Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Forward (+)

7717268 .. 7718405

Gene Structure 1138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G21910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 837 bp

ATGTACTCTTTATCTTCTGTATCAAAACACCTTATTTTGGTCCATATATTGGCCCTGGTGGCCACACAACTGCTTCTCATACGTAGCGTTTCGTCTTTGAACATGACCAATTCCTATCTGAACCACAAATGCTTTGTCAGTCAAGGGAAATACAAGCCAGGAAGTGCACATGAGAAAAGCCTAGAAGCTATCATCCATTCCATCTCGGTTGGTGAAAATGTTAATAGCGGTTACGACATGATGTCATTTGGTGACGGTCCAGATCTAGTCTGCGTTGTCCTCCAGTGCCGTGGTGACTCCTACGGGTCCAAGTGCCGCTCCTGCTTTGCCTCAGCCATGGCCGGGCTTCGTAGGAGATGTCCGAGATATAAAGGGGGAATAATATGGTTCGACCAATGTCTTCTCGAGATTTCTTCGATCGATAATGTAGGGCAGCTCAATTACGGTGATAGTTTCTGTATGTCCAACGCGAAGAATGTGGGAGATGATCCATTTTCTTTCATACTGAAGTGGGATACTCTCTTCGACAATATATCACGTATAGCTATCACTGAAAAGAATAAAAACTTAAAAGATACCAACAAACCGGCACTATACGGGGCGGGGGAGAAGAGGCTCGGGACAAAGAAGAAGATGTACGGAATGGTTCAGTGTACAGATGACTTATCTGTTAAGGCTTGTGAGGAGTGTCTGGTTGCTAATATCTTGAAGTTTCAAAATTGCTGGAAAAGTGGTAAACGCGGTGCGAGGGTTTTGGATAGGAGCTGTAACTTTAGGTATGAGCTTTACCCTTTTGTTAATGCCAAGACTGGTCCTAATTCTTATTTTAAGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

278

Amino Acids

31.0

Weight (kDa)

9.09

Isoelectric Point (pI)

