Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22420 |
| fragaria_vesca | FvH4_1g20350 FvH4_1g20360 FvH4_1g20360 |
| malus_domestica | MD01G1034400.v1.1 MD01G1034500.v1.1 MD01G1034900.v1.1 MD15G1321200.v1.1 MD15G1321300.v1.1 MD15G1321400.v1.1 |
| prunus_persica | Prupe.6G191800_v2.0.a1 Prupe.6G191900_v2.0.a1 Prupe.6G192000_v2.0.a1 |
| pyrus_communis | pycom01g06150 pycom01g06160 pycom01g06190 pycom15g28200 pycom15g28210 |
| rosa_chinensis | RchiOBHm_Chr2g0112481 RchiOBHm_Chr2g0112491 |
| rosa_laevigata | RLG00000017984 RLG00000017985 |
| rosa_multiflora | Rmu_co8298115.1_g000001 Rmu_co8310909.1_g000001 Rmu_sc0013522.1_g000001 Rmu_sc0026466.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131380 Rroxscaffold_2G00131390 |
| rosa_rugosa | Rorug02G0181300 Rorug02G0181300 |
| rosa_samantha | Rh2AG234300 Rh2AG234400 Rh2BG247900 Rh2BG248000 Rh2CG238900 Rh2CG239000 Rh2DG241900 Rh2DG242000 |
| rosa_wichuraiana | Rw2G018150 Rw2G018160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 5 cut(s) | 97, 161, 174, 330, 433 |
| AcsI | RAATTY | 2 cut(s) | 50, 316 |
| AfaI | GTAC | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 306, 396 |
| AgsI | TTSAA | 4 cut(s) | 55, 179, 220, 286 |
| AjnI | CCWGG | 1 cut(s) | 448 |
| AluBI | AGCT | 3 cut(s) | 110, 199, 208 |
| AluI | AGCT | 3 cut(s) | 110, 199, 208 |
| Alw26I | GTCTC | 1 cut(s) | 237 |
| AlwI | GGATC | 5 cut(s) | 97, 161, 174, 330, 433 |
| AoxI | GGCC | 2 cut(s) | 161, 399 |
| ApoI | RAATTY | 2 cut(s) | 50, 316 |
| AspS9I | GGNCC | 2 cut(s) | 226, 399 |
| AsuHPI | GGTGA | 2 cut(s) | 440, 469 |
| AvaII | GGWCC | 1 cut(s) | 226 |
| BamHI | GGATCC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 131 |
| BciT130I | CCWGG | 1 cut(s) | 450 |
| BcoDI | GTCTC | 1 cut(s) | 237 |
| BfaI | CTAG | 2 cut(s) | 200, 351 |
| BglII | AGATCT | 1 cut(s) | 14 |
| BmcAI | AGTACT | 1 cut(s) | 281 |
| Bme1390I | CCNGG | 1 cut(s) | 450 |
| Bme18I | GGWCC | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 2 cut(s) | 226, 399 |
| BmiI | GGNNCC | 2 cut(s) | 168, 388 |
| BmrFI | CCNGG | 1 cut(s) | 450 |
| BmsI | GCATC | 1 cut(s) | 241 |
| BsaI | GGTCTC | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 2 cut(s) | 382, 449 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 306, 396 |
| Bse1I | ACTGG | 2 cut(s) | 160, 277 |
| BseBI | CCWGG | 1 cut(s) | 450 |
| BseDI | CCNNGG | 2 cut(s) | 382, 449 |
| BseGI | GGATG | 1 cut(s) | 420 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 306, 396 |
| BseNI | ACTGG | 2 cut(s) | 160, 277 |
| BshFI | GGCC | 2 cut(s) | 163, 401 |
| BsiSI | CCGG | 3 cut(s) | 164, 240, 300 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 306, 396 |
| BsmAI | GTCTC | 1 cut(s) | 237 |
| BsnI | GGCC | 2 cut(s) | 163, 401 |
| Bso31I | GGTCTC | 1 cut(s) | 237 |
| Bsp143I | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| BspANI | GGCC | 2 cut(s) | 163, 401 |
| BspLI | GGNNCC | 2 cut(s) | 168, 388 |
| BspPI | GGATC | 5 cut(s) | 97, 161, 174, 330, 433 |
| BspTNI | GGTCTC | 1 cut(s) | 237 |
| BsrI | ACTGG | 2 cut(s) | 160, 277 |
| BssECI | CCNNGG | 2 cut(s) | 382, 449 |
| BssMI | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| BssT1I | CCWWGG | 1 cut(s) | 382 |
| Bst2UI | CCWGG | 1 cut(s) | 450 |
| BstC8I | GCNNGC | 1 cut(s) | 161 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 394 |
| BstF5I | GGATG | 1 cut(s) | 420 |
| BstKTI | GATC | 6 cut(s) | 17, 40, 92, 169, 325, 441 |
| BstMAI | GTCTC | 1 cut(s) | 237 |
| BstMBI | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 205, 442 |
| BstNI | CCWGG | 1 cut(s) | 450 |
| BstSCI | CCNGG | 1 cut(s) | 448 |
| BstX2I | RGATCY | 3 cut(s) | 14, 166, 438 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 449 |
| BstYI | RGATCY | 3 cut(s) | 14, 166, 438 |
| BsuRI | GGCC | 2 cut(s) | 163, 401 |
| BtsCI | GGATG | 1 cut(s) | 420 |
| BtsIMutI | CAGTG | 2 cut(s) | 153, 267 |
| Cac8I | GCNNGC | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 2 cut(s) | 226, 399 |
| Csp6I | GTAC | 1 cut(s) | 280 |
| CviAII | CATG | 2 cut(s) | 73, 127 |
| CviJI | RGCY | 6 cut(s) | 110, 136, 163, 199, 208, 401 |
| CviKI_1 | RGCY | 6 cut(s) | 110, 136, 163, 199, 208, 401 |
| CviQI | GTAC | 1 cut(s) | 280 |
| DpnI | GATC | 6 cut(s) | 16, 39, 91, 168, 324, 440 |
| DpnII | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| Eco130I | CCWWGG | 1 cut(s) | 382 |
| Eco31I | GGTCTC | 1 cut(s) | 237 |
| Eco47I | GGWCC | 1 cut(s) | 226 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 394 |
| EcoO109I | RGGNCCY | 1 cut(s) | 399 |
| EcoRI | GAATTC | 1 cut(s) | 316 |
| EcoRII | CCWGG | 1 cut(s) | 448 |
| EcoT14I | CCWWGG | 1 cut(s) | 382 |
| EcoT22I | ATGCAT | 1 cut(s) | 487 |
| ErhI | CCWWGG | 1 cut(s) | 382 |
| FaeI | CATG | 2 cut(s) | 76, 130 |
| FaiI | YATR | 3 cut(s) | 74, 128, 377 |
| FatI | CATG | 2 cut(s) | 72, 126 |
| FokI | GGATG | 1 cut(s) | 427 |
| FspBI | CTAG | 2 cut(s) | 200, 351 |
| HaeIII | GGCC | 2 cut(s) | 163, 401 |
| HapII | CCGG | 3 cut(s) | 164, 240, 300 |
| Hin1II | CATG | 2 cut(s) | 76, 130 |
| HindIII | AAGCTT | 1 cut(s) | 206 |
| HpaII | CCGG | 3 cut(s) | 164, 240, 300 |
| HphI | GGTGA | 2 cut(s) | 440, 469 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 2 cut(s) | 315, 322 |
| Hpy188III | TCNNGA | 1 cut(s) | 87 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| HpyAV | CCTTC | 1 cut(s) | 456 |
| HpyCH4IV | ACGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 5 cut(s) | 23, 80, 254, 436, 485 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 205, 442 |
| HpySE526I | ACGT | 1 cut(s) | 234 |
| Hsp92II | CATG | 2 cut(s) | 76, 130 |
| Kzo9I | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| LweI | GCATC | 1 cut(s) | 241 |
| MaeI | CTAG | 2 cut(s) | 200, 351 |
| MaeII | ACGT | 1 cut(s) | 234 |
| MaeIII | GTNAC | 2 cut(s) | 235, 428 |
| MalI | GATC | 6 cut(s) | 16, 39, 91, 168, 324, 440 |
| MboI | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| MflI | RGATCY | 3 cut(s) | 14, 166, 438 |
| MluCI | AATT | 4 cut(s) | 50, 316, 422, 466 |
| MnlI | CCTC | 4 cut(s) | 299, 357, 403, 448 |
| Mph1103I | ATGCAT | 1 cut(s) | 487 |
| MspI | CCGG | 3 cut(s) | 164, 240, 300 |
| MspR9I | CCNGG | 1 cut(s) | 450 |
| MvaI | CCWGG | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 205, 442 |
| NdeII | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| NlaIII | CATG | 2 cut(s) | 76, 130 |
| NlaIV | GGNNCC | 2 cut(s) | 168, 388 |
| NmuCI | GTSAC | 2 cut(s) | 235, 428 |
| NsiI | ATGCAT | 1 cut(s) | 487 |
| Psp6I | CCWGG | 1 cut(s) | 448 |
| PspGI | CCWGG | 1 cut(s) | 448 |
| PspN4I | GGNNCC | 2 cut(s) | 168, 388 |
| PspPI | GGNCC | 2 cut(s) | 226, 399 |
| PsuI | RGATCY | 3 cut(s) | 14, 166, 438 |
| RsaI | GTAC | 1 cut(s) | 281 |
| RsaNI | GTAC | 1 cut(s) | 280 |
| Sau3AI | GATC | 6 cut(s) | 14, 37, 89, 166, 322, 438 |
| Sau96I | GGNCC | 2 cut(s) | 226, 399 |
| ScaI | AGTACT | 1 cut(s) | 281 |
| ScrFI | CCNGG | 1 cut(s) | 450 |
| SetI | ASST | 9 cut(s) | 29, 112, 201, 210, 237, 249, 392, 451, 459 |
| SfaNI | GCATC | 1 cut(s) | 241 |
| SinI | GGWCC | 1 cut(s) | 226 |
| Sse9I | AATT | 4 cut(s) | 50, 316, 422, 466 |
| SspMI | CTAG | 2 cut(s) | 200, 351 |
| StyD4I | CCNGG | 1 cut(s) | 448 |
| StyI | CCWWGG | 1 cut(s) | 382 |
| TaiI | ACGT | 1 cut(s) | 237 |
| TasI | AATT | 4 cut(s) | 50, 316, 422, 466 |
| TatI | WGTACW | 1 cut(s) | 279 |
| TscAI | CASTG | 2 cut(s) | 160, 267 |
| TseFI | GTSAC | 2 cut(s) | 235, 428 |
| Tsp45I | GTSAC | 2 cut(s) | 235, 428 |
| TspRI | CASTG | 2 cut(s) | 160, 267 |
| VpaK11BI | GGWCC | 1 cut(s) | 226 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 394 |
| XapI | RAATTY | 2 cut(s) | 50, 316 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 152 |
| XspI | CTAG | 2 cut(s) | 200, 351 |
| ZrmI | AGTACT | 1 cut(s) | 281 |
| Zsp2I | ATGCAT | 1 cut(s) | 487 |