B3 domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 486, 597 |
| AciI | CCGC | 2 cut(s) | 1450, 1469 |
| AcoI | YGGCCR | 3 cut(s) | 187, 456, 613 |
| AcsI | RAATTY | 3 cut(s) | 917, 1061, 1439 |
| AcuI | CTGAAG | 1 cut(s) | 746 |
| AfaI | GTAC | 3 cut(s) | 107, 373, 1513 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 346 |
| AflII | CTTAAG | 1 cut(s) | 1646 |
| AjnI | CCWGG | 3 cut(s) | 75, 670, 1045 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 39, 71 |
| AluBI | AGCT | 5 cut(s) | 142, 296, 416, 803, 1262 |
| AluI | AGCT | 5 cut(s) | 142, 296, 416, 803, 1262 |
| Alw21I | GWGCWC | 2 cut(s) | 144, 1098 |
| Alw26I | GTCTC | 4 cut(s) | 187, 586, 669, 1044 |
| AoxI | GGCC | 4 cut(s) | 187, 456, 613, 988 |
| ApeKI | GCWGC | 1 cut(s) | 800 |
| ApoI | RAATTY | 3 cut(s) | 917, 1061, 1439 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 768, 800 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 887, 1558 |
| AspLEI | GCGC | 1 cut(s) | 486 |
| AspS9I | GGNCC | 2 cut(s) | 302, 817 |
| AsuC2I | CCSGG | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 3 cut(s) | 58, 257, 804 |
| AsuII | TTCGAA | 2 cut(s) | 473, 787 |
| AsuNHI | GCTAGC | 1 cut(s) | 1262 |
| AvaII | GGWCC | 2 cut(s) | 302, 817 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 713, 746 |
| BalI | TGGCCA | 1 cut(s) | 458 |
| BanII | GRGCYC | 1 cut(s) | 144 |
| BbsI | GAAGAC | 3 cut(s) | 761, 890, 1635 |
| Bbv12I | GWGCWC | 2 cut(s) | 144, 1098 |
| BbvI | GCAGC | 1 cut(s) | 812 |
| BccI | CCATC | 2 cut(s) | 1477, 1519 |
| BceAI | ACGGC | 4 cut(s) | 150, 202, 628, 861 |
| BciT130I | CCWGG | 3 cut(s) | 77, 672, 1047 |
| BcnI | CCSGG | 1 cut(s) | 60 |
| BcoDI | GTCTC | 4 cut(s) | 187, 586, 669, 1044 |
| BfaI | CTAG | 3 cut(s) | 440, 1143, 1263 |
| BfrI | CTTAAG | 1 cut(s) | 1646 |
| BglII | AGATCT | 1 cut(s) | 1123 |
| BisI | GCNGC | 1 cut(s) | 801 |
| BlpI | GCTNAGC | 1 cut(s) | 138 |
| BlsI | GCNGC | 1 cut(s) | 802 |
| BmcAI | AGTACT | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 4 cut(s) | 60, 77, 672, 1047 |
| Bme18I | GGWCC | 2 cut(s) | 302, 817 |
| BmgT120I | GGNCC | 2 cut(s) | 302, 817 |
| BmrFI | CCNGG | 4 cut(s) | 60, 77, 672, 1047 |
| BmsI | GCATC | 3 cut(s) | 142, 164, 1489 |
| BmtI | GCTAGC | 1 cut(s) | 1266 |
| BpiI | GAAGAC | 3 cut(s) | 761, 890, 1635 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1041, 1073, 1355, 1387 |
| BpmI | CTGGAG | 3 cut(s) | 658, 693, 1082 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 138 |
| Bpu14I | TTCGAA | 2 cut(s) | 473, 787 |