48.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	44 - 138	7.9e-18	Salt stress response/antifungal
Stress-antifung	PF01657	153 - 262	1.5e-11	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	49
AccBSI	CCGCTC	1 cut(s)	318
AccII	CGCG	2 cut(s)	470, 741
AciI	CCGC	4 cut(s)	228, 316, 602, 741
AclWI	GGATC	1 cut(s)	482
AcoI	YGGCCR	2 cut(s)	60, 339
AcuI	CTGAAG	1 cut(s)	527
AfaI	GTAC	3 cut(s)	5, 638, 655
AfiI	CCNNNNNNNGG	3 cut(s)	37, 49, 342
AgsI	TTSAA	3 cut(s)	100, 709, 716
AhdI	GACNNNNNGTC	1 cut(s)	241
AjnI	CCWGG	2 cut(s)	54, 157
AluBI	AGCT	5 cut(s)	188, 436, 545, 765, 784
AluI	AGCT	5 cut(s)	188, 436, 545, 765, 784
Alw21I	GWGCWC	1 cut(s)	169
Alw44I	GTGCAC	1 cut(s)	165
AlwI	GGATC	1 cut(s)	482
Ama87I	CYCGRG	2 cut(s)	404, 617
AoxI	GGCC	3 cut(s)	51, 60, 339
ApaLI	GTGCAC	1 cut(s)	165
ApeKI	GCWGC	1 cut(s)	433
ArsI	GACNNNNNNTTYG	2 cut(s)	120, 152
AspS9I	GGNCC	5 cut(s)	40, 52, 257, 306, 812
AsuC2I	CCSGG	1 cut(s)	343
AsuHPI	GGTGA	4 cut(s)	224, 263, 305, 458
AvaI	CYCGRG	2 cut(s)	404, 617
AvaII	GGWCC	4 cut(s)	40, 257, 306, 812
BaeGI	GKGCMC	1 cut(s)	169
BalI	TGGCCA	1 cut(s)	62
BarI	GAAGNNNNNNTAC	2 cut(s)	620, 652
BbsI	GAAGAC	1 cut(s)	392
Bbv12I	GWGCWC	1 cut(s)	169
BbvCI	CCTCAGC	1 cut(s)	331
BbvI	GCAGC	1 cut(s)	445
BccI	CCATC	1 cut(s)	209
BceAI	ACGGC	1 cut(s)	273
BciT130I	CCWGG	2 cut(s)	56, 159
BciVI	GTATCC	1 cut(s)	508
BcnI	CCSGG	1 cut(s)	343
BfaI	CTAG	2 cut(s)	182, 266
BfuI	GTATCC	1 cut(s)	508
BglI	GCCNNNNNGGC	1 cut(s)	59
BglII	AGATCT	1 cut(s)	262
BisI	GCNGC	2 cut(s)	316, 434
BlsI	GCNGC	2 cut(s)	317, 435
Bme1390I	CCNGG	3 cut(s)	56, 159, 343
Bme18I	GGWCC	4 cut(s)	40, 257, 306, 812
BmeRI	GACNNNNNGTC	1 cut(s)	241
BmeT110I	CYCGRG	2 cut(s)	404, 617
BmgT120I	GGNCC	5 cut(s)	40, 52, 257, 306, 812
BmiI	GGNNCC	1 cut(s)	307
BmrFI	CCNGG	3 cut(s)	56, 159, 343
BoxI	GACNNNNGTC	1 cut(s)	396
BpiI	GAAGAC	1 cut(s)	392
BpmI	CTGGAG	1 cut(s)	266
Bpu10I	CCTNAGC	1 cut(s)	331
BpuMI	CCSGG	1 cut(s)	343
Bsa29I	ATCGAT	1 cut(s)	420
BsaAI	YACGTR	2 cut(s)	83, 539
BsaJI	CCNNGG	3 cut(s)	54, 289, 336
Bsc4I	CCNNNNNNNGG	3 cut(s)	37, 49, 342
Bse118I	RCCGGY	1 cut(s)	586
Bse1I	ACTGG	2 cut(s)	283, 814
BseBI	CCWGG	2 cut(s)	56, 159
BseCI	ATCGAT	1 cut(s)	420
BseDI	CCNNGG	3 cut(s)	54, 289, 336
BseGI	GGATG	1 cut(s)	192
BseLI	CCNNNNNNNGG	3 cut(s)	37, 49, 342
BseMII	CTCAG	1 cut(s)	345
BseNI	ACTGG	2 cut(s)	283, 814
BseRI	GAGGAG	1 cut(s)	698
BseSI	GKGCMC	1 cut(s)	169
BseXI	GCAGC	1 cut(s)	445
Bsh1236I	CGCG	2 cut(s)	470, 741
Bsh1285I	CGRYCG	1 cut(s)	420
BshFI	GGCC	3 cut(s)	53, 62, 341
BshVI	ATCGAT	1 cut(s)	420
BsiEI	CGRYCG	1 cut(s)	420
BsiHKAI	GWGCWC	1 cut(s)	169
BsiHKCI	CYCGRG	2 cut(s)	404, 617
BsiSI	CCGG	2 cut(s)	342, 587
BslFI	GGGAC	1 cut(s)	634
BslI	CCNNNNNNNGG	3 cut(s)	37, 49, 342
BsmFI	GGGAC	1 cut(s)	634
BsnI	GGCC	3 cut(s)	53, 62, 341
BsoBI	CYCGRG	2 cut(s)	404, 617
Bsp1286I	GDGCHC	1 cut(s)	169
Bsp1407I	TGTACA	1 cut(s)	653
Bsp143I	GATC	3 cut(s)	262, 417, 487
Bsp19I	CCATGG	1 cut(s)	336
