	1 cut(s)	1516
BisI	GCNGC	9 cut(s)	51, 160, 189, 267, 522, 606, 1046, 1173, 1535
BlsI	GCNGC	9 cut(s)	52, 161, 190, 268, 523, 607, 1047, 1174, 1536
Bme1390I	CCNGG	4 cut(s)	1017, 1095, 1445, 1914
Bme18I	GGWCC	3 cut(s)	556, 1192, 1440
BmeRI	GACNNNNNGTC	1 cut(s)	1756
BmeT110I	CYCGRG	1 cut(s)	729
BmgT120I	GGNCC	4 cut(s)	556, 992, 1192, 1440
BmiI	GGNNCC	4 cut(s)	91, 557, 914, 1442
BmrFI	CCNGG	4 cut(s)	1017, 1095, 1445, 1914
BmsI	GCATC	3 cut(s)	44, 171, 278
BpiI	GAAGAC	4 cut(s)	36, 299, 594, 1016
BpmI	CTGGAG	3 cut(s)	588, 1677, 1935
Bpu10I	CCTNAGC	2 cut(s)	1256, 1610
BpuEI	CTTGAG	2 cut(s)	308, 1991
BpuMI	CCSGG	2 cut(s)	1095, 1445
BsaAI	YACGTR	1 cut(s)	581
BsaI	GGTCTC	1 cut(s)	605
BsaJI	CCNNGG	4 cut(s)	333, 514, 1015, 1443
Bsc4I	CCNNNNNNNGG	1 cut(s)	1451
Bse118I	RCCGGY	1 cut(s)	92
Bse1I	ACTGG	4 cut(s)	571, 861, 1479, 1588
Bse3DI	GCAATG	2 cut(s)	103, 925
BseBI	CCWGG	2 cut(s)	1017, 1914
BseDI	CCNNGG	4 cut(s)	333, 514, 1015, 1443
BseGI	GGATG	9 cut(s)	162, 166, 269, 684, 814, 1569, 1651, 1737, 1909
BseLI	CCNNNNNNNGG	1 cut(s)	1451
BseMI	GCAATG	2 cut(s)	103, 925
BseMII	CTCAG	5 cut(s)	600, 1247, 1343, 1425, 1624
BseNI	ACTGG	4 cut(s)	571, 861, 1479, 1588
BseRI	GAGGAG	1 cut(s)	1265
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	6 cut(s)	175, 253, 508, 592, 1057, 1546
BsgI	GTGCAG	1 cut(s)	2067
Bsh1236I	CGCG	1 cut(s)	30
Bsh1285I	CGRYCG	2 cut(s)	739, 1002
BshFI	GGCC	5 cut(s)	309, 768, 993, 1261, 2004
BsiEI	CGRYCG	2 cut(s)	739, 1002
BsiHKAI	GWGCWC	2 cut(s)	825, 1067
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	4 cut(s)	93, 180, 1094, 1445
BslFI	GGGAC	3 cut(s)	1126, 1787, 1994
BslI	CCNNNNNNNGG	1 cut(s)	1451
BsmAI	GTCTC	2 cut(s)	605, 878
BsmFI	GGGAC	3 cut(s)	1126, 1787, 1994
BsmI	GAATGC	1 cut(s)	480
BsnI	GGCC	5 cut(s)	309, 768, 993, 1261, 2004
Bso31I	GGTCTC	1 cut(s)	605
BsoBI	CYCGRG	1 cut(s)	729
Bsp1286I	GDGCHC	3 cut(s)	775, 825, 1067
Bsp143I	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
BspACI	CCGC	9 cut(s)	50, 159, 171, 735, 916, 1032, 1173, 1178, 1467
BspANI	GGCC	5 cut(s)	309, 768, 993, 1261, 2004
BspCNI	CTCAG	5 cut(s)	601, 1248, 1342, 1426, 1623
BspFNI	CGCG	1 cut(s)	30
BspHI	TCATGA	2 cut(s)	1294, 1323
BspLI	GGNNCC	4 cut(s)	91, 557, 914, 1442
