AT2G24650

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001490
Physical Location & Seq
Reverse (-)
10483253 .. 10487773
4521 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G24650.3

Sequence Viewer

Length: 3138 bp
ATGGCGAATTCAAGGATTTATCCGCAATTCTTCCACACACTTGTTCCTAGCTTCCACACTCACTTGATGATTCCTGAAGACTTCTTCTCAGAGTATATCGAAGGAAGAAGCGTCGCAGAGCTGAAATTGGACTTTTCAGACAAATCTTGGGAAGTGAAGTTGTCTGATCGGAGAATCACTGACGGCTGGGAAGAGTTTGTGGTGGCTAATGATTTTCGTATCGGCGATGTTGTCGCTTTTAGATATGTTGGAAATTTGGTGTTCCATGTTTCTAATTTAGGACCTAATTACTATGAGATTGAACACAATGATGGTGAAAGTTTGTTAAGAAAGCGTTTGCATCAAGTAGACTTTTCATCAAACAATGGAGATGTTTGTGATAGTGAAGAGCTTCCCAAAGAGAAGAAAGCGAAGACGAACAGTGAAGAAGCAGATGCAGTTTCTTCTTCTTCATCAGCAGACAAGTCATGTTTTATGGCCATTATCACAGCTTTAGATCTAACGACAGATACACTGTATCTTCCACTACATTTTACAAGCGCAAATGGTCTTACACGAAAAAACCGGGAGATTATTTTAACAGATGGAGGGGAAAGATCAAGGGTATTGGATCTGAGGTTCGACGAATCATCTGGTACTTTTTATATCAGCCGGGGTTGGAGAAATTTCTGTGATGAAAATGGACAAAAAGCAGGAGGTTTCTTTCTGTTTAAACTAGTGGGAAAAGGTGAAACGCTGGTGCTCAGTTTCTGTCCTACAGAATCTATCAATGGGGAAGAGAACATAACAAGGGAGGACAGTAAAGACGAGTGCAGCTCGTTGGACTCATTGATGAATATAGTAGAAAAAAAGAAGTATATTCCGAAACCAAGAGGTTCACCATATTCATCATATTCACCAAGTCATAAACAATTCGTAACATTTACGCTTCCACCGGATTATGCTAGAATTGGAAAATTGAGTCTTTCGGCGCCTTTCGTTAGGGAAAATGGCATCAACAAGCCTGGGGAGATATGTCTTTTGGATAAACATGGTAGAAAGTGGTTGACAAGTCTTCTGCTGGACAGTAAAGGAACAATGTCTTTGGGAAAGGGTTGGAAAGAGTTTGTTAAAGCAAACAGCTTAGAGACGGGCTTCACACTCAAGTTGATATGGGAAGAAACAACTCCTGTGCTTAGTTTGTGTAGTCCAGAATCTAACAGTGACAGAGAGCAGGAAGAGATTTCAAAAGCTATCGAGAAACATTCTCTTTTCATAGATCCTAGCAACAGGGACAAAATCAGCAACAATGACAAAGAGGAGAACATGTCATGGGAGAGAAAGAAGGATCATCTGAAAAGTAGAGATTCAACTCTATCAAGCCAAAAACAATTTGTAACAATAACAATTACACCTTCCAGTGATAGATTGGTAAGTTTATCAAATGACTCTTGTTTAGTGGTTGTTAGTTTATTGTACTTTGATATGCGTCTCCCAAAGGTATTCACGAGGGAGAATGGCATCAACAAGCCGGGGAGGATTACTCTGTTGGGAAAAGACGGTATAAAGCAGCAGACGAATTTGTTATTCGACAAAGCAAATGGTGCCATGTCTTTGGGACACGGCTGGAAAGATTTTGTTAAAGATAATGGCTTAAAGACAGGTGACTCCTTCACGCTAAAGTTGATTTGGGAAGACCAAACTCCTGTTCTTAGCTTGTGTCCTGCAGACTGTAGCATTGACAGAGAAGCAGGAGGAGGGCGATCTGAAACAAACCAGAAAAAGTCTCTTCCAATAGAACCTAGCACATGTAAAAAAATCAGGAAAGACGTGAACATCAAAGATGACAACAGCAAAGAGAAAAATGACAAAGAAGAGAGCAAATCAGTGGATGGAGAGAGGAAATATCTGAGAGGGACATATTTAACTCCATCAAGCCAAAAACACTTTGTGACATTAACAATTACACCTTCCTCTATAAAAAAAGATAGACTTATTCTTTCCCCACAATTTGCAAGGAAGAACAATATTGACAAGCCTGGAATGATATATCTGCTGGATACAGATGGTACAAAGTGGCTGATAAGCCTTCAACGAGATAAGAAAGGAACAATGAGTTTGGGAAAAGGTTGGAAAGAATTTGCTGAAGCAAATGACTTTAAGTTAGGCGAATCCTTTACGATGGAGTTAGTATGGGAAGACACAACTCCTATGCTCAGTTTGTTACGTACCGAGTTTAGGAGTTCAAAAGCTAACGAGAAAGAGTCAATTTCCTCAGAACATAAAACCAGAGAATCATCCCCAACAATCAAAAACCGAATCGTGACTCCAGCACTCACACCTGAAGATGTTAAAGCCTGTAAATTGATTCTTCCAAGTCAATTCATGAAGAAGATCAGGACAGTGGATAAAGAGAGGAATCATCTAAAAGGGAGAGATTTAAATCCATCGTGCCAAAAACAATTTGTAACATTTACAATTACACCAACCTGTGTCGGAAAAAATAGGCTGATTCTTTCAGCGCAATTTGCAAGGGAGAACAATATTAACCAGCCTGGAACGATATATCTATTGGATACAGATGGTAGGAAGTGGCTGACAACGGTTAAACGGGACAAGAAAGGAACAATGAGTTTGGGAAAGGGTTGGAAAGAGTTTGCTGATACAAAAGACTTAAAGTCAGGCGACTCCTTTACGATGGAGTTAATATGGGAAGACACAAATCCTGTGCTCAGTTTGTTACGTACAAAGTTTAGCAGTTCTAAATCTAACAAGGAAGAGTCCATTTTTTTAGAACCAAAAAGTAGAGATTCATCCTCCCCAACAATCGTAAACAGATTCGTGACATTAGCACTTACACCAGAAGATGTTACAGCCTGTAAACTGATTCTTCCAAGTCAGTTCATGAAGGCTAATGGCATCAACAACAAACTTGGGAAGATAACTCTTTTGGGTGAAAACGGAGTCGAATGGCCGGGATATATGTTGTCGCTAGATGGAACTCTCGCTTTAGGAAATGGTTGGGAAGGCTTTTGTGAGGCTAATGGCGTGAAGTTAGGACAGACTTTTACTTTGGAGTTTGTTAATGAACAAGATACAACAACAACTCCGGTACTCAAGTTCTCTTCTGTGGAGACTATATACAAAAATGTTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

1045

Amino Acids

117.8

Weight (kDa)

8.1

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 11 - 87 4.4e-09 B3 DNA binding domain
B3 PF02362 163 - 253 4.6e-17 B3 DNA binding domain
B3 PF02362 305 - 396 8.5e-18 B3 DNA binding domain
B3 PF02362 466 - 550 9.2e-20 B3 DNA binding domain
B3 PF02362 624 - 718 6.2e-20 B3 DNA binding domain
B3 PF02362 796 - 890 1.2e-19 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 970, 1583
AccI GTMKAC 1 cut(s) 348
AciI CCGC 1 cut(s) 23
AclWI GGATC 3 cut(s) 618, 1253, 1335
AcoI YGGCCR 2 cut(s) 477, 2951
AcsI RAATTY 5 cut(s) 7, 253, 664, 1558, 2117
AcuI CTGAAG 3 cut(s) 96, 2145, 2343
AcyI GRCGYC 1 cut(s) 971
AdeI CACNNNGTG 1 cut(s) 1930
AfaI GTAC 6 cut(s) 637, 1457, 2050, 2209, 2725, 3093
AfiI CCNNNNNNNGG 1 cut(s) 2217
AflIII ACRYGT 2 cut(s) 1305, 1787
AgsI TTSAA 6 cut(s) 12, 302, 1227, 1350, 2072, 2226
AhdI GACNNNNNGTC 1 cut(s) 2656
AhlI ACTAGT 1 cut(s) 715
AjiI CACGTC 1 cut(s) 1810
AjnI CCWGG 3 cut(s) 1003, 2017, 2533
AjuI GAANNNNNNNTTGG 2 cut(s) 1671, 1703
AloI GAACNNNNNNTCC 2 cut(s) 602, 634
