Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002664

Physical Location & Seq

Genomic Coordinates Forward (+)

19923796 .. 19926200

Gene Structure 2405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G191800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGTCTCCTCTGTTTCCACTCATCCTCCTTCACATAACCGTGGCCGCCGCGCAACTCCGGCCCGGCCATTACTTGAAAACGTGCCCGGGAGCTGAATTTGTGGTCCGGGATGTCATGGAGAAGGCTCTGATTAGAGAGCCAAGGAGCCTTGCCTCTGTCATGCGCTTCCAATTCCATGACTGCTTTGTTAATGGTTGTGATGCTTCTATGTTACTTGATGACACAACCACCATGCTCGGAGAAAAACTTTCCCTTTCAAATATAAATTCACTAAGATCTTATGAAGTTGTTGATGAAGCCAAGGAAGCCTTGGAGAAGGTCTGCCCTGGAGTTGTTTCATGCGCAGATATCATAATCATGGCCTCTAGAGATGCTGTTGCCCTGACTGGAGGACCCAATTGGGAAGTGAAGCTAGGAAGATTGGATAGCTTAACAGCTAGCCAAGAAGCCTCAGACAACATTATGCCAAGTCCAAGAGCCAATGCAAGCCTTCTCATTGACCTGTTTGGAAAATTTAATCTATCTGTCAAGGACCTCGTTGCCCTTTCTGGGTCACACTCCATTGGCCAAGGTCGGTGCTTTTCCATCATGTTTCGGCTGTACAACCAATCAGGCACAGGCAGGCCAGACCCGGCCTTGGAACCGAAGTTTAGAGAAAAGCTAAACAAGCTTTGCCCGCTAAACGTGGACCAGAATGTGACCGGAGACCTTGATGCTACACCTTTTGTATTTGATAACCAGTACTTCAAGGACTTGGTTGCAGGGAGAGGGTTTCTGAATTCAGATCAAACACTTTTCACATTTCCACAAACAAGGAAATTTGTGAAGCAGTTTAGCATTAACCAAAGCGAATTTTTCGAGGCCTTTGTTGAAGGGATGATAAAGATGGGTGACTTGCAGTTGGAGCAGCCTGGGGAGATAAGAAGAAATTGTAGGGTGGCCAACAGTCGTTCTGTCAACACATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009505 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009987 GO:0010228 GO:0019438 GO:0019748 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0071944 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

323

Amino Acids

35.72

Weight (kDa)

