Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Forward (+)

7742250 .. 7743659

Gene Structure 1410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G21970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGTCTTCAAATATTTTTGGATCGGTCCCTATTTTGGTCGTGGTGGCTATACAACTTCTTCTTGTACACAATGTTTCTTCCCAGAACGTTACCAATGACTATTTGAACCACCAATGCAACAACACCCAAGGGAGATACACGCATGGGAGTACGTTTGAGAAGAACCTCAACCAAGTTCTTCATAACATCTCTAACCTCGATCTTAGATACGGTTACGCCTACGTCTCTAATGTTGTGGCTTACAAAGTTAGCAAGGATCCCAACATTGTCTTCGTTTTGCTCCAGTGCCGCGGTGACTCCTTTGGGTCCAAATGCCACTCCTGCCTCAGCACAGCCGTCTCTGGGCTTCGTGAGAGATGTCCAGGAAACAGAGGAGCAACAATATGGTACGACCAATGTCTTTTGGAGATTTCTTCGGTGGATTCCGAGGGGAGGATCCATTACAAACGTATGTTCTATATGCAAAACCCGACGAACGTCACCAACGATCCCAAACGGTTCGAAGATAAAAGAAGGGATCTCCTCCACAAGCTAATGCTGGAAGCCACCAAGGATAGCAAGGAAAACGGCGCCAAGGGACTGTTGTACGCAGTGGGTGAGATGAGGATTGGAAGAAATAAGATGTATGCAATGGTGCAGTGTACGCAAGACTTATGGCAGACTGGTTGCCATGTGTGTCTAGAATGGATTACGCAGATGAAATATGGAGAGTTCTTCTACCGTAAACCAGGAGGGAGAGTTTGTGGTAGGAGTTGTAGCTTTAGGTATGAGCTTTACCCTTTTCTTAGAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

264

Amino Acids

30.33

Weight (kDa)

