Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Forward (+)

11082804 .. 11083816

Gene Structure 1013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G20630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 771 bp

ATGTCTTCAGTTTTTGGATCTGTCCATATCTTGGCCATGATAGCCATACAACTCCTCCTTACACACAGTGTTTCATCTCTGAACCTTACCAATGCGTATCTGCACCACAAATGCAGCAACACTCAAGGAAAATATAAGCAGGGGAGCGCGTTCGAGAAAAATCTCAACTTAGTCCTCAGTACCATCACCTCGATTGGAAATTTTCGTGACGGTTTCCGCTACACCGAAGAAGGTGAGGATCCCAATAACGTCTTTGTCATGTTCCAGTGTCGCGGCGACTCCTACTGGTCCAAGTGCCCCCCTTGCATTAGCACCGCCGTCTCTGGGCTTCGTAGGAGATGTCCAAGAAATAAGGGAGCAATAATATGGTATGACCAATGTCTTTTAAAGATATCTTCAGTTGCCTCCTTCAATAAGATAGATTATGAGAACGATTTCTATTTGTCCAACCCAAACAACATGAGTGATCGGGGGTTGTTCAACAAGGAGACGTCGGCTCTCCTGGAGAAGCTGGCATATAAAGCCTCCGATAGAAACAACTTGGATGGTAAACAATTGGTGTTGTACGCAGCAGGGGAGAAGAGAATTGGGACAAAGAAGGTGTATGCAATGGTGCAGTGTACGAAAGACTTAATATTTACAAAGTGCTTTGAGTGTTTGGAAGGGATTTTGAGGAAGTTTCCACAGTGTTGTGACGGTAAACGAGGAGGGAGAGTTTTCGGTACGAGCTGTAACTTTAGGTATGAGTTATATCCTTTTCTTAGAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

256

Amino Acids

29.02

Weight (kDa)

9.16

Isoelectric Point (pI)

