Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22420 |
| fragaria_vesca | FvH4_1g20350 FvH4_1g20360 FvH4_1g20360 |
| malus_domestica | MD01G1034400.v1.1 MD01G1034500.v1.1 MD01G1034900.v1.1 MD15G1321200.v1.1 MD15G1321300.v1.1 MD15G1321400.v1.1 |
| prunus_persica | Prupe.6G191800_v2.0.a1 Prupe.6G191900_v2.0.a1 Prupe.6G192000_v2.0.a1 |
| pyrus_communis | pycom01g06150 pycom01g06160 pycom01g06190 pycom15g28200 pycom15g28210 |
| rosa_chinensis | RchiOBHm_Chr2g0112481 RchiOBHm_Chr2g0112491 |
| rosa_laevigata | RLG00000017984 RLG00000017985 |
| rosa_multiflora | Rmu_co8298115.1_g000001 Rmu_co8310909.1_g000001 Rmu_sc0013522.1_g000001 Rmu_sc0026466.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00131380 Rroxscaffold_2G00131390 |
| rosa_rugosa | Rorug02G0181300 Rorug02G0181300 |
| rosa_samantha | Rh2AG234300 Rh2AG234400 Rh2BG247900 Rh2BG248000 Rh2CG238900 Rh2CG239000 Rh2DG241900 Rh2DG242000 |
| rosa_wichuraiana | Rw2G018150 Rw2G018160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 112, 344 |
| AclWI | GGATC | 1 cut(s) | 330 |
| AcsI | RAATTY | 3 cut(s) | 50, 316, 389 |
| AfaI | GTAC | 2 cut(s) | 140, 281 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 306 |
| AgsI | TTSAA | 5 cut(s) | 55, 179, 220, 286, 397 |
| AjnI | CCWGG | 1 cut(s) | 448 |
| AluBI | AGCT | 2 cut(s) | 199, 367 |
| AluI | AGCT | 2 cut(s) | 199, 367 |
| Alw26I | GTCTC | 1 cut(s) | 237 |
| AlwI | GGATC | 1 cut(s) | 330 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 170 |
| AoxI | GGCC | 1 cut(s) | 161 |
| ApoI | RAATTY | 3 cut(s) | 50, 316, 389 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 226 |
| AsuC2I | CCSGG | 1 cut(s) | 301 |
| AsuHPI | GGTGA | 1 cut(s) | 440 |
| AvaII | GGWCC | 1 cut(s) | 226 |
| BccI | CCATC | 2 cut(s) | 131, 418 |
| BciT130I | CCWGG | 1 cut(s) | 450 |
| BclI | TGATCA | 1 cut(s) | 379 |
| BcnI | CCSGG | 1 cut(s) | 301 |
| BcoDI | GTCTC | 1 cut(s) | 237 |
| BmcAI | AGTACT | 1 cut(s) | 281 |
| Bme1390I | CCNGG | 2 cut(s) | 301, 450 |
| Bme18I | GGWCC | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 1 cut(s) | 226 |
| BmrFI | CCNGG | 2 cut(s) | 301, 450 |
| BmsI | GCATC | 2 cut(s) | 10, 241 |
| BpmI | CTGGAG | 1 cut(s) | 261 |
| BpuMI | CCSGG | 1 cut(s) | 301 |
| BsaI | GGTCTC | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 1 cut(s) | 449 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 306 |
| Bse1I | ACTGG | 3 cut(s) | 160, 244, 277 |
| Bse3DI | GCAATG | 1 cut(s) | 382 |
| BseBI | CCWGG | 1 cut(s) | 450 |
| BseDI | CCNNGG | 1 cut(s) | 449 |
| BseGI | GGATG | 1 cut(s) | 420 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 306 |
| BseMI | GCAATG | 1 cut(s) | 382 |
| BseNI | ACTGG | 3 cut(s) | 160, 244, 277 |
| BshFI | GGCC | 1 cut(s) | 163 |
| BsiSI | CCGG | 2 cut(s) | 150, 300 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 306 |
| BsmAI | GTCTC | 1 cut(s) | 237 |
| BsnI | GGCC | 1 cut(s) | 163 |
| Bso31I | GGTCTC | 1 cut(s) | 237 |
| Bsp1407I | TGTACA | 1 cut(s) | 138 |
| Bsp143I | GATC | 2 cut(s) | 322, 379 |
| BspACI | CCGC | 2 cut(s) | 112, 344 |
| BspANI | GGCC | 1 cut(s) | 163 |
| BspPI | GGATC | 1 cut(s) | 330 |
| BspTNI | GGTCTC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 1 cut(s) | 382 |
| BsrGI | TGTACA | 1 cut(s) | 138 |
| BsrI | ACTGG | 3 cut(s) | 160, 244, 277 |
| BssECI | CCNNGG | 1 cut(s) | 449 |
| BssMI | GATC | 2 cut(s) | 322, 379 |
| Bst2UI | CCWGG | 1 cut(s) | 450 |
| BstAUI | TGTACA | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 420 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstKTI | GATC | 2 cut(s) | 325, 382 |
| BstMAI | GTCTC | 1 cut(s) | 237 |
| BstMBI | GATC | 2 cut(s) | 322, 379 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 442 |
| BstNI | CCWGG | 1 cut(s) | 450 |