9.15

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	38 - 138	1.8e-21	Salt stress response/antifungal
Stress-antifung	PF01657	159 - 258	6.6e-11	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	569
AccII	CGCG	1 cut(s)	291
AciI	CCGC	2 cut(s)	289, 291
AclI	AACGTT	1 cut(s)	87
AclWI	GGATC	7 cut(s)	28, 251, 264, 430, 443, 482, 525
AcyI	GRCGYC	1 cut(s)	570
AfaI	GTAC	5 cut(s)	66, 151, 389, 587, 643
AfiI	CCNNNNNNNGG	3 cut(s)	34, 342, 432
AgsI	TTSAA	2 cut(s)	9, 106
AjnI	CCWGG	2 cut(s)	361, 727
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AluBI	AGCT	3 cut(s)	532, 759, 772
AluI	AGCT	3 cut(s)	532, 759, 772
Alw26I	GTCTC	2 cut(s)	229, 343
AlwI	GGATC	7 cut(s)	28, 251, 264, 430, 443, 482, 525
AspLEI	GCGC	1 cut(s)	572
AspS9I	GGNCC	2 cut(s)	25, 306
AsuHPI	GGTGA	3 cut(s)	305, 472, 608
AsuII	TTCGAA	1 cut(s)	501
AvaII	GGWCC	2 cut(s)	25, 306
BamHI	GGATCC	2 cut(s)	256, 435
BanI	GGYRCC	1 cut(s)	569
BbsI	GAAGAC	1 cut(s)	262
BbvCI	CCTCAGC	1 cut(s)	326
BceAI	ACGGC	2 cut(s)	320, 583
BciT130I	CCWGG	2 cut(s)	363, 729
BcoDI	GTCTC	2 cut(s)	229, 343
BfaI	CTAG	1 cut(s)	680
BfoI	RGCGCY	1 cut(s)	573
BisI	GCNGC	1 cut(s)	289
BlsI	GCNGC	1 cut(s)	290
Bme1390I	CCNGG	2 cut(s)	363, 729
Bme18I	GGWCC	2 cut(s)	25, 306
BmgT120I	GGNCC	2 cut(s)	25, 306
BmiI	GGNNCC	5 cut(s)	27, 258, 307, 437, 571
BmrFI	CCNGG	2 cut(s)	363, 729
BoxI	GACNNNNGTC	2 cut(s)	396, 476
BpiI	GAAGAC	1 cut(s)	262
BpmI	CTGGAG	1 cut(s)	266
Bpu10I	CCTNAGC	1 cut(s)	326
Bpu14I	TTCGAA	1 cut(s)	501
BsaHI	GRCGYC	1 cut(s)	570
BsaJI	CCNNGG	5 cut(s)	127, 289, 426, 549, 573
BsaXI	ACNNNNNCTCC	4 cut(s)	723, 727, 753, 757
Bsc4I	CCNNNNNNNGG	3 cut(s)	34, 342, 432
Bse1I	ACTGG	2 cut(s)	283, 667
Bse3DI	GCAATG	1 cut(s)	636
BseBI	CCWGG	2 cut(s)	363, 729
BseDI	CCNNGG	5 cut(s)	127, 289, 426, 549, 573
BseLI	CCNNNNNNNGG	3 cut(s)	34, 342, 432
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	1 cut(s)	340
BseNI	ACTGG	2 cut(s)	283, 667
BseRI	GAGGAG	2 cut(s)	387, 512
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	1 cut(s)	291
BshNI	GGYRCC	1 cut(s)	569
BslFI	GGGAC	2 cut(s)	11, 591
BslI	CCNNNNNNNGG	3 cut(s)	34, 342, 432
BsmAI	GTCTC	2 cut(s)	229, 343
BsmBI	CGTCTC	2 cut(s)	229, 343
BsmFI	GGGAC	2 cut(s)	11, 591
Bsp119I	TTCGAA	1 cut(s)	501
Bsp1407I	TGTACA	1 cut(s)	64
Bsp143I	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
BspACI	CCGC	2 cut(s)	289, 291
BspCNI	CTCAG	1 cut(s)	339
BspFNI	CGCG	1 cut(s)	291
BspLI	GGNNCC	5 cut(s)	27, 258, 307, 437, 571
BspPI	GGATC	7 cut(s)	28, 251, 264, 430, 443, 482, 525
BspT104I	TTCGAA	1 cut(s)	501
BspT107I	GGYRCC	1 cut(s)	569
BsrDI	GCAATG	1 cut(s)	636