5.89

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22420
fragaria_vesca	FvH4_1g20350 FvH4_1g20360 FvH4_1g20360
malus_domestica	MD01G1034400.v1.1 MD01G1034500.v1.1 MD01G1034900.v1.1 MD15G1321200.v1.1 MD15G1321300.v1.1 MD15G1321400.v1.1
prunus_persica	Prupe.6G191800_v2.0.a1 Prupe.6G191900_v2.0.a1 Prupe.6G192000_v2.0.a1
pyrus_communis	pycom01g06150 pycom01g06160 pycom01g06190 pycom15g28200 pycom15g28210
rosa_chinensis	RchiOBHm_Chr2g0112481 RchiOBHm_Chr2g0112491
rosa_laevigata	RLG00000017984 RLG00000017985
rosa_multiflora	Rmu_co8298115.1_g000001 Rmu_co8310909.1_g000001 Rmu_sc0013522.1_g000001 Rmu_sc0026466.1_g000001
rosa_roxburghii	Rroxscaffold_2G00131380 Rroxscaffold_2G00131390
rosa_rugosa	Rorug02G0181300 Rorug02G0181300
rosa_samantha	Rh2AG234300 Rh2AG234400 Rh2BG247900 Rh2BG248000 Rh2CG238900 Rh2CG239000 Rh2DG241900 Rh2DG242000
rosa_wichuraiana	Rw2G018150 Rw2G018160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	343
AccII	CGCG	1 cut(s)	50
AciI	CCGC	3 cut(s)	45, 48, 677
AcoI	YGGCCR	4 cut(s)	42, 64, 565, 939
AcsI	RAATTY	6 cut(s)	95, 265, 512, 778, 818, 851
AfaI	GTAC	2 cut(s)	602, 743
AfiI	CCNNNNNNNGG	2 cut(s)	549, 637
AgsI	TTSAA	4 cut(s)	76, 258, 748, 872
AjnI	CCWGG	2 cut(s)	325, 910
AluBI	AGCT	6 cut(s)	92, 412, 429, 437, 661, 670
AluI	AGCT	6 cut(s)	92, 412, 429, 437, 661, 670
Alw26I	GTCTC	2 cut(s)	9, 699
Ama87I	CYCGRG	1 cut(s)	85
AoxI	GGCC	9 cut(s)	42, 59, 64, 360, 565, 623, 633, 861, 939
ApeKI	GCWGC	1 cut(s)	907
ApoI	RAATTY	6 cut(s)	95, 265, 512, 778, 818, 851
AspLEI	GCGC	3 cut(s)	52, 165, 344
AspS9I	GGNCC	5 cut(s)	60, 103, 392, 532, 688
AsuC2I	CCSGG	5 cut(s)	63, 86, 87, 107, 632
AsuHPI	GGTGA	1 cut(s)	902
AsuNHI	GCTAGC	1 cut(s)	437
AvaI	CYCGRG	1 cut(s)	85
AvaII	GGWCC	4 cut(s)	103, 392, 532, 688
BaeGI	GKGCMC	1 cut(s)	86
BalI	TGGCCA	2 cut(s)	567, 941
BbvI	GCAGC	1 cut(s)	919
BccI	CCATC	2 cut(s)	593, 880
BciT130I	CCWGG	2 cut(s)	327, 912
BcnI	CCSGG	5 cut(s)	63, 86, 87, 107, 632
BcoDI	GTCTC	2 cut(s)	9, 699
BfaI	CTAG	3 cut(s)	366, 413, 438
BglII	AGATCT	1 cut(s)	275
BisI	GCNGC	3 cut(s)	45, 48, 908
BlsI	GCNGC	3 cut(s)	46, 49, 909
BmcAI	AGTACT	1 cut(s)	743
Bme1390I	CCNGG	7 cut(s)	63, 86, 87, 107, 327, 632, 912
Bme18I	GGWCC	4 cut(s)	103, 392, 532, 688
BmeT110I	CYCGRG	1 cut(s)	85
BmgT120I	GGNCC	5 cut(s)	60, 103, 392, 532, 688
BmiI	GGNNCC	3 cut(s)	146, 394, 642
BmrFI	CCNGG	7 cut(s)	63, 86, 87, 107, 327, 632, 912
BmsI	GCATC	3 cut(s)	190, 361, 703
BmtI	GCTAGC	1 cut(s)	441
BpmI	CTGGAG	2 cut(s)	348, 408