BspMAI	CTGCAG	1 cut(s)	505
BspMI	ACCTGC	1 cut(s)	494
BspPI	GGATC	6 cut(s)	209, 267, 784, 907, 920, 1733
BspTNI	GGTCTC	1 cut(s)	605
BsrBI	CCGCTC	2 cut(s)	1175, 1180
BsrDI	GCAATG	2 cut(s)	103, 925
BsrFI	RCCGGY	1 cut(s)	92
BsrI	ACTGG	4 cut(s)	571, 861, 1479, 1588
BssAI	RCCGGY	1 cut(s)	92
BssECI	CCNNGG	4 cut(s)	333, 514, 1015, 1443
BssMI	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
BssT1I	CCWWGG	2 cut(s)	333, 514
Bst2UI	CCWGG	2 cut(s)	1017, 1914
Bst4CI	ACNGT	4 cut(s)	145, 466, 621, 1693
Bst6I	CTCTTC	1 cut(s)	1839
BstBAI	YACGTR	1 cut(s)	581
BstC8I	GCNNGC	4 cut(s)	94, 1012, 1034, 1431
BstDEI	CTNAG	7 cut(s)	609, 1122, 1256, 1329, 1434, 1610, 2076
BstEII	GGTNACC	1 cut(s)	1150
BstF5I	GGATG	9 cut(s)	162, 166, 269, 684, 814, 1569, 1651, 1737, 1909
BstFNI	CGCG	1 cut(s)	30
BstHHI	GCGC	1 cut(s)	30
BstKTI	GATC	9 cut(s)	217, 262, 792, 915, 1342, 1519, 1684, 1741, 1938
BstMAI	GTCTC	2 cut(s)	605, 878
BstMBI	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
BstMCI	CGRYCG	2 cut(s)	739, 1002
BstMWI	GCNNNNNNNGC	3 cut(s)	335, 1042, 1669
BstNI	CCWGG	2 cut(s)	1017, 1914
BstNSI	RCATGY	4 cut(s)	127, 1086, 1189, 1718
BstPI	GGTNACC	1 cut(s)	1150
BstSCI	CCNGG	4 cut(s)	1015, 1093, 1443, 1912
BstSFI	CTRYAG	2 cut(s)	9, 501
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	1 cut(s)	30
BstV1I	GCAGC	6 cut(s)	175, 253, 508, 592, 1057, 1546
BstV2I	GAAGAC	4 cut(s)	36, 299, 594, 1016
BstX2I	RGATCY	3 cut(s)	912, 1516, 1738
BstYI	RGATCY	3 cut(s)	912, 1516, 1738
BsuI	GTATCC	1 cut(s)	1696
BsuRI	GGCC	5 cut(s)	309, 768, 993, 1261, 2004
BtsCI	GGATG	9 cut(s)	162, 166, 269, 684, 814, 1569, 1651, 1737, 1909
BtsI	GCAGTG	4 cut(s)	498, 717, 1721, 2055
BtsIMutI	CAGTG	8 cut(s)	498, 564, 702, 717, 854, 1721, 1945, 2055
BveI	ACCTGC	1 cut(s)	494
Cac8I	GCNNGC	4 cut(s)	94, 1012, 1034, 1431
CaiI	CAGNNNCTG	1 cut(s)	1226
CciI	TCATGA	2 cut(s)	1294, 1323
CfoI	GCGC	1 cut(s)	30
Cfr10I	RCCGGY	1 cut(s)	92
Cfr13I	GGNCC	4 cut(s)	556, 992, 1192, 1440
Csp6I	GTAC	1 cut(s)	949
CviQI	GTAC	1 cut(s)	949
DdeI	CTNAG	7 cut(s)	609, 1122, 1256, 1329, 1434, 1610, 2076
DpnI	GATC	9 cut(s)	216, 261, 791, 914, 1341, 1518, 1683, 1740, 1937
DpnII	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
