Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Forward (+)

7754311 .. 7755762

Gene Structure 1452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGCACAATTCATATTCTTTATCAAAACGACTTGTTTTGGTCCTTTTCTTGGCCGTGGTGGCCACACAACTGTTCCTTATACGCAATGTTTCGTCCCTGAATCTGACCAATGCGTATCTGCACCACAAATGCCTCATCAGTCAAGGAAAGTATAAGCCAGGAAGTCAGTATGAGAAAAACCTTAACTCTCACATCGATTTGATTATTAACTCGACTTTTCGCAACGGATTTGGTCACATGACAACTGCTATGGGAAGTCCCAATATGGTAAACATCATATTCCAGTGCCGTGGAGACTCCTACCAGTCCAAGTGCCGCTCTTGCTTTGCCGCAGGCATTTCCGGGGAAATGAGATGTCCGAGAAACAAAGGTGGAATAATATGGTTCGACCAGTGTTTTGTCGAGATTACTGCAATCGAGGTCATGGAGGTGAATTACGATAACAATTTTTATATGCACAACCCGAACAAGGTAATGGGTGATGCAAAGTCTTTCAACAAGGAGACTATGGCTTTTCTAGAACAGCTGGCGTTGGAAGCAACCCGTAAAGACAACATGGAGGACGGCATGATGGCACTATACTCGGCCAGGGAGAAGATGGTTGGGACGAAGAAGCTGTACGCAATGGTTCAGTGTACGAGAGATGTATTCATGTTTAAGACAATGTGTAAGGAGTGTTTGGAAAGGATAATCAGCCAGTATCCCAAATGTTGCGACGGTAAACAAGGAGGGAGAGTTTTGGGTACAAGCTGTAACTTTAGATATGAGTTTTACCCTTTTCTTAGGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

263

Amino Acids

30.11

Weight (kDa)

