Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Reverse (-)

13451991 .. 13452908

Gene Structure 918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 768 bp

ATGTTTTCTTCCTCTGTATCCATCTCTATCTTGGTCGTGGTGGCCATGCAATTCTCTTTTATCCACAATGTTTTGTCCCTAAATCAGACCAATTCGTATCTGCAACACATATGCATCAACAGTGAAGGAAAATACAAGGCAAAGAATTCATACGAGAGCAGACTCAAAGATCATCTCGACAGTATGTCTAACATTCTAGACTACGGTTTCATCCACGGTGTTGGTGGTGCGGATTCTAGTACCTACTACATCAAGGCCCAATGTCGGGGAGATGCCTCCGAATCCAAGTGCCGCTCTTGCCTCTTTACCGCCTTCTCTGGGATTCTTAGGAGATGTCCGAACAACAGAGGGAGAATAATATGGTACGACAACTGTTTTCTCTACATTTCCGAGATATATACCTACGAGAAGATTGATTTCAAGCACTATTTGTATTTGCACAATGCCAAAGATGTGAGCGGCAATAAAAAGTTGTTCAACAAGAACACAAAGGCTCTCCTAGATAAGCTCAAGGAGAAAGCAATTCGTAAAGAACAAGAGCCTTACACAAGAGACTACATGTATGCAGCGGGGGAGGAAAGTCTCGGGACGACGAAATTGTATGGGATGATGCAGTGTACACAAGACTTATCAGTTAAAAATTGCAGTGTGTGTTTGGATTCGATTATTGCAAAGCTTCCCAGATGCTGCAACGGTAAACAAGGAGGAAGAGTTTTGAATCCGAGTTGTACTTTTAGGTACGAGCTCTATCCTTTTGTAAAACCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

255

Amino Acids

29.14

Weight (kDa)

9.02

Isoelectric Point (pI)