DriI	GACNNNNNGTC	1 cut(s)	1756
EaeI	YGGCCR	1 cut(s)	766
Eam1104I	CTCTTC	1 cut(s)	1839
Eam1105I	GACNNNNNGTC	1 cut(s)	1756
EarI	CTCTTC	1 cut(s)	1839
Ecl136II	GAGCTC	1 cut(s)	823
Eco130I	CCWWGG	2 cut(s)	333, 514
Eco147I	AGGCCT	2 cut(s)	1261, 2004
Eco24I	GRGCYC	1 cut(s)	825
Eco31I	GGTCTC	1 cut(s)	605
Eco47I	GGWCC	3 cut(s)	556, 1192, 1440
Eco53kI	GAGCTC	1 cut(s)	823
Eco57I	CTGAAG	2 cut(s)	726, 1533
Eco72I	CACGTG	1 cut(s)	581
Eco88I	CYCGRG	1 cut(s)	729
Eco91I	GGTNACC	1 cut(s)	1150
EcoICRI	GAGCTC	1 cut(s)	823
EcoO109I	RGGNCCY	2 cut(s)	556, 1440
EcoO65I	GGTNACC	1 cut(s)	1150
EcoRII	CCWGG	2 cut(s)	1015, 1912
EcoT14I	CCWWGG	2 cut(s)	333, 514
EcoT22I	ATGCAT	2 cut(s)	641, 1084
EcoT38I	GRGCYC	1 cut(s)	825
ErhI	CCWWGG	2 cut(s)	333, 514
FaqI	GGGAC	3 cut(s)	1126, 1787, 1994
FauI	CCCGC	2 cut(s)	178, 1025
FauNDI	CATATG	1 cut(s)	655
FbaI	TGATCA	1 cut(s)	1935
Fnu4HI	GCNGC	9 cut(s)	51, 160, 189, 267, 522, 606, 1046, 1173, 1535
FokI	GGATG	9 cut(s)	149, 153, 256, 671, 801, 1556, 1658, 1744, 1916
FriOI	GRGCYC	1 cut(s)	825
Fsp4HI	GCNGC	9 cut(s)	51, 160, 189, 267, 522, 606, 1046, 1173, 1535
GlaI	GCGC	1 cut(s)	29
GluI	GCNGC	9 cut(s)	51, 160, 189, 267, 522, 606, 1046, 1173, 1535
GsuI	CTGGAG	3 cut(s)	588, 1677, 1935
HaeIII	GGCC	5 cut(s)	309, 768, 993, 1261, 2004
HapII	CCGG	4 cut(s)	93, 180, 1094, 1445
HhaI	GCGC	1 cut(s)	30
Hin6I	GCGC	1 cut(s)	28
HinP1I	GCGC	1 cut(s)	28
HpaII	CCGG	4 cut(s)	93, 180, 1094, 1445
HphI	GGTGA	4 cut(s)	948, 1466, 1606, 1945
Hpy166II	GTNNAC	4 cut(s)	121, 651, 1472, 1542
Hpy188I	TCNGA	7 cut(s)	1069, 1233, 1500, 1513, 1738, 1762, 1825
Hpy188III	TCNNGA	9 cut(s)	729, 787, 818, 1003, 1295, 1324, 1337, 1656, 1804
Hpy8I	GTNNAC	4 cut(s)	121, 651, 1472, 1542
Hpy99I	CGWCG	2 cut(s)	1669, 2037
HpyAV	CCTTC	7 cut(s)	228, 245, 946, 1299, 1419, 1801, 1994
HpyCH4III	ACNGT	4 cut(s)	145, 466, 621, 1693
HpyCH4IV	ACGT	4 cut(s)	580, 1561, 1667, 1983
HpyF10VI	GCNNNNNNNGC	3 cut(s)	335, 1042, 1669
HpyF3I	CTNAG	7 cut(s)	609, 1122, 1256, 1329, 1434, 1610, 2076
HpySE526I	ACGT	4 cut(s)	580, 1561, 1667, 1983
HspAI	GCGC	1 cut(s)	28
KroI	GCCGGC	1 cut(s)	92
KroNI	GCCGGC	1 cut(s)	94
Ksp22I	TGATCA	1 cut(s)	1935
Kzo9I	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