AluBI AGCT 9 cut(s) 51, 121, 391, 491, 816, 1122, 1232, 1695, 2231
AluI AGCT 9 cut(s) 51, 121, 391, 491, 816, 1122, 1232, 1695, 2231
Alw21I GWGCWC 2 cut(s) 744, 2712
Alw26I GTCTC 4 cut(s) 1121, 1475, 1770, 3107
AlwI GGATC 3 cut(s) 618, 1253, 1335
AlwNI CAGNNNCTG 1 cut(s) 750
AoxI GGCC 2 cut(s) 477, 2951
ApeKI GCWGC 2 cut(s) 813, 1549
ApoI RAATTY 5 cut(s) 7, 253, 664, 1558, 2117
ArsI GACNNNNNNTTYG 2 cut(s) 3034, 3066
Asp700I GAANNNNTTC 1 cut(s) 390
AspLEI GCGC 3 cut(s) 542, 973, 2503
AspS9I GGNCC 1 cut(s) 281
AsuC2I CCSGG 4 cut(s) 566, 653, 1512, 2955
AsuHPI GGTGA 6 cut(s) 326, 740, 870, 888, 1655, 2945
AvaII GGWCC 1 cut(s) 281
BaeI ACNNNNGTAYC 2 cut(s) 3083, 3116
BalI TGGCCA 1 cut(s) 479
BanI GGYRCC 2 cut(s) 970, 1583
BauI CACGAG 1 cut(s) 1486
BbsI GAAGAC 6 cut(s) 84, 419, 1046, 1680, 2184, 2700
Bbv12I GWGCWC 2 cut(s) 744, 2712
BbvI GCAGC 2 cut(s) 825, 1561
BceAI ACGGC 2 cut(s) 199, 1618
BciT130I CCWGG 3 cut(s) 1005, 2019, 2535
BciVI GTATCC 2 cut(s) 2032, 2548
BcnI CCSGG 4 cut(s) 566, 653, 1512, 2955
BcoDI GTCTC 4 cut(s) 1121, 1475, 1770, 3107
BcuI ACTAGT 1 cut(s) 715
BfaI CTAG 6 cut(s) 48, 716, 945, 1263, 1782, 2972
BfmI CTRYAG 3 cut(s) 756, 1704, 1711
BfoI RGCGCY 1 cut(s) 974
BfuI GTATCC 2 cut(s) 2032, 2548
BglII AGATCT 1 cut(s) 496
BisI GCNGC 2 cut(s) 814, 1550
BlsI GCNGC 2 cut(s) 815, 1551
Bme1390I CCNGG 7 cut(s) 566, 653, 1005, 1512, 2019, 2535, 2955
Bme18I GGWCC 1 cut(s) 281
BmeRI GACNNNNNGTC 1 cut(s) 2656
BmgBI CACGTC 1 cut(s) 1810
BmgT120I GGNCC 1 cut(s) 281
BmiI GGNNCC 2 cut(s) 972, 1585
BmrFI CCNGG 7 cut(s) 566, 653, 1005, 1512, 2019, 2535, 2955
BmsI GCATC 5 cut(s) 349, 424, 1002, 1509, 2907
BpiI GAAGAC 6 cut(s) 84, 419, 1046, 1680, 2184, 2700
BplI GAGNNNNNCTC 4 cut(s) 800, 832, 1507, 1539
BpmI CTGGAG 1 cut(s) 2292
BpuEI CTTGAG 2 cut(s) 1127, 3080
BpuMI CCSGG 4 cut(s) 566, 653, 1512, 2955
BsaAI YACGTR 2 cut(s) 2207, 2723
BsaBI GATNNNNATC 1 cut(s) 2421
BsaHI GRCGYC 1 cut(s) 971
BsaJI CCNNGG 3 cut(s) 652, 1004, 1511
BsaWI WCCGGW 2 cut(s) 934, 3088
BsaXI ACNNNNNCTCC 4 cut(s) 1292, 1322, 3070, 3100
Bsc4I CCNNNNNNNGG 1 cut(s) 2217
Bse1I ACTGG 1 cut(s) 1398
Bse8I GATNNNNATC 1 cut(s) 2421
BseBI CCWGG 3 cut(s) 1005, 2019, 2535
BseDI CCNNGG 3 cut(s) 652, 1004, 1511
BseGI GGATG 3 cut(s) 1876, 2276, 2792
