MD15G1321300.v1.1

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
33511841 .. 33513542
1702 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1321300.v1.1.491

Sequence Viewer

Length: 1083 bp
ATGCATATGATGCAGCCCACGAGTTTAAAAAGCACCCCACCCCCCACACAACTGAACCAATTACCCACCTGCCTCCAGTCACTAGTGACTCGAGAATTCTCAATGGCTCTTCTCTTTTCACTCTTCATCCTACTCATAATAACCGGGGCCACAGCGCAACTCCGCCCTGGTTATTACTCGGGAACCTGCCCGAAAGCCGAATCCATTGTCCAAGATGTCATGAAGGCAGCTCTGATTCGAGAGCCACGGAGCCTTGCCTCGGTCATGCGCTTACAGTTCCATGATTGTTTTGTCAATGGTTGTGATGCTTCATTGTTGCTTGACGACACACCAACCATGCTAGGAGAAAAACTAGCCCTTGCAAACATTAATTCACTGAGATCTTACGAAGTTGTTGACGAAGCGAAAGAAGCCTTGGAGAAGGTGTGCCCGGGAGTTGTTTCTTGCGCAGACATTATAATCATGGCATCTAGAGATGCTGTTGCTCTGACAGGGGGGCCTTGTTGGGAAGTGAAGTTAGGAAGGTTGGATAGCTTAACAGCAAGCCAAGAAGCCTCAGACAACATTATGCCAAGTCCAAGATCCAATGCGACATTCCTCATTGACCTGTTTGCCAAATTTAATCTCTCTGTTAAAGACCTCGTTGCGCTTTCGGGTTCACACTCCATCGGCAAAGCTCGGTGCTTTTCCATCATGTTTCGGCTGTACAACCAATCTGGCAGTGGCCGGCCAGACCCTGCCATTGAACCAAAGTTTAGACAAAAGCTAGACAAGCTTTGCCCACTAGACGTGGACCAAAACGTTACAGGTGACCTAGATGCTACGCCTGTAGGCTTTGATAACCAGTACTTCAAGGACTTGGTTGCCGGGAGAGGTTTTCTCAACTCAGATCAAACGCTTTTCACCTTTCCGGAAACGAGGGGATTTGTGAAGCAGTTCAACATTGATGAAGGAAAATTTTTCAAGGCATTTGTGGATGGGATGATAAAGATGGGTGACTTGAAGGTGGATCAGCCTGGGGAAGTAAGAAAGAATTGCAGGGTGGTTAATAGTCATTCTTCTAATTTTCCCAATGAATTCTAG

Protein Analysis

361

Amino Acids

39.63

Weight (kDa)

5.89

Isoelectric Point (pI)