LmnI	GCTCC	4 cut(s)	89, 828, 1180, 1252
Lsp1109I	GCAGC	6 cut(s)	175, 253, 508, 592, 1057, 1546
LweI	GCATC	3 cut(s)	44, 171, 278
MaeII	ACGT	4 cut(s)	580, 1561, 1667, 1983
MaeIII	GTNAC	5 cut(s)	76, 1150, 1552, 1687, 1748
MalI	GATC	9 cut(s)	216, 261, 791, 914, 1341, 1518, 1683, 1740, 1937
MbiI	CCGCTC	2 cut(s)	1175, 1180
MboI	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
MflI	RGATCY	3 cut(s)	912, 1516, 1738
MhlI	GDGCHC	3 cut(s)	775, 825, 1067
MluCI	AATT	6 cut(s)	438, 747, 976, 1369, 1779, 2058
MlyI	GAGTC	6 cut(s)	73, 321, 656, 1217, 1321, 1757
Mph1103I	ATGCAT	2 cut(s)	641, 1084
MroNI	GCCGGC	1 cut(s)	92
MroXI	GAANNNNTTC	2 cut(s)	698, 1518
MseI	TTAA	2 cut(s)	746, 1395
MslI	CAYNNNNRTG	1 cut(s)	600
MspA1I	CMGCKG	2 cut(s)	1467, 1537
MspI	CCGG	4 cut(s)	93, 180, 1094, 1445
MspR9I	CCNGG	4 cut(s)	1017, 1095, 1445, 1914
Mva1269I	GAATGC	1 cut(s)	480
MvaI	CCWGG	2 cut(s)	1017, 1914
MvnI	CGCG	1 cut(s)	30
MwoI	GCNNNNNNNGC	3 cut(s)	335, 1042, 1669
NaeI	GCCGGC	1 cut(s)	94
NciI	CCSGG	2 cut(s)	1095, 1445
NdeI	CATATG	1 cut(s)	655
NdeII	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
NgoMIV	GCCGGC	1 cut(s)	92
NlaIV	GGNNCC	4 cut(s)	91, 557, 914, 1442
NmeAIII	GCCGAG	1 cut(s)	335
NmuCI	GTSAC	4 cut(s)	76, 1552, 1687, 1748
NsiI	ATGCAT	2 cut(s)	641, 1084
NspI	RCATGY	4 cut(s)	127, 1086, 1189, 1718
OliI	CACNNNNGTG	1 cut(s)	600
PaeR7I	CTCGAG	1 cut(s)	729
PagI	TCATGA	2 cut(s)	1294, 1323
PceI	AGGCCT	2 cut(s)	1261, 2004
PciI	ACATGT	3 cut(s)	123, 1185, 1714
PcsI	WCGNNNNNNNCGW	2 cut(s)	685, 736
PctI	GAATGC	1 cut(s)	480
PdiI	GCCGGC	1 cut(s)	94
PdmI	GAANNNNTTC	2 cut(s)	698, 1518
PfeI	GAWTC	6 cut(s)	699, 1090, 1634, 1652, 1820, 2037
PkrI	GCNGC	9 cut(s)	52, 161, 190, 268, 523, 607, 1047, 1174, 1536
PleI	GAGTC	6 cut(s)	73, 320, 655, 1217, 1321, 1757
PmaCI	CACGTG	1 cut(s)	581
PmlI	CACGTG	1 cut(s)	581
PpsI	GAGTC	6 cut(s)	73, 320, 655, 1217, 1321, 1757
Ppu21I	YACGTR	1 cut(s)	581
PpuMI	RGGWCCY	2 cut(s)	556, 1440
PscI	ACATGT	3 cut(s)	123, 1185, 1714
Psp124BI	GAGCTC	1 cut(s)	825
Psp5II	RGGWCCY	2 cut(s)	556, 1440
Psp6I	CCWGG	2 cut(s)	1015, 1912
PspCI	CACGTG	1 cut(s)	581
PspEI	GGTNACC	1 cut(s)	1150
PspGI	CCWGG	2 cut(s)	1015, 1912
PspN4I	GGNNCC	4 cut(s)	91, 557, 914, 1442
PspPI	GGNCC	4 cut(s)	556, 992, 1192, 1440
PspPPI	RGGWCCY	2 cut(s)	556, 1440
PstI	CTGCAG	1 cut(s)	505
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	3 cut(s)	912, 1516, 1738
PvuII	CAGCTG	1 cut(s)	1537
RsaI	GTAC	1 cut(s)	950
RsaNI	GTAC	1 cut(s)	949
RseI	CAYNNNNRTG	1 cut(s)	600
SacI	GAGCTC	1 cut(s)	825
SaqAI	TTAA	2 cut(s)	746, 1395
SatI	GCNGC	9 cut(s)	51, 160, 189, 267, 522, 606, 1046, 1173, 1535
Sau3AI	GATC	9 cut(s)	214, 259, 789, 912, 1339, 1516, 1681, 1738, 1935
Sau96I	GGNCC	4 cut(s)	556, 992, 1192, 1440
SchI	GAGTC	6 cut(s)	73, 321, 656, 1217, 1321, 1757
ScrFI	CCNGG	4 cut(s)	1017, 1095, 1445, 1914
SduI	GDGCHC	3 cut(s)	775, 825, 1067
SfaNI	GCATC	3 cut(s)	44, 171, 278
SfcI	CTRYAG	2 cut(s)	9, 501
Sfr274I	CTCGAG	1 cut(s)	729
SinI	GGWCC	3 cut(s)	556, 1192, 1440
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	1 cut(s)	600
SmlI	CTYRAG	3 cut(s)	287, 729, 2006
SmoI	CTYRAG	3 cut(s)	287, 729, 2006
Sse9I	AATT	6 cut(s)	438, 747, 976, 1369, 1779, 2058
SseBI	AGGCCT	2 cut(s)	1261, 2004
SsiI	CCGC	9 cut(s)	50, 159, 171, 735, 916, 1032, 1173, 1178, 1467
SstI	GAGCTC	1 cut(s)	825
StuI	AGGCCT	2 cut(s)	1261, 2004
StyD4I	CCNGG	4 cut(s)	1015, 1093, 1443, 1912
StyI	CCWWGG	2 cut(s)	333, 514
TaaI	ACNGT	4 cut(s)	145, 466, 621, 1693
TaiI	ACGT	4 cut(s)	583, 1564, 1670, 1986
TaqI	TCGA	6 cut(s)	405, 679, 730, 1684, 1818, 2035
TaqII	GACCGA	3 cut(s)	606, 988, 1180
TasI	AATT	6 cut(s)	438, 747, 976, 1369, 1779, 2058
TatI	WGTACW	1 cut(s)	948
TauI	GCSGC	3 cut(s)	53, 162, 1175
TfiI	GAWTC	6 cut(s)	699, 1090, 1634, 1652, 1820, 2037
Tru1I	TTAA	2 cut(s)	746, 1395
Tru9I	TTAA	2 cut(s)	746, 1395
TscAI	CASTG	8 cut(s)	505, 571, 709, 724, 861, 1728, 1945, 2055
TseFI	GTSAC	4 cut(s)	76, 1552, 1687, 1748
TseI	GCWGC	6 cut(s)	188, 266, 521, 605, 1045, 1534
Tsp45I	GTSAC	4 cut(s)	76, 1552, 1687, 1748
TspGWI	ACGGA	3 cut(s)	72, 590, 677
TspRI	CASTG	8 cut(s)	505, 571, 709, 724, 861, 1728, 1945, 2055
VpaK11BI	GGWCC	3 cut(s)	556, 1192, 1440
XapI	RAATTY	1 cut(s)	976
XceI	RCATGY	4 cut(s)	127, 1086, 1189, 1718
XhoI	CTCGAG	1 cut(s)	729
XmnI	GAANNNNTTC	2 cut(s)	698, 1518
Zsp2I	ATGCAT	2 cut(s)	641, 1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.