Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002664

Physical Location & Seq

Genomic Coordinates Forward (+)

9513024 .. 9514552

Gene Structure 1529 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G22420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGTCTCTTCTTCCCCATCTCATCCTCTACCTAACACTTTTGACGGTGGTTGTTACTGGAGAAACTCTCCGACCAAGATTCTACAGCGAGACATGCCCTGAAGCTGAATCCATAGTAAGAAGAGAAATGAAGAAAGCAATGATCAAAGAAGCAAGAAGCGTCGCTTCCGTCATGCGTTTCCAATTTCACGACTGTTTCGTCAATGGATGTGACGCATCTCTGTTGCTTGACGACACACCAAACATGCTTGGTGAAAAACTATCACTTTCCAACATCGATTCACTAAGATCTTTCGAAGTCGTTGACGACATTAAAGAAGCTCTAGAGAAAGCTTGTCCAGCTACTGTTTCTTGTGCCGATATCGTTATCATGGCCGCTCGTGACGCCGTTGCTCTTACAGGAGGACCAGATTGGGAAGTGAAGCTAGGGAGGAAAGACAGTTTAACAGCGAGTCAGCAAGATTCCGACGATATAATGCCAAGTCCAAGAGCCAACGCAACTTTCTTGATTGATCTCTTCGAAAGATTCAATCTTTCTGTAAAAGACATGGTTGCTTTATCAGGGTCACACTCAATAGGTCAAGGTCGGTGTTTTTCAATCATGTTCAGACTTTATAACCAATCCGGTTCTGGTAAACCGGATCCAGCTCTTGAACCGAGTTACCGTAAGAAGCTTGATAAGCTTTGTCCTTTGGGTGGAGATGAGAATGTGACTGGAGATCTAGATGCAACACCTCAGGTTTTTGATAATCAGTATTTCAAAGACTTGGTTTCAGGGAGAGGGTTTCTTAACTCTGATCAGACTTTGTACACGAATCTAGTGACGAGAGAGTATGTGAAGATGTTTAGTGAGGATCAAGATGAGTTCTTTAGGGCTTTTGCAGAAGGCATGGTGAAGTTGGGTGATTTGCAATCTGGGAGACCTGGTGAGATTAGGTTTAATTGTAGAGTTGTTAATAGAAGGCCTATTGATGTATTGCTTGTATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009505 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009987 GO:0010228 GO:0019438 GO:0019748 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

329

Amino Acids

36.67

Weight (kDa)

5.05

Isoelectric Point (pI)

37.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	39 - 285	6.1e-78	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22420
fragaria_vesca	FvH4_1g20350 FvH4_1g20360 FvH4_1g20360
malus_domestica	MD01G1034400.v1.1 MD01G1034500.v1.1 MD01G1034900.v1.1 MD15G1321200.v1.1 MD15G1321300.v1.1 MD15G1321400.v1.1
prunus_persica	Prupe.6G191800_v2.0.a1 Prupe.6G191900_v2.0.a1 Prupe.6G192000_v2.0.a1
pyrus_communis	pycom01g06150 pycom01g06160 pycom01g06190 pycom15g28200 pycom15g28210
rosa_chinensis	RchiOBHm_Chr2g0112481 RchiOBHm_Chr2g0112491
rosa_laevigata	RLG00000017984 RLG00000017985
rosa_multiflora	Rmu_co8298115.1_g000001 Rmu_co8310909.1_g000001 Rmu_sc0013522.1_g000001 Rmu_sc0026466.1_g000001
rosa_roxburghii	Rroxscaffold_2G00131380 Rroxscaffold_2G00131390
rosa_rugosa	Rorug02G0181300 Rorug02G0181300
rosa_samantha	Rh2AG234300 Rh2AG234400 Rh2BG247900 Rh2BG248000 Rh2CG238900 Rh2CG239000 Rh2DG241900 Rh2DG242000
rosa_wichuraiana	Rw2G018150 Rw2G018160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	615
AasI	GACNNNNNNGTC	1 cut(s)	197
AccBSI	CCGCTC	1 cut(s)	377
AciI	CCGC	1 cut(s)	375
AclWI	GGATC	3 cut(s)	635, 648, 861
AcoI	YGGCCR	1 cut(s)	372
AcuI	CTGAAG	1 cut(s)	120
AcyI	GRCGYC	1 cut(s)	384
AfaI	GTAC	1 cut(s)	809
AfiI	CCNNNNNNNGG	1 cut(s)	695
AgsI	TTSAA	4 cut(s)	529, 597, 653, 760
AjnI	CCWGG	1 cut(s)	922
AjuI	GAANNNNNNNTTGG	2 cut(s)	485, 517
AluBI	AGCT	8 cut(s)	104, 320, 332, 341, 424, 647, 673, 682
AluI	AGCT	8 cut(s)	104, 320, 332, 341, 424, 647, 673, 682
Alw26I	GTCTC	3 cut(s)	9, 83, 913
AlwI	GGATC	3 cut(s)	635, 648, 861
AlwNI	CAGNNNCTG	1 cut(s)	344
AoxI	GGCC	2 cut(s)	372, 962
AspS9I	GGNCC	1 cut(s)	404
AsuHPI	GGTGA	4 cut(s)	263, 904, 914, 938
AsuII	TTCGAA	2 cut(s)	294, 519
AvaII	GGWCC	1 cut(s)	404
AxyI	CCTNAGG	1 cut(s)	735
BamHI	GGATCC	1 cut(s)	640
BauI	CACGAG	1 cut(s)	378
BccI	CCATC	1 cut(s)	24
BceAI	ACGGC	1 cut(s)	371
BciT130I	CCWGG	1 cut(s)	924
BclI	TGATCA	2 cut(s)	141, 796
BcoDI	GTCTC	3 cut(s)	9, 83, 913
BfaI	CTAG	4 cut(s)	323, 425, 722, 818
BfmI	CTRYAG	1 cut(s)	82
BglII	AGATCT	2 cut(s)	287, 718
BisI	GCNGC	1 cut(s)	375
BlsI	GCNGC	1 cut(s)	376
Bme1390I	CCNGG	1 cut(s)	924
Bme18I	GGWCC	1 cut(s)	404
BmgT120I	GGNCC	1 cut(s)	404
BmiI	GGNNCC	1 cut(s)	642
BmrFI	CCNGG	1 cut(s)	924
BmsI	GCATC	2 cut(s)	224, 715
BplI	GAGNNNNNCTC	2 cut(s)	51, 83
BpmI	CTGGAG	2 cut(s)	78, 735
Bpu14I	TTCGAA	2 cut(s)	294, 519
Bsa29I	ATCGAT	1 cut(s)	276
BsaHI	GRCGYC	1 cut(s)	384
BsaI	GGTCTC	1 cut(s)	913
BsaWI	WCCGGW	2 cut(s)	623, 637
BsaXI	ACNNNNNCTCC	2 cut(s)	910, 940
Bsc4I	CCNNNNNNNGG	1 cut(s)	695
Bse1I	ACTGG	2 cut(s)	61, 718
Bse21I	CCTNAGG	1 cut(s)	735
Bse3DI	GCAATG	1 cut(s)	144
BseBI	CCWGG	1 cut(s)	924
BseCI	ATCGAT	1 cut(s)	276
BseGI	GGATG	2 cut(s)	21, 212
BseLI	CCNNNNNNNGG	1 cut(s)	695
BseMI	GCAATG	1 cut(s)	144
BseMII	CTCAG	1 cut(s)	749
BseNI	ACTGG	2 cut(s)	61, 718
BshFI	GGCC	2 cut(s)	374, 964
BshVI	ATCGAT	1 cut(s)	276
BsiSI	CCGG	2 cut(s)	624, 638
BslI	CCNNNNNNNGG	1 cut(s)	695
BsmAI	GTCTC	3 cut(s)	9, 83, 913
BsnI	GGCC	2 cut(s)	374, 964
Bso31I	GGTCTC	1 cut(s)	913
Bsp119I	TTCGAA	2 cut(s)	294, 519
Bsp1407I	TGTACA	1 cut(s)	807
Bsp143I	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
BspACI	CCGC	1 cut(s)	375
BspANI	GGCC	2 cut(s)	374, 964
BspCNI	CTCAG	1 cut(s)	748
BspDI	ATCGAT	1 cut(s)	276
BspLI	GGNNCC	1 cut(s)	642
BspPI	GGATC	3 cut(s)	635, 648, 861
BspT104I	TTCGAA	2 cut(s)	294, 519
BspTNI	GGTCTC	1 cut(s)	913
BsrBI	CCGCTC	1 cut(s)	377
BsrDI	GCAATG	1 cut(s)	144
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	2 cut(s)	61, 718
BssMI	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
BssNI	GRCGYC	1 cut(s)	384
BssSI	CACGAG	1 cut(s)	378
Bst2BI	CACGAG	1 cut(s)	378
Bst2UI	CCWGG	1 cut(s)	924
Bst4CI	ACNGT	5 cut(s)	46, 194, 346, 440, 665
Bst6I	CTCTTC	3 cut(s)	12, 115, 521
BstACI	GRCGYC	1 cut(s)	384
BstAUI	TGTACA	1 cut(s)	807
BstBI	TTCGAA	2 cut(s)	294, 519
BstDEI	CTNAG	2 cut(s)	284, 735
BstF5I	GGATG	2 cut(s)	21, 212
BstKTI	GATC	7 cut(s)	144, 290, 514, 643, 721, 799, 856
BstMAI	GTCTC	3 cut(s)	9, 83, 913
BstMBI	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
BstMWI	GCNNNNNNNGC	4 cut(s)	93, 338, 383, 679
BstNI	CCWGG	1 cut(s)	924
BstNSI	RCATGY	2 cut(s)	96, 247
BstSCI	CCNGG	1 cut(s)	922
BstSFI	CTRYAG	1 cut(s)	82
BstX2I	RGATCY	3 cut(s)	287, 640, 718
BstYI	RGATCY	3 cut(s)	287, 640, 718
Bsu15I	ATCGAT	1 cut(s)	276
Bsu36I	CCTNAGG	1 cut(s)	735
BsuRI	GGCC	2 cut(s)	374, 964
BsuTUI	ATCGAT	1 cut(s)	276
BtsCI	GGATG	2 cut(s)	21, 212
CaiI	CAGNNNCTG	1 cut(s)	344
Cfr13I	GGNCC	1 cut(s)	404
ClaI	ATCGAT	1 cut(s)	276
CseI	GACGC	3 cut(s)	148, 221, 392
CsiI	ACCWGGT	1 cut(s)	922
Csp6I	GTAC	1 cut(s)	808
CviAII	CATG	7 cut(s)	93, 172, 244, 370, 547, 601, 889
CviQI	GTAC	1 cut(s)	808
DdeI	CTNAG	2 cut(s)	284, 735
DpnI	GATC	7 cut(s)	143, 289, 513, 642, 720, 798, 855
DpnII	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
DrdI	GACNNNNNNGTC	1 cut(s)	197
DseDI	GACNNNNNNGTC	1 cut(s)	197
EaeI	YGGCCR	1 cut(s)	372
Eam1104I	CTCTTC	3 cut(s)	12, 115, 521
EarI	CTCTTC	3 cut(s)	12, 115, 521
Eco147I	AGGCCT	1 cut(s)	964
Eco31I	GGTCTC	1 cut(s)	913
Eco32I	GATATC	1 cut(s)	361
Eco47I	GGWCC	1 cut(s)	404
Eco57I	CTGAAG	1 cut(s)	120
Eco81I	CCTNAGG	1 cut(s)	735
EcoRII	CCWGG	1 cut(s)	922
EcoRV	GATATC	1 cut(s)	361
FaeI	CATG	7 cut(s)	96, 175, 247, 373, 550, 604, 892
FalI	AAGNNNNNCTT	2 cut(s)	148, 180
FatI	CATG	7 cut(s)	92, 171, 243, 369, 546, 600, 888
FbaI	TGATCA	2 cut(s)	141, 796
Fnu4HI	GCNGC	1 cut(s)	375
FokI	GGATG	2 cut(s)	8, 219
Fsp4HI	GCNGC	1 cut(s)	375
FspBI	CTAG	4 cut(s)	323, 425, 722, 818
GluI	GCNGC	1 cut(s)	375
GsuI	CTGGAG	2 cut(s)	78, 735
HaeIII	GGCC	2 cut(s)	374, 964
HapII	CCGG	2 cut(s)	624, 638
HgaI	GACGC	3 cut(s)	148, 221, 392
Hin1I	GRCGYC	1 cut(s)	384
Hin1II	CATG	7 cut(s)	96, 175, 247, 373, 550, 604, 892
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	3 cut(s)	330, 671, 680
HinfI	GANTC	7 cut(s)	78, 107, 278, 451, 461, 525, 814
HpaII	CCGG	2 cut(s)	624, 638
HphI	GGTGA	4 cut(s)	263, 904, 914, 938
Hpy166II	GTNNAC	3 cut(s)	304, 635, 810
Hpy188I	TCNGA	5 cut(s)	71, 466, 608, 796, 801
