Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22420 |
| fragaria_vesca | FvH4_1g20350 FvH4_1g20360 FvH4_1g20360 |
| malus_domestica | MD01G1034400.v1.1 MD01G1034500.v1.1 MD01G1034900.v1.1 MD15G1321200.v1.1 MD15G1321300.v1.1 MD15G1321400.v1.1 |
| prunus_persica | Prupe.6G191800_v2.0.a1 Prupe.6G191900_v2.0.a1 Prupe.6G192000_v2.0.a1 |
| pyrus_communis | pycom01g06150 pycom01g06160 pycom01g06190 pycom15g28200 pycom15g28210 |
| rosa_chinensis | RchiOBHm_Chr2g0112481 RchiOBHm_Chr2g0112491 |
| rosa_laevigata | RLG00000017984 RLG00000017985 |
| rosa_multiflora | Rmu_co8298115.1_g000001 Rmu_co8310909.1_g000001 Rmu_sc0013522.1_g000001 Rmu_sc0026466.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131380 Rroxscaffold_2G00131390 |
| rosa_rugosa | Rorug02G0181300 Rorug02G0181300 |
| rosa_samantha | Rh2AG234300 Rh2AG234400 Rh2BG247900 Rh2BG248000 Rh2CG238900 Rh2CG239000 Rh2DG241900 Rh2DG242000 |
| rosa_wichuraiana | Rw2G018150 Rw2G018160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 44 |
| AciI | CCGC | 2 cut(s) | 42, 48 |
| AclI | AACGTT | 1 cut(s) | 699 |
| AclWI | GGATC | 3 cut(s) | 134, 795, 915 |
| AcsI | RAATTY | 3 cut(s) | 268, 515, 781 |
| AfaI | GTAC | 2 cut(s) | 605, 746 |
| AgsI | TTSAA | 5 cut(s) | 159, 644, 751, 862, 901 |
| AjnI | CCWGG | 1 cut(s) | 913 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 476, 508 |
| AluBI | AGCT | 4 cut(s) | 432, 575, 664, 673 |
| AluI | AGCT | 4 cut(s) | 432, 575, 664, 673 |
| Alw26I | GTCTC | 2 cut(s) | 9, 600 |
| AlwI | GGATC | 3 cut(s) | 134, 795, 915 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 635 |
| AoxI | GGCC | 3 cut(s) | 321, 622, 864 |
| ApeKI | GCWGC | 1 cut(s) | 308 |
| ApoI | RAATTY | 3 cut(s) | 268, 515, 781 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 90, 122, 623, 655 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 128, 337, 833 |
| AspLEI | GCGC | 2 cut(s) | 168, 347 |
| AspS9I | GGNCC | 3 cut(s) | 395, 622, 691 |
| AsuC2I | CCSGG | 4 cut(s) | 66, 145, 330, 626 |
| AsuHPI | GGTGA | 4 cut(s) | 124, 714, 905, 934 |
| AvaII | GGWCC | 2 cut(s) | 395, 691 |
| BaeGI | GKGCMC | 1 cut(s) | 89 |
| BanII | GRGCYC | 1 cut(s) | 557 |
| BbvI | GCAGC | 1 cut(s) | 320 |
| BccI | CCATC | 1 cut(s) | 883 |
| BciT130I | CCWGG | 1 cut(s) | 915 |
| BcnI | CCSGG | 4 cut(s) | 66, 145, 330, 626 |
| BcoDI | GTCTC | 2 cut(s) | 9, 600 |
| BfaI | CTAG | 3 cut(s) | 239, 369, 816 |
| BglII | AGATCT | 1 cut(s) | 278 |
| BisI | GCNGC | 1 cut(s) | 309 |
| BlsI | GCNGC | 1 cut(s) | 310 |
| BmcAI | AGTACT | 1 cut(s) | 746 |
| Bme1390I | CCNGG | 5 cut(s) | 66, 145, 330, 626, 915 |
| Bme18I | GGWCC | 2 cut(s) | 395, 691 |
| BmgT120I | GGNCC | 3 cut(s) | 395, 622, 691 |
| BmrFI | CCNGG | 5 cut(s) | 66, 145, 330, 626, 915 |
| BmsI | GCATC | 2 cut(s) | 364, 706 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 234, 266 |
| BpmI | CTGGAG | 1 cut(s) | 411 |