41.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	37 - 132	6.9e-24	Salt stress response/antifungal
Stress-antifung	PF01657	152 - 250	6.6e-12	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	31
AccII	CGCG	2 cut(s)	149, 273
AciI	CCGC	3 cut(s)	217, 273, 315
AclWI	GGATC	3 cut(s)	25, 233, 246
AcoI	YGGCCR	1 cut(s)	33
AcsI	RAATTY	1 cut(s)	199
AcuI	CTGAAG	1 cut(s)	381
AcyI	GRCGYC	1 cut(s)	491
AdeI	CACNNNGTG	1 cut(s)	68
AfaI	GTAC	4 cut(s)	181, 566, 622, 724
AfiI	CCNNNNNNNGG	2 cut(s)	31, 324
AgsI	TTSAA	2 cut(s)	412, 481
AjnI	CCWGG	1 cut(s)	501
AluBI	AGCT	2 cut(s)	511, 729
AluI	AGCT	2 cut(s)	511, 729
Alw26I	GTCTC	2 cut(s)	325, 482
AlwI	GGATC	3 cut(s)	25, 233, 246
AoxI	GGCC	1 cut(s)	33
ApeKI	GCWGC	2 cut(s)	114, 569
ApoI	RAATTY	1 cut(s)	199
Asp700I	GAANNNNTTC	1 cut(s)	434
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	1 cut(s)	288
AsuHPI	GGTGA	2 cut(s)	178, 245
AvaII	GGWCC	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	299
BalI	TGGCCA	1 cut(s)	35
BamHI	GGATCC	1 cut(s)	238
BbvI	GCAGC	2 cut(s)	126, 581
BccI	CCATC	2 cut(s)	191, 539
BceAI	ACGGC	1 cut(s)	302
BciT130I	CCWGG	1 cut(s)	503
BcoDI	GTCTC	2 cut(s)	325, 482
BisI	GCNGC	3 cut(s)	115, 274, 570
BlsI	GCNGC	3 cut(s)	116, 275, 571
Bme1390I	CCNGG	1 cut(s)	503
Bme18I	GGWCC	1 cut(s)	288
BmgT120I	GGNCC	1 cut(s)	288
BmiI	GGNNCC	1 cut(s)	240
BmrFI	CCNGG	1 cut(s)	503
BoxI	GACNNNNGTC	1 cut(s)	378
BpmI	CTGGAG	1 cut(s)	524
BpuEI	CTTGAG	1 cut(s)	108
BsaHI	GRCGYC	1 cut(s)	491
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 699, 729
Bsc4I	CCNNNNNNNGG	2 cut(s)	31, 324
Bse1I	ACTGG	2 cut(s)	265, 290
Bse3DI	GCAATG	1 cut(s)	615
BseBI	CCWGG	1 cut(s)	503
BseGI	GGATG	1 cut(s)	550
BseLI	CCNNNNNNNGG	2 cut(s)	31, 324
BseMI	GCAATG	1 cut(s)	615
BseMII	CTCAG	1 cut(s)	190
BseNI	ACTGG	2 cut(s)	265, 290
BseRI	GAGGAG	2 cut(s)	44, 720
BseSI	GKGCMC	1 cut(s)	299
BseXI	GCAGC	2 cut(s)	126, 581
BsgI	GTGCAG	2 cut(s)	86, 635
Bsh1236I	CGCG	2 cut(s)	149, 273
BshFI	GGCC	1 cut(s)	35
BslFI	GGGAC	1 cut(s)	604
BslI	CCNNNNNNNGG	2 cut(s)	31, 324
BsmAI	GTCTC	2 cut(s)	325, 482
BsmBI	CGTCTC	2 cut(s)	325, 482
BsmFI	GGGAC	1 cut(s)	604
BsnI	GGCC	1 cut(s)	35
Bsp1286I	GDGCHC	1 cut(s)	299
Bsp143I	GATC	3 cut(s)	17, 238, 466
BspACI	CCGC	3 cut(s)	217, 273, 315
BspANI	GGCC	1 cut(s)	35
BspCNI	CTCAG	1 cut(s)	189
BspFNI	CGCG	2 cut(s)	149, 273
BspLI	GGNNCC	1 cut(s)	240
BspPI	GGATC	3 cut(s)	25, 233, 246
BsrDI	GCAATG	1 cut(s)	615
BsrI	ACTGG	2 cut(s)	265, 290
BssMI	GATC	3 cut(s)	17, 238, 466
BssNI	GRCGYC	1 cut(s)	491