BseJI GATNNNNATC 1 cut(s) 2421
BseLI CCNNNNNNNGG 1 cut(s) 2217
BseMII CTCAG 7 cut(s) 102, 605, 757, 1880, 2209, 2268, 2725
BseNI ACTGG 1 cut(s) 1398
BseRI GAGGAG 2 cut(s) 1313, 1749
BseXI GCAGC 2 cut(s) 825, 1561
BseYI CCCAGC 1 cut(s) 186
BsgI GTGCAG 1 cut(s) 832
BshFI GGCC 2 cut(s) 479, 2953
BshNI GGYRCC 2 cut(s) 970, 1583
BsiHKAI GWGCWC 2 cut(s) 744, 2712
BsiSI CCGG 6 cut(s) 565, 652, 935, 1511, 2954, 3089
BslFI GGGAC 4 cut(s) 1286, 1611, 1909, 2606
BslI CCNNNNNNNGG 1 cut(s) 2217
BsmAI GTCTC 4 cut(s) 1121, 1475, 1770, 3107
BsmBI CGTCTC 2 cut(s) 1121, 1475
BsmFI GGGAC 4 cut(s) 1286, 1611, 1909, 2606
BsnI GGCC 2 cut(s) 479, 2953
Bsp1286I GDGCHC 2 cut(s) 744, 2712
Bsp143I GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
BspACI CCGC 1 cut(s) 23
BspANI GGCC 2 cut(s) 479, 2953
BspCNI CTCAG 7 cut(s) 101, 606, 756, 1881, 2208, 2267, 2724
BspHI TCATGA 2 cut(s) 2364, 2883
BspLI GGNNCC 2 cut(s) 972, 1585
BspMAI CTGCAG 1 cut(s) 1708
BspPI GGATC 3 cut(s) 618, 1253, 1335
BspQI GCTCTTC 1 cut(s) 381
BspT107I GGYRCC 2 cut(s) 970, 1583
BsrI ACTGG 1 cut(s) 1398
BssECI CCNNGG 3 cut(s) 652, 1004, 1511
BssMI GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
BssNI GRCGYC 1 cut(s) 971
BssSI CACGAG 1 cut(s) 1486
Bst2BI CACGAG 1 cut(s) 1486
Bst2UI CCWGG 3 cut(s) 1005, 2019, 2535
Bst4CI ACNGT 9 cut(s) 422, 516, 800, 1067, 1202, 1541, 1712, 2383, 2584
Bst6I CTCTTC 8 cut(s) 186, 381, 771, 1212, 1773, 1848, 2751, 3109
BstACI GRCGYC 1 cut(s) 971
BstAPI GCANNNNNTGC 1 cut(s) 1583
BstBAI YACGTR 2 cut(s) 2207, 2723
BstF5I GGATG 3 cut(s) 1876, 2276, 2792
BstH2I RGCGCY 1 cut(s) 974
BstHHI GCGC 3 cut(s) 542, 973, 2503
BstKTI GATC 8 cut(s) 169, 499, 599, 613, 1261, 1330, 1745, 2376
BstMAI GTCTC 4 cut(s) 1121, 1475, 1770, 3107
BstMBI GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
BstMWI GCNNNNNNNGC 2 cut(s) 1583, 2507
BstNI CCWGG 3 cut(s) 1005, 2019, 2535
BstNSI RCATGY 2 cut(s) 1309, 1791
BstSCI CCNGG 7 cut(s) 564, 651, 1003, 1510, 2017, 2533, 2953
BstSFI CTRYAG 3 cut(s) 756, 1704, 1711
BstSNI TACGTA 2 cut(s) 2207, 2723
BstV1I GCAGC 2 cut(s) 825, 1561
BstV2I GAAGAC 6 cut(s) 84, 419, 1046, 1680, 2184, 2700
BstX2I RGATCY 3 cut(s) 496, 610, 1258
BstXI CCANNNNNNTGG 1 cut(s) 1594
BstYI RGATCY 3 cut(s) 496, 610, 1258