BpuMI	CCSGG	5 cut(s)	63, 86, 87, 107, 632
BsaI	GGTCTC	1 cut(s)	699
BsaJI	CCNNGG	9 cut(s)	39, 85, 140, 300, 309, 325, 568, 636, 911
BsaWI	WCCGGW	1 cut(s)	701
BsaXI	ACNNNNNCTCC	2 cut(s)	9, 39
Bsc4I	CCNNNNNNNGG	2 cut(s)	549, 637
Bse1I	ACTGG	2 cut(s)	391, 739
BseBI	CCWGG	2 cut(s)	327, 912
BseDI	CCNNGG	9 cut(s)	39, 85, 140, 300, 309, 325, 568, 636, 911
BseGI	GGATG	3 cut(s)	21, 115, 882
BseLI	CCNNNNNNNGG	2 cut(s)	549, 637
BseMII	CTCAG	1 cut(s)	465
BseNI	ACTGG	2 cut(s)	391, 739
BseSI	GKGCMC	1 cut(s)	86
BseXI	GCAGC	1 cut(s)	919
Bsh1236I	CGCG	1 cut(s)	50
BshFI	GGCC	9 cut(s)	44, 61, 66, 362, 567, 625, 635, 863, 941
BsiHKCI	CYCGRG	1 cut(s)	85
BsiSI	CCGG	6 cut(s)	58, 63, 86, 106, 632, 702
BslI	CCNNNNNNNGG	2 cut(s)	549, 637
BsmAI	GTCTC	2 cut(s)	9, 699
BsnI	GGCC	9 cut(s)	44, 61, 66, 362, 567, 625, 635, 863, 941
Bso31I	GGTCTC	1 cut(s)	699
BsoBI	CYCGRG	1 cut(s)	85
Bsp1286I	GDGCHC	1 cut(s)	86
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	2 cut(s)	275, 784
BspACI	CCGC	3 cut(s)	45, 48, 677
BspANI	GGCC	9 cut(s)	44, 61, 66, 362, 567, 625, 635, 863, 941
BspCNI	CTCAG	1 cut(s)	464
BspFNI	CGCG	1 cut(s)	50
BspLI	GGNNCC	3 cut(s)	146, 394, 642
BspOI	GCTAGC	1 cut(s)	441
BspTNI	GGTCTC	1 cut(s)	699
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	2 cut(s)	391, 739
BssECI	CCNNGG	9 cut(s)	39, 85, 140, 300, 309, 325, 568, 636, 911
BssMI	GATC	2 cut(s)	275, 784
BssT1I	CCWWGG	5 cut(s)	140, 300, 309, 568, 636
Bst2UI	CCWGG	2 cut(s)	327, 912
Bst4CI	ACNGT	2 cut(s)	40, 947
BstAUI	TGTACA	1 cut(s)	600
BstC8I	GCNNGC	4 cut(s)	439, 487, 623, 677
BstDEI	CTNAG	2 cut(s)	272, 451
BstDSI	CCRYGG	1 cut(s)	39
BstF5I	GGATG	3 cut(s)	21, 115, 882
BstFNI	CGCG	1 cut(s)	50
BstHHI	GCGC	3 cut(s)	52, 165, 344
BstKTI	GATC	2 cut(s)	278, 787
BstMAI	GTCTC	2 cut(s)	9, 699
BstMBI	GATC	2 cut(s)	275, 784
BstMWI	GCNNNNNNNGC	5 cut(s)	58, 305, 667, 676, 904
BstNI	CCWGG	2 cut(s)	327, 912
BstSCI	CCNGG	7 cut(s)	61, 84, 85, 105, 325, 630, 910
BstSLI	GKGCMC	1 cut(s)	86
BstUI	CGCG	1 cut(s)	50
BstV1I	GCAGC	1 cut(s)	919
BstX2I	RGATCY	1 cut(s)	275
BstYI	RGATCY	1 cut(s)	275
BsuRI	GGCC	9 cut(s)	44, 61, 66, 362, 567, 625, 635, 863, 941
BtgI	CCRYGG	1 cut(s)	39
BtsCI	GGATG	3 cut(s)	21, 115, 882
Cac8I	GCNNGC	4 cut(s)	439, 487, 623, 677
CfoI	GCGC	3 cut(s)	52, 165, 344
Cfr13I	GGNCC	5 cut(s)	60, 103, 392, 532, 688
Cfr9I	CCCGGG	1 cut(s)	85
Csp6I	GTAC	2 cut(s)	601, 742
CviAII	CATG	7 cut(s)	115, 160, 176, 232, 339, 358, 589
CviQI	GTAC	2 cut(s)	601, 742
DdeI	CTNAG	2 cut(s)	272, 451
DpnI	GATC	2 cut(s)	277, 786