46.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	38 - 130	8.6e-20	Salt stress response/antifungal
Stress-antifung	PF01657	155 - 249	1.3e-14	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	294, 459
AciI	CCGC	5 cut(s)	230, 292, 309, 459, 569
AcoI	YGGCCR	1 cut(s)	42
AcsI	RAATTY	1 cut(s)	145
AfaI	GTAC	5 cut(s)	241, 365, 619, 730, 740
AfiI	CCNNNNNNNGG	3 cut(s)	264, 265, 318
AflIII	ACRYGT	1 cut(s)	558
AgsI	TTSAA	3 cut(s)	421, 478, 718
AhdI	GACNNNNNGTC	1 cut(s)	184
AluBI	AGCT	3 cut(s)	508, 676, 745
AluI	AGCT	3 cut(s)	508, 676, 745
Alw21I	GWGCWC	1 cut(s)	747
Alw26I	GTCTC	2 cut(s)	546, 587
AlwNI	CAGNNNCTG	1 cut(s)	687
Ama87I	CYCGRG	1 cut(s)	584
AoxI	GGCC	2 cut(s)	42, 255
ApeKI	GCWGC	2 cut(s)	566, 687
ApoI	RAATTY	1 cut(s)	145
AspS9I	GGNCC	1 cut(s)	256
AvaI	CYCGRG	1 cut(s)	584
BalI	TGGCCA	1 cut(s)	44
BanII	GRGCYC	1 cut(s)	747
Bbv12I	GWGCWC	1 cut(s)	747
BbvI	GCAGC	2 cut(s)	578, 674
BccI	CCATC	1 cut(s)	29
BciVI	GTATCC	1 cut(s)	28
BcoDI	GTCTC	2 cut(s)	546, 587
BfaI	CTAG	3 cut(s)	197, 237, 500
BfuI	GTATCC	1 cut(s)	28
BisI	GCNGC	4 cut(s)	292, 460, 567, 688
BlsI	GCNGC	4 cut(s)	293, 461, 568, 689
BmeRI	GACNNNNNGTC	1 cut(s)	184
BmeT110I	CYCGRG	1 cut(s)	584
BmgT120I	GGNCC	1 cut(s)	256
BmsI	GCATC	4 cut(s)	123, 262, 600, 674
BpuEI	CTTGAG	1 cut(s)	494
BsaJI	CCNNGG	1 cut(s)	214
BsaXI	ACNNNNNCTCC	2 cut(s)	696, 726
Bsc4I	CCNNNNNNNGG	3 cut(s)	264, 265, 318
BseDI	CCNNGG	1 cut(s)	214
BseGI	GGATG	2 cut(s)	210, 612
BseLI	CCNNNNNNNGG	3 cut(s)	264, 265, 318
BseXI	GCAGC	2 cut(s)	578, 674
BshFI	GGCC	2 cut(s)	44, 257
BsiHKAI	GWGCWC	1 cut(s)	747
BsiHKCI	CYCGRG	1 cut(s)	584
BslFI	GGGAC	2 cut(s)	61, 601
BslI	CCNNNNNNNGG	3 cut(s)	264, 265, 318
BsmAI	GTCTC	2 cut(s)	546, 587
BsmFI	GGGAC	2 cut(s)	61, 601
BsnI	GGCC	2 cut(s)	44, 257
BsoBI	CYCGRG	1 cut(s)	584
Bsp1286I	GDGCHC	1 cut(s)	747
Bsp1407I	TGTACA	1 cut(s)	617
Bsp143I	GATC	1 cut(s)	169
BspACI	CCGC	5 cut(s)	230, 292, 309, 459, 569
BspANI	GGCC	2 cut(s)	44, 257
BsrBI	CCGCTC	2 cut(s)	294, 459
BsrGI	TGTACA	1 cut(s)	617
BssECI	CCNNGG	1 cut(s)	214
BssMI	GATC	1 cut(s)	169
Bst4CI	ACNGT	7 cut(s)	122, 182, 206, 218, 374, 695, 765
Bst6I	CTCTTC	1 cut(s)	703
BstAUI	TGTACA	1 cut(s)	617
BstDEI	CTNAG	1 cut(s)	326
BstDSI	CCRYGG	1 cut(s)	214
BstF5I	GGATG	2 cut(s)	210, 612
BstKTI	GATC	1 cut(s)	172
BstMAI	GTCTC	2 cut(s)	546, 587
BstMBI	GATC	1 cut(s)	169
BstMWI	GCNNNNNNNGC	1 cut(s)	297
BstNSI	RCATGY	1 cut(s)	562
BstV1I	GCAGC	2 cut(s)	578, 674
BstXI	CCANNNNNNTGG	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	28
BsuRI	GGCC	2 cut(s)	44, 257
BtgI	CCRYGG	1 cut(s)	214
BtsCI	GGATG	2 cut(s)	210, 612
BtsI	GCAGTG	2 cut(s)	620, 652
BtsIMutI	CAGTG	3 cut(s)	127, 620, 652
CaiI	CAGNNNCTG	1 cut(s)	687
Cfr13I	GGNCC	1 cut(s)	256
Csp6I	GTAC	5 cut(s)	240, 364, 618, 729, 739
CviAII	CATG	2 cut(s)	46, 559
CviJI	RGCY	7 cut(s)	44, 257, 494, 508, 541, 676, 745
CviKI_1	RGCY	7 cut(s)	44, 257, 494, 508, 541, 676, 745
CviQI	GTAC	5 cut(s)	240, 364, 618, 729, 739
DdeI	CTNAG	1 cut(s)	326
DpnI	GATC	1 cut(s)	171
DpnII	GATC	1 cut(s)	169
DriI	GACNNNNNGTC	1 cut(s)	184
EaeI	YGGCCR	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	703
Eam1105I	GACNNNNNGTC	1 cut(s)	184
EarI	CTCTTC	1 cut(s)	703
Ecl136II	GAGCTC	1 cut(s)	745
Eco24I	GRGCYC	1 cut(s)	747
Eco53kI	GAGCTC	1 cut(s)	745
Eco88I	CYCGRG	1 cut(s)	584
EcoICRI	GAGCTC	1 cut(s)	745