| BpuEI | CTTGAG | 1 cut(s) | 610 |
| BpuMI | CCSGG | 1 cut(s) | 60 |
| BsaWI | WCCGGW | 1 cut(s) | 814 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 219, 249, 264, 294, 1080, 1110 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 346 |
| Bse118I | RCCGGY | 2 cut(s) | 615, 990 |
| Bse1I | ACTGG | 1 cut(s) | 1099 |
| Bse3DI | GCAATG | 1 cut(s) | 1153 |
| BseBI | CCWGG | 3 cut(s) | 77, 672, 1047 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 346 |
| BseMI | GCAATG | 1 cut(s) | 1153 |
| BseMII | CTCAG | 3 cut(s) | 129, 157, 408 |
| BseNI | ACTGG | 1 cut(s) | 1099 |
| BseX3I | CGGCCG | 2 cut(s) | 187, 613 |
| BseXI | GCAGC | 1 cut(s) | 812 |
| BsgI | GTGCAG | 1 cut(s) | 408 |
| Bsh1236I | CGCG | 2 cut(s) | 486, 597 |
| Bsh1285I | CGRYCG | 2 cut(s) | 190, 616 |
| BshFI | GGCC | 4 cut(s) | 189, 458, 615, 990 |
| BsiEI | CGRYCG | 2 cut(s) | 190, 616 |
| BsiHKAI | GWGCWC | 2 cut(s) | 144, 1098 |
| BsiSI | CCGG | 5 cut(s) | 60, 190, 616, 815, 991 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 346 |
| BsmAI | GTCTC | 4 cut(s) | 187, 586, 669, 1044 |
| BsmBI | CGTCTC | 2 cut(s) | 586, 669 |
| BsmI | GAATGC | 1 cut(s) | 686 |
| BsnI | GGCC | 4 cut(s) | 189, 458, 615, 990 |
| Bsp119I | TTCGAA | 2 cut(s) | 473, 787 |
| Bsp1286I | GDGCHC | 2 cut(s) | 144, 1098 |
| Bsp143I | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 138 |
| BspACI | CCGC | 2 cut(s) | 1450, 1469 |
| BspANI | GGCC | 4 cut(s) | 189, 458, 615, 990 |
| BspCNI | CTCAG | 3 cut(s) | 130, 156, 409 |
| BspFNI | CGCG | 2 cut(s) | 486, 597 |
| BspHI | TCATGA | 1 cut(s) | 1443 |
| BspOI | GCTAGC | 1 cut(s) | 1266 |
| BspT104I | TTCGAA | 2 cut(s) | 473, 787 |
| BspTI | CTTAAG | 1 cut(s) | 1646 |
| BsrDI | GCAATG | 1 cut(s) | 1153 |
| BsrFI | RCCGGY | 2 cut(s) | 615, 990 |
| BsrI | ACTGG | 1 cut(s) | 1099 |
| BssAI | RCCGGY | 2 cut(s) | 615, 990 |
| BssMI | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| Bst2UI | CCWGG | 3 cut(s) | 77, 672, 1047 |
| Bst4CI | ACNGT | 7 cut(s) | 463, 726, 841, 873, 1118, 1244, 1636 |
| Bst6I | CTCTTC | 7 cut(s) | 339, 625, 936, 1284, 1356, 1549, 1647 |
| BstAFI | CTTAAG | 1 cut(s) | 1646 |
| BstBI | TTCGAA | 2 cut(s) | 473, 787 |
| BstC8I | GCNNGC | 1 cut(s) | 1264 |
| BstDEI | CTNAG | 5 cut(s) | 109, 138, 143, 417, 857 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 344 |
| BstFNI | CGCG | 2 cut(s) | 486, 597 |
| BstHHI | GCGC | 1 cut(s) | 486 |
| BstKTI | GATC | 5 cut(s) | 30, 149, 235, 1126, 1536 |
| BstMAI | GTCTC | 4 cut(s) | 187, 586, 669, 1044 |