9.02

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	44 - 136	2.1e-18	Salt stress response/antifungal
Stress-antifung	PF01657	160 - 257	4e-10	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	318
AciI	CCGC	2 cut(s)	316, 330
AcoI	YGGCCR	3 cut(s)	51, 60, 585
AfaI	GTAC	3 cut(s)	620, 637, 745
AfiI	CCNNNNNNNGG	2 cut(s)	49, 469
AgsI	TTSAA	1 cut(s)	496
AjnI	CCWGG	2 cut(s)	157, 587
AluBI	AGCT	3 cut(s)	526, 616, 750
AluI	AGCT	3 cut(s)	526, 616, 750
Alw26I	GTCTC	2 cut(s)	288, 497
AoxI	GGCC	3 cut(s)	51, 60, 585
ArsI	GACNNNNNNTTYG	2 cut(s)	380, 412
AspS9I	GGNCC	1 cut(s)	40
AsuC2I	CCSGG	1 cut(s)	343
AsuHPI	GGTGA	2 cut(s)	442, 491
AvaII	GGWCC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	62
BarI	GAAGNNNNNNTAC	2 cut(s)	602, 634
BccI	CCATC	2 cut(s)	565, 592
BceAI	ACGGC	3 cut(s)	38, 273, 580
BcgI	CGANNNNNNTGC	4 cut(s)	392, 426, 564, 598
BciT130I	CCWGG	2 cut(s)	159, 589
BciVI	GTATCC	1 cut(s)	711
BcnI	CCSGG	1 cut(s)	343
BcoDI	GTCTC	2 cut(s)	288, 497
BfaI	CTAG	1 cut(s)	518
BfuI	GTATCC	1 cut(s)	711
BglI	GCCNNNNNGGC	1 cut(s)	59
BisI	GCNGC	2 cut(s)	316, 330
BlsI	GCNGC	2 cut(s)	317, 331
Bme1390I	CCNGG	3 cut(s)	159, 343, 589
Bme18I	GGWCC	1 cut(s)	40
BmgT120I	GGNCC	1 cut(s)	40
BmrFI	CCNGG	3 cut(s)	159, 343, 589
BmsI	GCATC	1 cut(s)	472
BpuMI	CCSGG	1 cut(s)	343
Bsa29I	ATCGAT	1 cut(s)	195
BsaJI	CCNNGG	4 cut(s)	54, 289, 342, 588
BsaXI	ACNNNNNCTCC	2 cut(s)	720, 750
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 469
Bse1I	ACTGG	4 cut(s)	283, 304, 391, 697
Bse3DI	GCAATG	2 cut(s)	91, 630
BseBI	CCWGG	2 cut(s)	159, 589
BseCI	ATCGAT	1 cut(s)	195
BseDI	CCNNGG	4 cut(s)	54, 289, 342, 588
BseLI	CCNNNNNNNGG	2 cut(s)	49, 469
BseMI	GCAATG	2 cut(s)	91, 630
BseNI	ACTGG	4 cut(s)	283, 304, 391, 697
BsgI	GTGCAG	1 cut(s)	104
BshFI	GGCC	3 cut(s)	53, 62, 587
BshVI	ATCGAT	1 cut(s)	195
BsiSI	CCGG	1 cut(s)	342
BslFI	GGGAC	3 cut(s)	79, 243, 619
BslI	CCNNNNNNNGG	2 cut(s)	49, 469
BsmAI	GTCTC	2 cut(s)	288, 497
BsmFI	GGGAC	3 cut(s)	79, 243, 619
BsnI	GGCC	3 cut(s)	53, 62, 587
BspACI	CCGC	2 cut(s)	316, 330
BspANI	GGCC	3 cut(s)	53, 62, 587
BspDI	ATCGAT	1 cut(s)	195
BsrBI	CCGCTC	1 cut(s)	318
BsrDI	GCAATG	2 cut(s)	91, 630
BsrI	ACTGG	4 cut(s)	283, 304, 391, 697
BssECI	CCNNGG	4 cut(s)	54, 289, 342, 588
Bst2UI	CCWGG	2 cut(s)	159, 589
Bst4CI	ACNGT	2 cut(s)	72, 719
BstC8I	GCNNGC	2 cut(s)	334, 528
BstDEI	CTNAG	1 cut(s)	782
BstDSI	CCRYGG	2 cut(s)	54, 289
BstMAI	GTCTC	2 cut(s)	288, 497
BstMWI	GCNNNNNNNGC	3 cut(s)	59, 321, 536
BstNI	CCWGG	2 cut(s)	159, 589
BstSCI	CCNGG	3 cut(s)	157, 341, 587
BstXI	CCANNNNNNTGG	1 cut(s)	290
Bsu15I	ATCGAT	1 cut(s)	195
BsuI	GTATCC	1 cut(s)	711
BsuRI	GGCC	3 cut(s)	53, 62, 587
BsuTUI	ATCGAT	1 cut(s)	195
BtgI	CCRYGG	2 cut(s)	54, 289
BtsIMutI	CAGTG	3 cut(s)	290, 398, 638
Cac8I	GCNNGC	2 cut(s)	334, 528
Cfr13I	GGNCC	1 cut(s)	40
ClaI	ATCGAT	1 cut(s)	195
Csp6I	GTAC	3 cut(s)	619, 636, 744
CviAII	CATG	5 cut(s)	238, 424, 556, 568, 652
CviJI	RGCY	9 cut(s)	53, 62, 157, 512, 526, 587, 616, 696, 750
CviKI_1	RGCY	9 cut(s)	53, 62, 157, 512, 526, 587, 616, 696, 750
CviQI	GTAC	3 cut(s)	619, 636, 744