Bst2UI	CCWGG	1 cut(s)	503
Bst4CI	ACNGT	4 cut(s)	68, 212, 687, 698
Bst6I	CTCTTC	1 cut(s)	575
BstACI	GRCGYC	1 cut(s)	491
BstC8I	GCNNGC	1 cut(s)	513
BstDEI	CTNAG	3 cut(s)	169, 176, 761
BstF5I	GGATG	1 cut(s)	550
BstFNI	CGCG	2 cut(s)	149, 273
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	3 cut(s)	20, 241, 469
BstMAI	GTCTC	2 cut(s)	325, 482
BstMBI	GATC	3 cut(s)	17, 238, 466
BstMWI	GCNNNNNNNGC	3 cut(s)	41, 303, 521
BstNI	CCWGG	1 cut(s)	503
BstPAI	GACNNNNGTC	1 cut(s)	378
BstSCI	CCNGG	1 cut(s)	501
BstSLI	GKGCMC	1 cut(s)	299
BstUI	CGCG	2 cut(s)	149, 273
BstV1I	GCAGC	2 cut(s)	126, 581
BstX2I	RGATCY	2 cut(s)	17, 238
BstYI	RGATCY	2 cut(s)	17, 238
BsuRI	GGCC	1 cut(s)	35
BtsCI	GGATG	1 cut(s)	550
BtsI	GCAGTG	1 cut(s)	623
BtsIMutI	CAGTG	4 cut(s)	73, 272, 623, 692
Cac8I	GCNNGC	1 cut(s)	513
CfoI	GCGC	1 cut(s)	149
Cfr13I	GGNCC	1 cut(s)	288
Csp6I	GTAC	4 cut(s)	180, 565, 621, 723
CviAII	CATG	3 cut(s)	37, 259, 460
CviJI	RGCY	7 cut(s)	35, 44, 328, 497, 511, 524, 729
CviKI_1	RGCY	7 cut(s)	35, 44, 328, 497, 511, 524, 729
CviQI	GTAC	4 cut(s)	180, 565, 621, 723
DdeI	CTNAG	3 cut(s)	169, 176, 761
DpnI	GATC	3 cut(s)	19, 240, 468
DpnII	GATC	3 cut(s)	17, 238, 466
DraI	TTTAAA	1 cut(s)	387
DraIII	CACNNNGTG	1 cut(s)	68
EaeI	YGGCCR	1 cut(s)	33
Eam1104I	CTCTTC	1 cut(s)	575
EarI	CTCTTC	1 cut(s)	575
Eco32I	GATATC	1 cut(s)	393
Eco47I	GGWCC	1 cut(s)	288
Eco57I	CTGAAG	1 cut(s)	381
EcoRII	CCWGG	1 cut(s)	501
EcoRV	GATATC	1 cut(s)	393
Esp3I	CGTCTC	2 cut(s)	325, 482
FaeI	CATG	3 cut(s)	40, 262, 463
FaqI	GGGAC	1 cut(s)	604
FatI	CATG	3 cut(s)	36, 258, 459
Fnu4HI	GCNGC	3 cut(s)	115, 274, 570
FokI	GGATG	1 cut(s)	557
Fsp4HI	GCNGC	3 cut(s)	115, 274, 570
GlaI	GCGC	1 cut(s)	148
GluI	GCNGC	3 cut(s)	115, 274, 570
GsuI	CTGGAG	1 cut(s)	524
HaeIII	GGCC	1 cut(s)	35
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	1 cut(s)	491
Hin1II	CATG	3 cut(s)	40, 262, 463
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HinfI	GANTC	1 cut(s)	278
HphI	GGTGA	2 cut(s)	178, 245
Hpy166II	GTNNAC	3 cut(s)	551, 621, 701
Hpy188I	TCNGA	2 cut(s)	81, 529
Hpy188III	TCNNGA	2 cut(s)	154, 206
Hpy8I	GTNNAC	3 cut(s)	551, 621, 701
Hpy99I	CGWCG	1 cut(s)	496
HpyAV	CCTTC	4 cut(s)	224, 418, 592, 656
HpyCH4III	ACNGT	4 cut(s)	68, 212, 687, 698
HpyCH4IV	ACGT	2 cut(s)	249, 491
HpyCH4V	TGCA	5 cut(s)	103, 114, 306, 608, 616
HpyF10VI	GCNNNNNNNGC	3 cut(s)	41, 303, 521
HpyF3I	CTNAG	3 cut(s)	169, 176, 761
HpySE526I	ACGT	2 cut(s)	249, 491
Hsp92I	GRCGYC	1 cut(s)	491
Hsp92II	CATG	3 cut(s)	40, 262, 463