| BstMBI | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| BstMCI | CGRYCG | 2 cut(s) | 190, 616 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 422 |
| BstNI | CCWGG | 3 cut(s) | 77, 672, 1047 |
| BstSCI | CCNGG | 4 cut(s) | 58, 75, 670, 1045 |
| BstUI | CGCG | 2 cut(s) | 486, 597 |
| BstV1I | GCAGC | 1 cut(s) | 812 |
| BstV2I | GAAGAC | 3 cut(s) | 761, 890, 1635 |
| BstX2I | RGATCY | 1 cut(s) | 1123 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 76 |
| BstYI | RGATCY | 1 cut(s) | 1123 |
| BstZI | CGGCCG | 2 cut(s) | 187, 613 |
| BsuRI | GGCC | 4 cut(s) | 189, 458, 615, 990 |
| BtsIMutI | CAGTG | 3 cut(s) | 459, 837, 1123 |
| Cac8I | GCNNGC | 1 cut(s) | 1264 |
| CciI | TCATGA | 1 cut(s) | 1443 |
| CfoI | GCGC | 1 cut(s) | 486 |
| Cfr10I | RCCGGY | 2 cut(s) | 615, 990 |
| Cfr13I | GGNCC | 2 cut(s) | 302, 817 |
| CseI | GACGC | 1 cut(s) | 603 |
| Csp6I | GTAC | 3 cut(s) | 106, 372, 1512 |
| CviQI | GTAC | 3 cut(s) | 106, 372, 1512 |
| DdeI | CTNAG | 5 cut(s) | 109, 138, 143, 417, 857 |
| DpnI | GATC | 5 cut(s) | 29, 148, 234, 1125, 1535 |
| DpnII | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| DraI | TTTAAA | 2 cut(s) | 1173, 1258 |
| EaeI | YGGCCR | 3 cut(s) | 187, 456, 613 |
| EagI | CGGCCG | 2 cut(s) | 187, 613 |
| Eam1104I | CTCTTC | 7 cut(s) | 339, 625, 936, 1284, 1356, 1549, 1647 |
| EarI | CTCTTC | 7 cut(s) | 339, 625, 936, 1284, 1356, 1549, 1647 |
| Ecl136II | GAGCTC | 1 cut(s) | 142 |
| EclXI | CGGCCG | 2 cut(s) | 187, 613 |
| Eco24I | GRGCYC | 1 cut(s) | 144 |
| Eco47I | GGWCC | 2 cut(s) | 302, 817 |
| Eco52I | CGGCCG | 2 cut(s) | 187, 613 |
| Eco53kI | GAGCTC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 1 cut(s) | 746 |
| EcoICRI | GAGCTC | 1 cut(s) | 142 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 344 |
| EcoRI | GAATTC | 1 cut(s) | 1439 |
| EcoRII | CCWGG | 3 cut(s) | 75, 670, 1045 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| EcoT38I | GRGCYC | 1 cut(s) | 144 |
| Esp3I | CGTCTC | 2 cut(s) | 586, 669 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 324, 356, 572, 604, 1179, 1211, 1263, 1295 |
| FauI | CCCGC | 1 cut(s) | 1462 |
| Fnu4HI | GCNGC | 1 cut(s) | 801 |
| FriOI | GRGCYC | 1 cut(s) | 144 |
| Fsp4HI | GCNGC | 1 cut(s) | 801 |
| FspBI | CTAG | 3 cut(s) | 440, 1143, 1263 |
| GlaI | GCGC | 1 cut(s) | 485 |
| GluI | GCNGC | 1 cut(s) | 801 |
| GsuI | CTGGAG | 3 cut(s) | 658, 693, 1082 |
| HaeIII | GGCC | 4 cut(s) | 189, 458, 615, 990 |
| HapII | CCGG | 5 cut(s) | 60, 190, 616, 815, 991 |
| HgaI | GACGC | 1 cut(s) | 603 |