BsuI GTATCC 2 cut(s) 2032, 2548
BsuRI GGCC 2 cut(s) 479, 2953
BtgZI GCGATG 1 cut(s) 240
BtrI CACGTC 1 cut(s) 1810
BtsCI GGATG 3 cut(s) 1876, 2276, 2792
BtsIMutI CAGTG 7 cut(s) 177, 427, 512, 1207, 1405, 1872, 2388
CaiI CAGNNNCTG 1 cut(s) 750
CciI TCATGA 2 cut(s) 2364, 2883
CfoI GCGC 3 cut(s) 542, 973, 2503
Cfr13I GGNCC 1 cut(s) 281
CseI GACGC 2 cut(s) 100, 1457
Csp6I GTAC 6 cut(s) 636, 1456, 2049, 2208, 2724, 3092
CviAII CATG 9 cut(s) 266, 468, 1031, 1306, 1311, 1588, 1788, 2365, 2884
CviQI GTAC 6 cut(s) 636, 1456, 2049, 2208, 2724, 3092
DinI GGCGCC 1 cut(s) 972
DpnI GATC 8 cut(s) 168, 498, 598, 612, 1260, 1329, 1744, 2375
DpnII GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
DraI TTTAAA 2 cut(s) 712, 2421
DraIII CACNNNGTG 1 cut(s) 1930
DriI GACNNNNNGTC 1 cut(s) 2656
EaeI YGGCCR 2 cut(s) 477, 2951
Eam1104I CTCTTC 8 cut(s) 186, 381, 771, 1212, 1773, 1848, 2751, 3109
Eam1105I GACNNNNNGTC 1 cut(s) 2656
EarI CTCTTC 8 cut(s) 186, 381, 771, 1212, 1773, 1848, 2751, 3109
Eco105I TACGTA 2 cut(s) 2207, 2723
Eco47I GGWCC 1 cut(s) 281
Eco57I CTGAAG 3 cut(s) 96, 2145, 2343
EcoO109I RGGNCCY 1 cut(s) 281
EcoRI GAATTC 1 cut(s) 7
EcoRII CCWGG 3 cut(s) 1003, 2017, 2533
EgeI GGCGCC 1 cut(s) 972
EheI GGCGCC 1 cut(s) 972
Esp3I CGTCTC 2 cut(s) 1121, 1475
FaeI CATG 9 cut(s) 269, 471, 1034, 1309, 1314, 1591, 1791, 2368, 2887
FalI AAGNNNNNCTT 2 cut(s) 1956, 1988
FaqI GGGAC 4 cut(s) 1286, 1611, 1909, 2606
FatI CATG 9 cut(s) 265, 467, 1030, 1305, 1310, 1587, 1787, 2364, 2883
FblI GTMKAC 1 cut(s) 348
Fnu4HI GCNGC 2 cut(s) 814, 1550
FokI GGATG 3 cut(s) 1883, 2263, 2779
Fsp4HI GCNGC 2 cut(s) 814, 1550
FspBI CTAG 6 cut(s) 48, 716, 945, 1263, 1782, 2972
GlaI GCGC 3 cut(s) 541, 972, 2502
GluI GCNGC 2 cut(s) 814, 1550
GsaI CCCAGC 1 cut(s) 190
GsuI CTGGAG 1 cut(s) 2292
HaeII RGCGCY 1 cut(s) 974
HaeIII GGCC 2 cut(s) 479, 2953
HapII CCGG 6 cut(s) 565, 652, 935, 1511, 2954, 3089
HgaI GACGC 2 cut(s) 100, 1457
HhaI GCGC 3 cut(s) 542, 973, 2503
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 9 cut(s) 269, 471, 1034, 1309, 1314, 1591, 1791, 2368, 2887
Hin6I GCGC 3 cut(s) 540, 971, 2501
HinP1I GCGC 3 cut(s) 540, 971, 2501
HincII GTYRAC 1 cut(s) 1047
HindII GTYRAC 1 cut(s) 1047
HpaII CCGG 6 cut(s) 565, 652, 935, 1511, 2954, 3089