35.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 70 - 313 2.2e-75 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 458
AarI CACCTGC 1 cut(s) 77
Acc16I TGCGCA 1 cut(s) 448
Acc36I ACCTGC 2 cut(s) 77, 194
AccIII TCCGGA 1 cut(s) 910
AciI CCGC 1 cut(s) 163
AclI AACGTT 1 cut(s) 801
AclWI GGATC 2 cut(s) 576, 1017
AcoI YGGCCR 2 cut(s) 724, 728
AcsI RAATTY 4 cut(s) 95, 617, 956, 1076
AfaI GTAC 2 cut(s) 707, 848
AfiI CCNNNNNNNGG 1 cut(s) 259
AgsI TTSAA 5 cut(s) 746, 853, 940, 964, 1003
AhlI ACTAGT 1 cut(s) 82
AjiI CACGTC 1 cut(s) 790
AjnI CCWGG 2 cut(s) 166, 1015
AjuI GAANNNNNNNTTGG 4 cut(s) 398, 430, 578, 610
AluBI AGCT 5 cut(s) 230, 534, 677, 766, 775
AluI AGCT 5 cut(s) 230, 534, 677, 766, 775
AlwI GGATC 2 cut(s) 576, 1017
AlwNI CAGNNNCTG 1 cut(s) 737
Ama87I CYCGRG 3 cut(s) 90, 178, 430
Aor13HI TCCGGA 1 cut(s) 910
AoxI GGCC 4 cut(s) 147, 497, 724, 728
ApeKI GCWGC 2 cut(s) 13, 227
ApoI RAATTY 4 cut(s) 95, 617, 956, 1076
ArsI GACNNNNNNTTYG 2 cut(s) 192, 224
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 1 cut(s) 935
AspLEI GCGC 4 cut(s) 157, 270, 449, 649
AspS9I GGNCC 3 cut(s) 147, 497, 793
AsuC2I CCSGG 4 cut(s) 145, 431, 432, 868
AsuHPI GGTGA 3 cut(s) 821, 895, 1007
AvaI CYCGRG 3 cut(s) 90, 178, 430
AvaII GGWCC 1 cut(s) 793
BaeGI GKGCMC 1 cut(s) 431
BauI CACGAG 1 cut(s) 19
BbvI GCAGC 2 cut(s) 25, 239
BccI CCATC 4 cut(s) 674, 698, 971, 985
BciT130I CCWGG 2 cut(s) 168, 1017
BcnI CCSGG 4 cut(s) 145, 431, 432, 868
BcuI ACTAGT 1 cut(s) 82
BfaI CTAG 8 cut(s) 83, 341, 353, 471, 767, 785, 815, 1081
BfmI CTRYAG 1 cut(s) 828
BfuAI ACCTGC 2 cut(s) 77, 194
BglII AGATCT 1 cut(s) 380
BisI GCNGC 2 cut(s) 14, 228
BlsI GCNGC 2 cut(s) 15, 229
BmcAI AGTACT 1 cut(s) 848
Bme1390I CCNGG 6 cut(s) 145, 168, 431, 432, 868, 1017
Bme18I GGWCC 1 cut(s) 793
BmeT110I CYCGRG 3 cut(s) 90, 178, 430
BmgBI CACGTC 1 cut(s) 790
BmgT120I GGNCC 3 cut(s) 147, 497, 793
BmiI GGNNCC 4 cut(s) 148, 184, 251, 498
BmrFI CCNGG 6 cut(s) 145, 168, 431, 432, 868, 1017
BmsI GCATC 4 cut(s) 295, 466, 476, 808
BplI GAGNNNNNCTC 2 cut(s) 864, 896
BpmI CTGGAG 1 cut(s) 59
BpuMI CCSGG 4 cut(s) 145, 431, 432, 868
BsaJI CCNNGG 7 cut(s) 144, 166, 245, 258, 414, 430, 1016
BsaWI WCCGGW 1 cut(s) 910
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 1 cut(s) 259
Bse118I RCCGGY 1 cut(s) 726
Bse1I ACTGG 2 cut(s) 76, 844
BseAI TCCGGA 1 cut(s) 910
BseBI CCWGG 2 cut(s) 168, 1017
BseDI CCNNGG 7 cut(s) 144, 166, 245, 258, 414, 430, 1016
BseGI GGATG 3 cut(s) 126, 982, 987
BseLI CCNNNNNNNGG 1 cut(s) 259
BseMII CTCAG 3 cut(s) 368, 570, 900
BseNI ACTGG 2 cut(s) 76, 844
BseSI GKGCMC 1 cut(s) 431
BseXI GCAGC 2 cut(s) 25, 239