| BstSCI | CCNGG | 2 cut(s) | 299, 448 |
| BsuRI | GGCC | 1 cut(s) | 163 |
| BtsCI | GGATG | 1 cut(s) | 420 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| Cac8I | GCNNGC | 1 cut(s) | 161 |
| CaiI | CAGNNNCTG | 1 cut(s) | 170 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr13I | GGNCC | 1 cut(s) | 226 |
| Csp6I | GTAC | 2 cut(s) | 139, 280 |
| CviAII | CATG | 1 cut(s) | 127 |
| CviJI | RGCY | 8 cut(s) | 17, 136, 163, 199, 296, 367, 401, 479 |
| CviKI_1 | RGCY | 8 cut(s) | 17, 136, 163, 199, 296, 367, 401, 479 |
| CviQI | GTAC | 2 cut(s) | 139, 280 |
| DpnI | GATC | 2 cut(s) | 324, 381 |
| DpnII | GATC | 2 cut(s) | 322, 379 |
| Eco31I | GGTCTC | 1 cut(s) | 237 |
| Eco47I | GGWCC | 1 cut(s) | 226 |
| EcoRI | GAATTC | 1 cut(s) | 316 |
| EcoRII | CCWGG | 1 cut(s) | 448 |
| FaeI | CATG | 1 cut(s) | 130 |
| FaiI | YATR | 3 cut(s) | 128, 211, 263 |
| FatI | CATG | 1 cut(s) | 126 |
| FbaI | TGATCA | 1 cut(s) | 379 |
| FokI | GGATG | 1 cut(s) | 427 |
| GlaI | GCGC | 1 cut(s) | 81 |
| GsuI | CTGGAG | 1 cut(s) | 261 |
| HaeIII | GGCC | 1 cut(s) | 163 |
| HapII | CCGG | 2 cut(s) | 150, 300 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin1II | CATG | 1 cut(s) | 130 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HinfI | GANTC | 1 cut(s) | 7 |
| HpaII | CCGG | 2 cut(s) | 150, 300 |
| HphI | GGTGA | 1 cut(s) | 440 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 3 cut(s) | 315, 322, 506 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| Hpy99I | CGWCG | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 3 cut(s) | 23, 436, 471 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 442 |
| Hsp92II | CATG | 1 cut(s) | 130 |
| HspAI | GCGC | 1 cut(s) | 80 |
| Ksp22I | TGATCA | 1 cut(s) | 379 |
| Kzo9I | GATC | 2 cut(s) | 322, 379 |
| LweI | GCATC | 2 cut(s) | 10, 241 |
| MaeIII | GTNAC | 3 cut(s) | 90, 235, 428 |
| MalI | GATC | 2 cut(s) | 324, 381 |
| MboI | GATC | 2 cut(s) | 322, 379 |
| MluCI | AATT | 4 cut(s) | 50, 316, 389, 466 |
| MlyI | GAGTC | 1 cut(s) | 16 |
| MnlI | CCTC | 6 cut(s) | 37, 41, 50, 299, 347, 403 |
| MseI | TTAA | 1 cut(s) | 363 |
| MspI | CCGG | 2 cut(s) | 150, 300 |
| MspR9I | CCNGG | 2 cut(s) | 301, 450 |
| MvaI | CCWGG | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 442 |
| NciI | CCSGG | 1 cut(s) | 301 |
| NdeII | GATC | 2 cut(s) | 322, 379 |
| NlaIII | CATG | 1 cut(s) | 130 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 3 cut(s) | 90, 235, 428 |
| PfoI | TCCNGGA | 1 cut(s) | 299 |
| PleI | GAGTC | 1 cut(s) | 15 |
| PpsI | GAGTC | 1 cut(s) | 15 |
| Psp6I | CCWGG | 1 cut(s) | 448 |
| PspGI | CCWGG | 1 cut(s) | 448 |
| PspPI | GGNCC | 1 cut(s) | 226 |
| PstNI | CAGNNNCTG | 1 cut(s) | 170 |
| RsaI | GTAC | 2 cut(s) | 140, 281 |
| RsaNI | GTAC | 2 cut(s) | 139, 280 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| Sau3AI | GATC | 2 cut(s) | 322, 379 |
| Sau96I | GGNCC | 1 cut(s) | 226 |
| ScaI | AGTACT | 1 cut(s) | 281 |
| SchI | GAGTC | 1 cut(s) | 16 |
| ScrFI | CCNGG | 2 cut(s) | 301, 450 |
| SetI | ASST | 8 cut(s) | 29, 42, 75, 201, 249, 262, 369, 451 |
| SfaNI | GCATC | 2 cut(s) | 10, 241 |
| SinI | GGWCC | 1 cut(s) | 226 |
| Sse9I | AATT | 4 cut(s) | 50, 316, 389, 466 |
| SsiI | CCGC | 2 cut(s) | 112, 344 |
| SspI | AATATT | 1 cut(s) | 267 |
| StyD4I | CCNGG | 2 cut(s) | 299, 448 |
| TasI | AATT | 4 cut(s) | 50, 316, 389, 466 |
| TatI | WGTACW | 2 cut(s) | 138, 279 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseFI | GTSAC | 3 cut(s) | 90, 235, 428 |
| Tsp45I | GTSAC | 3 cut(s) | 90, 235, 428 |
| TspRI | CASTG | 1 cut(s) | 160 |
| VpaK11BI | GGWCC | 1 cut(s) | 226 |
| XapI | RAATTY | 3 cut(s) | 50, 316, 389 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 152, 236 |
| ZrmI | AGTACT | 1 cut(s) | 281 |