HphI GGTGA 6 cut(s) 326, 740, 870, 888, 1655, 2945
Hpy166II GTNNAC 6 cut(s) 349, 878, 1047, 1813, 2812, 2861
Hpy8I GTNNAC 6 cut(s) 349, 878, 1047, 1813, 2812, 2861
Hpy99I CGWCG 2 cut(s) 116, 626
HpyAV CCTTC 8 cut(s) 95, 1318, 1404, 1660, 1959, 2078, 2881, 2999
HpyCH4III ACNGT 9 cut(s) 422, 516, 800, 1067, 1202, 1541, 1712, 2383, 2584
HpyCH4IV ACGT 3 cut(s) 1809, 2206, 2722
HpyCH4V TGCA 6 cut(s) 340, 437, 813, 1706, 1994, 2510
HpyF10VI GCNNNNNNNGC 2 cut(s) 1583, 2507
HpySE526I ACGT 3 cut(s) 1809, 2206, 2722
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 9 cut(s) 269, 471, 1034, 1309, 1314, 1591, 1791, 2368, 2887
HspAI GCGC 3 cut(s) 540, 971, 2501
KasI GGCGCC 1 cut(s) 970
Kzo9I GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
LguI GCTCTTC 1 cut(s) 381
Lsp1109I GCAGC 2 cut(s) 825, 1561
LweI GCATC 5 cut(s) 349, 424, 1002, 1509, 2907
MaeI CTAG 6 cut(s) 48, 716, 945, 1263, 1782, 2972
MaeII ACGT 3 cut(s) 1809, 2206, 2722
MalI GATC 8 cut(s) 168, 498, 598, 612, 1260, 1329, 1744, 2375
MboI GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
MflI RGATCY 3 cut(s) 496, 610, 1258
MhlI GDGCHC 2 cut(s) 744, 2712
MlsI TGGCCA 1 cut(s) 479
MluNI TGGCCA 1 cut(s) 479
Mly113I GGCGCC 1 cut(s) 971
MlyI GAGTC 9 cut(s) 818, 970, 1421, 1640, 2252, 2299, 2660, 2768, 2952
MmeI TCCRAC 7 cut(s) 229, 638, 801, 1076, 2090, 2455, 2606
Mox20I TGGCCA 1 cut(s) 479
MroXI GAANNNNTTC 1 cut(s) 390
MscI TGGCCA 1 cut(s) 479
MslI CAYNNNNRTG 1 cut(s) 309
Msp20I TGGCCA 1 cut(s) 479
MspI CCGG 6 cut(s) 565, 652, 935, 1511, 2954, 3089
MspR9I CCNGG 7 cut(s) 566, 653, 1005, 1512, 2019, 2535, 2955
MssI GTTTAAAC 1 cut(s) 712
MvaI CCWGG 3 cut(s) 1005, 2019, 2535
MwoI GCNNNNNNNGC 2 cut(s) 1583, 2507
NarI GGCGCC 1 cut(s) 971
NciI CCSGG 4 cut(s) 566, 653, 1512, 2955
NdeII GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
NlaIII CATG 9 cut(s) 269, 471, 1034, 1309, 1314, 1591, 1791, 2368, 2887
NlaIV GGNNCC 2 cut(s) 972, 1585
NmuCI GTSAC 5 cut(s) 1202, 1643, 1930, 2302, 2821
NspI RCATGY 2 cut(s) 1309, 1791
PagI TCATGA 2 cut(s) 2364, 2883
PciI ACATGT 2 cut(s) 1305, 1787
PciSI GCTCTTC 1 cut(s) 381
PdmI GAANNNNTTC 1 cut(s) 390
PkrI GCNGC 2 cut(s) 815, 1551
PleI GAGTC 9 cut(s) 818, 969, 1421, 1640, 2251, 2299, 2660, 2767, 2951
PluTI GGCGCC 1 cut(s) 974