BshFI GGCC 4 cut(s) 149, 499, 726, 730
BsiHKCI CYCGRG 3 cut(s) 90, 178, 430
BsiSI CCGG 5 cut(s) 144, 431, 727, 867, 911
BslI CCNNNNNNNGG 1 cut(s) 259
BsnI GGCC 4 cut(s) 149, 499, 726, 730
BsoBI CYCGRG 3 cut(s) 90, 178, 430
Bsp1286I GDGCHC 1 cut(s) 431
Bsp13I TCCGGA 1 cut(s) 910
Bsp1407I TGTACA 1 cut(s) 705
Bsp143I GATC 4 cut(s) 380, 581, 889, 1009
BspACI CCGC 1 cut(s) 163
BspANI GGCC 4 cut(s) 149, 499, 726, 730
BspCNI CTCAG 3 cut(s) 369, 569, 899
BspEI TCCGGA 1 cut(s) 910
BspHI TCATGA 1 cut(s) 219
BspLI GGNNCC 4 cut(s) 148, 184, 251, 498
BspMI ACCTGC 2 cut(s) 77, 194
BspPI GGATC 2 cut(s) 576, 1017
BspQI GCTCTTC 1 cut(s) 114
BsrFI RCCGGY 1 cut(s) 726
BsrGI TGTACA 1 cut(s) 705
BsrI ACTGG 2 cut(s) 76, 844
BssAI RCCGGY 1 cut(s) 726
BssECI CCNNGG 7 cut(s) 144, 166, 245, 258, 414, 430, 1016
BssMI GATC 4 cut(s) 380, 581, 889, 1009
BssSI CACGAG 1 cut(s) 19
BssT1I CCWWGG 1 cut(s) 414
Bst2BI CACGAG 1 cut(s) 19
Bst2UI CCWGG 2 cut(s) 168, 1017
Bst4CI ACNGT 1 cut(s) 276
Bst6I CTCTTC 2 cut(s) 114, 128
BstAPI GCANNNNNTGC 1 cut(s) 10
BstAUI TGTACA 1 cut(s) 705
BstC8I GCNNGC 2 cut(s) 544, 728
BstDEI CTNAG 3 cut(s) 377, 556, 886
BstDSI CCRYGG 1 cut(s) 245
BstEII GGTNACC 1 cut(s) 809
BstF5I GGATG 3 cut(s) 126, 982, 987
BstHHI GCGC 4 cut(s) 157, 270, 449, 649
BstKTI GATC 4 cut(s) 383, 584, 892, 1012
BstMBI GATC 4 cut(s) 380, 581, 889, 1009
BstMWI GCNNNNNNNGC 3 cut(s) 10, 410, 772
BstNI CCWGG 2 cut(s) 168, 1017
BstPI GGTNACC 1 cut(s) 809
BstSCI CCNGG 6 cut(s) 143, 166, 429, 430, 866, 1015
BstSFI CTRYAG 1 cut(s) 828
BstSLI GKGCMC 1 cut(s) 431
BstV1I GCAGC 2 cut(s) 25, 239
BstX2I RGATCY 2 cut(s) 380, 581
BstYI RGATCY 2 cut(s) 380, 581
BsuRI GGCC 4 cut(s) 149, 499, 726, 730
BtgI CCRYGG 1 cut(s) 245
BtrI CACGTC 1 cut(s) 790
BtsCI GGATG 3 cut(s) 126, 982, 987
BtsI GCAGTG 1 cut(s) 727
BtsIMutI CAGTG 2 cut(s) 374, 727
BveI ACCTGC 2 cut(s) 77, 194
Cac8I GCNNGC 2 cut(s) 544, 728
CaiI CAGNNNCTG 1 cut(s) 737
CciI TCATGA 1 cut(s) 219
CfoI GCGC 4 cut(s) 157, 270, 449, 649
Cfr10I RCCGGY 1 cut(s) 726
Cfr13I GGNCC 3 cut(s) 147, 497, 793
Cfr9I CCCGGG 1 cut(s) 430
Csp6I GTAC 2 cut(s) 706, 847
CviAII CATG 6 cut(s) 220, 265, 281, 337, 463, 694
CviQI GTAC 2 cut(s) 706, 847
DdeI CTNAG 3 cut(s) 377, 556, 886
DpnI GATC 4 cut(s) 382, 583, 891, 1011
DpnII GATC 4 cut(s) 380, 581, 889, 1009
DraI TTTAAA 1 cut(s) 27
EaeI YGGCCR 2 cut(s) 724, 728
Eam1104I CTCTTC 2 cut(s) 114, 128
EarI CTCTTC 2 cut(s) 114, 128
EciI GGCGGA 1 cut(s) 152
Eco130I CCWWGG 1 cut(s) 414
Eco47I GGWCC 1 cut(s) 793
Eco88I CYCGRG 3 cut(s) 90, 178, 430
Eco91I GGTNACC 1 cut(s) 809
EcoO109I RGGNCCY 1 cut(s) 497
EcoO65I GGTNACC 1 cut(s) 809
EcoRI GAATTC 2 cut(s) 95, 1076