DdeI	CTNAG	1 cut(s)	782
EaeI	YGGCCR	3 cut(s)	51, 60, 585
Eco47I	GGWCC	1 cut(s)	40
EcoRII	CCWGG	2 cut(s)	157, 587
FaeI	CATG	5 cut(s)	241, 427, 559, 571, 655
FaqI	GGGAC	3 cut(s)	79, 243, 619
FatI	CATG	5 cut(s)	237, 423, 555, 567, 651
Fnu4HI	GCNGC	2 cut(s)	316, 330
Fsp4HI	GCNGC	2 cut(s)	316, 330
FspBI	CTAG	1 cut(s)	518
GluI	GCNGC	2 cut(s)	316, 330
HaeIII	GGCC	3 cut(s)	53, 62, 587
HapII	CCGG	1 cut(s)	342
Hin1II	CATG	5 cut(s)	241, 427, 559, 571, 655
HinfI	GANTC	2 cut(s)	100, 296
HpaII	CCGG	1 cut(s)	342
HphI	GGTGA	2 cut(s)	442, 491
Hpy166II	GTNNAC	3 cut(s)	271, 636, 722
Hpy188I	TCNGA	2 cut(s)	105, 360
Hpy188III	TCNNGA	2 cut(s)	403, 518
Hpy8I	GTNNAC	3 cut(s)	271, 636, 722
Hpy99I	CGWCG	1 cut(s)	719
HpyCH4III	ACNGT	2 cut(s)	72, 719
HpyCH4V	TGCA	5 cut(s)	4, 121, 413, 457, 485
HpyF10VI	GCNNNNNNNGC	3 cut(s)	59, 321, 536
HpyF3I	CTNAG	1 cut(s)	782
Hsp92II	CATG	5 cut(s)	241, 427, 559, 571, 655
LweI	GCATC	1 cut(s)	472
MaeI	CTAG	1 cut(s)	518
MaeIII	GTNAC	2 cut(s)	233, 752
MbiI	CCGCTC	1 cut(s)	318
MboII	GAAGA	2 cut(s)	607, 622
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	3 cut(s)	7, 433, 445
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	1 cut(s)	290
MmeI	TCCRAC	1 cut(s)	513
MnlI	CCTC	5 cut(s)	143, 412, 421, 553, 722
Mox20I	TGGCCA	1 cut(s)	62
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	4 cut(s)	183, 207, 657, 790
MslI	CAYNNNNRTG	1 cut(s)	428
Msp20I	TGGCCA	1 cut(s)	62
MspA1I	CMGCKG	1 cut(s)	526
MspI	CCGG	1 cut(s)	342
MspR9I	CCNGG	3 cut(s)	159, 343, 589
MvaI	CCWGG	2 cut(s)	159, 589
MwoI	GCNNNNNNNGC	3 cut(s)	59, 321, 536
NciI	CCSGG	1 cut(s)	343
NlaIII	CATG	5 cut(s)	241, 427, 559, 571, 655
NmeAIII	GCCGAG	1 cut(s)	563
NmuCI	GTSAC	1 cut(s)	233
PfeI	GAWTC	1 cut(s)	100
PkrI	GCNGC	2 cut(s)	317, 331
PleI	GAGTC	1 cut(s)	290
PpsI	GAGTC	1 cut(s)	290
Psp6I	CCWGG	2 cut(s)	157, 587
PspGI	CCWGG	2 cut(s)	157, 587
PspPI	GGNCC	1 cut(s)	40
PvuII	CAGCTG	1 cut(s)	526
RsaI	GTAC	3 cut(s)	620, 637, 745
RsaNI	GTAC	3 cut(s)	619, 636, 744
RseI	CAYNNNNRTG	1 cut(s)	428
SaqAI	TTAA	4 cut(s)	183, 207, 657, 790
SatI	GCNGC	2 cut(s)	316, 330
Sau96I	GGNCC	1 cut(s)	40
SchI	GAGTC	1 cut(s)	290
ScrFI	CCNGG	3 cut(s)	159, 343, 589
SetI	ASST	8 cut(s)	183, 373, 423, 432, 474, 528, 618, 752
SfaNI	GCATC	1 cut(s)	472
SfiI	GGCCNNNNNGGCC	1 cut(s)	59
SinI	GGWCC	1 cut(s)	40
SmiMI	CAYNNNNRTG	1 cut(s)	428
Sse9I	AATT	3 cut(s)	7, 433, 445
SsiI	CCGC	2 cut(s)	316, 330
SspMI	CTAG	1 cut(s)	518
StyD4I	CCNGG	3 cut(s)	157, 341, 587
TaaI	ACNGT	2 cut(s)	72, 719
TaqI	TCGA	5 cut(s)	195, 212, 387, 402, 417
TasI	AATT	3 cut(s)	7, 433, 445
TauI	GCSGC	2 cut(s)	318, 332
TfiI	GAWTC	1 cut(s)	100
Tru1I	TTAA	4 cut(s)	183, 207, 657, 790
Tru9I	TTAA	4 cut(s)	183, 207, 657, 790
TscAI	CASTG	3 cut(s)	290, 398, 638
TseFI	GTSAC	1 cut(s)	233
Tsp45I	GTSAC	1 cut(s)	233
TspDTI	ATGAA	1 cut(s)	640
TspGWI	ACGGA	1 cut(s)	240
TspRI	CASTG	3 cut(s)	290, 398, 638
VpaK11BI	GGWCC	1 cut(s)	40
XbaI	TCTAGA	1 cut(s)	517
XcmI	CCANNNNNNNNNTGG	1 cut(s)	595
XspI	CTAG	1 cut(s)	518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.