HspAI	GCGC	1 cut(s)	147
Kzo9I	GATC	3 cut(s)	17, 238, 466
LmnI	GCTCC	2 cut(s)	144, 356
LpnPI	CCDG	8 cut(s)	125, 271, 278, 309, 488, 497, 515, 558
Lsp1109I	GCAGC	2 cut(s)	126, 581
MaeII	ACGT	2 cut(s)	249, 491
MaeIII	GTNAC	3 cut(s)	206, 692, 731
MalI	GATC	3 cut(s)	19, 240, 468
MboI	GATC	3 cut(s)	17, 238, 466
MboII	GAAGA	3 cut(s)	239, 387, 592
MfeI	CAATTG	1 cut(s)	554
MflI	RGATCY	2 cut(s)	17, 238
MhlI	GDGCHC	1 cut(s)	299
MlsI	TGGCCA	1 cut(s)	35
MluCI	AATT	3 cut(s)	199, 554, 585
MluNI	TGGCCA	1 cut(s)	35
MlyI	GAGTC	1 cut(s)	272
MmeI	TCCRAC	1 cut(s)	471
MnlI	CCTC	9 cut(s)	65, 185, 199, 229, 415, 535, 666, 698, 701
Mox20I	TGGCCA	1 cut(s)	35
MroXI	GAANNNNTTC	1 cut(s)	434
MscI	TGGCCA	1 cut(s)	35
MseI	TTAA	2 cut(s)	386, 632
Msp20I	TGGCCA	1 cut(s)	35
MspR9I	CCNGG	1 cut(s)	503
MunI	CAATTG	1 cut(s)	554
MvaI	CCWGG	1 cut(s)	503
MvnI	CGCG	2 cut(s)	149, 273
MwoI	GCNNNNNNNGC	3 cut(s)	41, 303, 521
NdeII	GATC	3 cut(s)	17, 238, 466
NlaIII	CATG	3 cut(s)	40, 262, 463
NlaIV	GGNNCC	1 cut(s)	240
NmuCI	GTSAC	2 cut(s)	206, 692
PdmI	GAANNNNTTC	1 cut(s)	434
PflMI	CCANNNNNTGG	1 cut(s)	31
PfoI	TCCNGGA	1 cut(s)	501
PkrI	GCNGC	3 cut(s)	116, 275, 571
PleI	GAGTC	1 cut(s)	272
PpsI	GAGTC	1 cut(s)	272
PshAI	GACNNNNGTC	1 cut(s)	378
Psp6I	CCWGG	1 cut(s)	501
PspGI	CCWGG	1 cut(s)	501
PspN4I	GGNNCC	1 cut(s)	240
PspPI	GGNCC	1 cut(s)	288
PsuI	RGATCY	2 cut(s)	17, 238
RsaI	GTAC	4 cut(s)	181, 566, 622, 724
RsaNI	GTAC	4 cut(s)	180, 565, 621, 723
SaqAI	TTAA	2 cut(s)	386, 632
SatI	GCNGC	3 cut(s)	115, 274, 570
Sau3AI	GATC	3 cut(s)	17, 238, 466
Sau96I	GGNCC	1 cut(s)	288
SchI	GAGTC	1 cut(s)	272
ScrFI	CCNGG	1 cut(s)	503
SduI	GDGCHC	1 cut(s)	299
SetI	ASST	9 cut(s)	87, 191, 235, 252, 494, 513, 603, 731, 743
SinI	GGWCC	1 cut(s)	288
SmlI	CTYRAG	1 cut(s)	123
SmoI	CTYRAG	1 cut(s)	123
Sse9I	AATT	3 cut(s)	199, 554, 585
SsiI	CCGC	3 cut(s)	217, 273, 315
SspI	AATATT	1 cut(s)	636
StyD4I	CCNGG	1 cut(s)	501
TaaI	ACNGT	4 cut(s)	68, 212, 687, 698
TaiI	ACGT	2 cut(s)	252, 494
TaqI	TCGA	2 cut(s)	153, 191
TasI	AATT	3 cut(s)	199, 554, 585
TauI	GCSGC	1 cut(s)	276
Tru1I	TTAA	2 cut(s)	386, 632
Tru9I	TTAA	2 cut(s)	386, 632
TscAI	CASTG	4 cut(s)	73, 272, 623, 692
TseFI	GTSAC	2 cut(s)	206, 692
TseI	GCWGC	2 cut(s)	114, 569
Tsp45I	GTSAC	2 cut(s)	206, 692
TspDTI	ATGAA	1 cut(s)	63
TspRI	CASTG	4 cut(s)	73, 272, 623, 692
Van91I	CCANNNNNTGG	1 cut(s)	31
VpaK11BI	GGWCC	1 cut(s)	288
XapI	RAATTY	1 cut(s)	199
XmnI	GAANNNNTTC	1 cut(s)	434
ZraI	GACGTC	1 cut(s)	492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.