| HhaI | GCGC | 1 cut(s) | 486 |
| Hin6I | GCGC | 1 cut(s) | 484 |
| HinP1I | GCGC | 1 cut(s) | 484 |
| HpaII | CCGG | 5 cut(s) | 60, 190, 616, 815, 991 |
| HphI | GGTGA | 3 cut(s) | 58, 257, 804 |
| Hpy166II | GTNNAC | 3 cut(s) | 1240, 1328, 1421 |
| Hpy188III | TCNNGA | 2 cut(s) | 100, 1444 |
| Hpy8I | GTNNAC | 3 cut(s) | 1240, 1328, 1421 |
| HpyAV | CCTTC | 3 cut(s) | 263, 560, 816 |
| HpyCH4III | ACNGT | 7 cut(s) | 463, 726, 841, 873, 1118, 1244, 1636 |
| HpyCH4IV | ACGT | 3 cut(s) | 123, 678, 887 |
| HpyCH4V | TGCA | 5 cut(s) | 155, 425, 515, 686, 1502 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 422 |
| HpyF3I | CTNAG | 5 cut(s) | 109, 138, 143, 417, 857 |
| HpySE526I | ACGT | 3 cut(s) | 123, 678, 887 |
| HspAI | GCGC | 1 cut(s) | 484 |
| Kzo9I | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| LmnI | GCTCC | 2 cut(s) | 808, 1101 |
| Lsp1109I | GCAGC | 1 cut(s) | 812 |
| LweI | GCATC | 3 cut(s) | 142, 164, 1489 |
| MaeI | CTAG | 3 cut(s) | 440, 1143, 1263 |
| MaeII | ACGT | 3 cut(s) | 123, 678, 887 |
| MaeIII | GTNAC | 7 cut(s) | 245, 289, 463, 841, 1104, 1177, 1393 |
| MalI | GATC | 5 cut(s) | 29, 148, 234, 1125, 1535 |
| MboI | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| MflI | RGATCY | 1 cut(s) | 1123 |
| MhlI | GDGCHC | 2 cut(s) | 144, 1098 |
| MlsI | TGGCCA | 1 cut(s) | 458 |
| MluCI | AATT | 9 cut(s) | 38, 354, 433, 607, 692, 917, 1061, 1067, 1439 |
| MluNI | TGGCCA | 1 cut(s) | 458 |
| MlyI | GAGTC | 6 cut(s) | 189, 409, 428, 775, 1244, 1610 |
| MmeI | TCCRAC | 2 cut(s) | 70, 992 |
| MnlI | CCTC | 9 cut(s) | 340, 592, 626, 937, 970, 1001, 1550, 1570, 1650 |
| Mox20I | TGGCCA | 1 cut(s) | 458 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MroXI | GAANNNNTTC | 2 cut(s) | 887, 1558 |
| MscI | TGGCCA | 1 cut(s) | 458 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| Msp20I | TGGCCA | 1 cut(s) | 458 |
| MspCI | CTTAAG | 1 cut(s) | 1646 |
| MspI | CCGG | 5 cut(s) | 60, 190, 616, 815, 991 |
| MspR9I | CCNGG | 4 cut(s) | 60, 77, 672, 1047 |
| Mva1269I | GAATGC | 1 cut(s) | 686 |
| MvaI | CCWGG | 3 cut(s) | 77, 672, 1047 |
| MvnI | CGCG | 2 cut(s) | 486, 597 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 422 |
| NciI | CCSGG | 1 cut(s) | 60 |
| NdeII | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| NheI | GCTAGC | 1 cut(s) | 1262 |
| NmeAIII | GCCGAG | 1 cut(s) | 887 |
| NmuCI | GTSAC | 5 cut(s) | 245, 289, 463, 841, 1393 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| NspV | TTCGAA | 2 cut(s) | 473, 787 |