EcoRI	GAATTC	1 cut(s)	145
EcoT22I	ATGCAT	1 cut(s)	116
EcoT38I	GRGCYC	1 cut(s)	747
FaeI	CATG	2 cut(s)	49, 562
FaqI	GGGAC	2 cut(s)	61, 601
FatI	CATG	2 cut(s)	45, 558
FauI	CCCGC	1 cut(s)	562
FauNDI	CATATG	1 cut(s)	110
Fnu4HI	GCNGC	4 cut(s)	292, 460, 567, 688
FokI	GGATG	2 cut(s)	197, 619
FriOI	GRGCYC	1 cut(s)	747
Fsp4HI	GCNGC	4 cut(s)	292, 460, 567, 688
FspBI	CTAG	3 cut(s)	197, 237, 500
GluI	GCNGC	4 cut(s)	292, 460, 567, 688
HaeIII	GGCC	2 cut(s)	44, 257
Hin1II	CATG	2 cut(s)	49, 562
HindIII	AAGCTT	1 cut(s)	674
HinfI	GANTC	6 cut(s)	162, 233, 281, 322, 659, 718
Hpy166II	GTNNAC	3 cut(s)	618, 620, 698
Hpy188I	TCNGA	5 cut(s)	87, 280, 339, 391, 723
Hpy188III	TCNNGA	3 cut(s)	176, 197, 586
Hpy8I	GTNNAC	3 cut(s)	618, 620, 698
Hpy99I	CGWCG	1 cut(s)	595
HpyAV	CCTTC	2 cut(s)	119, 322
HpyCH4III	ACNGT	7 cut(s)	122, 182, 206, 218, 374, 695, 765
HpyCH4V	TGCA	9 cut(s)	49, 103, 114, 439, 566, 613, 645, 671, 690
HpyF10VI	GCNNNNNNNGC	1 cut(s)	297
HpyF3I	CTNAG	1 cut(s)	326
Hsp92II	CATG	2 cut(s)	49, 562
Kzo9I	GATC	1 cut(s)	169
LpnPI	CCDG	2 cut(s)	303, 694
Lsp1109I	GCAGC	2 cut(s)	578, 674
LweI	GCATC	4 cut(s)	123, 262, 600, 674
MaeI	CTAG	3 cut(s)	197, 237, 500
MalI	GATC	1 cut(s)	171
MbiI	CCGCTC	2 cut(s)	294, 459
MboI	GATC	1 cut(s)	169
MboII	GAAGA	2 cut(s)	421, 720
MhlI	GDGCHC	1 cut(s)	747
MlsI	TGGCCA	1 cut(s)	44
MluCI	AATT	6 cut(s)	50, 91, 145, 522, 596, 640
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	1 cut(s)	156
MnlI	CCTC	6 cut(s)	22, 286, 311, 341, 568, 698
Mox20I	TGGCCA	1 cut(s)	44
Mph1103I	ATGCAT	1 cut(s)	116
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	1 cut(s)	636
Msp20I	TGGCCA	1 cut(s)	44
MspA1I	CMGCKG	1 cut(s)	569
MwoI	GCNNNNNNNGC	1 cut(s)	297
NdeI	CATATG	1 cut(s)	110
NdeII	GATC	1 cut(s)	169
NlaIII	CATG	2 cut(s)	49, 562
NsiI	ATGCAT	1 cut(s)	116
NspI	RCATGY	1 cut(s)	562
PciI	ACATGT	1 cut(s)	558
PfeI	GAWTC	5 cut(s)	233, 281, 322, 659, 718
PkrI	GCNGC	4 cut(s)	293, 461, 568, 689
PleI	GAGTC	1 cut(s)	156
PpsI	GAGTC	1 cut(s)	156
PscI	ACATGT	1 cut(s)	558
Psp124BI	GAGCTC	1 cut(s)	747
PspPI	GGNCC	1 cut(s)	256
PstNI	CAGNNNCTG	1 cut(s)	687
RsaI	GTAC	5 cut(s)	241, 365, 619, 730, 740
RsaNI	GTAC	5 cut(s)	240, 364, 618, 729, 739
SacI	GAGCTC	1 cut(s)	747
SaqAI	TTAA	1 cut(s)	636
SatI	GCNGC	4 cut(s)	292, 460, 567, 688
Sau3AI	GATC	1 cut(s)	169
Sau96I	GGNCC	1 cut(s)	256
SchI	GAGTC	1 cut(s)	156
SduI	GDGCHC	1 cut(s)	747
SetI	ASST	6 cut(s)	245, 404, 510, 678, 740, 747
SfaNI	GCATC	4 cut(s)	123, 262, 600, 674
SmlI	CTYRAG	1 cut(s)	509
SmoI	CTYRAG	1 cut(s)	509
Sse9I	AATT	6 cut(s)	50, 91, 145, 522, 596, 640
SsiI	CCGC	5 cut(s)	230, 292, 309, 459, 569
SspMI	CTAG	3 cut(s)	197, 237, 500
SstI	GAGCTC	1 cut(s)	747
TaaI	ACNGT	7 cut(s)	122, 182, 206, 218, 374, 695, 765
TaqI	TCGA	2 cut(s)	177, 662
TasI	AATT	6 cut(s)	50, 91, 145, 522, 596, 640
TatI	WGTACW	2 cut(s)	617, 728
TauI	GCSGC	2 cut(s)	294, 462
TfiI	GAWTC	5 cut(s)	233, 281, 322, 659, 718
Tru1I	TTAA	1 cut(s)	636
Tru9I	TTAA	1 cut(s)	636
TscAI	CASTG	3 cut(s)	127, 620, 652
TseI	GCWGC	2 cut(s)	566, 687
TspDTI	ATGAA	2 cut(s)	138, 199
TspRI	CASTG	3 cut(s)	127, 620, 652
XapI	RAATTY	1 cut(s)	145
XbaI	TCTAGA	1 cut(s)	196
XceI	RCATGY	1 cut(s)	562
XcmI	CCANNNNNNNNNTGG	2 cut(s)	28, 221
XspI	CTAG	3 cut(s)	197, 237, 500
Zsp2I	ATGCAT	1 cut(s)	116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.