EcoRII CCWGG 2 cut(s) 166, 1015
EcoT14I CCWWGG 1 cut(s) 414
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 414
FaeI CATG 6 cut(s) 223, 268, 284, 340, 466, 697
FatI CATG 6 cut(s) 219, 264, 280, 336, 462, 693
FauNDI CATATG 1 cut(s) 6
Fnu4HI GCNGC 2 cut(s) 14, 228
FokI GGATG 3 cut(s) 113, 989, 994
FseI GGCCGGCC 1 cut(s) 730
Fsp4HI GCNGC 2 cut(s) 14, 228
FspBI CTAG 8 cut(s) 83, 341, 353, 471, 767, 785, 815, 1081
FspI TGCGCA 1 cut(s) 448
GlaI GCGC 4 cut(s) 156, 269, 448, 648
GluI GCNGC 2 cut(s) 14, 228
GsuI CTGGAG 1 cut(s) 59
HaeIII GGCC 4 cut(s) 149, 499, 726, 730
HapII CCGG 5 cut(s) 144, 431, 727, 867, 911
HhaI GCGC 4 cut(s) 157, 270, 449, 649
Hin1II CATG 6 cut(s) 223, 268, 284, 340, 466, 697
Hin6I GCGC 4 cut(s) 155, 268, 447, 647
HinP1I GCGC 4 cut(s) 155, 268, 447, 647
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 773
HinfI GANTC 3 cut(s) 88, 200, 235
HpaII CCGG 5 cut(s) 144, 431, 727, 867, 911
HphI GGTGA 3 cut(s) 821, 895, 1007
Hpy166II GTNNAC 3 cut(s) 397, 659, 793
Hpy188I TCNGA 4 cut(s) 234, 489, 559, 889
Hpy188III TCNNGA 6 cut(s) 92, 180, 220, 239, 471, 911
Hpy8I GTNNAC 3 cut(s) 397, 659, 793
HpyAV CCTTC 5 cut(s) 217, 415, 516, 944, 997
HpyCH4III ACNGT 1 cut(s) 276
HpyCH4IV ACGT 2 cut(s) 789, 801
HpyCH4V TGCA 4 cut(s) 4, 13, 362, 1038
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 410, 772
HpyF3I CTNAG 3 cut(s) 377, 556, 886
HpySE526I ACGT 2 cut(s) 789, 801
Hsp92II CATG 6 cut(s) 223, 268, 284, 340, 466, 697
HspAI GCGC 4 cut(s) 155, 268, 447, 647
Kpn2I TCCGGA 1 cut(s) 910
KroI GCCGGC 1 cut(s) 726
KroNI GCCGGC 1 cut(s) 728
Kzo9I GATC 4 cut(s) 380, 581, 889, 1009
LguI GCTCTTC 1 cut(s) 114
LmnI GCTCC 1 cut(s) 249
Lsp1109I GCAGC 2 cut(s) 25, 239
LweI GCATC 4 cut(s) 295, 466, 476, 808
MaeI CTAG 8 cut(s) 83, 341, 353, 471, 767, 785, 815, 1081
MaeII ACGT 2 cut(s) 789, 801
MaeIII GTNAC 5 cut(s) 78, 85, 802, 809, 995
MalI GATC 4 cut(s) 382, 583, 891, 1011
MboI GATC 4 cut(s) 380, 581, 889, 1009
MboII GAAGA 3 cut(s) 101, 115, 1050
MflI RGATCY 2 cut(s) 380, 581
MhlI GDGCHC 1 cut(s) 431
MluCI AATT 8 cut(s) 59, 95, 370, 617, 956, 1033, 1063, 1076
MlyI GAGTC 1 cut(s) 82
MmeI TCCRAC 1 cut(s) 507
MnlI CCTC 7 cut(s) 83, 268, 565, 608, 650, 866, 912
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 910
MroNI GCCGGC 1 cut(s) 726
MroXI GAANNNNTTC 1 cut(s) 935
MseI TTAA 6 cut(s) 26, 369, 536, 621, 633, 1047
MspI CCGG 5 cut(s) 144, 431, 727, 867, 911
MspR9I CCNGG 6 cut(s) 145, 168, 431, 432, 868, 1017
MvaI CCWGG 2 cut(s) 168, 1017
MwoI GCNNNNNNNGC 3 cut(s) 10, 410, 772
NaeI GCCGGC 1 cut(s) 728
NciI CCSGG 4 cut(s) 145, 431, 432, 868
NdeI CATATG 1 cut(s) 6