BsrGI	TGTACA	1 cut(s)	64
BsrI	ACTGG	2 cut(s)	283, 667
BssECI	CCNNGG	5 cut(s)	127, 289, 426, 549, 573
BssMI	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
BssNI	GRCGYC	1 cut(s)	570
BssT1I	CCWWGG	3 cut(s)	127, 549, 573
Bst2UI	CCWGG	2 cut(s)	363, 729
Bst4CI	ACNGT	4 cut(s)	212, 498, 582, 722
BstACI	GRCGYC	1 cut(s)	570
BstAUI	TGTACA	1 cut(s)	64
BstBI	TTCGAA	1 cut(s)	501
BstDEI	CTNAG	3 cut(s)	203, 326, 785
BstDSI	CCRYGG	1 cut(s)	289
BstFNI	CGCG	1 cut(s)	291
BstH2I	RGCGCY	1 cut(s)	573
BstHHI	GCGC	1 cut(s)	572
BstKTI	GATC	6 cut(s)	23, 202, 259, 438, 490, 520
BstMAI	GTCTC	2 cut(s)	229, 343
BstMBI	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
BstMWI	GCNNNNNNNGC	2 cut(s)	321, 643
BstNI	CCWGG	2 cut(s)	363, 729
BstPAI	GACNNNNGTC	2 cut(s)	396, 476
BstSCI	CCNGG	2 cut(s)	361, 727
BstUI	CGCG	1 cut(s)	291
BstV2I	GAAGAC	1 cut(s)	262
BstX2I	RGATCY	3 cut(s)	256, 435, 517
BstYI	RGATCY	3 cut(s)	256, 435, 517
BtgI	CCRYGG	1 cut(s)	289
BtsI	GCAGTG	2 cut(s)	597, 644
BtsIMutI	CAGTG	3 cut(s)	290, 597, 644
CfoI	GCGC	1 cut(s)	572
Cfr13I	GGNCC	2 cut(s)	25, 306
Cfr42I	CCGCGG	1 cut(s)	292
Csp6I	GTAC	5 cut(s)	65, 150, 388, 586, 642
CviAII	CATG	2 cut(s)	143, 671
CviJI	RGCY	8 cut(s)	47, 239, 335, 346, 532, 545, 759, 772
CviKI_1	RGCY	8 cut(s)	47, 239, 335, 346, 532, 545, 759, 772
CviQI	GTAC	5 cut(s)	65, 150, 388, 586, 642
DdeI	CTNAG	3 cut(s)	203, 326, 785
DinI	GGCGCC	1 cut(s)	571
DpnI	GATC	6 cut(s)	22, 201, 258, 437, 489, 519
DpnII	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
Eco130I	CCWWGG	3 cut(s)	127, 549, 573
Eco47I	GGWCC	2 cut(s)	25, 306
EcoRII	CCWGG	2 cut(s)	361, 727
EcoT14I	CCWWGG	3 cut(s)	127, 549, 573
EgeI	GGCGCC	1 cut(s)	571
EheI	GGCGCC	1 cut(s)	571
ErhI	CCWWGG	3 cut(s)	127, 549, 573
Esp3I	CGTCTC	2 cut(s)	229, 343
FaeI	CATG	2 cut(s)	146, 674
FaqI	GGGAC	2 cut(s)	11, 591
FatI	CATG	2 cut(s)	142, 670
Fnu4HI	GCNGC	1 cut(s)	289
Fsp4HI	GCNGC	1 cut(s)	289
FspBI	CTAG	1 cut(s)	680
GlaI	GCGC	1 cut(s)	571
GluI	GCNGC	1 cut(s)	289
GsuI	CTGGAG	1 cut(s)	266
HaeII	RGCGCY	1 cut(s)	573
HhaI	GCGC	1 cut(s)	572
Hin1I	GRCGYC	1 cut(s)	570
Hin1II	CATG	2 cut(s)	146, 674
Hin6I	GCGC	1 cut(s)	570
HinP1I	GCGC	1 cut(s)	570
HinfI	GANTC	2 cut(s)	296, 422
HphI	GGTGA	3 cut(s)	305, 472, 608
Hpy166II	GTNNAC	3 cut(s)	67, 642, 725
Hpy188I	TCNGA	1 cut(s)	427
Hpy188III	TCNNGA	2 cut(s)	350, 680
Hpy8I	GTNNAC	3 cut(s)	67, 642, 725
Hpy99I	CGWCG	1 cut(s)	475
HpyAV	CCTTC	2 cut(s)	507, 783
HpyCH4III	ACNGT	4 cut(s)	212, 498, 582, 722
HpyCH4IV	ACGT	5 cut(s)	87, 152, 222, 448, 477
HpyCH4V	TGCA	4 cut(s)	117, 463, 629, 637
HpyF10VI	GCNNNNNNNGC	2 cut(s)	321, 643