Hpy188III	TCNNGA	8 cut(s)	188, 323, 380, 505, 650, 722, 857, 987
Hpy8I	GTNNAC	3 cut(s)	304, 635, 810
Hpy99I	CGWCG	2 cut(s)	164, 470
HpyAV	CCTTC	2 cut(s)	878, 954
HpyCH4III	ACNGT	5 cut(s)	46, 194, 346, 440, 665
HpyCH4V	TGCA	3 cut(s)	728, 881, 910
HpyF10VI	GCNNNNNNNGC	4 cut(s)	93, 338, 383, 679
HpyF3I	CTNAG	2 cut(s)	284, 735
Hsp92I	GRCGYC	1 cut(s)	384
Hsp92II	CATG	7 cut(s)	96, 175, 247, 373, 550, 604, 892
Ksp22I	TGATCA	2 cut(s)	141, 796
Kzo9I	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
LweI	GCATC	2 cut(s)	224, 715
MabI	ACCWGGT	1 cut(s)	922
MaeI	CTAG	4 cut(s)	323, 425, 722, 818
MaeIII	GTNAC	7 cut(s)	52, 209, 380, 564, 659, 709, 820
MalI	GATC	7 cut(s)	143, 289, 513, 642, 720, 798, 855
MbiI	CCGCTC	1 cut(s)	377
MboI	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
MboII	GAAGA	4 cut(s)	132, 142, 508, 850
MflI	RGATCY	3 cut(s)	287, 640, 718
MluCI	AATT	2 cut(s)	182, 940
MlyI	GAGTC	1 cut(s)	460
MmeI	TCCRAC	3 cut(s)	94, 294, 489
MnlI	CCTC	6 cut(s)	35, 395, 423, 744, 773, 844
MseI	TTAA	5 cut(s)	312, 443, 789, 939, 954
MspI	CCGG	2 cut(s)	624, 638
MspR9I	CCNGG	1 cut(s)	924
MvaI	CCWGG	1 cut(s)	924
MwoI	GCNNNNNNNGC	4 cut(s)	93, 338, 383, 679
NdeII	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
NlaIII	CATG	7 cut(s)	96, 175, 247, 373, 550, 604, 892
NlaIV	GGNNCC	1 cut(s)	642
NmuCI	GTSAC	5 cut(s)	209, 380, 564, 709, 820
NspI	RCATGY	2 cut(s)	96, 247
NspV	TTCGAA	2 cut(s)	294, 519
PceI	AGGCCT	1 cut(s)	964
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PfeI	GAWTC	6 cut(s)	78, 107, 278, 461, 525, 814
PkrI	GCNGC	1 cut(s)	376
PleI	GAGTC	1 cut(s)	459
PpsI	GAGTC	1 cut(s)	459
PsiI	TTATAA	1 cut(s)	615
Psp6I	CCWGG	1 cut(s)	922
PspGI	CCWGG	1 cut(s)	922
PspN4I	GGNNCC	1 cut(s)	642
PspPI	GGNCC	1 cut(s)	404
PstNI	CAGNNNCTG	1 cut(s)	344
PsuI	RGATCY	3 cut(s)	287, 640, 718
RsaI	GTAC	1 cut(s)	809
RsaNI	GTAC	1 cut(s)	808
SaqAI	TTAA	5 cut(s)	312, 443, 789, 939, 954
SatI	GCNGC	1 cut(s)	375
Sau3AI	GATC	7 cut(s)	141, 287, 511, 640, 718, 796, 853
Sau96I	GGNCC	1 cut(s)	404
SchI	GAGTC	1 cut(s)	460
ScrFI	CCNGG	1 cut(s)	924
SexAI	ACCWGGT	1 cut(s)	922
SfaNI	GCATC	2 cut(s)	224, 715
SfcI	CTRYAG	1 cut(s)	82
SfuI	TTCGAA	2 cut(s)	294, 519
SinI	GGWCC	1 cut(s)	404
Sse9I	AATT	2 cut(s)	182, 940
SseBI	AGGCCT	1 cut(s)	964
SsiI	CCGC	1 cut(s)	375
SspMI	CTAG	4 cut(s)	323, 425, 722, 818
StuI	AGGCCT	1 cut(s)	964
StyD4I	CCNGG	1 cut(s)	922
TaaI	ACNGT	5 cut(s)	46, 194, 346, 440, 665
TaqI	TCGA	3 cut(s)	276, 294, 519
TasI	AATT	2 cut(s)	182, 940
TatI	WGTACW	1 cut(s)	807
TauI	GCSGC	1 cut(s)	377
TfiI	GAWTC	6 cut(s)	78, 107, 278, 461, 525, 814
Tru1I	TTAA	5 cut(s)	312, 443, 789, 939, 954
Tru9I	TTAA	5 cut(s)	312, 443, 789, 939, 954
TseFI	GTSAC	5 cut(s)	209, 380, 564, 709, 820
Tsp45I	GTSAC	5 cut(s)	209, 380, 564, 709, 820
TspDTI	ATGAA	1 cut(s)	143
TspGWI	ACGGA	1 cut(s)	157
VpaK11BI	GGWCC	1 cut(s)	404
XbaI	TCTAGA	2 cut(s)	322, 721
XceI	RCATGY	2 cut(s)	96, 247
XcmI	CCANNNNNNNNNTGG	1 cut(s)	626
XspI	CTAG	4 cut(s)	323, 425, 722, 818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.