DpnII	GATC	2 cut(s)	275, 784
EaeI	YGGCCR	4 cut(s)	42, 64, 565, 939
Eco130I	CCWWGG	5 cut(s)	140, 300, 309, 568, 636
Eco147I	AGGCCT	1 cut(s)	863
Eco31I	GGTCTC	1 cut(s)	699
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	4 cut(s)	103, 392, 532, 688
Eco88I	CYCGRG	1 cut(s)	85
EcoO109I	RGGNCCY	2 cut(s)	392, 532
EcoRI	GAATTC	1 cut(s)	778
EcoRII	CCWGG	2 cut(s)	325, 910
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	5 cut(s)	140, 300, 309, 568, 636
ErhI	CCWWGG	5 cut(s)	140, 300, 309, 568, 636
FaeI	CATG	7 cut(s)	118, 163, 179, 235, 342, 361, 592
FalI	AAGNNNNNCTT	2 cut(s)	293, 325
FatI	CATG	7 cut(s)	114, 159, 175, 231, 338, 357, 588
FauI	CCCGC	1 cut(s)	684
Fnu4HI	GCNGC	3 cut(s)	45, 48, 908
FokI	GGATG	3 cut(s)	8, 122, 889
Fsp4HI	GCNGC	3 cut(s)	45, 48, 908
FspBI	CTAG	3 cut(s)	366, 413, 438
FspI	TGCGCA	1 cut(s)	343
GlaI	GCGC	3 cut(s)	51, 164, 343
GluI	GCNGC	3 cut(s)	45, 48, 908
GsuI	CTGGAG	2 cut(s)	348, 408
HaeIII	GGCC	9 cut(s)	44, 61, 66, 362, 567, 625, 635, 863, 941
HapII	CCGG	6 cut(s)	58, 63, 86, 106, 632, 702
HhaI	GCGC	3 cut(s)	52, 165, 344
Hin1II	CATG	7 cut(s)	118, 163, 179, 235, 342, 361, 592
Hin6I	GCGC	3 cut(s)	50, 163, 342
HinP1I	GCGC	3 cut(s)	50, 163, 342
HincII	GTYRAC	1 cut(s)	958
HindII	GTYRAC	1 cut(s)	958
HindIII	AAGCTT	1 cut(s)	668
HpaII	CCGG	6 cut(s)	58, 63, 86, 106, 632, 702
HphI	GGTGA	1 cut(s)	902
Hpy166II	GTNNAC	2 cut(s)	688, 958
Hpy188I	TCNGA	5 cut(s)	129, 239, 454, 777, 784
Hpy188III	TCNNGA	1 cut(s)	366
Hpy8I	GTNNAC	2 cut(s)	688, 958
HpyAV	CCTTC	5 cut(s)	38, 115, 310, 500, 866
HpyCH4III	ACNGT	2 cut(s)	40, 947
HpyCH4IV	ACGT	2 cut(s)	80, 684
HpyCH4V	TGCA	3 cut(s)	485, 761, 898
HpyF10VI	GCNNNNNNNGC	5 cut(s)	58, 305, 667, 676, 904
HpyF3I	CTNAG	2 cut(s)	272, 451
HpySE526I	ACGT	2 cut(s)	80, 684
Hsp92II	CATG	7 cut(s)	118, 163, 179, 235, 342, 361, 592
HspAI	GCGC	3 cut(s)	50, 163, 342
Kzo9I	GATC	2 cut(s)	275, 784
LmnI	GCTCC	3 cut(s)	89, 144, 904
Lsp1109I	GCAGC	1 cut(s)	919
LweI	GCATC	3 cut(s)	190, 361, 703
MaeI	CTAG	3 cut(s)	366, 413, 438
MaeII	ACGT	2 cut(s)	80, 684
MaeIII	GTNAC	4 cut(s)	210, 552, 697, 890
MalI	GATC	2 cut(s)	277, 786
MboI	GATC	2 cut(s)	275, 784
MboII	GAAGA	2 cut(s)	429, 936
MfeI	CAATTG	1 cut(s)	397
MflI	RGATCY	1 cut(s)	275
MhlI	GDGCHC	1 cut(s)	86
MlsI	TGGCCA	2 cut(s)	567, 941
MluCI	AATT	9 cut(s)	95, 170, 265, 397, 512, 778, 818, 851, 928
MluNI	TGGCCA	2 cut(s)	567, 941
MmeI	TCCRAC	1 cut(s)	882
MnlI	CCTC	9 cut(s)	18, 35, 163, 373, 383, 460, 545, 761, 853
Mox20I	TGGCCA	2 cut(s)	567, 941