| BpuMI | CCSGG | 4 cut(s) | 66, 145, 330, 626 |
| BsaJI | CCNNGG | 6 cut(s) | 64, 143, 303, 312, 847, 914 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 9, 39, 866, 896 |
| Bse1I | ACTGG | 2 cut(s) | 394, 742 |
| BseBI | CCWGG | 1 cut(s) | 915 |
| BseDI | CCNNGG | 6 cut(s) | 64, 143, 303, 312, 847, 914 |
| BseGI | GGATG | 1 cut(s) | 479 |
| BseMII | CTCAG | 2 cut(s) | 265, 468 |
| BseNI | ACTGG | 2 cut(s) | 394, 742 |
| BseSI | GKGCMC | 1 cut(s) | 89 |
| BseXI | GCAGC | 1 cut(s) | 320 |
| Bsh1236I | CGCG | 1 cut(s) | 44 |
| BshFI | GGCC | 3 cut(s) | 323, 624, 866 |
| BsiSI | CCGG | 5 cut(s) | 66, 145, 330, 615, 625 |
| BslFI | GGGAC | 2 cut(s) | 312, 663 |
| BsmAI | GTCTC | 2 cut(s) | 9, 600 |
| BsmFI | GGGAC | 2 cut(s) | 312, 663 |
| BsnI | GGCC | 3 cut(s) | 323, 624, 866 |
| Bsp1286I | GDGCHC | 2 cut(s) | 89, 557 |
| Bsp1407I | TGTACA | 1 cut(s) | 603 |
| Bsp143I | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| BspACI | CCGC | 2 cut(s) | 42, 48 |
| BspANI | GGCC | 3 cut(s) | 323, 624, 866 |
| BspCNI | CTCAG | 2 cut(s) | 264, 467 |
| BspFNI | CGCG | 1 cut(s) | 44 |
| BspHI | TCATGA | 1 cut(s) | 117 |
| BspPI | GGATC | 3 cut(s) | 134, 795, 915 |
| BsrGI | TGTACA | 1 cut(s) | 603 |
| BsrI | ACTGG | 2 cut(s) | 394, 742 |
| BssECI | CCNNGG | 6 cut(s) | 64, 143, 303, 312, 847, 914 |
| BssMI | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| BssT1I | CCWWGG | 3 cut(s) | 303, 312, 847 |
| Bst2UI | CCWGG | 1 cut(s) | 915 |
| Bst4CI | ACNGT | 1 cut(s) | 706 |
| Bst6I | CTCTTC | 1 cut(s) | 26 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 635 |
| BstAUI | TGTACA | 1 cut(s) | 603 |
| BstC8I | GCNNGC | 1 cut(s) | 442 |
| BstDEI | CTNAG | 4 cut(s) | 251, 275, 454, 682 |
| BstF5I | GGATG | 1 cut(s) | 479 |
| BstFNI | CGCG | 1 cut(s) | 44 |
| BstHHI | GCGC | 2 cut(s) | 168, 347 |
| BstKTI | GATC | 5 cut(s) | 142, 281, 523, 790, 910 |
| BstMAI | GTCTC | 2 cut(s) | 9, 600 |
| BstMBI | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 308, 635, 670 |
| BstNI | CCWGG | 1 cut(s) | 915 |
| BstSCI | CCNGG | 5 cut(s) | 64, 143, 328, 624, 913 |
| BstSLI | GKGCMC | 1 cut(s) | 89 |
| BstUI | CGCG | 1 cut(s) | 44 |
| BstV1I | GCAGC | 1 cut(s) | 320 |
| BstX2I | RGATCY | 2 cut(s) | 139, 278 |
| BstYI | RGATCY | 2 cut(s) | 139, 278 |
| BsuRI | GGCC | 3 cut(s) | 323, 624, 866 |
| BtsCI | GGATG | 1 cut(s) | 479 |
| Cac8I | GCNNGC | 1 cut(s) | 442 |
| CaiI | CAGNNNCTG | 1 cut(s) | 635 |
| CciI | TCATGA | 1 cut(s) | 117 |
| CfoI | GCGC | 2 cut(s) | 168, 347 |
| Cfr13I | GGNCC | 3 cut(s) | 395, 622, 691 |
| CseI | GACGC | 3 cut(s) | 33, 212, 708 |
| Csp6I | GTAC | 2 cut(s) | 604, 745 |
| CviAII | CATG | 7 cut(s) | 118, 163, 179, 235, 361, 466, 592 |
| CviQI | GTAC | 2 cut(s) | 604, 745 |
| DdeI | CTNAG | 4 cut(s) | 251, 275, 454, 682 |
| DpnI | GATC | 5 cut(s) | 141, 280, 522, 789, 909 |
| DpnII | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| Eam1104I | CTCTTC | 1 cut(s) | 26 |
| EarI | CTCTTC | 1 cut(s) | 26 |
| EciI | GGCGGA | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 3 cut(s) | 303, 312, 847 |
| Eco147I | AGGCCT | 2 cut(s) | 323, 866 |
| Eco24I | GRGCYC | 1 cut(s) | 557 |
| Eco47I | GGWCC | 2 cut(s) | 395, 691 |
| EcoRI | GAATTC | 1 cut(s) | 781 |
| EcoRII | CCWGG | 1 cut(s) | 913 |
| EcoT14I | CCWWGG | 3 cut(s) | 303, 312, 847 |
| EcoT38I | GRGCYC | 1 cut(s) | 557 |
| ErhI | CCWWGG | 3 cut(s) | 303, 312, 847 |
| FaeI | CATG | 7 cut(s) | 121, 166, 182, 238, 364, 469, 595 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 296, 328 |
| FaqI | GGGAC | 2 cut(s) | 312, 663 |
| FatI | CATG | 7 cut(s) | 117, 162, 178, 234, 360, 465, 591 |
| Fnu4HI | GCNGC | 1 cut(s) | 309 |
| FokI | GGATG | 1 cut(s) | 466 |
| FriOI | GRGCYC | 1 cut(s) | 557 |
| Fsp4HI | GCNGC | 1 cut(s) | 309 |
| FspBI | CTAG | 3 cut(s) | 239, 369, 816 |
| GlaI | GCGC | 2 cut(s) | 167, 346 |
| GluI | GCNGC | 1 cut(s) | 309 |
| GsuI | CTGGAG | 1 cut(s) | 411 |
| HaeIII | GGCC | 3 cut(s) | 323, 624, 866 |
| HapII | CCGG | 5 cut(s) | 66, 145, 330, 615, 625 |
| HgaI | GACGC | 3 cut(s) | 33, 212, 708 |
| HhaI | GCGC | 2 cut(s) | 168, 347 |
| Hin1II | CATG | 7 cut(s) | 121, 166, 182, 238, 364, 469, 595 |
| Hin6I | GCGC | 2 cut(s) | 166, 345 |
| HinP1I | GCGC | 2 cut(s) | 166, 345 |
| HindIII | AAGCTT | 1 cut(s) | 671 |
| HinfI | GANTC | 1 cut(s) | 148 |
| HpaII | CCGG | 5 cut(s) | 66, 145, 330, 615, 625 |
| HphI | GGTGA | 4 cut(s) | 124, 714, 905, 934 |
| Hpy166II | GTNNAC | 1 cut(s) | 691 |
| Hpy188I | TCNGA | 4 cut(s) | 110, 457, 780, 787 |
| Hpy188III | TCNNGA | 2 cut(s) | 118, 369 |
| Hpy8I | GTNNAC | 1 cut(s) | 691 |
| HpyAV | CCTTC | 4 cut(s) | 118, 313, 502, 895 |
| HpyCH4III | ACNGT | 1 cut(s) | 706 |
| HpyCH4IV | ACGT | 2 cut(s) | 83, 699 |
| HpyCH4V | TGCA | 2 cut(s) | 488, 936 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 308, 635, 670 |
| HpyF3I | CTNAG | 4 cut(s) | 251, 275, 454, 682 |
| HpySE526I | ACGT | 2 cut(s) | 83, 699 |
| Hsp92II | CATG | 7 cut(s) | 121, 166, 182, 238, 364, 469, 595 |
| HspAI | GCGC | 2 cut(s) | 166, 345 |
| Kzo9I | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| Lsp1109I | GCAGC | 1 cut(s) | 320 |
| LweI | GCATC | 2 cut(s) | 364, 706 |
| MaeI | CTAG | 3 cut(s) | 239, 369, 816 |
| MaeII | ACGT | 2 cut(s) | 83, 699 |
| MaeIII | GTNAC | 6 cut(s) | 37, 200, 213, 700, 720, 893 |
| MalI | GATC | 5 cut(s) | 141, 280, 522, 789, 909 |
| MboI | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| MboII | GAAGA | 3 cut(s) | 13, 133, 432 |
| MflI | RGATCY | 2 cut(s) | 139, 278 |
| MhlI | GDGCHC | 2 cut(s) | 89, 557 |
| MluCI | AATT | 7 cut(s) | 173, 268, 333, 515, 781, 931, 946 |
| MlyI | GAGTC | 1 cut(s) | 157 |
| MmeI | TCCRAC | 1 cut(s) | 500 |
| MroXI | GAANNNNTTC | 3 cut(s) | 128, 337, 833 |
| MseI | TTAA | 4 cut(s) | 192, 843, 884, 945 |
| MslI | CAYNNNNRTG | 1 cut(s) | 359 |
| MspI | CCGG | 5 cut(s) | 66, 145, 330, 615, 625 |
| MspR9I | CCNGG | 5 cut(s) | 66, 145, 330, 626, 915 |
| MvaI | CCWGG | 1 cut(s) | 915 |
| MvnI | CGCG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 308, 635, 670 |
| NciI | CCSGG | 4 cut(s) | 66, 145, 330, 626 |
| NdeII | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| NlaIII | CATG | 7 cut(s) | 121, 166, 182, 238, 364, 469, 595 |
| NmuCI | GTSAC | 3 cut(s) | 200, 720, 893 |
| PagI | TCATGA | 1 cut(s) | 117 |
| PceI | AGGCCT | 2 cut(s) | 323, 866 |
| PdmI | GAANNNNTTC | 3 cut(s) | 128, 337, 833 |
| PflFI | GACNNNGTC | 1 cut(s) | 461 |
| PfoI | TCCNGGA | 1 cut(s) | 328 |
| PkrI | GCNGC | 1 cut(s) | 310 |
| PleI | GAGTC | 1 cut(s) | 156 |
| PpsI | GAGTC | 1 cut(s) | 156 |
| Psp1406I | AACGTT | 1 cut(s) | 699 |
| Psp6I | CCWGG | 1 cut(s) | 913 |
| PspGI | CCWGG | 1 cut(s) | 913 |
| PspPI | GGNCC | 3 cut(s) | 395, 622, 691 |
| PstNI | CAGNNNCTG | 1 cut(s) | 635 |
| PsuI | RGATCY | 2 cut(s) | 139, 278 |
| PsyI | GACNNNGTC | 1 cut(s) | 461 |
| RsaI | GTAC | 2 cut(s) | 605, 746 |
| RsaNI | GTAC | 2 cut(s) | 604, 745 |
| RseI | CAYNNNNRTG | 1 cut(s) | 359 |
| SaqAI | TTAA | 4 cut(s) | 192, 843, 884, 945 |
| SatI | GCNGC | 1 cut(s) | 309 |
| Sau3AI | GATC | 5 cut(s) | 139, 278, 520, 787, 907 |
| Sau96I | GGNCC | 3 cut(s) | 395, 622, 691 |
| ScaI | AGTACT | 1 cut(s) | 746 |
| SchI | GAGTC | 1 cut(s) | 157 |
| ScrFI | CCNGG | 5 cut(s) | 66, 145, 330, 626, 915 |
| SduI | GDGCHC | 2 cut(s) | 89, 557 |
| SfaNI | GCATC | 2 cut(s) | 364, 706 |
| SinI | GGWCC | 2 cut(s) | 395, 691 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 359 |
| Sse9I | AATT | 7 cut(s) | 173, 268, 333, 515, 781, 931, 946 |
| SseBI | AGGCCT | 2 cut(s) | 323, 866 |
| SsiI | CCGC | 2 cut(s) | 42, 48 |
| SspMI | CTAG | 3 cut(s) | 239, 369, 816 |
| StuI | AGGCCT | 2 cut(s) | 323, 866 |
| StyD4I | CCNGG | 5 cut(s) | 64, 143, 328, 624, 913 |
| StyI | CCWWGG | 3 cut(s) | 303, 312, 847 |
| TaaI | ACNGT | 1 cut(s) | 706 |
| TaiI | ACGT | 2 cut(s) | 86, 702 |
| TaqI | TCGA | 1 cut(s) | 519 |
| TasI | AATT | 7 cut(s) | 173, 268, 333, 515, 781, 931, 946 |
| TatI | WGTACW | 2 cut(s) | 603, 744 |
| Tru1I | TTAA | 4 cut(s) | 192, 843, 884, 945 |
| Tru9I | TTAA | 4 cut(s) | 192, 843, 884, 945 |
| TseFI | GTSAC | 3 cut(s) | 200, 720, 893 |
| TseI | GCWGC | 1 cut(s) | 308 |
| Tsp45I | GTSAC | 3 cut(s) | 200, 720, 893 |
| TspDTI | ATGAA | 3 cut(s) | 134, 300, 312 |
| TspGWI | ACGGA | 1 cut(s) | 577 |
| Tth111I | GACNNNGTC | 1 cut(s) | 461 |
| VpaK11BI | GGWCC | 2 cut(s) | 395, 691 |
| XapI | RAATTY | 3 cut(s) | 268, 515, 781 |
| XbaI | TCTAGA | 1 cut(s) | 368 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 310 |
| XmnI | GAANNNNTTC | 3 cut(s) | 128, 337, 833 |
| XspI | CTAG | 3 cut(s) | 239, 369, 816 |
| ZrmI | AGTACT | 1 cut(s) | 746 |