BspACI	CCGC	4 cut(s)	228, 316, 602, 741
BspANI	GGCC	3 cut(s)	53, 62, 341
BspCNI	CTCAG	1 cut(s)	344
BspDI	ATCGAT	1 cut(s)	420
BspFNI	CGCG	2 cut(s)	470, 741
BspLI	GGNNCC	1 cut(s)	307
BspPI	GGATC	1 cut(s)	482
BsrBI	CCGCTC	1 cut(s)	318
BsrFI	RCCGGY	1 cut(s)	586
BsrGI	TGTACA	1 cut(s)	653
BsrI	ACTGG	2 cut(s)	283, 814
BssAI	RCCGGY	1 cut(s)	586
BssECI	CCNNGG	3 cut(s)	54, 289, 336
BssMI	GATC	3 cut(s)	262, 417, 487
BssT1I	CCWWGG	1 cut(s)	336
Bst2UI	CCWGG	2 cut(s)	56, 159
Bst4CI	ACNGT	2 cut(s)	257, 446
Bst6I	CTCTTC	2 cut(s)	527, 605
BstAUI	TGTACA	1 cut(s)	653
BstBAI	YACGTR	2 cut(s)	83, 539
BstDEI	CTNAG	1 cut(s)	331
BstDSI	CCRYGG	2 cut(s)	289, 336
BstF5I	GGATG	1 cut(s)	192
BstFNI	CGCG	2 cut(s)	470, 741
BstKTI	GATC	3 cut(s)	265, 420, 490
BstMBI	GATC	3 cut(s)	262, 417, 487
BstMCI	CGRYCG	1 cut(s)	420
BstMWI	GCNNNNNNNGC	2 cut(s)	59, 321
BstNI	CCWGG	2 cut(s)	56, 159
BstPAI	GACNNNNGTC	1 cut(s)	396
BstSCI	CCNGG	3 cut(s)	54, 157, 341
BstSLI	GKGCMC	1 cut(s)	169
BstSNI	TACGTA	1 cut(s)	83
BstUI	CGCG	2 cut(s)	470, 741
BstV1I	GCAGC	1 cut(s)	445
BstV2I	GAAGAC	1 cut(s)	392
BstX2I	RGATCY	1 cut(s)	262
BstXI	CCANNNNNNTGG	1 cut(s)	290
BstYI	RGATCY	1 cut(s)	262
Bsu15I	ATCGAT	1 cut(s)	420
BsuI	GTATCC	1 cut(s)	508
BsuRI	GGCC	3 cut(s)	53, 62, 341
BsuTUI	ATCGAT	1 cut(s)	420
BtgI	CCRYGG	2 cut(s)	289, 336
BtsCI	GGATG	1 cut(s)	192
BtsIMutI	CAGTG	3 cut(s)	290, 549, 656
Cfr10I	RCCGGY	1 cut(s)	586
Cfr13I	GGNCC	5 cut(s)	40, 52, 257, 306, 812
ClaI	ATCGAT	1 cut(s)	420
Csp6I	GTAC	3 cut(s)	4, 637, 654
CviAII	CATG	4 cut(s)	103, 170, 238, 337
CviQI	GTAC	3 cut(s)	4, 637, 654
DdeI	CTNAG	1 cut(s)	331
DpnI	GATC	3 cut(s)	264, 419, 489
DpnII	GATC	3 cut(s)	262, 417, 487
DriI	GACNNNNNGTC	1 cut(s)	241
EaeI	YGGCCR	2 cut(s)	60, 339
Eam1104I	CTCTTC	2 cut(s)	527, 605
Eam1105I	GACNNNNNGTC	1 cut(s)	241
EarI	CTCTTC	2 cut(s)	527, 605
Eco105I	TACGTA	1 cut(s)	83
Eco130I	CCWWGG	1 cut(s)	336
Eco47I	GGWCC	4 cut(s)	40, 257, 306, 812
Eco57I	CTGAAG	1 cut(s)	527
Eco88I	CYCGRG	2 cut(s)	404, 617
EcoRII	CCWGG	2 cut(s)	54, 157
EcoT14I	CCWWGG	1 cut(s)	336
ErhI	CCWWGG	1 cut(s)	336
FaeI	CATG	4 cut(s)	106, 173, 241, 340
FaqI	GGGAC	1 cut(s)	634
FatI	CATG	4 cut(s)	102, 169, 237, 336
FauI	CCCGC	1 cut(s)	595
Fnu4HI	GCNGC	2 cut(s)	316, 434
FokI	GGATG	1 cut(s)	179
Fsp4HI	GCNGC	2 cut(s)	316, 434
FspBI	CTAG	2 cut(s)	182, 266
GluI	GCNGC	2 cut(s)	316, 434
GsuI	CTGGAG	1 cut(s)	266
HaeIII	GGCC	3 cut(s)	53, 62, 341
HapII	CCGG	2 cut(s)	342, 587
Hin1II	CATG	4 cut(s)	106, 173, 241, 340
HinfI	GANTC	1 cut(s)	296
HpaII	CCGG	2 cut(s)	342, 587
HphI	GGTGA	4 cut(s)	224, 263, 305, 458
Hpy166II	GTNNAC	3 cut(s)	167, 654, 737
Hpy188I	TCNGA	2 cut(s)	120, 363
Hpy188III	TCNNGA	5 cut(s)	260, 404, 406, 619, 706
Hpy8I	GTNNAC	3 cut(s)	167, 654, 737
HpyCH4III	ACNGT	2 cut(s)	257, 446
HpyCH4IV	ACGT	2 cut(s)	82, 538
HpyCH4V	TGCA	1 cut(s)	167
HpyF10VI	GCNNNNNNNGC	2 cut(s)	59, 321
HpyF3I	CTNAG	1 cut(s)	331
HpySE526I	ACGT	2 cut(s)	82, 538
Hsp92II	CATG	4 cut(s)	106, 173, 241, 340