HpyF3I	CTNAG	3 cut(s)	203, 326, 785
HpySE526I	ACGT	5 cut(s)	87, 152, 222, 448, 477
Hsp92I	GRCGYC	1 cut(s)	570
Hsp92II	CATG	2 cut(s)	146, 674
HspAI	GCGC	1 cut(s)	570
KasI	GGCGCC	1 cut(s)	569
KspI	CCGCGG	1 cut(s)	292
Kzo9I	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
LmnI	GCTCC	2 cut(s)	285, 374
MaeI	CTAG	1 cut(s)	680
MaeII	ACGT	5 cut(s)	87, 152, 222, 448, 477
MaeIII	GTNAC	4 cut(s)	88, 212, 293, 478
MalI	GATC	6 cut(s)	22, 201, 258, 437, 489, 519
MboI	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
MboII	GAAGA	9 cut(s)	50, 69, 170, 172, 262, 405, 515, 624, 706
MflI	RGATCY	3 cut(s)	256, 435, 517
Mly113I	GGCGCC	1 cut(s)	570
MlyI	GAGTC	1 cut(s)	290
MnlI	CCTC	9 cut(s)	176, 206, 335, 365, 421, 426, 533, 597, 725
MspA1I	CMGCKG	1 cut(s)	291
MspR9I	CCNGG	2 cut(s)	363, 729
MvaI	CCWGG	2 cut(s)	363, 729
MvnI	CGCG	1 cut(s)	291
MwoI	GCNNNNNNNGC	2 cut(s)	321, 643
NarI	GGCGCC	1 cut(s)	570
NdeII	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
NlaIII	CATG	2 cut(s)	146, 674
NlaIV	GGNNCC	5 cut(s)	27, 258, 307, 437, 571
NmuCI	GTSAC	2 cut(s)	293, 478
NspV	TTCGAA	1 cut(s)	501
PcsI	WCGNNNNNNNCGW	1 cut(s)	483
PfeI	GAWTC	1 cut(s)	422
PfoI	TCCNGGA	1 cut(s)	361
PkrI	GCNGC	1 cut(s)	290
PleI	GAGTC	1 cut(s)	290
PluTI	GGCGCC	1 cut(s)	573
PpsI	GAGTC	1 cut(s)	290
PshAI	GACNNNNGTC	2 cut(s)	396, 476
Psp1406I	AACGTT	1 cut(s)	87
Psp6I	CCWGG	2 cut(s)	361, 727
PspGI	CCWGG	2 cut(s)	361, 727
PspN4I	GGNNCC	5 cut(s)	27, 258, 307, 437, 571
PspPI	GGNCC	2 cut(s)	25, 306
PsuI	RGATCY	3 cut(s)	256, 435, 517
RsaI	GTAC	5 cut(s)	66, 151, 389, 587, 643
RsaNI	GTAC	5 cut(s)	65, 150, 388, 586, 642
SacII	CCGCGG	1 cut(s)	292
SatI	GCNGC	1 cut(s)	289
Sau3AI	GATC	6 cut(s)	20, 199, 256, 435, 487, 517
Sau96I	GGNCC	2 cut(s)	25, 306
SchI	GAGTC	1 cut(s)	290
ScrFI	CCNGG	2 cut(s)	363, 729
SfoI	GGCGCC	1 cut(s)	571
Sfr303I	CCGCGG	1 cut(s)	292
SfuI	TTCGAA	1 cut(s)	501
SgrBI	CCGCGG	1 cut(s)	292
SinI	GGWCC	2 cut(s)	25, 306
SsiI	CCGC	2 cut(s)	289, 291
SspDI	GGCGCC	1 cut(s)	569
SspI	AATATT	1 cut(s)	13
SspMI	CTAG	1 cut(s)	680
StyD4I	CCNGG	2 cut(s)	361, 727
StyI	CCWWGG	3 cut(s)	127, 549, 573
TaaI	ACNGT	4 cut(s)	212, 498, 582, 722
TaiI	ACGT	5 cut(s)	90, 155, 225, 451, 480
TaqI	TCGA	2 cut(s)	198, 501
TaqII	GACCGA	1 cut(s)	13
TatI	WGTACW	1 cut(s)	64
TauI	GCSGC	1 cut(s)	291
TfiI	GAWTC	1 cut(s)	422
TscAI	CASTG	3 cut(s)	290, 597, 644
TseFI	GTSAC	2 cut(s)	293, 478
Tsp45I	GTSAC	2 cut(s)	293, 478
TspDTI	ATGAA	2 cut(s)	170, 713
TspRI	CASTG	3 cut(s)	290, 597, 644
VpaK11BI	GGWCC	2 cut(s)	25, 306
XbaI	TCTAGA	1 cut(s)	679
XspI	CTAG	1 cut(s)	680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.