NdeII GATC 4 cut(s) 380, 581, 889, 1009
NgoMIV GCCGGC 1 cut(s) 726
NlaIII CATG 6 cut(s) 223, 268, 284, 340, 466, 697
NlaIV GGNNCC 4 cut(s) 148, 184, 251, 498
NmuCI GTSAC 4 cut(s) 78, 85, 809, 995
NsbI TGCGCA 1 cut(s) 448
NsiI ATGCAT 1 cut(s) 6
PaeR7I CTCGAG 1 cut(s) 90
PagI TCATGA 1 cut(s) 219
PaqCI CACCTGC 1 cut(s) 77
PciSI GCTCTTC 1 cut(s) 114
PdiI GCCGGC 1 cut(s) 728
PdmI GAANNNNTTC 1 cut(s) 935
PfeI GAWTC 2 cut(s) 200, 235
PkrI GCNGC 2 cut(s) 15, 229
PleI GAGTC 1 cut(s) 82
PpsI GAGTC 1 cut(s) 82
PshBI ATTAAT 1 cut(s) 369
PsiI TTATAA 1 cut(s) 458
Psp1406I AACGTT 1 cut(s) 801
Psp6I CCWGG 2 cut(s) 166, 1015
PspEI GGTNACC 1 cut(s) 809
PspGI CCWGG 2 cut(s) 166, 1015
PspN4I GGNNCC 4 cut(s) 148, 184, 251, 498
PspPI GGNCC 3 cut(s) 147, 497, 793
PstNI CAGNNNCTG 1 cut(s) 737
PsuI RGATCY 2 cut(s) 380, 581
RigI GGCCGGCC 1 cut(s) 730
RsaI GTAC 2 cut(s) 707, 848
RsaNI GTAC 2 cut(s) 706, 847
SapI GCTCTTC 1 cut(s) 114
SaqAI TTAA 6 cut(s) 26, 369, 536, 621, 633, 1047
SatI GCNGC 2 cut(s) 14, 228
Sau3AI GATC 4 cut(s) 380, 581, 889, 1009
Sau96I GGNCC 3 cut(s) 147, 497, 793
ScaI AGTACT 1 cut(s) 848
SchI GAGTC 1 cut(s) 82
ScrFI CCNGG 6 cut(s) 145, 168, 431, 432, 868, 1017
SduI GDGCHC 1 cut(s) 431
SfaNI GCATC 4 cut(s) 295, 466, 476, 808
SfcI CTRYAG 1 cut(s) 828
Sfr274I CTCGAG 1 cut(s) 90
SinI GGWCC 1 cut(s) 793
SlaI CTCGAG 1 cut(s) 90
SmaI CCCGGG 1 cut(s) 432
SmlI CTYRAG 1 cut(s) 90
SmoI CTYRAG 1 cut(s) 90
SpeI ACTAGT 1 cut(s) 82
Sse9I AATT 8 cut(s) 59, 95, 370, 617, 956, 1033, 1063, 1076
SsiI CCGC 1 cut(s) 163
SspMI CTAG 8 cut(s) 83, 341, 353, 471, 767, 785, 815, 1081
StyD4I CCNGG 6 cut(s) 143, 166, 429, 430, 866, 1015
StyI CCWWGG 1 cut(s) 414
TaaI ACNGT 1 cut(s) 276
TaiI ACGT 2 cut(s) 792, 804
TaqI TCGA 2 cut(s) 91, 238
TaqII GACCGA 1 cut(s) 250
TasI AATT 8 cut(s) 59, 95, 370, 617, 956, 1033, 1063, 1076
TatI WGTACW 2 cut(s) 705, 846
TfiI GAWTC 2 cut(s) 200, 235
Tru1I TTAA 6 cut(s) 26, 369, 536, 621, 633, 1047
Tru9I TTAA 6 cut(s) 26, 369, 536, 621, 633, 1047
TscAI CASTG 2 cut(s) 381, 727
TseFI GTSAC 4 cut(s) 78, 85, 809, 995
TseI GCWGC 2 cut(s) 13, 227
Tsp45I GTSAC 4 cut(s) 78, 85, 809, 995
TspDTI ATGAA 4 cut(s) 115, 236, 300, 963
TspGWI ACGGA 1 cut(s) 262
TspMI CCCGGG 1 cut(s) 430
TspRI CASTG 2 cut(s) 381, 727
VpaK11BI GGWCC 1 cut(s) 793
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 4 cut(s) 95, 617, 956, 1076
XbaI TCTAGA 1 cut(s) 470
XcmI CCANNNNNNNNNTGG 1 cut(s) 719
XhoI CTCGAG 1 cut(s) 90
XmaI CCCGGG 1 cut(s) 430
XmnI GAANNNNTTC 1 cut(s) 935
XspI CTAG 8 cut(s) 83, 341, 353, 471, 767, 785, 815, 1081
ZrmI AGTACT 1 cut(s) 848
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.