Kzo9I	GATC	3 cut(s)	262, 417, 487
LmnI	GCTCC	2 cut(s)	323, 762
Lsp1109I	GCAGC	1 cut(s)	445
MaeI	CTAG	2 cut(s)	182, 266
MaeII	ACGT	2 cut(s)	82, 538
MaeIII	GTNAC	4 cut(s)	230, 251, 293, 767
MalI	GATC	3 cut(s)	264, 419, 489
MbiI	CCGCTC	1 cut(s)	318
MboI	GATC	3 cut(s)	262, 417, 487
MboII	GAAGA	8 cut(s)	6, 392, 405, 484, 514, 622, 640, 643
MflI	RGATCY	1 cut(s)	262
MhlI	GDGCHC	1 cut(s)	169
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	4 cut(s)	109, 439, 718, 817
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	1 cut(s)	290
MmeI	TCCRAC	1 cut(s)	489
MnlI	CCTC	5 cut(s)	290, 340, 606, 676, 741
Mox20I	TGGCCA	1 cut(s)	62
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	6 cut(s)	222, 569, 672, 798, 828, 835
Msp20I	TGGCCA	1 cut(s)	62
MspI	CCGG	2 cut(s)	342, 587
MspR9I	CCNGG	3 cut(s)	56, 159, 343
MvaI	CCWGG	2 cut(s)	56, 159
MvnI	CGCG	2 cut(s)	470, 741
MwoI	GCNNNNNNNGC	2 cut(s)	59, 321
NciI	CCSGG	1 cut(s)	343
NcoI	CCATGG	1 cut(s)	336
NdeII	GATC	3 cut(s)	262, 417, 487
NlaIII	CATG	4 cut(s)	106, 173, 241, 340
NlaIV	GGNNCC	1 cut(s)	307
NmuCI	GTSAC	2 cut(s)	251, 293
PaeR7I	CTCGAG	1 cut(s)	404
PflMI	CCANNNNNTGG	1 cut(s)	49
PkrI	GCNGC	2 cut(s)	317, 435
Ple19I	CGATCG	1 cut(s)	420
PleI	GAGTC	1 cut(s)	290
PpsI	GAGTC	1 cut(s)	290
Ppu21I	YACGTR	2 cut(s)	83, 539
PshAI	GACNNNNGTC	1 cut(s)	396
Psp6I	CCWGG	2 cut(s)	54, 157
PspGI	CCWGG	2 cut(s)	54, 157
PspN4I	GGNNCC	1 cut(s)	307
PspPI	GGNCC	5 cut(s)	40, 52, 257, 306, 812
PsuI	RGATCY	1 cut(s)	262
PvuI	CGATCG	1 cut(s)	420
RsaI	GTAC	3 cut(s)	5, 638, 655
RsaNI	GTAC	3 cut(s)	4, 637, 654
SaqAI	TTAA	6 cut(s)	222, 569, 672, 798, 828, 835
SatI	GCNGC	2 cut(s)	316, 434
Sau3AI	GATC	3 cut(s)	262, 417, 487
Sau96I	GGNCC	5 cut(s)	40, 52, 257, 306, 812
SchI	GAGTC	1 cut(s)	290
ScrFI	CCNGG	3 cut(s)	56, 159, 343
SduI	GDGCHC	1 cut(s)	169
SetI	ASST	9 cut(s)	33, 85, 190, 438, 541, 547, 767, 779, 786
SfiI	GGCCNNNNNGGCC	1 cut(s)	59
Sfr274I	CTCGAG	1 cut(s)	404
SinI	GGWCC	4 cut(s)	40, 257, 306, 812
SlaI	CTCGAG	1 cut(s)	404
SmlI	CTYRAG	1 cut(s)	404
SmoI	CTYRAG	1 cut(s)	404
SnaBI	TACGTA	1 cut(s)	83
Sse9I	AATT	4 cut(s)	109, 439, 718, 817
SsiI	CCGC	4 cut(s)	228, 316, 602, 741
SspMI	CTAG	2 cut(s)	182, 266
StyD4I	CCNGG	3 cut(s)	54, 157, 341
StyI	CCWWGG	1 cut(s)	336
TaaI	ACNGT	2 cut(s)	257, 446
TaiI	ACGT	2 cut(s)	85, 541
TaqI	TCGA	5 cut(s)	390, 405, 416, 420, 525
TasI	AATT	4 cut(s)	109, 439, 718, 817
TatI	WGTACW	2 cut(s)	3, 653
TauI	GCSGC	1 cut(s)	318
Tru1I	TTAA	6 cut(s)	222, 569, 672, 798, 828, 835
Tru9I	TTAA	6 cut(s)	222, 569, 672, 798, 828, 835
TscAI	CASTG	3 cut(s)	290, 556, 656
TseFI	GTSAC	2 cut(s)	251, 293
TseI	GCWGC	1 cut(s)	433
Tsp45I	GTSAC	2 cut(s)	251, 293
TspDTI	ATGAA	1 cut(s)	490
TspGWI	ACGGA	1 cut(s)	654
TspRI	CASTG	3 cut(s)	290, 556, 656
Van91I	CCANNNNNTGG	1 cut(s)	49
VneI	GTGCAC	1 cut(s)	165
VpaK11BI	GGWCC	4 cut(s)	40, 257, 306, 812
XhoI	CTCGAG	1 cut(s)	404
XspI	CTAG	2 cut(s)	182, 266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.