PmeI GTTTAAAC 1 cut(s) 712
PpsI GAGTC 9 cut(s) 818, 969, 1421, 1640, 2251, 2299, 2660, 2767, 2951
Ppu21I YACGTR 2 cut(s) 2207, 2723
PpuMI RGGWCCY 1 cut(s) 281
PscI ACATGT 2 cut(s) 1305, 1787
Psp5II RGGWCCY 1 cut(s) 281
Psp6I CCWGG 3 cut(s) 1003, 2017, 2533
PspFI CCCAGC 1 cut(s) 186
PspGI CCWGG 3 cut(s) 1003, 2017, 2533
PspN4I GGNNCC 2 cut(s) 972, 1585
PspPI GGNCC 1 cut(s) 281
PspPPI RGGWCCY 1 cut(s) 281
PstI CTGCAG 1 cut(s) 1708
PstNI CAGNNNCTG 1 cut(s) 750
PsuI RGATCY 3 cut(s) 496, 610, 1258
RsaI GTAC 6 cut(s) 637, 1457, 2050, 2209, 2725, 3093
RsaNI GTAC 6 cut(s) 636, 1456, 2049, 2208, 2724, 3092
RseI CAYNNNNRTG 1 cut(s) 309
SapI GCTCTTC 1 cut(s) 381
SatI GCNGC 2 cut(s) 814, 1550
Sau3AI GATC 8 cut(s) 166, 496, 596, 610, 1258, 1327, 1742, 2373
Sau96I GGNCC 1 cut(s) 281
SchI GAGTC 9 cut(s) 818, 970, 1421, 1640, 2252, 2299, 2660, 2768, 2952
ScrFI CCNGG 7 cut(s) 566, 653, 1005, 1512, 2019, 2535, 2955
SduI GDGCHC 2 cut(s) 744, 2712
SfaNI GCATC 5 cut(s) 349, 424, 1002, 1509, 2907
SfcI CTRYAG 3 cut(s) 756, 1704, 1711
SfoI GGCGCC 1 cut(s) 972
SinI GGWCC 1 cut(s) 281
SmiI ATTTAAAT 1 cut(s) 2421
SmiMI CAYNNNNRTG 1 cut(s) 309
SmlI CTYRAG 2 cut(s) 1142, 3095
SmoI CTYRAG 2 cut(s) 1142, 3095
SnaBI TACGTA 2 cut(s) 2207, 2723
SpeI ACTAGT 1 cut(s) 715
SsiI CCGC 1 cut(s) 23
SspDI GGCGCC 1 cut(s) 970
SspI AATATT 2 cut(s) 2008, 2524
SspMI CTAG 6 cut(s) 48, 716, 945, 1263, 1782, 2972
StyD4I CCNGG 7 cut(s) 564, 651, 1003, 1510, 2017, 2533, 2953
SwaI ATTTAAAT 1 cut(s) 2421
TaaI ACNGT 9 cut(s) 422, 516, 800, 1067, 1202, 1541, 1712, 2383, 2584
TaiI ACGT 3 cut(s) 1812, 2209, 2725
TaqI TCGA 5 cut(s) 99, 621, 1236, 1569, 2946
TatI WGTACW 1 cut(s) 1455
TscAI CASTG 7 cut(s) 184, 427, 519, 1207, 1405, 1872, 2388
TseFI GTSAC 5 cut(s) 1202, 1643, 1930, 2302, 2821
TseI GCWGC 2 cut(s) 813, 1549
Tsp45I GTSAC 5 cut(s) 1202, 1643, 1930, 2302, 2821
TspGWI ACGGA 1 cut(s) 2955
TspRI CASTG 7 cut(s) 184, 427, 519, 1207, 1405, 1872, 2388
VpaK11BI GGWCC 1 cut(s) 281
XapI RAATTY 5 cut(s) 7, 253, 664, 1558, 2117
XceI RCATGY 2 cut(s) 1309, 1791
XcmI CCANNNNNNNNNTGG 1 cut(s) 1405
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 1 cut(s) 390
XspI CTAG 6 cut(s) 48, 716, 945, 1263, 1782, 2972
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.