| PagI | TCATGA | 1 cut(s) | 1443 |
| PctI | GAATGC | 1 cut(s) | 686 |
| PdmI | GAANNNNTTC | 2 cut(s) | 887, 1558 |
| PfeI | GAWTC | 8 cut(s) | 319, 443, 475, 572, 784, 950, 1020, 1458 |
| PkrI | GCNGC | 1 cut(s) | 802 |
| PleI | GAGTC | 6 cut(s) | 189, 408, 427, 774, 1244, 1609 |
| PpsI | GAGTC | 6 cut(s) | 189, 408, 427, 774, 1244, 1609 |
| Psp124BI | GAGCTC | 1 cut(s) | 144 |
| Psp6I | CCWGG | 3 cut(s) | 75, 670, 1045 |
| PspGI | CCWGG | 3 cut(s) | 75, 670, 1045 |
| PspPI | GGNCC | 2 cut(s) | 302, 817 |
| PsuI | RGATCY | 1 cut(s) | 1123 |
| RsaI | GTAC | 3 cut(s) | 107, 373, 1513 |
| RsaNI | GTAC | 3 cut(s) | 106, 372, 1512 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SacI | GAGCTC | 1 cut(s) | 144 |
| SatI | GCNGC | 1 cut(s) | 801 |
| Sau3AI | GATC | 5 cut(s) | 27, 146, 232, 1123, 1533 |
| Sau96I | GGNCC | 2 cut(s) | 302, 817 |
| ScaI | AGTACT | 1 cut(s) | 107 |
| SchI | GAGTC | 6 cut(s) | 189, 409, 428, 775, 1244, 1610 |
| ScrFI | CCNGG | 4 cut(s) | 60, 77, 672, 1047 |
| SduI | GDGCHC | 2 cut(s) | 144, 1098 |
| SfaNI | GCATC | 3 cut(s) | 142, 164, 1489 |
| SfuI | TTCGAA | 2 cut(s) | 473, 787 |
| SinI | GGWCC | 2 cut(s) | 302, 817 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| SmlI | CTYRAG | 2 cut(s) | 589, 1646 |
| SmoI | CTYRAG | 2 cut(s) | 589, 1646 |
| Sse9I | AATT | 9 cut(s) | 38, 354, 433, 607, 692, 917, 1061, 1067, 1439 |
| SsiI | CCGC | 2 cut(s) | 1450, 1469 |
| SspMI | CTAG | 3 cut(s) | 440, 1143, 1263 |
| SstI | GAGCTC | 1 cut(s) | 144 |
| StyD4I | CCNGG | 4 cut(s) | 58, 75, 670, 1045 |
| TaaI | ACNGT | 7 cut(s) | 463, 726, 841, 873, 1118, 1244, 1636 |
| TaiI | ACGT | 3 cut(s) | 126, 681, 890 |
| TaqI | TCGA | 2 cut(s) | 473, 787 |
| TasI | AATT | 9 cut(s) | 38, 354, 433, 607, 692, 917, 1061, 1067, 1439 |
| TatI | WGTACW | 1 cut(s) | 105 |
| TfiI | GAWTC | 8 cut(s) | 319, 443, 475, 572, 784, 950, 1020, 1458 |
| TscAI | CASTG | 3 cut(s) | 466, 844, 1123 |
| TseFI | GTSAC | 5 cut(s) | 245, 289, 463, 841, 1393 |
| TseI | GCWGC | 1 cut(s) | 800 |
| Tsp45I | GTSAC | 5 cut(s) | 245, 289, 463, 841, 1393 |
| TspGWI | ACGGA | 3 cut(s) | 342, 389, 1422 |
| TspRI | CASTG | 3 cut(s) | 466, 844, 1123 |
| Vha464I | CTTAAG | 1 cut(s) | 1646 |
| VpaK11BI | GGWCC | 2 cut(s) | 302, 817 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 344 |
| XapI | RAATTY | 3 cut(s) | 917, 1061, 1439 |
| XmnI | GAANNNNTTC | 2 cut(s) | 887, 1558 |
| XspI | CTAG | 3 cut(s) | 440, 1143, 1263 |
| ZrmI | AGTACT | 1 cut(s) | 107 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |