Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Forward (+)

7763968 .. 7765326

Gene Structure 1359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 777 bp

ATGTACTCTTCATATTCTCTATCAAAACGCCTCATTTATGTCCCTATCCTGGCCATCCAATTCCTCCTCGTACGCAGCGTTTCATCACTAAACCTTACCAATGAGTATCTTAACCACAAATGCTTCGTCAGTGAAGGGAAATATAAGCATGGTGATAAGTACGAGAATAACCTCAACGTTCTCAACAAGAATGTCCTTTCTTATGATCTTACTAGCGGTTTTCTACACGTTTCTCATGGCGAGGGTCCTGATTCCGTCACCATCATATTACAATGTCGTGGCGACTCCTTCGGGTCGAATTGCCGCTCTTGCTATACCACCGCCATCGACGGGTTTCATAGGAGATGTCAGAGAAACAAAGGGGGAATTATATGGTACGACCAATGTTTTCTTGTTATTTCTACGATCAAACCCCAACTCCCAAGGAAGATTGATTTCAAAAACACTTTCTCAATGCACAACCCAAACAACGTGAGCAGTGAACCAGGATCGTTTGACAAGATGACAAGGGATTTCCTCTACAAGCTGGTGCAGAAAGCCTCTTATCCAACCGTGGTCGAACACCAGTCTACATATTATGCTGCGGGGGAGAAAAAACTCGGGAAAAGGAAGCTGTATGCAATGATGCAGTGTGCATCGGACATATTGCAATGTAAGGTTTGTTTGGAATGGTGTATCAGAGAGCTTCCCAAGTGTTGTGATGGTAAACAAGGAGGGAGAATTTTGGGTATGAGTTGTAATCTTAGGTATGAGCTATACCCTTTTCTTCGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

258

Amino Acids

29.63

Weight (kDa)

9.21

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	41 - 134	1.6e-19	Salt stress response/antifungal
Stress-antifung	PF01657	158 - 252	5.3e-11	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	306
AccI	GTMKAC	1 cut(s)	569
AciI	CCGC	4 cut(s)	216, 304, 321, 584
AclI	AACGTT	1 cut(s)	177
AclWI	GGATC	1 cut(s)	496
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	1 cut(s)	720
AfaI	GTAC	4 cut(s)	5, 72, 161, 377
AfiI	CCNNNNNNNGG	2 cut(s)	49, 330
AflIII	ACRYGT	1 cut(s)	226
AgsI	TTSAA	1 cut(s)	439
AjnI	CCWGG	2 cut(s)	48, 484
AluBI	AGCT	4 cut(s)	526, 613, 685, 754
AluI	AGCT	4 cut(s)	526, 613, 685, 754
AlwI	GGATC	1 cut(s)	496
Ama87I	CYCGRG	1 cut(s)	599
AoxI	GGCC	1 cut(s)	51
ApeKI	GCWGC	2 cut(s)	75, 581
ApoI	RAATTY	1 cut(s)	720
ArsI	GACNNNNNNTTYG	2 cut(s)	111, 143
AspS9I	GGNCC	1 cut(s)	245
AsuHPI	GGTGA	2 cut(s)	164, 250
AvaI	CYCGRG	1 cut(s)	599
AvaII	GGWCC	1 cut(s)	245
BalI	TGGCCA	1 cut(s)	53
BbvI	GCAGC	2 cut(s)	87, 568
BccI	CCATC	4 cut(s)	62, 269, 332, 695
BciT130I	CCWGG	2 cut(s)	50, 486
BfaI	CTAG	1 cut(s)	213
BisI	GCNGC	3 cut(s)	76, 304, 582
BlsI	GCNGC	3 cut(s)	77, 305, 583
Bme1390I	CCNGG	2 cut(s)	50, 486
Bme18I	GGWCC	1 cut(s)	245
BmeT110I	CYCGRG	1 cut(s)	599
BmgT120I	GGNCC	1 cut(s)	245
BmiI	GGNNCC	1 cut(s)	246
BmrFI	CCNGG	2 cut(s)	50, 486
BmsI	GCATC	2 cut(s)	615, 644
BsaJI	CCNNGG	2 cut(s)	422, 552
BsaXI	ACNNNNNCTCC	2 cut(s)	402, 432
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 330
Bse1I	ACTGG	1 cut(s)	565
Bse3DI	GCAATG	2 cut(s)	627, 656
BseBI	CCWGG	2 cut(s)	50, 486
BseDI	CCNNGG	2 cut(s)	422, 552
BseGI	GGATG	1 cut(s)	54
BseLI	CCNNNNNNNGG	2 cut(s)	49, 330
BseMI	GCAATG	2 cut(s)	627, 656
BseNI	ACTGG	1 cut(s)	565
BseRI	GAGGAG	1 cut(s)	56
BseXI	GCAGC	2 cut(s)	87, 568
BsgI	GTGCAG	1 cut(s)	551
BshFI	GGCC	1 cut(s)	53
BsiHKCI	CYCGRG	1 cut(s)	599
BsiWI	CGTACG	1 cut(s)	70
BslFI	GGGAC	1 cut(s)	26
BslI	CCNNNNNNNGG	2 cut(s)	49, 330
BsmFI	GGGAC	1 cut(s)	26
BsnI	GGCC	1 cut(s)	53
BsoBI	CYCGRG	1 cut(s)	599
Bsp143I	GATC	3 cut(s)	205, 405, 488
BspACI	CCGC	4 cut(s)	216, 304, 321, 584
BspANI	GGCC	1 cut(s)	53
BspLI	GGNNCC	1 cut(s)	246
BspPI	GGATC	1 cut(s)	496
BsrBI	CCGCTC	1 cut(s)	306
BsrDI	GCAATG	2 cut(s)	627, 656
BsrI	ACTGG	1 cut(s)	565
BssECI	CCNNGG	2 cut(s)	422, 552
BssMI	GATC	3 cut(s)	205, 405, 488
BssT1I	CCWWGG	1 cut(s)	422
Bst2UI	CCWGG	2 cut(s)	50, 486
Bst4CI	ACNGT	1 cut(s)	553
Bst6I	CTCTTC	1 cut(s)	13
BstDEI	CTNAG	1 cut(s)	743
BstDSI	CCRYGG	1 cut(s)	552
BstF5I	GGATG	1 cut(s)	54
BstKTI	GATC	3 cut(s)	208, 408, 491
BstMBI	GATC	3 cut(s)	205, 405, 488
BstMWI	GCNNNNNNNGC	1 cut(s)	309
BstNI	CCWGG	2 cut(s)	50, 486
BstSCI	CCNGG	2 cut(s)	48, 484
BstV1I	GCAGC	2 cut(s)	87, 568
BsuRI	GGCC	1 cut(s)	53
BtgI	CCRYGG	1 cut(s)	552
BtsCI	GGATG	1 cut(s)	54
BtsI	GCAGTG	2 cut(s)	484, 635
BtsIMutI	CAGTG	3 cut(s)	136, 484, 635
Cfr13I	GGNCC	1 cut(s)	245
Csp6I	GTAC	4 cut(s)	4, 71, 160, 376
CviAII	CATG	2 cut(s)	149, 236
CviJI	RGCY	6 cut(s)	53, 526, 539, 613, 685, 754
CviKI_1	RGCY	6 cut(s)	53, 526, 539, 613, 685, 754
CviQI	GTAC	4 cut(s)	4, 71, 160, 376
DdeI	CTNAG	1 cut(s)	743
DpnI	GATC	3 cut(s)	207, 407, 490
DpnII	GATC	3 cut(s)	205, 405, 488
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	1 cut(s)	13
EarI	CTCTTC	1 cut(s)	13
Eco130I	CCWWGG	1 cut(s)	422
Eco47I	GGWCC	1 cut(s)	245
Eco88I	CYCGRG	1 cut(s)	599
EcoO109I	RGGNCCY	1 cut(s)	245
EcoRII	CCWGG	2 cut(s)	48, 484
EcoT14I	CCWWGG	1 cut(s)	422
ErhI	CCWWGG	1 cut(s)	422
FaeI	CATG	2 cut(s)	152, 239
FaqI	GGGAC	1 cut(s)	26
FatI	CATG	2 cut(s)	148, 235
FauI	CCCGC	1 cut(s)	577
FblI	GTMKAC	1 cut(s)	569
Fnu4HI	GCNGC	3 cut(s)	76, 304, 582
FokI	GGATG	1 cut(s)	41
Fsp4HI	GCNGC	3 cut(s)	76, 304, 582
FspBI	CTAG	1 cut(s)	213
GluI	GCNGC	3 cut(s)	76, 304, 582
HaeIII	GGCC	1 cut(s)	53
Hin1II	CATG	2 cut(s)	152, 239
HinfI	GANTC	2 cut(s)	251, 284
HphI	GGTGA	2 cut(s)	164, 250
Hpy166II	GTNNAC	3 cut(s)	482, 570, 707
Hpy188I	TCNGA	3 cut(s)	351, 640, 680
Hpy188III	TCNNGA	2 cut(s)	248, 601
Hpy8I	GTNNAC	3 cut(s)	482, 570, 707
Hpy99I	CGWCG	1 cut(s)	332
HpyAV	CCTTC	2 cut(s)	128, 298
HpyCH4III	ACNGT	1 cut(s)	553
HpyCH4IV	ACGT	3 cut(s)	177, 228, 471
HpyCH4V	TGCA	6 cut(s)	457, 532, 620, 628, 635, 649
HpyF10VI	GCNNNNNNNGC	1 cut(s)	309
HpyF3I	CTNAG	1 cut(s)	743
HpySE526I	ACGT	3 cut(s)	177, 228, 471
Hsp92II	CATG	2 cut(s)	152, 239
Kzo9I	GATC	3 cut(s)	205, 405, 488
LpnPI	CCDG	7 cut(s)	35, 62, 261, 471, 498, 512, 578
Lsp1109I	GCAGC	2 cut(s)	87, 568
LweI	GCATC	2 cut(s)	615, 644
MaeI	CTAG	1 cut(s)	213
MaeII	ACGT	3 cut(s)	177, 228, 471
MaeIII	GTNAC	1 cut(s)	256
MalI	GATC	3 cut(s)	207, 407, 490
MbiI	CCGCTC	1 cut(s)	306
MboI	GATC	3 cut(s)	205, 405, 488
MboII	GAAGA	2 cut(s)	439, 758
MlsI	TGGCCA	1 cut(s)	53
MluCI	AATT	4 cut(s)	59, 298, 366, 720
MluNI	TGGCCA	1 cut(s)	53
MlyI	GAGTC	1 cut(s)	278
MmeI	TCCRAC	1 cut(s)	572
MnlI	CCTC	8 cut(s)	41, 74, 77, 182, 235, 527, 550, 707
Mox20I	TGGCCA	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	53
MseI	TTAA	2 cut(s)	111, 775
Msp20I	TGGCCA	1 cut(s)	53
MspR9I	CCNGG	2 cut(s)	50, 486
MvaI	CCWGG	2 cut(s)	50, 486
MwoI	GCNNNNNNNGC	1 cut(s)	309
NdeII	GATC	3 cut(s)	205, 405, 488
NlaIII	CATG	2 cut(s)	152, 239
NlaIV	GGNNCC	1 cut(s)	246
NmuCI	GTSAC	1 cut(s)	256
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PfeI	GAWTC	1 cut(s)	251
Pfl23II	CGTACG	1 cut(s)	70
PkrI	GCNGC	3 cut(s)	77, 305, 583
PleI	GAGTC	1 cut(s)	278
PpsI	GAGTC	1 cut(s)	278
PpuMI	RGGWCCY	1 cut(s)	245
Psp1406I	AACGTT	1 cut(s)	177
Psp5II	RGGWCCY	1 cut(s)	245
Psp6I	CCWGG	2 cut(s)	48, 484
PspGI	CCWGG	2 cut(s)	48, 484
PspLI	CGTACG	1 cut(s)	70
PspN4I	GGNNCC	1 cut(s)	246
PspPI	GGNCC	1 cut(s)	245
PspPPI	RGGWCCY	1 cut(s)	245
RsaI	GTAC	4 cut(s)	5, 72, 161, 377
RsaNI	GTAC	4 cut(s)	4, 71, 160, 376
SaqAI	TTAA	2 cut(s)	111, 775
SatI	GCNGC	3 cut(s)	76, 304, 582
Sau3AI	GATC	3 cut(s)	205, 405, 488
Sau96I	GGNCC	1 cut(s)	245
SchI	GAGTC	1 cut(s)	278
ScrFI	CCNGG	2 cut(s)	50, 486
SfaNI	GCATC	2 cut(s)	615, 644
SinI	GGWCC	1 cut(s)	245
Sse9I	AATT	4 cut(s)	59, 298, 366, 720
SsiI	CCGC	4 cut(s)	216, 304, 321, 584
SspMI	CTAG	1 cut(s)	213
StyD4I	CCNGG	2 cut(s)	48, 484
StyI	CCWWGG	1 cut(s)	422
TaaI	ACNGT	1 cut(s)	553
TaiI	ACGT	3 cut(s)	180, 231, 474
TaqI	TCGA	3 cut(s)	296, 327, 558
TasI	AATT	4 cut(s)	59, 298, 366, 720
TatI	WGTACW	1 cut(s)	3
TauI	GCSGC	1 cut(s)	306
TfiI	GAWTC	1 cut(s)	251
Tru1I	TTAA	2 cut(s)	111, 775
Tru9I	TTAA	2 cut(s)	111, 775
TscAI	CASTG	3 cut(s)	136, 484, 635
TseFI	GTSAC	1 cut(s)	256
TseI	GCWGC	2 cut(s)	75, 581
Tsp45I	GTSAC	1 cut(s)	256
TspDTI	ATGAA	2 cut(s)	72, 326
TspGWI	ACGGA	1 cut(s)	244
TspRI	CASTG	3 cut(s)	136, 484, 635
VpaK11BI	GGWCC	1 cut(s)	245
XapI	RAATTY	1 cut(s)	720
XmiI	GTMKAC	1 cut(s)	569
XspI	CTAG	1 cut(s)	213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.