MscI	TGGCCA	2 cut(s)	567, 941
MseI	TTAA	4 cut(s)	189, 431, 516, 840
MslI	CAYNNNNRTG	2 cut(s)	38, 356
Msp20I	TGGCCA	2 cut(s)	567, 941
MspI	CCGG	6 cut(s)	58, 63, 86, 106, 632, 702
MspR9I	CCNGG	7 cut(s)	63, 86, 87, 107, 327, 632, 912
MunI	CAATTG	1 cut(s)	397
MvaI	CCWGG	2 cut(s)	327, 912
MvnI	CGCG	1 cut(s)	50
MwoI	GCNNNNNNNGC	5 cut(s)	58, 305, 667, 676, 904
NciI	CCSGG	5 cut(s)	63, 86, 87, 107, 632
NdeII	GATC	2 cut(s)	275, 784
NheI	GCTAGC	1 cut(s)	437
NlaIII	CATG	7 cut(s)	118, 163, 179, 235, 342, 361, 592
NlaIV	GGNNCC	3 cut(s)	146, 394, 642
NmuCI	GTSAC	3 cut(s)	552, 697, 890
NsbI	TGCGCA	1 cut(s)	343
PceI	AGGCCT	1 cut(s)	863
PfoI	TCCNGGA	1 cut(s)	105
PkrI	GCNGC	3 cut(s)	46, 49, 909
PpuMI	RGGWCCY	2 cut(s)	392, 532
Psp5II	RGGWCCY	2 cut(s)	392, 532
Psp6I	CCWGG	2 cut(s)	325, 910
PspGI	CCWGG	2 cut(s)	325, 910
PspN4I	GGNNCC	3 cut(s)	146, 394, 642
PspPI	GGNCC	5 cut(s)	60, 103, 392, 532, 688
PspPPI	RGGWCCY	2 cut(s)	392, 532
PsuI	RGATCY	1 cut(s)	275
RsaI	GTAC	2 cut(s)	602, 743
RsaNI	GTAC	2 cut(s)	601, 742
RseI	CAYNNNNRTG	2 cut(s)	38, 356
SaqAI	TTAA	4 cut(s)	189, 431, 516, 840
SatI	GCNGC	3 cut(s)	45, 48, 908
Sau3AI	GATC	2 cut(s)	275, 784
Sau96I	GGNCC	5 cut(s)	60, 103, 392, 532, 688
ScaI	AGTACT	1 cut(s)	743
ScrFI	CCNGG	7 cut(s)	63, 86, 87, 107, 327, 632, 912
SduI	GDGCHC	1 cut(s)	86
SfaNI	GCATC	3 cut(s)	190, 361, 703
SinI	GGWCC	4 cut(s)	103, 392, 532, 688
SmaI	CCCGGG	1 cut(s)	87
SmiMI	CAYNNNNRTG	2 cut(s)	38, 356
Sse9I	AATT	9 cut(s)	95, 170, 265, 397, 512, 778, 818, 851, 928
SseBI	AGGCCT	1 cut(s)	863
SsiI	CCGC	3 cut(s)	45, 48, 677
SspMI	CTAG	3 cut(s)	366, 413, 438
StuI	AGGCCT	1 cut(s)	863
StyD4I	CCNGG	7 cut(s)	61, 84, 85, 105, 325, 630, 910
StyI	CCWWGG	5 cut(s)	140, 300, 309, 568, 636
TaaI	ACNGT	2 cut(s)	40, 947
TaiI	ACGT	2 cut(s)	83, 687
TaqI	TCGA	1 cut(s)	858
TasI	AATT	9 cut(s)	95, 170, 265, 397, 512, 778, 818, 851, 928
TatI	WGTACW	2 cut(s)	600, 741
TauI	GCSGC	2 cut(s)	47, 50
Tru1I	TTAA	4 cut(s)	189, 431, 516, 840
Tru9I	TTAA	4 cut(s)	189, 431, 516, 840
TseFI	GTSAC	3 cut(s)	552, 697, 890
TseI	GCWGC	1 cut(s)	907
Tsp45I	GTSAC	3 cut(s)	552, 697, 890
TspDTI	ATGAA	3 cut(s)	297, 309, 327
TspMI	CCCGGG	1 cut(s)	85
VpaK11BI	GGWCC	4 cut(s)	103, 392, 532, 688
XapI	RAATTY	6 cut(s)	95, 265, 512, 778, 818, 851
XbaI	TCTAGA	1 cut(s)	365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	307
XmaI	CCCGGG	1 cut(s)	85
XspI	CTAG	3 cut(s)	366, 413, 438
ZrmI	AGTACT	1 cut(s)	743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.